Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001952-TA|BGIBMGA001952-PA|undefined
(111 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein. 36 4e-04
AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein. 33 0.002
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 27 0.21
AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein. 26 0.36
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 25 0.63
L10440-1|AAA29360.1| 154|Anopheles gambiae transposase protein. 24 1.1
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein. 24 1.1
AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase ... 24 1.5
DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein. 23 2.6
DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein. 22 4.5
AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein. 22 5.9
>AJ535203-1|CAD59403.1| 1229|Anopheles gambiae SMC1 protein protein.
Length = 1229
Score = 35.5 bits (78), Expect = 4e-04
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 6 EKLDLVKLKFKSVNKRKI-MKEKEVLKLRNKERALLEELGSLKSEVEYLRERLEDM--KE 62
EK++L+K + K+ +K + E+E+ K R + +AL +EL ++ + + R+E M K
Sbjct: 878 EKIELMKQE-KAAHKTLVDQMEEEMAKARREVQALAKELAAIHQSIANIESRIESMKSKR 936
Query: 63 QISQTQNQISMIEI 76
Q Q ++ IEI
Sbjct: 937 QTILMQAKMESIEI 950
Score = 26.6 bits (56), Expect = 0.21
Identities = 20/99 (20%), Positives = 50/99 (50%), Gaps = 5/99 (5%)
Query: 6 EKLDLVKLKFKSVNKRKIMKEKEVLKLRNKERALLEELGSLKSEVEYLRERLEDMKEQIS 65
++L++++ + + ++ K+KEV K+ + +E+ +++E+ KE+++
Sbjct: 257 QELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKEQEIREVEAEMSKRHPMFIKAKEKVA 316
Query: 66 QTQNQ----ISMIEICRISEEAKSRAHLSNLNSHLSDFE 100
TQ + + +E R ++EA +A + L L + E
Sbjct: 317 HTQKKLDGALKTLEQARRADEA-HQADIKKLVDELQEVE 354
Score = 23.8 bits (49), Expect = 1.5
Identities = 11/50 (22%), Positives = 27/50 (54%)
Query: 26 EKEVLKLRNKERALLEELGSLKSEVEYLRERLEDMKEQISQTQNQISMIE 75
EKE +L+ + + +EL ++ E E L++ K+++ + +++ E
Sbjct: 242 EKEAKRLKEDQISKQQELNIIEKRKEEADEVLKEKKKEVGKMTREMAKKE 291
>AJ535207-1|CAD59407.1| 1036|Anopheles gambiae SMC5 protein protein.
Length = 1036
Score = 33.1 bits (72), Expect = 0.002
Identities = 21/76 (27%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 27 KEVLKLRNKERALLEELGSLKSEVEYLRERLEDMKEQISQTQNQISMIEICRISEEAKS- 85
+E K+RN+ + + L+ LRE+ D++EQ+S+ Q + +++ R ++ K
Sbjct: 626 RECDKIRNQRGQIENSIKELQERCAELREQKRDLQEQLSKYQQ--TKMKVKRQEQKCKEL 683
Query: 86 RAHLSNLNSHLSDFER 101
A L N++ FER
Sbjct: 684 TARLVNVDEEKVKFER 699
Score = 21.4 bits (43), Expect = 7.8
Identities = 14/56 (25%), Positives = 28/56 (50%)
Query: 4 CGEKLDLVKLKFKSVNKRKIMKEKEVLKLRNKERALLEELGSLKSEVEYLRERLED 59
C E+ + +FK + + ++KE+ + K+ A+ + + +E ERLED
Sbjct: 253 CTEEKEQQYNQFKQEMEAILARKKELETSKAKQVAIGQRSTDEINSLEEKTERLED 308
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 26.6 bits (56), Expect = 0.21
Identities = 21/60 (35%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 16 KSVNKRKIMKEKEVLKLRNKERALLEELGSLKSEVEYLRERLEDMKEQISQTQNQISMIE 75
KS +K M E EV ++ R +E L+ E LRE LE+MK I + S I+
Sbjct: 932 KSKDKINSM-EDEVEAAQSAIRKGNDERTQLEEEANKLREELEEMKLAIEKAHEGSSSIK 990
Score = 21.4 bits (43), Expect = 7.8
Identities = 13/44 (29%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 26 EKEVLKLRNKERALLEELGSLKSEVEYLRERL-EDMKEQISQTQ 68
EK++ + R + + L E L ++E+E +++L E+ E+ TQ
Sbjct: 519 EKDLEEKRARLQTLEEALPVTRTELETAKQKLQENANEERELTQ 562
>AF042732-2|AAC18057.1| 179|Anopheles gambiae TU37B2 protein.
Length = 179
Score = 25.8 bits (54), Expect = 0.36
Identities = 19/67 (28%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 41 EELGSLKSEVEYLRERLEDMKEQISQTQNQISMIEICRISEEAKSRAHLSNLNSHLSDFE 100
E+ LK EVE ++LE KE + ++ ++ +I R E+ K+ +N + L +
Sbjct: 31 EKYQKLKGEVEKQSKKLEKRKETLGESLDKNHKKKIERDEEKLKN----NNRDLSLVKMK 86
Query: 101 RLFEKGF 107
+F GF
Sbjct: 87 SMFAIGF 93
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 25.0 bits (52), Expect = 0.63
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 20 KRKIMKEKEVLKLRNKERALLEELGSLKSEVEYLRERLEDMKEQISQTQNQISMIE 75
KR K +E K K ++ +LK E+E L++ + KEQ + + QI+ ++
Sbjct: 797 KRSKKKSEESRKNWKKHE---QDFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQ 849
Score = 23.0 bits (47), Expect = 2.6
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 7 KLDLVKLKFKSVNKRKIMKEKEVLKLRNKERALLEELGSLKSEVEYLRERLEDMKEQI-- 64
K++ +F + ++ M E+ L K+R K E+E L +++E +++ I
Sbjct: 702 KIEKTAHRFGQLKEQHDMLNYELNNL--KQRLAQTSFQQTKEEIEELNKKIETLQKTIVE 759
Query: 65 -SQTQNQIS 72
+TQ Q S
Sbjct: 760 ARETQTQCS 768
>L10440-1|AAA29360.1| 154|Anopheles gambiae transposase protein.
Length = 154
Score = 24.2 bits (50), Expect = 1.1
Identities = 12/21 (57%), Positives = 15/21 (71%)
Query: 10 LVKLKFKSVNKRKIMKEKEVL 30
L +LK KS KR MK+K+VL
Sbjct: 104 LERLKVKSAAKRPHMKKKKVL 124
>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
Length = 1201
Score = 24.2 bits (50), Expect = 1.1
Identities = 11/44 (25%), Positives = 24/44 (54%)
Query: 25 KEKEVLKLRNKERALLEELGSLKSEVEYLRERLEDMKEQISQTQ 68
+++E + L + LE++ +E + LE+ KE++S+ Q
Sbjct: 171 RKEESMNLLRESEGKLEKISEYLRTIEDRLKTLEEEKEELSEYQ 214
>AJ439060-8|CAD27759.1| 808|Anopheles gambiae putative V-ATPase
protein.
Length = 808
Score = 23.8 bits (49), Expect = 1.5
Identities = 9/18 (50%), Positives = 14/18 (77%)
Query: 53 LRERLEDMKEQISQTQNQ 70
+R R+ED+K + QTQ+Q
Sbjct: 256 VRTRIEDLKMVLGQTQDQ 273
>DQ182016-1|ABA56308.1| 353|Anopheles gambiae G(alpha)i protein.
Length = 353
Score = 23.0 bits (47), Expect = 2.6
Identities = 8/21 (38%), Positives = 15/21 (71%)
Query: 6 EKLDLVKLKFKSVNKRKIMKE 26
E +++KF+++N+RK KE
Sbjct: 297 EASSYIRMKFENLNRRKDQKE 317
>DQ182017-1|ABA56309.1| 383|Anopheles gambiae G(alpha)s protein.
Length = 383
Score = 22.2 bits (45), Expect = 4.5
Identities = 16/51 (31%), Positives = 28/51 (54%), Gaps = 5/51 (9%)
Query: 6 EKLDLVKLKFKSVNKRKIMKEKEVLKLRNKERALLEELGSLKSEV-EYLRE 55
E LDL FKS+ + ++ V+ NK+ L E++ + KS++ +Y E
Sbjct: 257 ESLDL----FKSIWNNRWLRTISVILFLNKQDLLAEKIKAGKSKLSDYFGE 303
>AJ535208-1|CAD59408.1| 1133|Anopheles gambiae SMC6 protein protein.
Length = 1133
Score = 21.8 bits (44), Expect = 5.9
Identities = 11/45 (24%), Positives = 22/45 (48%)
Query: 18 VNKRKIMKEKEVLKLRNKERALLEELGSLKSEVEYLRERLEDMKE 62
V +RK E E +L+ + L + S + EV+ + + +K+
Sbjct: 437 VEQRKQAVETEKAQLKERNDELASMIASAQREVDLMYNTMAHVKD 481
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.317 0.132 0.350
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,487
Number of Sequences: 2123
Number of extensions: 3058
Number of successful extensions: 22
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 17
length of query: 111
length of database: 516,269
effective HSP length: 56
effective length of query: 55
effective length of database: 397,381
effective search space: 21855955
effective search space used: 21855955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 43 (21.4 bits)
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