Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001951-TA|BGIBMGA001951-PA|IPR001810|Cyclin-like F-box,
IPR000608|Ubiquitin-conjugating enzyme, E2
(430 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 129 4e-30
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 129 4e-30
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 87 2e-17
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 85 9e-17
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 85 9e-17
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 71 2e-12
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 69 8e-12
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 64 2e-10
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 59 5e-09
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 56 4e-08
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 54 1e-07
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 52 6e-07
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 50 4e-06
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 49 7e-06
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 49 7e-06
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 46 7e-05
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 39 0.008
L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical pr... 37 0.032
L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical pr... 37 0.032
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 36 0.042
U64849-1|AAC48052.3| 936|Caenorhabditis elegans Hypothetical pr... 36 0.042
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 36 0.042
Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical pr... 34 0.17
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 34 0.22
AF038613-10|AAB92047.1| 148|Caenorhabditis elegans Hypothetical... 33 0.39
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 33 0.52
Z81531-2|CAB04316.1| 422|Caenorhabditis elegans Hypothetical pr... 31 2.1
AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical ... 30 3.6
AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical ... 30 3.6
AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical ... 30 3.6
AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical ... 29 4.8
U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical pr... 29 8.4
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 129 bits (311), Expect = 4e-30
Identities = 63/143 (44%), Positives = 85/143 (59%)
Query: 282 RLRIELKMLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXXXX 341
R++ EL+ L DPP +A P+ HWQA++ GP SPY+GGVF+L I
Sbjct: 5 RIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKP 64
Query: 342 XXXRFLTRILHPNVSRHGDVGIDSVHHNWSLALTLSKVLISIQSLLTDPYTAVCMEPELG 401
F TRI HPN++ +G + +D + WS ALT+SKVL+SI SLL DP + PE+
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIA 124
Query: 402 EMYVRDRARFESLARRWTWRYAM 424
+Y DR R+ LAR WT +YAM
Sbjct: 125 RIYKTDRERYNQLAREWTQKYAM 147
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 129 bits (311), Expect = 4e-30
Identities = 63/143 (44%), Positives = 85/143 (59%)
Query: 282 RLRIELKMLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXXXX 341
R++ EL+ L DPP +A P+ HWQA++ GP SPY+GGVF+L I
Sbjct: 5 RIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKP 64
Query: 342 XXXRFLTRILHPNVSRHGDVGIDSVHHNWSLALTLSKVLISIQSLLTDPYTAVCMEPELG 401
F TRI HPN++ +G + +D + WS ALT+SKVL+SI SLL DP + PE+
Sbjct: 65 PKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPLVPEIA 124
Query: 402 EMYVRDRARFESLARRWTWRYAM 424
+Y DR R+ LAR WT +YAM
Sbjct: 125 RIYKTDRERYNQLAREWTQKYAM 147
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 87.4 bits (207), Expect = 2e-17
Identities = 46/142 (32%), Positives = 73/142 (51%)
Query: 282 RLRIELKMLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXXXX 341
R+ E + L DP GI+A P + ++ + GP SP+ GGVF L +
Sbjct: 8 RIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMAA 67
Query: 342 XXXRFLTRILHPNVSRHGDVGIDSVHHNWSLALTLSKVLISIQSLLTDPYTAVCMEPELG 401
RF+T+I HPN+ + G + +D + WS AL + VL+SIQ+LL+ P + ++
Sbjct: 68 PKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDVA 127
Query: 402 EMYVRDRARFESLARRWTWRYA 423
E + + A A++WT YA
Sbjct: 128 EQWKTNEAEAIKTAKQWTMNYA 149
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 85.0 bits (201), Expect = 9e-17
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 280 RNRLRIELKMLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXX 339
R RL + K L+ DPP G++ P + W+A + GP +P+E G F L ++
Sbjct: 6 RRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPN 65
Query: 340 XXXXXRFLTRILHPNVSRHGDVGIDSVHHNWSLALTLSKVLISIQSLLTDPYTAVCMEPE 399
+F++++ HPNV G + +D + + WS ++ +L SIQSLL +P
Sbjct: 66 KPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSL 125
Query: 400 LGEMYVRDRARFE 412
++Y +R +E
Sbjct: 126 AAQLYQENRREYE 138
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 85.0 bits (201), Expect = 9e-17
Identities = 39/133 (29%), Positives = 67/133 (50%)
Query: 280 RNRLRIELKMLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXX 339
R RL + K L+ DPP G++ P + W+A + GP +P+E G F L ++
Sbjct: 6 RRRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPN 65
Query: 340 XXXXXRFLTRILHPNVSRHGDVGIDSVHHNWSLALTLSKVLISIQSLLTDPYTAVCMEPE 399
+F++++ HPNV G + +D + + WS ++ +L SIQSLL +P
Sbjct: 66 KPPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSL 125
Query: 400 LGEMYVRDRARFE 412
++Y +R +E
Sbjct: 126 AAQLYQENRREYE 138
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 70.5 bits (165), Expect = 2e-12
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 4/147 (2%)
Query: 281 NRLRIELK--MLRNDPPE-GIAATPLDPKCCHWQASVTGPVGSPYEGGVFYLYIQXXXXX 337
NRL+ E K + ++ E GI L+ + + GP +PY GG+F L I+
Sbjct: 7 NRLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQY 66
Query: 338 XXXXXXXRFLTRILHPNVSRH-GDVGIDSVHHNWSLALTLSKVLISIQSLLTDPYTAVCM 396
+F T+I HPNVS G + +D + W+ +LTL VL+SIQ+L+ P
Sbjct: 67 PFSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTPEPKDPQ 126
Query: 397 EPELGEMYVRDRARFESLARRWTWRYA 423
+ + + Y+ A F++ A WT ++A
Sbjct: 127 DAVVAKQYMEKPAVFKATAEYWTTKFA 153
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 68.5 bits (160), Expect = 8e-12
Identities = 46/148 (31%), Positives = 64/148 (43%), Gaps = 14/148 (9%)
Query: 282 RLRIELKMLRNDPPEGIAATPLDP-KCCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXXX 340
RL E K L PPEGI A P+D W+ +TGP + + GVF I
Sbjct: 8 RLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPLS 67
Query: 341 XXXXRFLTRILHPNVSRHGDVGIDSVH-------------HNWSLALTLSKVLISIQSLL 387
RF I HPN+ G V I +H WS ++ K+L+S+ S+L
Sbjct: 68 PPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSML 127
Query: 388 TDPYTAVCMEPELGEMYVRDRARFESLA 415
+P +M+ DRA+FE +A
Sbjct: 128 AEPNDESPANVSAAKMWREDRAQFEKIA 155
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 63.7 bits (148), Expect = 2e-10
Identities = 38/115 (33%), Positives = 61/115 (53%), Gaps = 2/115 (1%)
Query: 311 QASVTGPVGSPYEGGVFYLYIQXXXXXXXXXXXXRFLTRILHPNVSR-HGDVGIDSVHHN 369
Q + G +PYEGG+F L I+ +F+T+I HP+VS G + + V +
Sbjct: 382 QGIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNG 441
Query: 370 -WSLALTLSKVLISIQSLLTDPYTAVCMEPELGEMYVRDRARFESLARRWTWRYA 423
W +++T+ KVLI IQS +++ ++ E+ E +R FE A WT R+A
Sbjct: 442 VWPVSMTIYKVLIVIQSWMSNFNEKEPIDVEILEQATNNREVFEKTAEFWTKRFA 496
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 59.3 bits (137), Expect = 5e-09
Identities = 38/131 (29%), Positives = 57/131 (43%), Gaps = 6/131 (4%)
Query: 295 PEGIAATPLDPK----CCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXXXXXXXRFLTRI 350
P+G A P+ + C W +V GP GSP+EGG + + + F T +
Sbjct: 52 PQGYTAKPISFEGADIWCSWICTVPGPRGSPWEGGEYEVSVN-FHKWPIIPPICEFKTPL 110
Query: 351 LHPNVSRHGDVGIDSV-HHNWSLALTLSKVLISIQSLLTDPYTAVCMEPELGEMYVRDRA 409
HPNV G + + + +WS +L K+L I +LL P E Y R
Sbjct: 111 HHPNVDLRGSIYLKMLEQEHWSSETSLKKLLREISNLLATPDLTQAANIEAWMEYENQRE 170
Query: 410 RFESLARRWTW 420
+E+ AR + W
Sbjct: 171 NYEAKARAYAW 181
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 56.4 bits (130), Expect = 4e-08
Identities = 36/135 (26%), Positives = 59/135 (43%), Gaps = 13/135 (9%)
Query: 283 LRIELKMLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXXXXX 342
L +ELK L++ P EG + W + GP + Y+GG F I+
Sbjct: 15 LTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASIRFPSNYPYSPP 74
Query: 343 XXRFLTRILHPNVSRHGDVGIDSVH-------------HNWSLALTLSKVLISIQSLLTD 389
+F T++ HPNV +GD+ I +H W+ ++ +L+S+ SLL +
Sbjct: 75 SMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRTILLSVISLLNE 134
Query: 390 PYTAVCMEPELGEMY 404
P T+ + MY
Sbjct: 135 PNTSSPANVDASVMY 149
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 54.4 bits (125), Expect = 1e-07
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 16/126 (12%)
Query: 314 VTGPVGSPYEGGVFYLYIQX---------------XXXXXXXXXXXRFLTRILHPNVSRH 358
+ GP G+PY GG F + + +F+TRI HPN+S
Sbjct: 57 IKGPEGTPYAGGTFEIKVDIPEHYPFEPPKVTEIIFHIRAFEYIQAKFVTRIWHPNISSQ 116
Query: 359 -GDVGIDSVHHNWSLALTLSKVLISIQSLLTDPYTAVCMEPELGEMYVRDRARFESLARR 417
G + +D + W+ +LTL VL+S+Q++L P + + + + ++ + F + A
Sbjct: 117 TGTICLDILKDKWTASLTLRTVLLSLQAMLCSPEPSDPQDAVVAKQFINNYPMFTATAVY 176
Query: 418 WTWRYA 423
WT +A
Sbjct: 177 WTSYFA 182
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 52.4 bits (120), Expect = 6e-07
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 14/122 (11%)
Query: 283 LRIELKMLRNDPPEGIAATPLDPKCCH-WQASVTGPVGSPYEGGVFYLYIQXXXXXXXXX 341
L+ +L +R P +G +A +D + W+ V GP + YEGG F +
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 342 XXXRFLTRILHPNVSRHGDVGIDSVH-------------HNWSLALTLSKVLISIQSLLT 388
+F++ I HPN+ + G+V I +H W T+ +L+S+ S+LT
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLT 127
Query: 389 DP 390
DP
Sbjct: 128 DP 129
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 49.6 bits (113), Expect = 4e-06
Identities = 37/141 (26%), Positives = 62/141 (43%), Gaps = 6/141 (4%)
Query: 282 RLRIELKMLRNDPPEGIAA--TPLDPKCCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXX 339
RL EL L+++ PEG+ T W+ V G G+ Y G VF L
Sbjct: 8 RLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGPQYPF 67
Query: 340 XXXXXRFLTRIL--HPNVSRHGDVGIDSVHHNWSLALTLSKVLISIQSLLTDPYTAVCME 397
F+ + HP++ +G + + + +W+ AL++ V +SI S+L+ +
Sbjct: 68 NSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSMLSS--SKEKKH 125
Query: 398 PELGEMYVRDRARFESLARRW 418
P +YVR ++ S R W
Sbjct: 126 PIDDAIYVRTCSKNPSKTRWW 146
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 48.8 bits (111), Expect = 7e-06
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 282 RLRIELKMLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGVFYLYI 331
R++ EL L DPP + + HWQA++ GP SPY+GG+F+L I
Sbjct: 5 RIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 48.8 bits (111), Expect = 7e-06
Identities = 28/119 (23%), Positives = 49/119 (41%), Gaps = 2/119 (1%)
Query: 307 CCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXXXXXXXRFLTRILHPNVSR-HGDVGIDS 365
C + GP + YE GV+ + + FL +I HPN+ G V +D
Sbjct: 32 CSEFIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDV 91
Query: 366 VHHNWSLALTLSKVLIS-IQSLLTDPYTAVCMEPELGEMYVRDRARFESLARRWTWRYA 423
++ W+ L+ + + + LLT P A + E +Y+ + R + R+A
Sbjct: 92 INQAWTALYDLTNIFDTFLPQLLTYPNAADPLNGEAARLYIHKPEEYRRTCREYVMRFA 150
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 45.6 bits (103), Expect = 7e-05
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 1/108 (0%)
Query: 317 PVGSPYEGGVFYLYIQXXXXXXXXXXXXRFLTRILHPNVSRHGDVGIDSV-HHNWSLALT 375
P PY G F + I F T+I HPNV G + V NW A
Sbjct: 41 PDKEPYNKGAFKVGITFPVDYPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATK 100
Query: 376 LSKVLISIQSLLTDPYTAVCMEPELGEMYVRDRARFESLARRWTWRYA 423
+V++++ SL+ +P + + ++ E + +D +F A T ++A
Sbjct: 101 TEQVMMALLSLINEPEPSHPIRADVAEEFQKDHKKFMKTAEEHTRKHA 148
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 38.7 bits (86), Expect = 0.008
Identities = 32/156 (20%), Positives = 56/156 (35%), Gaps = 4/156 (2%)
Query: 267 VQAQPAGEENAWRRNRLRIELKMLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGV 326
V AG ++ RL+ + L DP +GI A P + W + G +P+ GG
Sbjct: 8 VSVPAAGTASSSAVRRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGY 67
Query: 327 FYLYIQXXXXXXXXXXXXRFLTRILHPNVSRHGDVGIDSVH-HNWSLALTLSKVLISIQS 385
++ + +T + + I H +W+ T+S +LI + S
Sbjct: 68 YWGKVIFKENFPWSPPAITMITPNGRFQTNTRLCLSISDYHPESWNPGWTVSAILIGLHS 127
Query: 386 LLTDPYTA---VCMEPELGEMYVRDRARFESLARRW 418
+ + A + P+ MY F W
Sbjct: 128 FMNENSPAAGSIAGTPQDQRMYAAASKEFNVKVYNW 163
>L14745-2|AAA27922.2| 461|Caenorhabditis elegans Hypothetical
protein C02F5.7a protein.
Length = 461
Score = 36.7 bits (81), Expect = 0.032
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 168 LSTPRPPDNLAPGLVEH-LPSEVLLCIFSYLDDLSLCACSCVCTRW 212
L T P + L+ LP EVLL +FS+LD +LC + VC W
Sbjct: 42 LITTLSPAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSW 87
>L14745-1|AAM15540.1| 466|Caenorhabditis elegans Hypothetical
protein C02F5.7b protein.
Length = 466
Score = 36.7 bits (81), Expect = 0.032
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 168 LSTPRPPDNLAPGLVEH-LPSEVLLCIFSYLDDLSLCACSCVCTRW 212
L T P + L+ LP EVLL +FS+LD +LC + VC W
Sbjct: 42 LITTLSPAQVDNSLINRVLPKEVLLKVFSFLDTKALCRSAQVCRSW 87
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 36.3 bits (80), Expect = 0.042
Identities = 28/106 (26%), Positives = 45/106 (42%), Gaps = 6/106 (5%)
Query: 304 DPKCCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXXXXXXXRFLTRILHPNVSRHGDVGI 363
D W AS+ GP +PYE ++ L IQ RF T++ V++ V I
Sbjct: 35 DMTLTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGV-I 93
Query: 364 D----SVHHNWSLALTLSKVLISI-QSLLTDPYTAVCMEPELGEMY 404
D + NWS + + VL I ++++ +P G M+
Sbjct: 94 DKRNLTTLRNWSNSYMIKTVLEDIRKNMMMAKENLKLQQPAEGAMF 139
>U64849-1|AAC48052.3| 936|Caenorhabditis elegans Hypothetical
protein K04A8.6 protein.
Length = 936
Score = 36.3 bits (80), Expect = 0.042
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Query: 182 VEHLPSEVLLCIFSYLDDLSLCACSCVCTRWWRLVRA-RVCPGRWEDFAAARWPLYRPLA 240
+ LP E+LL +FS+L D SL ACS V R+ ++ + V + + R PL+ P
Sbjct: 162 INRLPEELLLKVFSFLPDKSLLACSSVSYRFNQISNSHEVWKELYCNLYDYRIPLFHP-- 219
Query: 241 THTDWHKKYQS 251
+H + + QS
Sbjct: 220 SHAKFEFREQS 230
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 36.3 bits (80), Expect = 0.042
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 1/109 (0%)
Query: 282 RLRIELKMLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXXXX 341
RL+ + + L +P + A PL+ W+ + G +PYEGG++ +
Sbjct: 12 RLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFKP 71
Query: 342 XXXRFLTRILHPNVSRHGDVGIDSVH-HNWSLALTLSKVLISIQSLLTD 389
LT + + I H W+ A T+S ++ + S + D
Sbjct: 72 PAILMLTPNGRFQTNTRLCLSISDYHPDTWNPAWTVSTIITGLMSFMND 120
>Z81516-5|CAB04202.1| 219|Caenorhabditis elegans Hypothetical
protein F26H9.7 protein.
Length = 219
Score = 34.3 bits (75), Expect = 0.17
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 314 VTGPVGSPYEGGVFYLYIQXX-XXXXXXXXXXRFLTRILHPNVSRHGD 360
+ GPVGS YEGG F+ I F T I HPN+ ++G+
Sbjct: 68 IDGPVGSIYEGGTFFADINIQPYQNHSLIPRVCFHTFIFHPNLGKYGN 115
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 33.9 bits (74), Expect = 0.22
Identities = 27/123 (21%), Positives = 45/123 (36%), Gaps = 7/123 (5%)
Query: 307 CCHWQASVTGPVGSPYEGGVFYLYIQXXXXXXXXXXXXRFLTRILHPNVSRHGDVGIDSV 366
C H P Y GG F I + LT++ HPN++ G + + +
Sbjct: 57 CLHELELTVTPQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSIL 116
Query: 367 HHN------WSLALTLSKVLISIQSLLTDPYT-AVCMEPELGEMYVRDRARFESLARRWT 419
N W L+ V+ + SL D + + +M+ ++R F R +
Sbjct: 117 RQNSLDQYGWRPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQNRESFNHRVREYI 176
Query: 420 WRY 422
RY
Sbjct: 177 SRY 179
>AF038613-10|AAB92047.1| 148|Caenorhabditis elegans Hypothetical
protein F42A6.2 protein.
Length = 148
Score = 33.1 bits (72), Expect = 0.39
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 5/92 (5%)
Query: 234 PLYRPLATHTDWHKKYQSLVESCFCRNCLVQMCVQAQPAGEENAWRRNRLRIELKMLRND 293
P PL T WH K+Q E+ FC CL++ C + P+ E + L + + +
Sbjct: 21 PTKTPLPTLFFWH-KFQH--EAVFCTFCLIR-CCSSVPSKETREFFLKNLDFQF-LADPE 75
Query: 294 PPEGIAATPLDPKCCHWQASVTGPVGSPYEGG 325
P +AA P +++++ P +P G
Sbjct: 76 PRSTLAAPTPTPAAPELRSTLSAPTPTPAPSG 107
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 32.7 bits (71), Expect = 0.52
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 282 RLRIELKMLRNDPPEGIAATPLDPKCCHWQASVTGPVGSPYEGGVFY 328
RL E LR P E A P++ W ++ G +G+ +EGG+++
Sbjct: 14 RLMKEAMELRQ-PTEMYHAQPMEDNLFEWHFTIRGTLGTDFEGGIYH 59
>Z81531-2|CAB04316.1| 422|Caenorhabditis elegans Hypothetical
protein F36D3.2 protein.
Length = 422
Score = 30.7 bits (66), Expect = 2.1
Identities = 19/64 (29%), Positives = 26/64 (40%), Gaps = 3/64 (4%)
Query: 31 DFEYDNSTCHVC-NGYYGPSFGEPVCVTCHAFLFPDFPSYLPTSYFCTEKTDDGDSGNDE 89
+ Y + C +C +G FG C C AF L Y CT K+ G+DE
Sbjct: 9 EMTYFSVKCAICYKAGHGQHFGVETCRACAAFFRRTV--VLNRKYKCTRKSGKCKIGSDE 66
Query: 90 PSDL 93
D+
Sbjct: 67 TKDV 70
>AF026206-4|AAK39309.1| 535|Caenorhabditis elegans Hypothetical
protein T28B4.1a protein.
Length = 535
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 182 VEHLPSEVLLCIFSYLDDLSLCACSCVCTRW 212
+E LP +VL IF YL + VC RW
Sbjct: 49 IEKLPDKVLRDIFQYLSPKQINQVGLVCKRW 79
>AF026206-3|AAK39308.1| 518|Caenorhabditis elegans Hypothetical
protein T28B4.1b protein.
Length = 518
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 182 VEHLPSEVLLCIFSYLDDLSLCACSCVCTRW 212
+E LP +VL IF YL + VC RW
Sbjct: 32 IEKLPDKVLRDIFQYLSPKQINQVGLVCKRW 62
>AF026206-2|AAT92054.1| 552|Caenorhabditis elegans Hypothetical
protein T28B4.1c protein.
Length = 552
Score = 29.9 bits (64), Expect = 3.6
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 182 VEHLPSEVLLCIFSYLDDLSLCACSCVCTRW 212
+E LP +VL IF YL + VC RW
Sbjct: 66 IEKLPDKVLRDIFQYLSPKQINQVGLVCKRW 96
>AF067216-7|AAC17521.1| 1262|Caenorhabditis elegans Hypothetical
protein C35E7.5a protein.
Length = 1262
Score = 29.5 bits (63), Expect = 4.8
Identities = 13/24 (54%), Positives = 17/24 (70%), Gaps = 1/24 (4%)
Query: 15 LEDNCD-KLVTSYEQPFDFEYDNS 37
+EDNCD + T+ +P DFE DNS
Sbjct: 1109 IEDNCDVESTTTAVEPLDFEDDNS 1132
>U51993-1|AAB36851.2| 377|Caenorhabditis elegans Hypothetical
protein F56F10.2 protein.
Length = 377
Score = 28.7 bits (61), Expect = 8.4
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 181 LVEHLPSEVLLCIFSYLDDLSLCACSCVCTRW 212
+ + S +L +F YLD L C VC +W
Sbjct: 98 IAQDFESHILADVFKYLDIDDLLNCKLVCWKW 129
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.323 0.137 0.465
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,257,266
Number of Sequences: 27539
Number of extensions: 488375
Number of successful extensions: 1100
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 1058
Number of HSP's gapped (non-prelim): 33
length of query: 430
length of database: 12,573,161
effective HSP length: 83
effective length of query: 347
effective length of database: 10,287,424
effective search space: 3569736128
effective search space used: 3569736128
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 61 (28.7 bits)
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