SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001955-TA|BGIBMGA001955-PA|IPR007757|MT-A70
         (158 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC111020-1|AAI11021.1|  472|Homo sapiens methyltransferase like ...   126   5e-29
BC042142-1|AAH42142.1|  481|Homo sapiens ALDH16A1 protein protein.     31   1.8  
BC035641-1|AAH35641.1|  216|Homo sapiens ALDH16A1 protein protein.     31   1.8  
BC014895-1|AAH14895.2|  802|Homo sapiens aldehyde dehydrogenase ...    31   1.8  
AK026670-1|BAB15520.1|  205|Homo sapiens protein ( Homo sapiens ...    30   3.1  
BC117245-1|AAI17246.1|  472|Homo sapiens doublesex and mab-3 rel...    30   4.1  
BC113584-1|AAI13585.1|  472|Homo sapiens doublesex and mab-3 rel...    30   4.1  
AL136365-2|CAB99336.1|  472|Homo sapiens doublesex and mab-3 rel...    30   4.1  
AF193873-1|AAF78892.1|  343|Homo sapiens testis-specific protein...    30   4.1  
CR457333-1|CAG33614.1|  305|Homo sapiens REC14 protein.                29   5.4  
BC064584-1|AAH64584.1|  598|Homo sapiens XRRA1 protein protein.        29   5.4  
BC010080-1|AAH10080.1|  305|Homo sapiens WD repeat domain 61 pro...    29   5.4  
AK024754-1|BAB14986.1|  305|Homo sapiens protein ( Homo sapiens ...    29   5.4  
AF309553-1|AAG31639.1|  305|Homo sapiens meiotic recombination p...    29   5.4  
AF100786-1|AAP97225.1|  305|Homo sapiens G protein beta subunit-...    29   5.4  
AK074152-1|BAB84978.1|  402|Homo sapiens FLJ00225 protein protein.     29   7.2  

>BC111020-1|AAI11021.1|  472|Homo sapiens methyltransferase like 4
           protein.
          Length = 472

 Score =  126 bits (303), Expect = 5e-29
 Identities = 67/159 (42%), Positives = 92/159 (57%), Gaps = 14/159 (8%)

Query: 7   IAAIPLSNLLSSNCLVAVWCTNSPANIQAVKNLIFRNWGVRYVASWHWLKVAVDLSPICP 66
           I  IP+  L + NCL+  W TN   +++ +K  ++ +W V  VA WHW+K+      + P
Sbjct: 309 IKQIPIPKLAAPNCLLVTWVTNRQKHLRFIKEELYPSWSVEVVAEWHWVKITNSGEFVFP 368

Query: 67  FGTGSTKQPYEMLIIGKVG------------SVAPIPDGQLIVSIPSALHSHKPPLLDLL 114
             +   K+PYE LI+G+V             +V PIPD +LIVS+P  LHSHKPPL ++L
Sbjct: 369 LDS-PHKKPYEGLILGRVQEKTALPLRNADVNVLPIPDHKLIVSVPCTLHSHKPPLAEVL 427

Query: 115 KPYINKEQPRILELFARYLLPNTTSVGYEPLKWQHISLY 153
           K YI K     LELFAR L P  TS G E LK+QH+  +
Sbjct: 428 KDYI-KPDGEYLELFARNLQPGWTSWGNEVLKFQHVDYF 465


>BC042142-1|AAH42142.1|  481|Homo sapiens ALDH16A1 protein protein.
          Length = 481

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 42  RNWGVRYVASWHWLKVAVDLSPIC----PFGTGSTKQPYEMLIIGKVGSVAP-IPDGQLI 96
           R WG R  A  H L+VA    P+     P G  +   P E  ++  V  +AP +  G  +
Sbjct: 311 RAWGARVQAQGHTLQVAGLRGPVLRLREPLGVLAVVCPDEWPLLAFVSLLAPALAYGNTV 370

Query: 97  VSIPSA 102
           V +PSA
Sbjct: 371 VMVPSA 376


>BC035641-1|AAH35641.1|  216|Homo sapiens ALDH16A1 protein protein.
          Length = 216

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 42  RNWGVRYVASWHWLKVAVDLSPIC----PFGTGSTKQPYEMLIIGKVGSVAP-IPDGQLI 96
           R WG R  A  H L+VA    P+     P G  +   P E  ++  V  +AP +  G  +
Sbjct: 46  RAWGARVQAQGHTLQVAGLRGPVLRLREPLGVLAVVCPDEWPLLAFVSLLAPALAYGNTV 105

Query: 97  VSIPSA 102
           V +PSA
Sbjct: 106 VMVPSA 111


>BC014895-1|AAH14895.2|  802|Homo sapiens aldehyde dehydrogenase 16
           family, member A1 protein.
          Length = 802

 Score = 31.1 bits (67), Expect = 1.8
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 5/66 (7%)

Query: 42  RNWGVRYVASWHWLKVAVDLSPIC----PFGTGSTKQPYEMLIIGKVGSVAP-IPDGQLI 96
           R WG R  A  H L+VA    P+     P G  +   P E  ++  V  +AP +  G  +
Sbjct: 632 RAWGARVQAQGHTLQVAGLRGPVLRLREPLGVLAVVCPDEWPLLAFVSLLAPALAYGNTV 691

Query: 97  VSIPSA 102
           V +PSA
Sbjct: 692 VMVPSA 697


>AK026670-1|BAB15520.1|  205|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ23017 fis, clone LNG00879. ).
          Length = 205

 Score = 30.3 bits (65), Expect = 3.1
 Identities = 11/31 (35%), Positives = 18/31 (58%)

Query: 7   IAAIPLSNLLSSNCLVAVWCTNSPANIQAVK 37
           I  IP+  L + NCL+  W TN   +++ +K
Sbjct: 162 IQQIPIPKLAAPNCLLVTWVTNRQKHLRFIK 192


>BC117245-1|AAI17246.1|  472|Homo sapiens doublesex and mab-3
           related transcription factor 3 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 97  VSIPSALHSHKPPLLDLLKPYINKEQPRILELFAR 131
           VS+P +L +++PP L++LK     ++P +LEL  +
Sbjct: 239 VSLPFSLKANRPP-LEVLKKIFPNQKPTVLELILK 272


>BC113584-1|AAI13585.1|  472|Homo sapiens doublesex and mab-3
           related transcription factor 3 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 97  VSIPSALHSHKPPLLDLLKPYINKEQPRILELFAR 131
           VS+P +L +++PP L++LK     ++P +LEL  +
Sbjct: 239 VSLPFSLKANRPP-LEVLKKIFPNQKPTVLELILK 272


>AL136365-2|CAB99336.1|  472|Homo sapiens doublesex and mab-3
           related transcription factor 3 protein.
          Length = 472

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 97  VSIPSALHSHKPPLLDLLKPYINKEQPRILELFAR 131
           VS+P +L +++PP L++LK     ++P +LEL  +
Sbjct: 239 VSLPFSLKANRPP-LEVLKKIFPNQKPTVLELILK 272


>AF193873-1|AAF78892.1|  343|Homo sapiens testis-specific protein
           protein.
          Length = 343

 Score = 29.9 bits (64), Expect = 4.1
 Identities = 13/35 (37%), Positives = 24/35 (68%), Gaps = 1/35 (2%)

Query: 97  VSIPSALHSHKPPLLDLLKPYINKEQPRILELFAR 131
           VS+P +L +++PP L++LK     ++P +LEL  +
Sbjct: 110 VSLPFSLKANRPP-LEVLKKIFPNQKPTVLELILK 143


>CR457333-1|CAG33614.1|  305|Homo sapiens REC14 protein.
          Length = 305

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 10  IPLSNLLSSNCLVAVWCTNSPANIQAVKNLIFRNWGVRYVASWHWLKVAVDLSPICPFGT 69
           +P++   S +  + +W   +   I+++       W + +     +L     +  +  FG 
Sbjct: 76  LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 135

Query: 70  GSTKQPYEMLIIGK-VGSVAPIPDGQLIVS 98
            S K+ Y +   GK + S+A  PDG+ + S
Sbjct: 136 ESGKKEYSLDTRGKFILSIAYSPDGKYLAS 165


>BC064584-1|AAH64584.1|  598|Homo sapiens XRRA1 protein protein.
          Length = 598

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 15/33 (45%), Positives = 21/33 (63%), Gaps = 1/33 (3%)

Query: 94  QLIVSIPSALHSHKPPLLDLLKPYINKEQPRIL 126
           Q ++  P   HS KP L  L KPY++KE+ R+L
Sbjct: 557 QQMLKHPLLCHSSKPKLDTLQKPYVHKEK-RVL 588


>BC010080-1|AAH10080.1|  305|Homo sapiens WD repeat domain 61
           protein.
          Length = 305

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 10  IPLSNLLSSNCLVAVWCTNSPANIQAVKNLIFRNWGVRYVASWHWLKVAVDLSPICPFGT 69
           +P++   S +  + +W   +   I+++       W + +     +L     +  +  FG 
Sbjct: 76  LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 135

Query: 70  GSTKQPYEMLIIGK-VGSVAPIPDGQLIVS 98
            S K+ Y +   GK + S+A  PDG+ + S
Sbjct: 136 ESGKKEYSLDTRGKFILSIAYSPDGKYLAS 165


>AK024754-1|BAB14986.1|  305|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ21101 fis, clone CAS04682. ).
          Length = 305

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 10  IPLSNLLSSNCLVAVWCTNSPANIQAVKNLIFRNWGVRYVASWHWLKVAVDLSPICPFGT 69
           +P++   S +  + +W   +   I+++       W + +     +L     +  +  FG 
Sbjct: 76  LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 135

Query: 70  GSTKQPYEMLIIGK-VGSVAPIPDGQLIVS 98
            S K+ Y +   GK + S+A  PDG+ + S
Sbjct: 136 ESGKKEYSLDTRGKFILSIAYSPDGKYLAS 165


>AF309553-1|AAG31639.1|  305|Homo sapiens meiotic recombination
           protein REC14 protein.
          Length = 305

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 10  IPLSNLLSSNCLVAVWCTNSPANIQAVKNLIFRNWGVRYVASWHWLKVAVDLSPICPFGT 69
           +P++   S +  + +W   +   I+++       W + +     +L     +  +  FG 
Sbjct: 76  LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 135

Query: 70  GSTKQPYEMLIIGK-VGSVAPIPDGQLIVS 98
            S K+ Y +   GK + S+A  PDG+ + S
Sbjct: 136 ESGKKEYSLDTRGKFILSIAYSPDGKYLAS 165


>AF100786-1|AAP97225.1|  305|Homo sapiens G protein beta
           subunit-like protein protein.
          Length = 305

 Score = 29.5 bits (63), Expect = 5.4
 Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 1/90 (1%)

Query: 10  IPLSNLLSSNCLVAVWCTNSPANIQAVKNLIFRNWGVRYVASWHWLKVAVDLSPICPFGT 69
           +P++   S +  + +W   +   I+++       W + +     +L     +  +  FG 
Sbjct: 76  LPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGV 135

Query: 70  GSTKQPYEMLIIGK-VGSVAPIPDGQLIVS 98
            S K+ Y +   GK + S+A  PDG+ + S
Sbjct: 136 ESGKKEYSLDTRGKFILSIAYSPDGKYLAS 165


>AK074152-1|BAB84978.1|  402|Homo sapiens FLJ00225 protein protein.
          Length = 402

 Score = 29.1 bits (62), Expect = 7.2
 Identities = 13/29 (44%), Positives = 18/29 (62%)

Query: 94  QLIVSIPSALHSHKPPLLDLLKPYINKEQ 122
           Q ++  P   HS KP L  L KPY++KE+
Sbjct: 254 QQMLKHPLLCHSSKPKLDTLQKPYVHKEK 282


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.137    0.437 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,590,331
Number of Sequences: 224733
Number of extensions: 1129291
Number of successful extensions: 1660
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1652
Number of HSP's gapped (non-prelim): 17
length of query: 158
length of database: 73,234,838
effective HSP length: 84
effective length of query: 74
effective length of database: 54,357,266
effective search space: 4022437684
effective search space used: 4022437684
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)

- SilkBase 1999-2023 -