GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001955-TA|BGIBMGA001955-PA|IPR007757|MT-A70
         (158 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.             25   0.85 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    24   2.6  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    23   6.0  

>U43499-1|AAA93302.1|  278|Anopheles gambiae a-emp protein.
          Length = 278

 Score = 25.4 bits (53), Expect = 0.85
 Identities = 16/43 (37%), Positives = 20/43 (46%)

Query: 97  VSIPSALHSHKPPLLDLLKPYINKEQPRILELFARYLLPNTTS 139
           VS+   L  ++ PLL L K    KEQ    E F      N+TS
Sbjct: 92  VSVGQLLWGYEDPLLKLAKDVFPKEQKLPCEEFGLMYGKNSTS 134


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 23.8 bits (49), Expect = 2.6
 Identities = 11/18 (61%), Positives = 13/18 (72%), Gaps = 1/18 (5%)

Query: 107 KPPLLDLLKPYINKEQPR 124
           +PPL   LK +INKE PR
Sbjct: 426 RPPL-HALKDFINKEPPR 442


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 22.6 bits (46), Expect = 6.0
 Identities = 8/23 (34%), Positives = 11/23 (47%)

Query: 10  IPLSNLLSSNCLVAVWCTNSPAN 32
           +P  N    NC+ +  C   PAN
Sbjct: 488 VPTKNASFRNCVTSAACVLGPAN 510


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.321    0.137    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 178,172
Number of Sequences: 2123
Number of extensions: 7331
Number of successful extensions: 8
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 3
length of query: 158
length of database: 516,269
effective HSP length: 59
effective length of query: 99
effective length of database: 391,012
effective search space: 38710188
effective search space used: 38710188
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 45 (22.2 bits)