Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001955-TA|BGIBMGA001955-PA|IPR007757|MT-A70
(158 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17) 59 1e-09
SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048) 31 0.58
SB_40095| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.0
SB_40848| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_3504| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.3
SB_28534| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 3.1
SB_709| Best HMM Match : RVT_1 (HMM E-Value=0.0021) 28 4.1
SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32) 27 5.4
SB_10069| Best HMM Match : VWC (HMM E-Value=2.4) 27 7.1
SB_37027| Best HMM Match : VWC (HMM E-Value=2.4) 27 7.1
SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 9.4
SB_48855| Best HMM Match : Amidohydro_3 (HMM E-Value=0.2) 27 9.4
SB_35016| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8) 27 9.4
SB_2005| Best HMM Match : Amidohydro_3 (HMM E-Value=2.38221e-44) 27 9.4
>SB_15701| Best HMM Match : MT-A70 (HMM E-Value=1.6e-17)
Length = 1178
Score = 59.3 bits (137), Expect = 1e-09
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 9 AIPLSNLLSSNCLVAVWCTNSPANIQAVKNLIFRNWGVRYVASWHWLKVAVDLSPICPFG 68
A+P+ L++ L+AVW TN I+ ++ + +WGV +A WHW+KV +
Sbjct: 12 ALPVPELIAPGGLLAVWVTNKAKYIRFTRSELLPSWGVDVIAEWHWIKVTKTGEYVVGM- 70
Query: 69 TGSTKQPYEMLIIGK 83
+ K+PYE LIIG+
Sbjct: 71 ESAHKKPYETLIIGR 85
Score = 53.6 bits (123), Expect = 7e-08
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 85 GSVAPIPDGQLIVSIPSALHSHKPPLLDLLKPYINKEQPRILELFARYLLPNTTSVG 141
G V +P+ Q+I S+P HS KPPL D+ K ++ + P LE+FAR L P TS G
Sbjct: 132 GGVKQVPEHQVICSVPCLKHSRKPPLGDVFKDFLPR-HPHCLEMFARNLTPGWTSWG 187
>SB_16955| Best HMM Match : SLAP (HMM E-Value=0.048)
Length = 1952
Score = 30.7 bits (66), Expect = 0.58
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 57 VAVDLSP-ICPFGTGSTKQPYEMLIIGKVGSVAPIPDG 93
+AV+ +P I P G+T YE + + S++P P+G
Sbjct: 447 IAVNATPTISPSPNGTTSSVYETIAVNSTSSISPSPNG 484
Score = 30.3 bits (65), Expect = 0.76
Identities = 13/38 (34%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 57 VAVDLSP-ICPFGTGSTKQPYEMLIIGKVGSVAPIPDG 93
+AV+ +P I P G+T YE + + S++P P+G
Sbjct: 401 IAVNSTPSISPSPNGTTSSVYETIAVNSTSSISPSPNG 438
Score = 28.7 bits (61), Expect = 2.3
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 62 SPICPFGTGSTKQPYEMLIIGKVGSVAPIPDG 93
S I P G+T YE + + S++P P+G
Sbjct: 361 SSISPSPNGTTSSVYETITVNSTSSISPSPNG 392
Score = 28.7 bits (61), Expect = 2.3
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 57 VAVDLSPICPFGTGST-KQPYEMLIIGKVGSVAPIPDG 93
+AV+ +P T T PYE + + S++P P+G
Sbjct: 769 IAVNATPSISLSTNETASSPYETIAVNSTPSISPSPNG 806
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 62 SPICPFGTGSTKQPYEMLIIGKVGSVAPIPDG 93
S I P G+T YE + + S++P P+G
Sbjct: 384 SSISPSPNGTTSSVYETIAVNSTPSISPSPNG 415
Score = 27.9 bits (59), Expect = 4.1
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 62 SPICPFGTGSTKQPYEMLIIGKVGSVAPIPDG 93
S I P G+T YE + + S++P P+G
Sbjct: 476 SSISPSPNGTTSSVYETIAVNSTPSISPSPNG 507
Score = 27.9 bits (59), Expect = 4.1
Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)
Query: 57 VAVDLSP-ICPFGTGSTKQPYEMLIIGKVGSVAPIPDG 93
+AV+ +P I P G+T YE + + +++P P+G
Sbjct: 562 IAVNSTPSISPSPNGTTSSVYETIAVNATPTISPSPNG 599
Score = 27.5 bits (58), Expect = 5.4
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Query: 57 VAVDLSPICPFG-TGSTKQPYEMLIIGKVGSVAPIPDG 93
VAV+ +P G+T YE + + S++P P+G
Sbjct: 332 VAVNATPTISLSLNGTTSSVYETIAVNSTSSISPSPNG 369
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 57 VAVDLSP-ICPFGTGSTKQPYEMLIIGKVGSVAPIPDG 93
+AV+ +P I P G+T YE + + ++P P+G
Sbjct: 585 IAVNATPTISPSPNGTTSSVYETIAVNATPIISPSPNG 622
Score = 27.1 bits (57), Expect = 7.1
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 57 VAVDLSPIC-PFGTGSTKQPYEMLIIGKVGSVAPIPDG 93
+AV+ +PI P G+T YE + + ++P P+G
Sbjct: 608 IAVNATPIISPSPNGTTSSVYETIAVNATPIISPSPNG 645
Score = 26.6 bits (56), Expect = 9.4
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Query: 57 VAVDLSP-ICPFGTGSTKQPYEMLIIGKVGSVAPIPDG 93
+AV+ +P I P +T YE + + S++P P+G
Sbjct: 539 IAVNATPTISPSPNETTSSVYETIAVNSTPSISPSPNG 576
Score = 26.6 bits (56), Expect = 9.4
Identities = 14/45 (31%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 50 ASWHWLKVAVDLSP-ICPFGTGSTKQPYEMLIIGKVGSVAPIPDG 93
AS + +AV+ +P I P +T YE + + S++P P+G
Sbjct: 670 ASSPYETIAVNATPTIYPSPNRTTSSMYETIAVNSTPSISPSPNG 714
>SB_40095| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 789
Score = 29.9 bits (64), Expect = 1.0
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 9/104 (8%)
Query: 54 WLKVAVD-LSPICPFGTGSTKQPYEMLIIGKVGSVAPIPDGQLIVSIPSALHSHKPPLLD 112
++ +AV+ + I P +T YE + + +++P P+G S+ + + P
Sbjct: 493 YVTIAVNSTTSISPSLNETTSSAYETIAVNATPTISPSPNG-TTSSLYETIDVNATP--- 548
Query: 113 LLKPYINKEQPRILELFARYLLPNTTSVGYEPLKWQHISLYETV 156
+ P +N+ E A P + V KW + S YET+
Sbjct: 549 TISPSLNETTSSAYETIAVNATPTISPV----TKWDNYSAYETI 588
>SB_40848| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 205
Score = 28.7 bits (61), Expect = 2.3
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Query: 2 MYNEDIAAIPLSNLLSSNCLVAVWCTNSPANIQAVKNLIFRNWGVRYVASWHWLKVAVDL 61
+Y D+ +I + S N + C N ++A N + R VR + + WLKV D+
Sbjct: 67 LYERDMMSIQCTTSASGNGTESATC-NVGNPLKAATNRVTRG-KVRVLKGFSWLKVCTDI 124
Query: 62 SPI 64
I
Sbjct: 125 KDI 127
>SB_3504| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 164
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 89 PIPDGQLIVSIPSA--LHSHKPPLLDLLKPYINKEQPRILELFARYLLPNTTSVGYEP 144
P+P G L +S+PS+ HS K + LL P ELF+ L SV + P
Sbjct: 26 PMPSGNLCLSVPSSNETHSCKAFMAGLLSFNATSFNPNKEELFSYILKLFDRSVDFAP 83
>SB_248| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2656
Score = 28.7 bits (61), Expect = 2.3
Identities = 13/28 (46%), Positives = 18/28 (64%)
Query: 89 PIPDGQLIVSIPSALHSHKPPLLDLLKP 116
P+P GQ IV+ P+A + +PP L KP
Sbjct: 289 PLPLGQSIVNKPTASRTARPPATILSKP 316
>SB_28534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 466
Score = 28.3 bits (60), Expect = 3.1
Identities = 14/45 (31%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 91 PDGQLIVSIPSALHSHKPPLLDL-LKPYINKEQPRILELFARYLL 134
P+ L + + + H L DL LKP+ NK++PR + +F + ++
Sbjct: 400 PEMVLDLVVEPGMSDHDLVLFDLNLKPFFNKKKPRKVFVFKKVMV 444
>SB_6824| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1152
Score = 28.3 bits (60), Expect = 3.1
Identities = 16/47 (34%), Positives = 24/47 (51%), Gaps = 1/47 (2%)
Query: 100 PSALHSHKPPLLDLLKPYINK-EQPRILELFARYLLPNTTSVGYEPL 145
PS KP + +L+KP IN+ +P I EL ++ + G PL
Sbjct: 670 PSIYELSKPSVFELIKPSINELSKPSIFELSKPFIYEDAGLDGGVPL 716
>SB_2606| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1352
Score = 28.3 bits (60), Expect = 3.1
Identities = 13/66 (19%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 63 PICPFGTGSTKQPYEMLIIGKVGSVAPIPDGQLIVSIPSALHSHKPPLLDLLKPYINKEQ 122
P C +G + Q +E++ V+ +PD ++ P+ K P+ ++ + + +
Sbjct: 491 PFCQYGNSAVNQSFEVVSSVSFIDVSKLPDARV---KPTPTFEAKAPIEEVFEKRLRRLS 547
Query: 123 PRILEL 128
P ++E+
Sbjct: 548 PWVVEM 553
>SB_709| Best HMM Match : RVT_1 (HMM E-Value=0.0021)
Length = 921
Score = 27.9 bits (59), Expect = 4.1
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 103 LHSHKPPLLDLLKPYINKEQPRILELFARYLLPNTTSVGYEPLKWQHIS 151
+HS PL + ++ PR+ + R L P ++ Y P K HI+
Sbjct: 833 VHSDHKPLESIHLKHLTSAPPRLQRMLQRRLQPYDFTIKYIPGKDMHIA 881
>SB_19427| Best HMM Match : RVT_1 (HMM E-Value=7.5e-32)
Length = 698
Score = 27.5 bits (58), Expect = 5.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 91 PDGQLIVSIPSALHSHKPPLLDL-LKPYINKEQPRILELFAR 131
P+ L + + S + H L DL LKP NK++PR + +F +
Sbjct: 162 PEMVLDLVVESGMSDHDLVLFDLNLKPSFNKKKPRKVFVFKK 203
>SB_10069| Best HMM Match : VWC (HMM E-Value=2.4)
Length = 289
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 88 APIPDGQLIVSIPSALHSHKPPLLDLLKPYINKEQPRILELFARYLLPNT 137
A +P ++ I LH P + LL E P +L+ LLP+T
Sbjct: 140 AVLPSTRICSIIVRVLHCRAPEYVRLLYECCTAEHPNMLDYCTSTLLPST 189
>SB_37027| Best HMM Match : VWC (HMM E-Value=2.4)
Length = 289
Score = 27.1 bits (57), Expect = 7.1
Identities = 15/50 (30%), Positives = 22/50 (44%)
Query: 88 APIPDGQLIVSIPSALHSHKPPLLDLLKPYINKEQPRILELFARYLLPNT 137
A +P ++ I LH P + LL E P +L+ LLP+T
Sbjct: 140 AVLPSTRICSIIVRVLHCRAPEYVRLLYECCTAEHPNMLDYCTSTLLPST 189
>SB_42244| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 870
Score = 26.6 bits (56), Expect = 9.4
Identities = 8/19 (42%), Positives = 14/19 (73%)
Query: 106 HKPPLLDLLKPYINKEQPR 124
H+P +D+++ YINK P+
Sbjct: 849 HRPRCVDIIQKYINKRNPK 867
>SB_48855| Best HMM Match : Amidohydro_3 (HMM E-Value=0.2)
Length = 391
Score = 26.6 bits (56), Expect = 9.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 55 LKVAVDLSPICPFGTGSTKQPYEMLIIGKVGSVAPIPDGQLIVSIPSALH 104
+K+ D SP C GT PY + K+ S P P L++ P L+
Sbjct: 293 IKLVADGSPHC--GTAGIVDPYLDSEMTKILSFPPPPSNGLVLHTPENLY 340
>SB_35016| Best HMM Match : Exo_endo_phos (HMM E-Value=1.8)
Length = 412
Score = 26.6 bits (56), Expect = 9.4
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 91 PDGQLIVSIPSALHSHKPPLLDL-LKPYINKEQPRILELFAR 131
P+ L + + + H L DL LKP NK++PR + LF +
Sbjct: 211 PEMVLDLVVEPGMSDHDLVLFDLNLKPSFNKKKPRKVFLFKK 252
>SB_2005| Best HMM Match : Amidohydro_3 (HMM E-Value=2.38221e-44)
Length = 572
Score = 26.6 bits (56), Expect = 9.4
Identities = 16/50 (32%), Positives = 23/50 (46%), Gaps = 2/50 (4%)
Query: 55 LKVAVDLSPICPFGTGSTKQPYEMLIIGKVGSVAPIPDGQLIVSIPSALH 104
+K+ D SP C GT PY + K+ S P P L++ P L+
Sbjct: 293 IKLVADGSPHC--GTAGIVDPYLDSEMTKILSFPPPPSNGLVLHTPENLY 340
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.321 0.137 0.437
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,711,418
Number of Sequences: 59808
Number of extensions: 231609
Number of successful extensions: 473
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 425
Number of HSP's gapped (non-prelim): 63
length of query: 158
length of database: 16,821,457
effective HSP length: 77
effective length of query: 81
effective length of database: 12,216,241
effective search space: 989515521
effective search space used: 989515521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 56 (26.6 bits)
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