Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001954-TA|BGIBMGA001954-PA|IPR004088|KH, type 1,
IPR004087|KH
(311 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical pr... 75 9e-14
U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical pr... 75 9e-14
AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned exp... 52 5e-07
Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical p... 48 1e-05
Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical pr... 48 1e-05
Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical pr... 48 1e-05
U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical pr... 46 3e-05
AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical ... 45 6e-05
U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical pr... 44 1e-04
AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical ... 42 4e-04
Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical p... 42 7e-04
Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical p... 42 7e-04
Z70686-9|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z70686-8|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical pr... 42 7e-04
Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical pr... 36 0.049
Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical pr... 36 0.049
U00047-6|AAA50692.1| 279|Caenorhabditis elegans Hypothetical pr... 35 0.065
L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical pr... 34 0.11
U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical pr... 33 0.26
U80444-9|AAO12448.1| 71|Caenorhabditis elegans Hypothetical pr... 29 3.2
U80444-8|AAO12446.1| 67|Caenorhabditis elegans Hypothetical pr... 29 3.2
Z92775-4|CAB07163.3| 479|Caenorhabditis elegans Hypothetical pr... 28 7.4
AL132895-5|CAC35863.2| 479|Caenorhabditis elegans Hypothetical ... 28 7.4
>U80444-7|AAO12447.1| 380|Caenorhabditis elegans Hypothetical
protein F26B1.2c protein.
Length = 380
Score = 74.5 bits (175), Expect = 9e-14
Identities = 43/80 (53%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 232 TSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITITGSPGRIQMA 291
T+ QVTIP DL G IIG+ G RI +IR ESGA I + E G +RIITI G+ +I A
Sbjct: 300 TTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITL-EQSNGQPERIITIKGTEQQIHSA 358
Query: 292 QYLLQQSVHESNPNLGRGNF 311
QYLLQQ V N GR F
Sbjct: 359 QYLLQQCVR--NSTQGRERF 376
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 55 KTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQVPIKGPIQAYDP-HNYD 113
K ARLKIF+ AP S++R++ G+ +++ + EV+ ++++PIKG Y P NYD
Sbjct: 136 KCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPYLPAFNYD 195
Query: 114 DFYAEEY 120
+Y
Sbjct: 196 PSNISDY 202
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 243 AGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITIT 282
AGAIIGK G I+++RAE A +++ P + +R+ T+T
Sbjct: 44 AGAIIGKGGENIKRLRAEFNAHVQV--PDSNTPERVCTVT 81
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 243 AGAIIGKAGSRIRKIRAESGAGIEI-AEPLPGSNDRIITITG 283
AGA+IG+ GS+I+++R + A ++I PGS DR++ +G
Sbjct: 119 AGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSG 160
>U80444-5|AAB37791.1| 397|Caenorhabditis elegans Hypothetical
protein F26B1.2a protein.
Length = 397
Score = 74.5 bits (175), Expect = 9e-14
Identities = 43/80 (53%), Positives = 50/80 (62%), Gaps = 3/80 (3%)
Query: 232 TSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITITGSPGRIQMA 291
T+ QVTIP DL G IIG+ G RI +IR ESGA I + E G +RIITI G+ +I A
Sbjct: 317 TTAQVTIPSDLGGTIIGRGGERIARIRQESGAQITL-EQSNGQPERIITIKGTEQQIHSA 375
Query: 292 QYLLQQSVHESNPNLGRGNF 311
QYLLQQ V N GR F
Sbjct: 376 QYLLQQCVR--NSTQGRERF 393
Score = 49.6 bits (113), Expect = 3e-06
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 55 KTGARLKIFSNSAPQSSERIVQLIGKPDSIVSGVREVLDLVRQVPIKGPIQAYDP-HNYD 113
K ARLKIF+ AP S++R++ G+ +++ + EV+ ++++PIKG Y P NYD
Sbjct: 153 KCSARLKIFTGCAPGSTDRVLITSGEQKNVLGIIEEVMKELKEIPIKGSATPYLPAFNYD 212
Query: 114 DFYAEEY 120
+Y
Sbjct: 213 PSNISDY 219
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/40 (42%), Positives = 27/40 (67%), Gaps = 2/40 (5%)
Query: 243 AGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITIT 282
AGAIIGK G I+++RAE A +++ P + +R+ T+T
Sbjct: 61 AGAIIGKGGENIKRLRAEFNAHVQV--PDSNTPERVCTVT 98
Score = 36.7 bits (81), Expect = 0.021
Identities = 17/42 (40%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 243 AGAIIGKAGSRIRKIRAESGAGIEI-AEPLPGSNDRIITITG 283
AGA+IG+ GS+I+++R + A ++I PGS DR++ +G
Sbjct: 136 AGALIGRNGSKIKELREKCSARLKIFTGCAPGSTDRVLITSG 177
>AC006714-9|AAK29714.5| 430|Caenorhabditis elegans Patterned
expression site protein 4 protein.
Length = 430
Score = 52.0 bits (119), Expect = 5e-07
Identities = 25/61 (40%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 235 QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIA-EPLPGSNDRIITITGSPGRIQMAQY 293
+V +P G++IGK GS+I+ IR +GA I++A E LP S +R +T++G+ I +A
Sbjct: 156 RVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAINLATS 215
Query: 294 L 294
L
Sbjct: 216 L 216
Score = 44.8 bits (101), Expect = 8e-05
Identities = 25/48 (52%), Positives = 33/48 (68%), Gaps = 2/48 (4%)
Query: 244 GAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITITGSPGRIQMA 291
G+IIGK G +I+KIR ESGA I I++ +RI+TITG+ G I A
Sbjct: 84 GSIIGKKGDQIKKIREESGAKINISD--GSCPERIVTITGTLGVIGKA 129
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 56 TGARLKIFSNSAPQSSERIVQLIGKPDSI 84
TGA +++ S P S+ER V L G D+I
Sbjct: 182 TGASIQVASEMLPHSTERAVTLSGTADAI 210
>Z73969-19|CAJ43440.1| 548|Caenorhabditis elegans Hypothetical
protein C12D8.1c protein.
Length = 548
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 238 IPKDLAGAIIGKAGSRIRKIRAESGAGIEIA-EPLPGSNDRIITITGSPGRIQMAQYLLQ 296
IP+ G +IG+ GS I+ I+A++G ++++ + P S R++T+ GS ++ A++L+
Sbjct: 13 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN 72
Query: 297 QSVHES-NP 304
+ V S NP
Sbjct: 73 EVVARSQNP 81
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 236 VTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIA-EPLPGSNDRIITITGSPGRIQMAQYL 294
+++P G +IGK G I++I +ESGA E++ +P +++++ I G I+ A++L
Sbjct: 281 MSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDPTGNADEKVFVIKGGKRAIEHAKHL 340
Query: 295 LQQSVHESNPN 305
++ V + PN
Sbjct: 341 IRIKVGDIAPN 351
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 232 TSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSND--RIITITGSPGRIQ 289
T+ + IP + G IIGK+G IR+++ +SG + + + +D + + ITG P +I+
Sbjct: 92 TTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQKIE 151
Query: 290 MAQYLLQQSVHESNPNLG 307
+A+ L+ + ++ G
Sbjct: 152 LAKQLVAEILNSGGDGNG 169
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 235 QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEI-AEPLPGSNDRIITITGSPGRIQMAQY 293
+V +P+ G IIGK G I+++ E+G I+ + P + +R I G+ +I A
Sbjct: 189 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRATE 248
Query: 294 LLQQSVHESNPNLGRG 309
+ + V +S G G
Sbjct: 249 RITELVKKSTMQQGGG 264
>Z73969-2|CAA98233.1| 611|Caenorhabditis elegans Hypothetical
protein C12D8.1b protein.
Length = 611
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 238 IPKDLAGAIIGKAGSRIRKIRAESGAGIEIA-EPLPGSNDRIITITGSPGRIQMAQYLLQ 296
IP+ G +IG+ GS I+ I+A++G ++++ + P S R++T+ GS ++ A++L+
Sbjct: 76 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN 135
Query: 297 QSVHES-NP 304
+ V S NP
Sbjct: 136 EVVARSQNP 144
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 236 VTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIA-EPLPGSNDRIITITGSPGRIQMAQYL 294
+++P G +IGK G I++I +ESGA E++ +P +++++ I G I+ A++L
Sbjct: 344 MSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDPTGNADEKVFVIKGGKRAIEHAKHL 403
Query: 295 LQQSVHESNPN 305
++ V + PN
Sbjct: 404 IRIKVGDIAPN 414
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 232 TSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSND--RIITITGSPGRIQ 289
T+ + IP + G IIGK+G IR+++ +SG + + + +D + + ITG P +I+
Sbjct: 155 TTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQKIE 214
Query: 290 MAQYLLQQSVHESNPNLG 307
+A+ L+ + ++ G
Sbjct: 215 LAKQLVAEILNSGGDGNG 232
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 235 QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEI-AEPLPGSNDRIITITGSPGRIQMAQY 293
+V +P+ G IIGK G I+++ E+G I+ + P + +R I G+ +I A
Sbjct: 252 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRATE 311
Query: 294 LLQQSVHESNPNLGRG 309
+ + V +S G G
Sbjct: 312 RITELVKKSTMQQGGG 327
>Z73969-1|CAA98232.1| 589|Caenorhabditis elegans Hypothetical
protein C12D8.1a protein.
Length = 589
Score = 47.6 bits (108), Expect = 1e-05
Identities = 23/69 (33%), Positives = 44/69 (63%), Gaps = 2/69 (2%)
Query: 238 IPKDLAGAIIGKAGSRIRKIRAESGAGIEIA-EPLPGSNDRIITITGSPGRIQMAQYLLQ 296
IP+ G +IG+ GS I+ I+A++G ++++ + P S R++T+ GS ++ A++L+
Sbjct: 54 IPESAVGIVIGRGGSEIQGIQAKAGCRVQMSPDADPSSGVRMVTLEGSRSNVETAKHLIN 113
Query: 297 QSVHES-NP 304
+ V S NP
Sbjct: 114 EVVARSQNP 122
Score = 47.6 bits (108), Expect = 1e-05
Identities = 22/71 (30%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 236 VTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIA-EPLPGSNDRIITITGSPGRIQMAQYL 294
+++P G +IGK G I++I +ESGA E++ +P +++++ I G I+ A++L
Sbjct: 322 MSVPAAKCGLVIGKGGETIKQINSESGAHCELSRDPTGNADEKVFVIKGGKRAIEHAKHL 381
Query: 295 LQQSVHESNPN 305
++ V + PN
Sbjct: 382 IRIKVGDIAPN 392
Score = 44.0 bits (99), Expect = 1e-04
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 2/78 (2%)
Query: 232 TSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSND--RIITITGSPGRIQ 289
T+ + IP + G IIGK+G IR+++ +SG + + + +D + + ITG P +I+
Sbjct: 133 TTIDIAIPPNRCGLIIGKSGDTIRQLQEKSGCKMILVQDNQSVSDQSKPLRITGDPQKIE 192
Query: 290 MAQYLLQQSVHESNPNLG 307
+A+ L+ + ++ G
Sbjct: 193 LAKQLVAEILNSGGDGNG 210
Score = 39.5 bits (88), Expect = 0.003
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 235 QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEI-AEPLPGSNDRIITITGSPGRIQMAQY 293
+V +P+ G IIGK G I+++ E+G I+ + P + +R I G+ +I A
Sbjct: 230 EVVVPRSSVGIIIGKQGDTIKRLAMETGTKIQFKPDDDPSTPERCAVIMGTRDQIYRATE 289
Query: 294 LLQQSVHESNPNLGRG 309
+ + V +S G G
Sbjct: 290 RITELVKKSTMQQGGG 305
>U00047-8|AAP68924.1| 510|Caenorhabditis elegans Hypothetical
protein ZK418.9b protein.
Length = 510
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 235 QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEI-AEPLPGSNDRIITITGSPGRIQMAQY 293
+V +P+ AG IIGK G I+++ AE+G I+ + P S DRI I G+ +I A
Sbjct: 196 EVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATE 255
Query: 294 LLQQSVHESNPNLG 307
+ + V+ + N G
Sbjct: 256 RITEIVNRAIKNNG 269
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 238 IPKDLAGAIIGKAGSRIRKIRAESGA--GIEIAEPLPGSNDRIITITGSPGRIQMAQYLL 295
+P G +IGK G I++I E+GA G+ A ++++ I GS +I A +L+
Sbjct: 291 VPAGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEKVFEIKGSQLQIHHASHLV 350
Query: 296 QQSVHESNPN 305
+ V E +PN
Sbjct: 351 RIKVGEISPN 360
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 238 IPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSND-RIITITGSPGRIQMAQYLLQ 296
+P+ + G +IGK GS IR I+ SG +++ N R TI G P ++ +A+ ++
Sbjct: 13 VPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPPDQVAVARQMIT 72
Query: 297 QSVHES 302
Q ++ +
Sbjct: 73 QVINRN 78
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 231 DTSTQVTIPKDLAGAIIGKAGSRIRKIRAESG---AGIEIAEPLPGSNDRIITITGSPGR 287
+ + ++ IP D G +IGK G IR ++ +SG + + + + GSP
Sbjct: 90 EVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQPKPLRMIGSPAA 149
Query: 288 IQMAQYLLQQSVHESNPN 305
I+ A+ L+ ++ + N
Sbjct: 150 IETAKALVHNIMNNTQGN 167
>U00047-7|AAA50693.2| 557|Caenorhabditis elegans Hypothetical
protein ZK418.9a protein.
Length = 557
Score = 46.4 bits (105), Expect = 3e-05
Identities = 26/74 (35%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 235 QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEI-AEPLPGSNDRIITITGSPGRIQMAQY 293
+V +P+ AG IIGK G I+++ AE+G I+ + P S DRI I G+ +I A
Sbjct: 243 EVIVPRLSAGMIIGKGGEMIKRLAAETGTKIQFKPDTNPNSEDRIAVIMGTRDQIYRATE 302
Query: 294 LLQQSVHESNPNLG 307
+ + V+ + N G
Sbjct: 303 RITEIVNRAIKNNG 316
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 238 IPKDLAGAIIGKAGSRIRKIRAESGA--GIEIAEPLPGSNDRIITITGSPGRIQMAQYLL 295
+P G +IGK G I++I E+GA G+ A ++++ I GS +I A +L+
Sbjct: 338 VPAGKCGLVIGKGGENIKQIERETGATCGLAPAAEQKNEDEKVFEIKGSQLQIHHASHLV 397
Query: 296 QQSVHESNPN 305
+ V E +PN
Sbjct: 398 RIKVGEISPN 407
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 238 IPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSND-RIITITGSPGRIQMAQYLLQ 296
+P+ + G +IGK GS IR I+ SG +++ N R TI G P ++ +A+ ++
Sbjct: 60 VPEKVVGLVIGKGGSEIRLIQQTSGCRVQMDPDHQSVNGFRNCTIEGPPDQVAVARQMIT 119
Query: 297 QSVHES 302
Q ++ +
Sbjct: 120 QVINRN 125
Score = 34.3 bits (75), Expect = 0.11
Identities = 19/78 (24%), Positives = 37/78 (47%), Gaps = 3/78 (3%)
Query: 231 DTSTQVTIPKDLAGAIIGKAGSRIRKIRAESG---AGIEIAEPLPGSNDRIITITGSPGR 287
+ + ++ IP D G +IGK G IR ++ +SG + + + + GSP
Sbjct: 137 EVTEEMLIPADKIGLVIGKGGETIRIVQEQSGLRNCNVVQETTTATGQPKPLRMIGSPAA 196
Query: 288 IQMAQYLLQQSVHESNPN 305
I+ A+ L+ ++ + N
Sbjct: 197 IETAKALVHNIMNNTQGN 214
>AC024089-1|AAK09071.1| 641|Caenorhabditis elegans Hypothetical
protein C36E6.1b protein.
Length = 641
Score = 45.2 bits (102), Expect = 6e-05
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 236 VTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIA-EPLPGSNDRIITITGSPGRIQMAQYL 294
+ IP G +IG+ G I++I ESGA E++ +P ++ I GS +++ A++L
Sbjct: 330 MVIPASKCGLVIGRGGETIKQINQESGAHCELSRDPNTNPIEKTFVIRGSEAQVEHAKHL 389
Query: 295 LQQSVHESNPN 305
++ V + PN
Sbjct: 390 IRVKVGDIPPN 400
Score = 38.3 bits (85), Expect = 0.007
Identities = 17/62 (27%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 235 QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLP-GSNDRIITITGSPGRIQMAQY 293
++ IP + GAIIGK G ++RK+R+ + +++ + + + ITG P +++ +
Sbjct: 160 EIPIPANKCGAIIGKGGEQMRKLRSWTNCNVQLLQDNNIADTVKPLKITGDPKQVEQCRL 219
Query: 294 LL 295
L+
Sbjct: 220 LV 221
Score = 38.3 bits (85), Expect = 0.007
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 233 STQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIE-IAEPLPGSNDRIITITGSPGRIQMA 291
S QV +P+ GAI+G G I+K+ E+G I+ + + P +R + I G+ ++ +
Sbjct: 247 SLQVKVPRCTVGAIMGLQGKNIKKLSDETGTKIQFLPDDDPKLMERSLAIIGNKNKVYVC 306
Query: 292 QYLLQQSVHESN 303
L+ +++ E+N
Sbjct: 307 AQLI-KAIVEAN 317
Score = 37.9 bits (84), Expect = 0.009
Identities = 16/64 (25%), Positives = 34/64 (53%)
Query: 236 VTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITITGSPGRIQMAQYLL 295
V +P+ G +IG+ G+ ++ I +SG +++ + R++ I G P I+ A+ +
Sbjct: 59 VPVPEQCVGLVIGRNGAEVQAISQKSGCRVQVTVQPSSTGFRLVEIYGIPENIERAKAYI 118
Query: 296 QQSV 299
+ V
Sbjct: 119 SEVV 122
>U88174-6|AAB42272.1| 680|Caenorhabditis elegans Hypothetical
protein M01A10.1 protein.
Length = 680
Score = 44.0 bits (99), Expect = 1e-04
Identities = 23/69 (33%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 238 IPKDLAGAIIGKAGSRIRKIRAESGAGIEIA-EPLPGSNDRIITITGSPGRIQMAQYLLQ 296
IP G +IG+ G IR+I ESGA E++ +P + ++ I GS +++ A++L++
Sbjct: 417 IPASKCGLVIGRGGETIRQINKESGAYCEMSRDPSISAIEKQFVIRGSETQVEHAKHLIR 476
Query: 297 QSVHESNPN 305
V + PN
Sbjct: 477 VKVGDIPPN 485
Score = 43.2 bits (97), Expect = 2e-04
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 1/74 (1%)
Query: 233 STQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIE-IAEPLPGSNDRIITITGSPGRIQMA 291
S QV +P+ GAI+G GS I+KI E+ I+ + + P +R + + G+ ++ +
Sbjct: 332 SLQVKVPRSTVGAIMGLQGSNIKKISNETETKIQFMPDDDPKLMERTLVVIGNKNKVYVC 391
Query: 292 QYLLQQSVHESNPN 305
LLQ+ V ++ N
Sbjct: 392 ARLLQKIVEANSEN 405
Score = 37.1 bits (82), Expect = 0.016
Identities = 23/74 (31%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 231 DTST-----QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITITGSP 285
DTST V+IP++ G +IG+ G I+ I +SG ++I + R + I G
Sbjct: 140 DTSTTVIKASVSIPEESVGLVIGRNGVEIQAISQKSGCRVQIVAEPSTTGYRSVDIYGIS 199
Query: 286 GRIQMAQYLLQQSV 299
I++A+ L+ + V
Sbjct: 200 ENIEVAKKLINEVV 213
Score = 36.7 bits (81), Expect = 0.021
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 236 VTIPKDLAGAIIGKAGSRIRKIRAESGAG-IEIAEPLPGSNDRIITITGSPGRIQMAQYL 294
+ IP + GAIIGK G ++RK+R+ + I I E + + + ITG P ++ A+ L
Sbjct: 247 IPIPANKCGAIIGKKGEQMRKLRSWTNCDFILIQENNIADSVKPLQITGQPKEVEHAKAL 306
Query: 295 L 295
+
Sbjct: 307 V 307
>AL132898-7|CAC14410.1| 413|Caenorhabditis elegans Hypothetical
protein Y59A8B.10 protein.
Length = 413
Score = 42.3 bits (95), Expect = 4e-04
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 233 STQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEI---AEPLPGSNDRIITITGSPGRIQ 289
S ++ IP + GAIIGK G +R ++ ++ +++ +E PG+++RI + G I
Sbjct: 43 SIKILIPSNAVGAIIGKGGEAMRNLKNDNNCRVQMSKNSETYPGTSERICLVKGRLNNIM 102
Query: 290 MAQYLLQQSVHESNPNLG 307
+Q + E + G
Sbjct: 103 AVIESIQDKIREKCADQG 120
Score = 32.7 bits (71), Expect = 0.34
Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 235 QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGS 274
++ +P AG +IGK+G+ I+ IR + G I++ P GS
Sbjct: 137 KIVMPNTSAGMVIGKSGANIKDIREQFGCQIQV-YPKAGS 175
>Z70686-12|CAB54289.1| 2584|Caenorhabditis elegans Hypothetical
protein R11A8.7b protein.
Length = 2584
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 229 QQDTSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSN---DRIITITGSP 285
+ ++S ++TIP A +IGK GS + +R +GA IEI + SN +R + G+P
Sbjct: 1791 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI-NKIQESNKQAERTVLAKGTP 1849
Query: 286 GRIQMAQYLLQQSVHESN 303
++ A ++ +++++
Sbjct: 1850 EMVRYAMNIINYMIYDAD 1867
>Z70686-11|CAA94615.1| 2606|Caenorhabditis elegans Hypothetical
protein R11A8.7a protein.
Length = 2606
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 229 QQDTSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSN---DRIITITGSP 285
+ ++S ++TIP A +IGK GS + +R +GA IEI + SN +R + G+P
Sbjct: 1791 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI-NKIQESNKQAERTVLAKGTP 1849
Query: 286 GRIQMAQYLLQQSVHESN 303
++ A ++ +++++
Sbjct: 1850 EMVRYAMNIINYMIYDAD 1867
>Z70686-9|CAM35837.1| 1427|Caenorhabditis elegans Hypothetical
protein R11A8.7d protein.
Length = 1427
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 229 QQDTSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSN---DRIITITGSP 285
+ ++S ++TIP A +IGK GS + +R +GA IEI + SN +R + G+P
Sbjct: 612 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI-NKIQESNKQAERTVLAKGTP 670
Query: 286 GRIQMAQYLLQQSVHESN 303
++ A ++ +++++
Sbjct: 671 EMVRYAMNIINYMIYDAD 688
>Z70686-8|CAM35836.1| 1405|Caenorhabditis elegans Hypothetical
protein R11A8.7c protein.
Length = 1405
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 229 QQDTSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSN---DRIITITGSP 285
+ ++S ++TIP A +IGK GS + +R +GA IEI + SN +R + G+P
Sbjct: 612 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI-NKIQESNKQAERTVLAKGTP 670
Query: 286 GRIQMAQYLLQQSVHESN 303
++ A ++ +++++
Sbjct: 671 EMVRYAMNIINYMIYDAD 688
>Z70310-9|CAB54294.1| 2584|Caenorhabditis elegans Hypothetical protein
R11A8.7b protein.
Length = 2584
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 229 QQDTSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSN---DRIITITGSP 285
+ ++S ++TIP A +IGK GS + +R +GA IEI + SN +R + G+P
Sbjct: 1791 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI-NKIQESNKQAERTVLAKGTP 1849
Query: 286 GRIQMAQYLLQQSVHESN 303
++ A ++ +++++
Sbjct: 1850 EMVRYAMNIINYMIYDAD 1867
>Z70310-8|CAA94370.1| 2606|Caenorhabditis elegans Hypothetical protein
R11A8.7a protein.
Length = 2606
Score = 41.5 bits (93), Expect = 7e-04
Identities = 22/78 (28%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 229 QQDTSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSN---DRIITITGSP 285
+ ++S ++TIP A +IGK GS + +R +GA IEI + SN +R + G+P
Sbjct: 1791 RNESSWKLTIPAYAASRVIGKGGSNVNAVREATGAIIEI-NKIQESNKQAERTVLAKGTP 1849
Query: 286 GRIQMAQYLLQQSVHESN 303
++ A ++ +++++
Sbjct: 1850 EMVRYAMNIINYMIYDAD 1867
>Z54342-2|CAA91144.2| 1220|Caenorhabditis elegans Hypothetical
protein C08H9.2 protein.
Length = 1220
Score = 41.5 bits (93), Expect = 7e-04
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 229 QQDTSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITITGSPGRI 288
Q S ++ IPKD G +IGK G+ +R + AE+ I+I P ITITG I
Sbjct: 133 QTQASREIDIPKDHHGRLIGKEGALLRNLEAETNCRIQI--PNRDGPSSKITITGPREGI 190
Query: 289 Q-MAQYLLQQSVHES 302
Q A ++L S E+
Sbjct: 191 QRAAAHILAVSEREA 205
Score = 40.7 bits (91), Expect = 0.001
Identities = 22/56 (39%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 236 VTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITITGSPGRIQMA 291
V I K+ I+GK G+ IRK+R E+ I++ P GS+D IT+TG ++ A
Sbjct: 569 VAIFKEFLKHIVGKGGASIRKLRDETETRIDL--PESGSDDGKITVTGKQANVEKA 622
Score = 32.3 bits (70), Expect = 0.45
Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 233 STQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITITGSPGRIQMAQ 292
S + +P D+ +IIG+ G +RK+ + I I P S++ IT+TG + A
Sbjct: 929 SKVIQLPVDMHRSIIGRGGETVRKLMQDYDVNISI--PKDNSSED-ITVTGQTENVDQAL 985
Query: 293 YLLQQSVHE 301
L+ + E
Sbjct: 986 EALRGKLGE 994
Score = 28.7 bits (61), Expect = 5.6
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 229 QQDTSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITITG 283
+ + S + IP+ L IIG GS ++ IR +S + + P S ++ I G
Sbjct: 488 ENEKSRDIIIPQRLHKLIIGSKGSGVQVIR-DSHPNVSVVFPDAKSKSDVVNIRG 541
>Z34802-8|CAH10787.1| 704|Caenorhabditis elegans Hypothetical
protein M88.5b protein.
Length = 704
Score = 35.5 bits (78), Expect = 0.049
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 234 TQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAE 269
T+V++P + G IIGK G +R+++ +GA ++I E
Sbjct: 560 TEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPE 595
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 231 DTSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAE 269
DT ++ L G +IGKAGS I++I ++G I + +
Sbjct: 274 DTVLRMRAHNQLCGRLIGKAGSSIKEIMQKTGTNITVTK 312
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 238 IPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEP 270
+P + GA+IG G I+ I ++GA ++I P
Sbjct: 423 VPDSMIGALIGAKGKNIKMIIRDTGASVKIEAP 455
>Z34802-7|CAA84338.2| 828|Caenorhabditis elegans Hypothetical
protein M88.5a protein.
Length = 828
Score = 35.5 bits (78), Expect = 0.049
Identities = 14/36 (38%), Positives = 25/36 (69%)
Query: 234 TQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAE 269
T+V++P + G IIGK G +R+++ +GA ++I E
Sbjct: 684 TEVSVPTRIIGRIIGKGGQNVRELQRITGAVVKIPE 719
Score = 31.9 bits (69), Expect = 0.60
Identities = 14/39 (35%), Positives = 23/39 (58%)
Query: 231 DTSTQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAE 269
DT ++ L G +IGKAGS I++I ++G I + +
Sbjct: 398 DTVLRMRAHNQLCGRLIGKAGSSIKEIMQKTGTNITVTK 436
Score = 31.1 bits (67), Expect = 1.1
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 238 IPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEP 270
+P + GA+IG G I+ I ++GA ++I P
Sbjct: 547 VPDSMIGALIGAKGKNIKMIIRDTGASVKIEAP 579
>U00047-6|AAA50692.1| 279|Caenorhabditis elegans Hypothetical
protein ZK418.8 protein.
Length = 279
Score = 35.1 bits (77), Expect = 0.065
Identities = 16/78 (20%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 233 STQVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDR-IITITGSP-GRIQM 290
+ + + + G ++G+ G I+ +R + I+I++P+P R ++T+ G ++
Sbjct: 165 TAEFEVETQMVGYLVGRGGRHIKTLRDKFSVNIQISDPIPDDPTRSLVTVRGRDLTALKE 224
Query: 291 AQYLLQQSVHESNPNLGR 308
+ +++++V N N R
Sbjct: 225 VEVVMKETVLPRNYNCAR 242
>L25598-6|AAA27939.2| 886|Caenorhabditis elegans Hypothetical
protein C06G4.1 protein.
Length = 886
Score = 34.3 bits (75), Expect = 0.11
Identities = 18/72 (25%), Positives = 35/72 (48%)
Query: 235 QVTIPKDLAGAIIGKAGSRIRKIRAESGAGIEIAEPLPGSNDRIITITGSPGRIQMAQYL 294
QV +P+++ +IG+ G I +IR+ES A + +D+ + +G A YL
Sbjct: 779 QVRVPENMVARLIGRHGVEINRIRSESKAKCYLNAIRGNLDDKFMVCSGGVEEAAYAAYL 838
Query: 295 LQQSVHESNPNL 306
+ + +P +
Sbjct: 839 TKVKIGIIDPKV 850
>U80444-6|AAO12449.1| 93|Caenorhabditis elegans Hypothetical
protein F26B1.2e protein.
Length = 93
Score = 33.1 bits (72), Expect = 0.26
Identities = 13/27 (48%), Positives = 20/27 (74%)
Query: 243 AGAIIGKAGSRIRKIRAESGAGIEIAE 269
AGAIIGK G I+++RAE A +++ +
Sbjct: 61 AGAIIGKGGENIKRLRAEFNAHVQVPD 87
>U80444-9|AAO12448.1| 71|Caenorhabditis elegans Hypothetical
protein F26B1.2d protein.
Length = 71
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 243 AGAIIGKAGSRIRKIRAE 260
AGAIIGK G I+++RAE
Sbjct: 44 AGAIIGKGGENIKRLRAE 61
>U80444-8|AAO12446.1| 67|Caenorhabditis elegans Hypothetical
protein F26B1.2b protein.
Length = 67
Score = 29.5 bits (63), Expect = 3.2
Identities = 12/18 (66%), Positives = 15/18 (83%)
Query: 243 AGAIIGKAGSRIRKIRAE 260
AGAIIGK G I+++RAE
Sbjct: 44 AGAIIGKGGENIKRLRAE 61
>Z92775-4|CAB07163.3| 479|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 479
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 276 DRIITITGSPGRIQMAQYLLQQSVH 300
D+++T G GR QM Y++ SVH
Sbjct: 28 DKVLTAFGKYGRYQMLAYVITTSVH 52
>AL132895-5|CAC35863.2| 479|Caenorhabditis elegans Hypothetical
protein C06H5.6 protein.
Length = 479
Score = 28.3 bits (60), Expect = 7.4
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 276 DRIITITGSPGRIQMAQYLLQQSVH 300
D+++T G GR QM Y++ SVH
Sbjct: 28 DKVLTAFGKYGRYQMLAYVITTSVH 52
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.315 0.135 0.393
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,180,804
Number of Sequences: 27539
Number of extensions: 187399
Number of successful extensions: 421
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 336
Number of HSP's gapped (non-prelim): 79
length of query: 311
length of database: 12,573,161
effective HSP length: 81
effective length of query: 230
effective length of database: 10,342,502
effective search space: 2378775460
effective search space used: 2378775460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (22.0 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -