Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001950-TA|BGIBMGA001950-PA|IPR000504|RNA-binding region
RNP-1 (RNA recognition motif)
(231 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical pr... 191 3e-49
U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical p... 105 4e-23
U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical p... 104 5e-23
AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical ... 103 1e-22
Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical pr... 63 1e-10
Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical pr... 60 1e-09
AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous t... 52 5e-07
AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous t... 52 5e-07
AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical... 48 4e-06
AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical ... 48 4e-06
Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical p... 48 6e-06
U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna bi... 48 8e-06
Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical pr... 47 1e-05
Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical pr... 46 2e-05
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 46 2e-05
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 46 2e-05
AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing... 46 2e-05
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 46 2e-05
U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein (spl... 44 7e-05
Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical pr... 44 1e-04
U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein (spl... 44 1e-04
AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural RNA-bi... 44 1e-04
Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical p... 43 2e-04
Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical pr... 43 2e-04
AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical... 43 2e-04
AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein. 43 2e-04
Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 43 2e-04
U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein (sp... 41 7e-04
U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein (spl... 41 7e-04
U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein (spl... 41 7e-04
D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like prot... 41 7e-04
AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a... 41 7e-04
AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a... 41 7e-04
AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a... 41 7e-04
AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a... 41 7e-04
Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical pr... 41 9e-04
Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical pr... 39 0.003
Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical pr... 39 0.003
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 39 0.003
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 39 0.003
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 39 0.003
AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical... 38 0.005
Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical pr... 38 0.006
AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna... 38 0.006
AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna... 38 0.006
AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna... 38 0.006
Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical pr... 38 0.008
Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical pr... 37 0.011
U24123-1|AAA65224.1| 646|Caenorhabditis elegans polyadenylate-b... 37 0.011
AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative RNA-... 37 0.011
AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical ... 37 0.011
AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical ... 37 0.011
AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical ... 37 0.011
AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein... 37 0.011
AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein... 37 0.011
AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization... 37 0.011
AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization... 37 0.011
Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical pr... 37 0.014
Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical pr... 37 0.014
U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical pr... 36 0.032
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 35 0.043
Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical pr... 35 0.043
U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein (sp... 35 0.043
U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein (sp... 35 0.043
U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein (spl... 35 0.043
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 35 0.043
AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor pr... 35 0.043
Z78536-3|CAB01717.1| 270|Caenorhabditis elegans Hypothetical pr... 35 0.057
U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (dele... 35 0.057
AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical ... 35 0.057
AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical ... 35 0.057
AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical ... 35 0.057
AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein. 35 0.057
AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical ... 34 0.075
Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical pr... 34 0.099
Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical pr... 34 0.099
U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myos... 34 0.099
AL117204-23|CAB55151.1| 331|Caenorhabditis elegans Hypothetical... 34 0.099
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 33 0.17
AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical ... 33 0.23
Z32683-13|CAA83626.1| 142|Caenorhabditis elegans Hypothetical p... 32 0.30
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 32 0.40
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 32 0.40
AF038623-3|AAB94153.2| 96|Caenorhabditis elegans Hypothetical ... 31 0.53
Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical pr... 31 0.70
AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical ... 31 0.92
Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical pr... 30 1.2
Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical pr... 30 1.6
Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical pr... 29 2.1
AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical ... 29 2.1
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.8
Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical pr... 29 2.8
U40956-1|AAA81756.1| 516|Caenorhabditis elegans Hypothetical pr... 29 2.8
AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical ... 29 2.8
AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical ... 29 3.7
AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical ... 29 3.7
U10402-3|AAK95874.1| 734|Caenorhabditis elegans Hypothetical pr... 28 4.9
U41552-2|AAC69104.1| 640|Caenorhabditis elegans Hypothetical pr... 28 6.5
U41552-1|AAC69101.2| 640|Caenorhabditis elegans Hypothetical pr... 28 6.5
Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical pr... 27 8.6
Z68319-7|CAA92704.2| 618|Caenorhabditis elegans Hypothetical pr... 27 8.6
AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA ... 27 8.6
>Z81037-3|CAB02750.1| 205|Caenorhabditis elegans Hypothetical
protein C17E4.5 protein.
Length = 205
Score = 191 bits (466), Expect = 3e-49
Identities = 94/175 (53%), Positives = 122/175 (69%), Gaps = 2/175 (1%)
Query: 26 IKARVREMEEEAEKLKQMQTEVDKQMSMG-SPPGLTSPLNMSIEEKIEADNRSVYVGNVD 84
I+ + E+EEE +KLK +Q E+ M++ S +S ++ EEK EAD +SVYVGNVD
Sbjct: 27 IEGDLNEIEEEQKKLKAIQNEMVGHMNLNTSSQSNSSQSLLTPEEKAEADAKSVYVGNVD 86
Query: 85 YGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGR 144
YGATAEE+EQHFHGCGS++RVTI C+++ GHPKGFAY+EF +K+ +Q A+AM +SL RGR
Sbjct: 87 YGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKGFAYVEFTEKEGMQNALAMTDSLLRGR 146
Query: 145 QIKVMPKRTNKPGLSSTNRPPXXXXXXXXXXXXXLAPYYT-GFRPPRRGSASAVG 198
QIKV PKRTNKPG+S+TNRPP + Y GFRP RG+ G
Sbjct: 147 QIKVDPKRTNKPGMSTTNRPPFRGRGGRGRGNVIVKYVYAGGFRPRGRGARRRPG 201
>U23484-10|AAC46772.1| 197|Caenorhabditis elegans Hypothetical
protein EEED8.12 protein.
Length = 197
Score = 105 bits (251), Expect = 4e-23
Identities = 58/129 (44%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
Query: 32 EMEEEAEK--LKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATA 89
EME EAE L+Q+Q ++ K + + T EE+ D +SV++GNVD+ +T
Sbjct: 21 EMEIEAESAILEQIQNKMAKNLESAAYVPPTE------EEQKAIDAKSVFIGNVDFNSTI 74
Query: 90 EELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVM 149
EE+E+HF GCG I R TI +K+ K FAYIEF D S++ A+ M+ SLFR R I V
Sbjct: 75 EEVEEHFKGCGHIVRTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVT 134
Query: 150 PKRTNKPGL 158
KRTN PG+
Sbjct: 135 AKRTNIPGM 143
>U23484-11|AAC46764.2| 191|Caenorhabditis elegans Hypothetical
protein EEED8.4 protein.
Length = 191
Score = 104 bits (250), Expect = 5e-23
Identities = 57/129 (44%), Positives = 79/129 (61%), Gaps = 8/129 (6%)
Query: 32 EMEEEAEK--LKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATA 89
EME EAE L+Q+Q ++ K + + T EE+ D +SV++GNVD+ +T
Sbjct: 15 EMEIEAESAILQQIQNKMAKHLESAAYVPPTE------EEQKAIDAKSVFIGNVDFNSTI 68
Query: 90 EELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKVM 149
EE+E+HF GCG I + TI +K+ K FAYIEF D S++ A+ M+ SLFR R I V
Sbjct: 69 EEIEEHFKGCGQIVKTTIPKDKFTKKQKNFAYIEFDDSSSIENALVMNGSLFRSRPIVVT 128
Query: 150 PKRTNKPGL 158
KRTN PG+
Sbjct: 129 AKRTNIPGM 137
>AF038623-4|AAO91699.1| 177|Caenorhabditis elegans Hypothetical
protein T08B6.5 protein.
Length = 177
Score = 103 bits (246), Expect = 1e-22
Identities = 47/94 (50%), Positives = 66/94 (70%)
Query: 68 EEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDK 127
EE+ + D RSVYVGNVD+ +T E+E+HF CG + RVTI +K+ G+ K FA++EF
Sbjct: 38 EEQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKL 97
Query: 128 DSVQTAMAMDESLFRGRQIKVMPKRTNKPGLSST 161
+SVQ A+ + ++FR R+I V KRTNKPG+ T
Sbjct: 98 ESVQLALVLSGTMFRNRKIMVTLKRTNKPGMGRT 131
>Z81108-1|CAB03236.1| 83|Caenorhabditis elegans Hypothetical
protein R09B3.2 protein.
Length = 83
Score = 68.9 bits (161), Expect = 3e-12
Identities = 33/73 (45%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
SVYVGN + T EEL F G IN V I+C++ G P+GFA+IEF ++ S Q A+
Sbjct: 6 SVYVGNAPFQTTEEELGNFFSSIGQINNVRIVCDRETGRPRGFAFIEFAEEGSAQRAVEQ 65
Query: 136 MDESLFRGRQIKV 148
M+ + F GR ++V
Sbjct: 66 MNGAEFNGRPLRV 78
>Z81106-3|CAB03222.1| 84|Caenorhabditis elegans Hypothetical
protein R06C1.4 protein.
Length = 84
Score = 63.3 bits (147), Expect = 1e-10
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
SVYVGNV Y T EE+ +F G +N V I+ ++ G P+GFA++EF ++ Q A+
Sbjct: 7 SVYVGNVPYQGTEEEIGNYFAAVGHVNNVRIVYDRETGRPRGFAFVEFSEEAGAQRAVEQ 66
Query: 136 MDESLFRGRQIKV 148
++ F GR ++V
Sbjct: 67 LNGVAFNGRNLRV 79
>Z81108-4|CAB03237.1| 85|Caenorhabditis elegans Hypothetical
protein R09B3.3 protein.
Length = 85
Score = 60.5 bits (140), Expect = 1e-09
Identities = 26/73 (35%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAM 136
SVYVGN + T ++L +F G+++ V I+C++ G P+GFA++EF ++ + Q A+
Sbjct: 5 SVYVGNAPFQTTEDDLGNYFSQAGNVSNVRIVCDRETGRPRGFAFVEFTEEAAAQRAVDQ 64
Query: 137 DESL-FRGRQIKV 148
+ F GR ++V
Sbjct: 65 FNGVDFNGRALRV 77
>AC084197-11|AAM44397.1| 305|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform a
protein.
Length = 305
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/82 (23%), Positives = 45/82 (54%)
Query: 74 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
+++ ++VG + E+L HF G + + + ++ +G +GFA++EF + + A
Sbjct: 27 EDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Query: 134 MAMDESLFRGRQIKVMPKRTNK 155
+A E +G+ ++V P ++ +
Sbjct: 87 LAAREQTIKGKSVEVKPAKSRE 108
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 74 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
+N+ V+VG + + ++L HF G ++ + +K + FA+I F +++S A
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 134 MAMDESLFRGRQI---KVMPKRTNKPG 157
+ + F R+ K +P+ PG
Sbjct: 168 SSQTKQTFGTRECDVKKAVPQGKRFPG 194
>AC084197-10|AAY43984.1| 308|Caenorhabditis elegans Homologous to
drosophila sqd (squid)protein protein 1, isoform b
protein.
Length = 308
Score = 51.6 bits (118), Expect = 5e-07
Identities = 19/82 (23%), Positives = 45/82 (54%)
Query: 74 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
+++ ++VG + E+L HF G + + + ++ +G +GFA++EF + + A
Sbjct: 27 EDKKIFVGGISPEVNNEDLSSHFTQYGEVAQAQVKYDRTNGRSRGFAFVEFTTGEGCKLA 86
Query: 134 MAMDESLFRGRQIKVMPKRTNK 155
+A E +G+ ++V P ++ +
Sbjct: 87 LAAREQTIKGKSVEVKPAKSRE 108
Score = 38.7 bits (86), Expect = 0.003
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 74 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
+N+ V+VG + + ++L HF G ++ + +K + FA+I F +++S A
Sbjct: 108 ENKKVFVGGLPSDYSEQDLRSHFEQFGKVDDIEWPFDKQTKARRNFAFIVFEEEESADKA 167
Query: 134 MAMDESLFRGRQI---KVMPKRTNKPG 157
+ + F R+ K +P+ PG
Sbjct: 168 SSQTKQTFGTRECDVKKAVPQGKRFPG 194
>AC024826-10|AAM97977.1| 435|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3c protein.
Length = 435
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 55 SPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDG 114
SPP + L ++ EE+ D R++ + + +LE+ F G++ V I+ + G
Sbjct: 8 SPPK-NAKLELTAEER---DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTG 63
Query: 115 HPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 148
KG Y+EF D++SV +A++ G +++
Sbjct: 64 RSKGICYVEFWDEESVPLGLALNGQRLMGAPLQI 97
>AC024826-8|AAF60795.2| 580|Caenorhabditis elegans Hypothetical
protein Y55F3AM.3a protein.
Length = 580
Score = 48.4 bits (110), Expect = 4e-06
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 4/94 (4%)
Query: 55 SPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDG 114
SPP + L ++ EE+ D R++ + + +LE+ F G++ V I+ + G
Sbjct: 153 SPPK-NAKLELTAEER---DQRTLLIMQIARDTRPRDLEEFFSAVGAVRDVRIITDSRTG 208
Query: 115 HPKGFAYIEFGDKDSVQTAMAMDESLFRGRQIKV 148
KG Y+EF D++SV +A++ G +++
Sbjct: 209 RSKGICYVEFWDEESVPLGLALNGQRLMGAPLQI 242
>Z73102-13|CAA97405.1| 836|Caenorhabditis elegans Hypothetical
protein B0035.12 protein.
Length = 836
Score = 48.0 bits (109), Expect = 6e-06
Identities = 26/76 (34%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 74 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
+ V+V NV + AT +EL+ F G++ V + +K DG PKG A+++F + S Q
Sbjct: 681 EKSKVFVRNVHFQATDDELKALFSKFGTVTSVRRVTHK-DGKPKGIAFVDFDTEASAQKC 739
Query: 134 MAM-DESLFRGRQIKV 148
+A D+ + R R+++V
Sbjct: 740 VASGDKLMLRERELEV 755
Score = 39.9 bits (89), Expect = 0.002
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 2/71 (2%)
Query: 74 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
D R+++V N+D+ T +E+ Q G SI R N H +GFAY+ + Q A
Sbjct: 591 DARTIFVSNLDFTTTEDEIRQAIEGVASI-RFARKANSDLVH-RGFAYVVMENDQKAQQA 648
Query: 134 MAMDESLFRGR 144
+ D +GR
Sbjct: 649 LLKDRVPVKGR 659
>U21320-5|AAA62536.2| 332|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 7 protein.
Length = 332
Score = 47.6 bits (108), Expect = 8e-06
Identities = 24/98 (24%), Positives = 53/98 (54%), Gaps = 1/98 (1%)
Query: 36 EAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQH 95
+AE ++ + + D+ ++ G+ + E R+++VG ++Y + +L +
Sbjct: 64 KAEAKEEKRRQKDELLAYKVEQGIATWNPAENPRASEDPYRTLFVGRINYETSESKLRRE 123
Query: 96 FHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
F G I ++T++ ++ G P+G+A+IE+ DK + TA
Sbjct: 124 FEAYGKIKKLTMVHDEA-GKPRGYAFIEYSDKAEMHTA 160
>Z83127-4|CAB05631.1| 872|Caenorhabditis elegans Hypothetical
protein T23F6.4 protein.
Length = 872
Score = 47.2 bits (107), Expect = 1e-05
Identities = 28/94 (29%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 66 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFG 125
++ EKI R +++ N+ Y ++L+ F G ++ V ++ +K G KGFA +EF
Sbjct: 270 TVREKILETGR-LFLRNLPYATKEDDLQFLFKKYGEVSEVQVVIDKKTGACKGFAIVEFV 328
Query: 126 DKDSVQTA-MAMDESLFRGRQIKVMP---KRTNK 155
++ A A+D +F+GR + ++P KRT +
Sbjct: 329 FPEAAVAAYSALDGYVFKGRMMHILPGDEKRTKE 362
>Z83230-6|CAB05746.1| 336|Caenorhabditis elegans Hypothetical
protein F56A8.6 protein.
Length = 336
Score = 46.4 bits (105), Expect = 2e-05
Identities = 18/63 (28%), Positives = 36/63 (57%)
Query: 72 EADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ 131
+ RSV+VGN+ Y + + + F G++ + ++ ++ G PKG+ +IEF D + +
Sbjct: 14 DRSQRSVFVGNISYDVSEDTIRSIFSKAGNVLSIKMVHDRETGKPKGYGFIEFPDIQTAE 73
Query: 132 TAM 134
A+
Sbjct: 74 VAI 76
>Z77654-1|CAB01127.1| 114|Caenorhabditis elegans Hypothetical
protein C50B8.1 protein.
Length = 114
Score = 46.0 bits (104), Expect = 2e-05
Identities = 26/93 (27%), Positives = 46/93 (49%)
Query: 58 GLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPK 117
G+T+ ++ IE + + ++VY+ +V + +LE +F GSI V + + G +
Sbjct: 7 GVTTNISKLIEARPKNTGQTVYLTHVKWVTGKSQLEHYFKRYGSIQSVNMFYDPDTGLHR 66
Query: 118 GFAYIEFGDKDSVQTAMAMDESLFRGRQIKVMP 150
GFA I F KD A+ + G ++ V P
Sbjct: 67 GFASITFDSKDGANKAIEQRPHVIDGDRVDVEP 99
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 71 IEADNRSVYVGNVDYGATAEEL----EQHFHGCG---SINRVTILCNKYDGHPKGFAYIE 123
+ +R +YVGN+ +G E + Q H CG + +LC K FA+IE
Sbjct: 179 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQI--NLDKNFAFIE 236
Query: 124 FGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 156
F D MA D F G+Q+KV R +P
Sbjct: 237 FRSIDETTAGMAFDGINFMGQQLKVRRPRDYQP 269
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 71 IEADNRSVYVGNVDYGATAEEL----EQHFHGCG---SINRVTILCNKYDGHPKGFAYIE 123
+ +R +YVGN+ +G E + Q H CG + +LC K FA+IE
Sbjct: 179 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQI--NLDKNFAFIE 236
Query: 124 FGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 156
F D MA D F G+Q+KV R +P
Sbjct: 237 FRSIDETTAGMAFDGINFMGQQLKVRRPRDYQP 269
>AC024875-2|AAM44400.1| 471|Caenorhabditis elegans U2af splicing
factor protein 1,isoform d protein.
Length = 471
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 71 IEADNRSVYVGNVDYGATAEEL----EQHFHGCG---SINRVTILCNKYDGHPKGFAYIE 123
+ +R +YVGN+ +G E + Q H CG + +LC K FA+IE
Sbjct: 154 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQI--NLDKNFAFIE 211
Query: 124 FGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 156
F D MA D F G+Q+KV R +P
Sbjct: 212 FRSIDETTAGMAFDGINFMGQQLKVRRPRDYQP 244
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 46.0 bits (104), Expect = 2e-05
Identities = 30/93 (32%), Positives = 42/93 (45%), Gaps = 9/93 (9%)
Query: 71 IEADNRSVYVGNVDYGATAEEL----EQHFHGCG---SINRVTILCNKYDGHPKGFAYIE 123
+ +R +YVGN+ +G E + Q H CG + +LC K FA+IE
Sbjct: 157 VTCQSRRLYVGNIPFGCNEEAMLDFFNQQMHLCGLAQAPGNPILLCQI--NLDKNFAFIE 214
Query: 124 FGDKDSVQTAMAMDESLFRGRQIKVMPKRTNKP 156
F D MA D F G+Q+KV R +P
Sbjct: 215 FRSIDETTAGMAFDGINFMGQQLKVRRPRDYQP 247
>U23484-2|AAC46767.1| 196|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform a protein.
Length = 196
Score = 44.4 bits (100), Expect = 7e-05
Identities = 30/117 (25%), Positives = 50/117 (42%), Gaps = 2/117 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
S+ + N+ Y T +L + F G I V I +KY KGF ++ F ++ + A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 136 MDESLFRGRQIKVMPKRTNKPGLSSTNRPPXXXXXXXXX-XXXXLAPYYTGFRPPRR 191
D L GR+++V + ++P R +P Y+ R PRR
Sbjct: 80 TDGKLVDGRELRVTLAKYDRPSDERGGRGGGGGRRRSRSPRRRSRSPRYSRSRSPRR 136
>Z35601-1|CAA84667.2| 320|Caenorhabditis elegans Hypothetical
protein R10E9.1 protein.
Length = 320
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 74 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
D +++G + + TAE L +F G +N ++ + +GF +I F D SV
Sbjct: 43 DPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Query: 134 MAMDESLFRGRQI--KV-MPKRTNKPGLSSTNR 163
+ E G++I KV PKRT ++ T +
Sbjct: 103 LNNREHELDGKKIDPKVAFPKRTQAKLVTKTKK 135
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 68 EEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDK 127
+ K+ + V++G + +T E+++Q+F G + ++ +K +GF ++ F D
Sbjct: 126 QAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF-DS 184
Query: 128 DSV 130
D V
Sbjct: 185 DEV 187
>U23484-3|AAK68298.1| 126|Caenorhabditis elegans Sr protein
(splicing factor) protein4, isoform b protein.
Length = 126
Score = 43.6 bits (98), Expect = 1e-04
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
S+ + N+ Y T +L + F G I V I +KY KGF ++ F ++ + A+
Sbjct: 20 SLKIDNLSYQTTPNDLRRTFERYGDIGDVHIPRDKYSRQSKGFGFVRFYERRDAEHALDR 79
Query: 136 MDESLFRGRQIKVMPKRTNKP 156
D L GR+++V + ++P
Sbjct: 80 TDGKLVDGRELRVTLAKYDRP 100
>AB036738-1|BAB13470.1| 320|Caenorhabditis elegans neural
RNA-binding protein MSI-1 protein.
Length = 320
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 74 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
D +++G + + TAE L +F G +N ++ + +GF +I F D SV
Sbjct: 43 DPGKMFIGGLSWQTTAENLRDYFGRFGEVNECMVMRDPATKRARGFGFITFVDPSSVDKV 102
Query: 134 MAMDESLFRGRQI--KV-MPKRTNKPGLSSTNR 163
+ E G++I KV PKRT ++ T +
Sbjct: 103 LNNREHELDGKKIDPKVAFPKRTQAKLVTKTKK 135
Score = 36.7 bits (81), Expect = 0.014
Identities = 15/63 (23%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 68 EEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDK 127
+ K+ + V++G + +T E+++Q+F G + ++ +K +GF ++ F D
Sbjct: 126 QAKLVTKTKKVFIGGLSATSTLEDMKQYFETYGKVEDAMLMFDKATQRHRGFGFVTF-DS 184
Query: 128 DSV 130
D V
Sbjct: 185 DEV 187
>Z49911-11|CAA90135.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 70 KIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 129
K+E R+VYVGN+ G E+ + F+ + + D P +AY+EF + S
Sbjct: 157 KVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQAS 216
Query: 130 VQTAMAMDESLFRGRQIKVMPKR 152
V A+ D F+ R +K+ R
Sbjct: 217 VCNALQNDGFEFKERPLKIQHSR 239
>Z36948-6|CAA85414.2| 452|Caenorhabditis elegans Hypothetical
protein D2089.1a protein.
Length = 452
Score = 43.2 bits (97), Expect = 2e-04
Identities = 25/83 (30%), Positives = 40/83 (48%)
Query: 70 KIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 129
K+E R+VYVGN+ G E+ + F+ + + D P +AY+EF + S
Sbjct: 157 KVEEIRRTVYVGNLPKGVDGNEVLELFNMYFGEVMYARMASGPDALPCAYAYVEFSQQAS 216
Query: 130 VQTAMAMDESLFRGRQIKVMPKR 152
V A+ D F+ R +K+ R
Sbjct: 217 VCNALQNDGFEFKERPLKIQHSR 239
>AL132904-14|CAC35847.2| 258|Caenorhabditis elegans Hypothetical
protein Y111B2A.18 protein.
Length = 258
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 73 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQ 131
++++ VYVGN+ +E+E FH G I V I G FA++EF D +D+
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHRDAED 61
Query: 132 TAMAMDESLFRGRQIKV 148
A D F GR+I+V
Sbjct: 62 AVRARDGYEFDGRRIRV 78
>AF242767-1|AAG36874.1| 258|Caenorhabditis elegans SF2 protein.
Length = 258
Score = 43.2 bits (97), Expect = 2e-04
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 5/77 (6%)
Query: 73 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQ 131
++++ VYVGN+ +E+E FH G I V I G FA++EF D +D+
Sbjct: 6 SEDQKVYVGNLPGDVREKEVEDIFHKYGRIKYVDI----KSGRGPAFAFVEFEDHRDAED 61
Query: 132 TAMAMDESLFRGRQIKV 148
A D F GR+I+V
Sbjct: 62 AVRARDGYEFDGRRIRV 78
>Z50044-2|CAA90354.1| 256|Caenorhabditis elegans Hypothetical
protein F22B5.2 protein.
Length = 256
Score = 42.7 bits (96), Expect = 2e-04
Identities = 32/104 (30%), Positives = 50/104 (48%), Gaps = 9/104 (8%)
Query: 32 EMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEE 91
+++EEA+ K TE D+ M+MG P I+ +D + V N+ +E
Sbjct: 141 QLDEEADADKD--TEKDR-MAMGMRPD-----GRQIDRN-RSDENTCRVTNLPQEMNEDE 191
Query: 92 LEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 135
L F G + R+ I +K G PKGFA++ F +D A+A
Sbjct: 192 LRDLFGKIGRVIRIFIARDKVTGLPKGFAFVTFESRDDAARAIA 235
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 42.7 bits (96), Expect = 2e-04
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 76 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM- 134
R++YVGN+D T + + F+ GS+ + ++ +DG +A++EF D A+
Sbjct: 46 RTLYVGNLDSTVTEDFIATLFNQIGSVTKTKVI---FDGSNDPYAFVEFSDHGQASQALQ 102
Query: 135 AMDESLFRGRQIKV 148
M++ L R++KV
Sbjct: 103 TMNKRLLLDREMKV 116
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 67 IEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD 126
I + DN SVYVGN+ T +E+ Q F G I V I +G+A+++F +
Sbjct: 232 IYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDN 284
Query: 127 KDSVQTAMAMDESLFRGRQI 146
KD+ A+ + G Q+
Sbjct: 285 KDAAAKAIVQMNNQDVGGQL 304
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/80 (18%), Positives = 36/80 (45%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 137
V+VG++ ++L + F G ++ ++ + KG+ ++ + ++ + A+
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 138 ESLFRGRQIKVMPKRTNKPG 157
+ GR+ T KPG
Sbjct: 197 NGQWLGRRTIRTNWATRKPG 216
>U41007-10|AAL32214.1| 118|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform c protein.
Length = 118
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQTAMAM 136
VYVG + AT++ELE+ F G I +V + P GFA++E+ D +D+ A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVA-----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 137 DESLFRGRQIKV 148
D S G + +V
Sbjct: 60 DGSRICGVRARV 71
>U41007-9|AAL32213.1| 153|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform b protein.
Length = 153
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQTAMAM 136
VYVG + AT++ELE+ F G I +V + P GFA++E+ D +D+ A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVA-----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 137 DESLFRGRQIKV 148
D S G + +V
Sbjct: 60 DGSRICGVRARV 71
>U41007-8|AAA82270.1| 179|Caenorhabditis elegans Sr protein
(splicing factor) protein6, isoform a protein.
Length = 179
Score = 41.1 bits (92), Expect = 7e-04
Identities = 25/72 (34%), Positives = 39/72 (54%), Gaps = 6/72 (8%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQTAMAM 136
VYVG + AT++ELE+ F G I +V + P GFA++E+ D +D+ A+
Sbjct: 5 VYVGGLPSDATSQELEEIFDRFGRIRKVWVA-----RRPPGFAFVEYDDVRDAEDAVRAL 59
Query: 137 DESLFRGRQIKV 148
D S G + +V
Sbjct: 60 DGSRICGVRARV 71
>D10877-1|BAA01645.1| 346|Caenorhabditis elegans hnRNP like protein
protein.
Length = 346
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 76 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 135
+ +YV V T + L ++F G++ + I+ +K P+GF ++ F D DSV +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 136 MDESLFRGRQIKV 148
+ G + V
Sbjct: 174 QKSHMVNGHRCDV 186
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 64 NMSIEEKIEADN-RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYI 122
N S + +E +N R ++VG + T + + + + G I + ++ + +GF ++
Sbjct: 10 NGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFV 69
Query: 123 EFGDKDSVQTAMAMDESLFRGRQIKVMPKR 152
F K V AM + G+ + PKR
Sbjct: 70 TFSGKTEVDAAMKQRPHIIDGKTVD--PKR 97
>AF038613-8|AAL02515.2| 309|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform b protein.
Length = 309
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 76 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 135
+ +YV V T + L ++F G++ + I+ +K P+GF ++ F D DSV +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 136 MDESLFRGRQIKV 148
+ G + V
Sbjct: 136 QKSHMVNGHRCDV 148
>AF038613-7|ABB51185.1| 308|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform c protein.
Length = 308
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 76 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 135
+ +YV V T + L ++F G++ + I+ +K P+GF ++ F D DSV +
Sbjct: 76 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 135
Query: 136 MDESLFRGRQIKV 148
+ G + V
Sbjct: 136 QKSHMVNGHRCDV 148
>AF038613-6|ABB51186.1| 347|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform d protein.
Length = 347
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 76 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 135
+ +YV V T + L ++F G++ + I+ +K P+GF ++ F D DSV +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 136 MDESLFRGRQIKV 148
+ G + V
Sbjct: 174 QKSHMVNGHRCDV 186
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 64 NMSIEEKIEADN-RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYI 122
N S + +E +N R ++VG + T + + + + G I + ++ + +GF ++
Sbjct: 10 NGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFV 69
Query: 123 EFGDKDSVQTAMAMDESLFRGRQIKVMPKR 152
F K V AM + G+ + PKR
Sbjct: 70 TFSGKTEVDAAMKQRPHIIDGKTVD--PKR 97
>AF038613-5|AAB92051.1| 346|Caenorhabditis elegans Human hnrnp a1
homolog protein1, isoform a protein.
Length = 346
Score = 41.1 bits (92), Expect = 7e-04
Identities = 19/73 (26%), Positives = 35/73 (47%)
Query: 76 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 135
+ +YV V T + L ++F G++ + I+ +K P+GF ++ F D DSV +
Sbjct: 114 KRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVL 173
Query: 136 MDESLFRGRQIKV 148
+ G + V
Sbjct: 174 QKSHMVNGHRCDV 186
Score = 37.9 bits (84), Expect = 0.006
Identities = 21/90 (23%), Positives = 41/90 (45%), Gaps = 3/90 (3%)
Query: 64 NMSIEEKIEADN-RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYI 122
N S + +E +N R ++VG + T + + + + G I + ++ + +GF ++
Sbjct: 10 NGSGDASLEPENLRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFV 69
Query: 123 EFGDKDSVQTAMAMDESLFRGRQIKVMPKR 152
F K V AM + G+ + PKR
Sbjct: 70 TFSGKTEVDAAMKQRPHIIDGKTVD--PKR 97
>Z36752-6|CAA85327.1| 456|Caenorhabditis elegans Hypothetical
protein F35H8.5 protein.
Length = 456
Score = 40.7 bits (91), Expect = 9e-04
Identities = 32/131 (24%), Positives = 49/131 (37%), Gaps = 3/131 (2%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
++YV + T ELE F G I IL + G KG ++ F KD A+
Sbjct: 129 NLYVSGIPKSMTLHELESIFRPFGQIITSRILSDNVTGLSKGVGFVRFDKKDEADVAIKT 188
Query: 136 MDESLFRGRQIKVMPKRTNKPGLSSTNRPPXXXXXXXXXXXXXLAPYYTGF-RPPRRGSA 194
++ S+ G ++ K N P S+ + L P T P R +A
Sbjct: 189 LNGSIPSGCSEQITVKFANNPA-SNNPKGLLSDLEAVQQAATTLVPLSTILGAPTLRATA 247
Query: 195 SAVGQWKRVPL 205
+G P+
Sbjct: 248 GGIGPMHHAPI 258
>Z50110-2|CAA90446.1| 566|Caenorhabditis elegans Hypothetical
protein F18H3.3b protein.
Length = 566
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSV-QTAMA 135
+V+V N E+L F G I ++ + G PKGF ++ F D+D+ Q
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDA-QGKPKGFGFVAFADQDAAGQAVEK 297
Query: 136 MDESLFRGRQIKVMPKRTNK 155
+++S+ G K+ R K
Sbjct: 298 LNDSILEGTDCKLSVCRAQK 317
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAM 136
++YV N++ + L HF G+I ++ ++ +G KGF ++ F +K TA
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCF-EKPEEATAAVT 401
Query: 137 D 137
D
Sbjct: 402 D 402
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 62 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAY 121
P N+ S+Y+G++ + L + F G + + + + G+AY
Sbjct: 43 PTNIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAY 102
Query: 122 IEFGDKDSVQTAM-AMDESLFRGRQIKVM 149
+ F + A+ M+ + GR +++M
Sbjct: 103 VNFQQPADAERALDTMNFEVIHGRPMRIM 131
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 73 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQT 132
A N ++++ N+D + + F G+I + + +G+ KG+ ++ F + S QT
Sbjct: 142 AGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD-EGNSKGYGFVHFETEHSAQT 200
Query: 133 AM 134
A+
Sbjct: 201 AI 202
>Z50110-1|CAA90444.1| 692|Caenorhabditis elegans Hypothetical
protein F18H3.3a protein.
Length = 692
Score = 39.1 bits (87), Expect = 0.003
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 2/80 (2%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSV-QTAMA 135
+V+V N E+L F G I ++ + G PKGF ++ F D+D+ Q
Sbjct: 239 NVFVKNFGEHLDQEKLSAMFSKFGEITSAVVMTDA-QGKPKGFGFVAFADQDAAGQAVEK 297
Query: 136 MDESLFRGRQIKVMPKRTNK 155
+++S+ G K+ R K
Sbjct: 298 LNDSILEGTDCKLSVCRAQK 317
Score = 32.7 bits (71), Expect = 0.23
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 2/61 (3%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAM 136
++YV N++ + L HF G+I ++ ++ +G KGF ++ F +K TA
Sbjct: 344 NLYVKNIEEDLNDDGLRDHFSSFGTITSAKVMVDE-NGRSKGFGFVCF-EKPEEATAAVT 401
Query: 137 D 137
D
Sbjct: 402 D 402
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/89 (19%), Positives = 37/89 (41%), Gaps = 1/89 (1%)
Query: 62 PLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAY 121
P N+ S+Y+G++ + L + F G + + + + G+AY
Sbjct: 43 PTNIGYPPNATYSMASLYIGDLHPDVSEAMLFEKFSMAGPVLSIRVCRDNTSRLSLGYAY 102
Query: 122 IEFGDKDSVQTAM-AMDESLFRGRQIKVM 149
+ F + A+ M+ + GR +++M
Sbjct: 103 VNFQQPADAERALDTMNFEVIHGRPMRIM 131
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 73 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQT 132
A N ++++ N+D + + F G+I + + +G+ KG+ ++ F + S QT
Sbjct: 142 AGNGNIFIKNLDRVIDNKSVYDTFSLFGNILSCKVATDD-EGNSKGYGFVHFETEHSAQT 200
Query: 133 AM 134
A+
Sbjct: 201 AI 202
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 67 IEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD 126
I + DN SVYVGN+ T +E+ Q F G I V I +G+A+++F +
Sbjct: 119 IYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDN 171
Query: 127 KDSVQTAMAMDESLFRGRQI 146
KD+ A+ + G Q+
Sbjct: 172 KDAAAKAIVQMNNQDVGGQL 191
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/80 (18%), Positives = 36/80 (45%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 137
V+VG++ ++L + F G ++ ++ + KG+ ++ + ++ + A+
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 138 ESLFRGRQIKVMPKRTNKPG 157
+ GR+ T KPG
Sbjct: 84 NGQWLGRRTIRTNWATRKPG 103
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 67 IEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD 126
I + DN SVYVGN+ T +E+ Q F G I V I +G+A+++F +
Sbjct: 129 IYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDN 181
Query: 127 KDSVQTAMAMDESLFRGRQI 146
KD+ A+ + G Q+
Sbjct: 182 KDAAAKAIVQMNNQDVGGQL 201
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/80 (18%), Positives = 36/80 (45%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 137
V+VG++ ++L + F G ++ ++ + KG+ ++ + ++ + A+
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 138 ESLFRGRQIKVMPKRTNKPG 157
+ GR+ T KPG
Sbjct: 94 NGQWLGRRTIRTNWATRKPG 113
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 38.7 bits (86), Expect = 0.003
Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 7/80 (8%)
Query: 67 IEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD 126
I + DN SVYVGN+ T +E+ Q F G I V I +G+A+++F +
Sbjct: 200 IYNQTSGDNTSVYVGNI-ASLTEDEIRQGFASFGRITEVRIF------KMQGYAFVKFDN 252
Query: 127 KDSVQTAMAMDESLFRGRQI 146
KD+ A+ + G Q+
Sbjct: 253 KDAAAKAIVQMNNQDVGGQL 272
Score = 31.1 bits (67), Expect = 0.70
Identities = 15/80 (18%), Positives = 36/80 (45%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 137
V+VG++ ++L + F G ++ ++ + KG+ ++ + ++ + A+
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 138 ESLFRGRQIKVMPKRTNKPG 157
+ GR+ T KPG
Sbjct: 165 NGQWLGRRTIRTNWATRKPG 184
>AC084197-23|AAM44389.1| 610|Caenorhabditis elegans Hypothetical
protein Y73B6BL.33 protein.
Length = 610
Score = 38.3 bits (85), Expect = 0.005
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 76 RSVYVG--NVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
RS Y+ + + AT +++ + F G +I RV +C G P G AY+EF + + A
Sbjct: 62 RSQYIRLRGLPFNATEKDIHEFFAGL-TIERVKFVCTT--GRPNGEAYVEFKNTEEAGKA 118
Query: 134 MAMDESLFRGRQIKV 148
M D R I+V
Sbjct: 119 MENDRKEISNRYIEV 133
>Z49910-5|CAA90120.1| 411|Caenorhabditis elegans Hypothetical
protein F44G4.4a protein.
Length = 411
Score = 37.9 bits (84), Expect = 0.006
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 4/96 (4%)
Query: 71 IEADNRSV--YVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKD 128
+E D++ V V VD+ T E +++F G++ I K DG+ KGF ++
Sbjct: 166 VERDSQPVDLIVLGVDFKTTDECFQKYFEDIGTVVFCEIK-RKSDGNSKGFGFVRMSSVG 224
Query: 129 SVQTAMAMDESLFRGRQIKV-MPKRTNKPGLSSTNR 163
+A+ + + GR+ V +P +K G S +R
Sbjct: 225 EQNKVLAIPQHMIDGRRCDVKVPDGRDKQGRPSISR 260
>AC024791-23|AAM81102.1| 346|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform c protein.
Length = 346
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-AM 136
+YVG++ + + L + F G I + + + GH K FA++E+ ++ A +M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 137 DESLFRGRQIKV 148
+ + GR +KV
Sbjct: 164 NGQMLGGRNLKV 175
>AC024791-22|AAF60676.1| 339|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform a protein.
Length = 339
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-AM 136
+YVG++ + + L + F G I + + + GH K FA++E+ ++ A +M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 137 DESLFRGRQIKV 148
+ + GR +KV
Sbjct: 164 NGQMLGGRNLKV 175
>AC024791-21|AAF60666.1| 749|Caenorhabditis elegans Rnp (rrm rna
binding domain) containingprotein 6, isoform b protein.
Length = 749
Score = 37.9 bits (84), Expect = 0.006
Identities = 19/72 (26%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-AM 136
+YVG++ + + L + F G I + + + GH K FA++E+ ++ A +M
Sbjct: 104 IYVGSISFEIREDMLRRAFDPFGPIKSINMSWDPATGHHKTFAFVEYEVPEAALLAQESM 163
Query: 137 DESLFRGRQIKV 148
+ + GR +KV
Sbjct: 164 NGQMLGGRNLKV 175
>Z78419-2|CAB01702.1| 154|Caenorhabditis elegans Hypothetical
protein F26A3.2 protein.
Length = 154
Score = 37.5 bits (83), Expect = 0.008
Identities = 14/58 (24%), Positives = 33/58 (56%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
++YVGN+ Y +++ + F G + RV + +++ P GF ++E+ ++ + A+
Sbjct: 38 TLYVGNLSYYTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL 95
>Z81473-3|CAB03896.4| 514|Caenorhabditis elegans Hypothetical
protein C17D12.2 protein.
Length = 514
Score = 37.1 bits (82), Expect = 0.011
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 72 EADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ 131
+ D ++VG + ++L F G I TIL +KY G KG A++ + +DS
Sbjct: 25 DPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAV 84
Query: 132 TAMAM--DESLFRG--RQIKVMPKRTN 154
A D+ G R ++V P T+
Sbjct: 85 RCQATLHDQKTLPGMNRAMQVKPADTD 111
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 70 KIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEF 124
K + D++ +++G + + +E+ F G ++ VT+L DG KG A++++
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVL-RGADGASKGCAFVKY 171
>U24123-1|AAA65224.1| 646|Caenorhabditis elegans
polyadenylate-binding protein protein.
Length = 646
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
+VYV N E LE+ F G+I ++ +G KGF ++ F + + +TA+ A
Sbjct: 214 NVYVKNFGDHYNKETLEKVFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQA 271
Query: 136 MDESLFRGRQIKVMPKRTNK 155
+ +S G +K+ R K
Sbjct: 272 LHDSTIEGTDLKLHVCRAQK 291
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
++YV N+D + L++ F G+I ++ ++ +G KGF ++ F + +A+
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAV 374
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
S+YVG++ L + F G + + + + G+AY+ F + AM
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 136 MDESLFRGRQIKVM 149
M+ G+ +++M
Sbjct: 93 MNFEALHGKPMRIM 106
>AY342388-1|AAQ19851.1| 514|Caenorhabditis elegans putative
RNA-binding protein protein.
Length = 514
Score = 37.1 bits (82), Expect = 0.011
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 4/87 (4%)
Query: 72 EADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ 131
+ D ++VG + ++L F G I TIL +KY G KG A++ + +DS
Sbjct: 25 DPDAIKLFVGQIPRNLEEKDLRHLFEQFGKIYEFTILKDKYTGMHKGCAFLTYCHRDSAV 84
Query: 132 TAMAM--DESLFRG--RQIKVMPKRTN 154
A D+ G R ++V P T+
Sbjct: 85 RCQATLHDQKTLPGMNRAMQVKPADTD 111
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/55 (25%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 70 KIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEF 124
K + D++ +++G + + +E+ F G ++ VT+L DG KG A++++
Sbjct: 118 KDKMDDKKLFIGMLSKQQSEDEVRALFATFGELDEVTVL-RGADGASKGCAFVKY 171
>AL032631-4|CAE54917.1| 586|Caenorhabditis elegans Hypothetical
protein Y106G6H.2c protein.
Length = 586
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
+VYV N E LE+ F G+I ++ +G KGF ++ F + + +TA+ A
Sbjct: 154 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQA 211
Query: 136 MDESLFRGRQIKVMPKRTNK 155
+ +S G +K+ R K
Sbjct: 212 LHDSTIEGTDLKLHVCRAQK 231
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
++YV N+D + L++ F G+I ++ ++ +G KGF ++ F + +A+
Sbjct: 258 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAV 314
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
S+YVG++ L + F G + + + + G+AY+ F + AM
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 136 MDESLFRGRQIKVM 149
M+ G+ +++M
Sbjct: 93 MNFEALHGKPMRIM 106
>AL032631-3|CAE54916.1| 583|Caenorhabditis elegans Hypothetical
protein Y106G6H.2b protein.
Length = 583
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
+VYV N E LE+ F G+I ++ +G KGF ++ F + + +TA+ A
Sbjct: 151 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQA 208
Query: 136 MDESLFRGRQIKVMPKRTNK 155
+ +S G +K+ R K
Sbjct: 209 LHDSTIEGTDLKLHVCRAQK 228
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
++YV N+D + L++ F G+I ++ ++ +G KGF ++ F + +A+
Sbjct: 255 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAV 311
>AL032631-2|CAA21572.1| 646|Caenorhabditis elegans Hypothetical
protein Y106G6H.2a protein.
Length = 646
Score = 37.1 bits (82), Expect = 0.011
Identities = 23/80 (28%), Positives = 39/80 (48%), Gaps = 3/80 (3%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
+VYV N E LE+ F G+I ++ +G KGF ++ F + + +TA+ A
Sbjct: 214 NVYVKNFGDHYNKETLEKLFAKFGNITSCEVMT--VEGKSKGFGFVAFANPEEAETAVQA 271
Query: 136 MDESLFRGRQIKVMPKRTNK 155
+ +S G +K+ R K
Sbjct: 272 LHDSTIEGTDLKLHVCRAQK 291
Score = 30.3 bits (65), Expect = 1.2
Identities = 14/58 (24%), Positives = 31/58 (53%), Gaps = 1/58 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
++YV N+D + L++ F G+I ++ ++ +G KGF ++ F + +A+
Sbjct: 318 NLYVKNLDETVDDDGLKKQFESYGNITSAKVMTDE-NGRSKGFGFVCFEKPEEATSAV 374
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/74 (21%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM-A 135
S+YVG++ L + F G + + + + G+AY+ F + AM
Sbjct: 33 SLYVGDLHPDVNESILFEKFSAAGPVLSIRVCRDNATRLSLGYAYVNFQQPADAERAMDT 92
Query: 136 MDESLFRGRQIKVM 149
M+ G+ +++M
Sbjct: 93 MNFEALHGKPMRIM 106
>AJ297847-1|CAC16732.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 75 NRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 129
+R+V++G + TAEE+ Q F G + VTI ++ G+PKG A + F ++DS
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF-ERDS 371
>AJ297846-1|CAC16731.1| 619|Caenorhabditis elegans FOG-1 protein
protein.
Length = 619
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 75 NRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 129
+R+V++G + TAEE+ Q F G + VTI ++ G+PKG A + F ++DS
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF-ERDS 371
>AC024810-13|AAK68518.1| 405|Caenorhabditis elegans Feminization of
germline protein1, isoform a protein.
Length = 405
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 75 NRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 129
+R+V++G + TAEE+ Q F G + VTI ++ G+PKG A + F ++DS
Sbjct: 104 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF-ERDS 157
>AC024810-12|AAK68519.1| 619|Caenorhabditis elegans Feminization of
germline protein1, isoform b protein.
Length = 619
Score = 37.1 bits (82), Expect = 0.011
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 75 NRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDS 129
+R+V++G + TAEE+ Q F G + VTI ++ G+PKG A + F ++DS
Sbjct: 318 HRTVFLGGLPRIVTAEEIAQMFSEFGVVLLVTIDIDQDYGYPKGAARVTF-ERDS 371
>Z97628-2|CAB10726.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.7 bits (81), Expect = 0.014
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 31 REMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAE 90
+E E+E + +++ E+ ++ L ++ +++ +N ++V ++ T E
Sbjct: 197 KEDEDEGKTAEEIAEELQQREMAEQAQILEMVGDLKDADEVPPEN-VLFVCKLNPVTTDE 255
Query: 91 ELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA-MAMDESLFRGRQIKV 148
+LE F G IN I+ ++ G +A+IEF + S + A MD L R+I V
Sbjct: 256 DLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 314
>Z81080-5|CAB03088.2| 427|Caenorhabditis elegans Hypothetical
protein F39H2.2a protein.
Length = 427
Score = 36.7 bits (81), Expect = 0.014
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 31 REMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAE 90
+E E+E + +++ E+ ++ L ++ +++ +N ++V ++ T E
Sbjct: 197 KEDEDEGKTAEEIAEELQQREMAEQAQILEMVGDLKDADEVPPEN-VLFVCKLNPVTTDE 255
Query: 91 ELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA-MAMDESLFRGRQIKV 148
+LE F G IN I+ ++ G +A+IEF + S + A MD L R+I V
Sbjct: 256 DLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 314
>Z81080-2|CAD56584.1| 358|Caenorhabditis elegans Hypothetical
protein F39H2.2b protein.
Length = 358
Score = 36.7 bits (81), Expect = 0.014
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 2/119 (1%)
Query: 31 REMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAE 90
+E E+E + +++ E+ ++ L ++ +++ +N ++V ++ T E
Sbjct: 128 KEDEDEGKTAEEIAEELQQREMAEQAQILEMVGDLKDADEVPPEN-VLFVCKLNPVTTDE 186
Query: 91 ELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA-MAMDESLFRGRQIKV 148
+LE F G IN I+ ++ G +A+IEF + S + A MD L R+I V
Sbjct: 187 DLEIIFSRFGKINNCEIVRDRRSGDSLQYAFIEFDNAKSCEQAFFKMDNVLIDDRRIHV 245
>U23450-2|AAK31468.1| 302|Caenorhabditis elegans Hypothetical
protein C30B5.4 protein.
Length = 302
Score = 35.5 bits (78), Expect = 0.032
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 2/64 (3%)
Query: 74 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
D+ +Y+G + Y + ++ F G + + ++ +K G KGFA++ + KD T
Sbjct: 36 DSAWIYIGGLSYALSEGDVIAVFSQYGEVMNINLIRDKDTGKSKGFAFLCY--KDQRSTI 93
Query: 134 MAMD 137
+A+D
Sbjct: 94 LAVD 97
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 35.1 bits (77), Expect = 0.043
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 66 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYD-GHPKGFAYIEF 124
S EK +++VGN+D + L F G I +V + D G KGFA+I F
Sbjct: 90 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 149
Query: 125 GDKDSVQTAM-AMDESLFRGRQIKV 148
++ TA+ AM+ R I V
Sbjct: 150 ASFEASDTALEAMNGQFLCNRAITV 174
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEF-GDKDSVQTAMA 135
++YVG +D + L + G + V + ++ + +GF ++EF G++D+
Sbjct: 14 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 73
Query: 136 MDESLFRGRQIKV 148
++ G+ IKV
Sbjct: 74 LNMIKLYGKPIKV 86
>Z35663-4|CAA84724.1| 307|Caenorhabditis elegans Hypothetical
protein T04A8.6 protein.
Length = 307
Score = 35.1 bits (77), Expect = 0.043
Identities = 16/56 (28%), Positives = 31/56 (55%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
V + + +G +EL +F G++ R+ + N+ G+ KG+AY+ F +K + A
Sbjct: 34 VKIKRIPFGFFEKELLGYFRQFGNVLRIRVARNRRTGNHKGWAYVGFDNKAVAEIA 89
>U28738-11|AAK68399.3| 166|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform b protein.
Length = 166
Score = 35.1 bits (77), Expect = 0.043
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQTAMAM 136
+Y+G + Y A ++E+ G G IN +++ KY GFA+++F D +D+ +
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDACHDL 55
Query: 137 DESLFRGRQIKVM 149
D G ++++
Sbjct: 56 DGKTMEGSSMRLV 68
>U28738-10|AAK72066.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform d protein.
Length = 208
Score = 35.1 bits (77), Expect = 0.043
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQTAMAM 136
+Y+G + Y A ++E+ G G IN +++ KY GFA+++F D +D+ +
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDACHDL 55
Query: 137 DESLFRGRQIKVM 149
D G ++++
Sbjct: 56 DGKTMEGSSMRLV 68
>U28738-9|AAA68314.3| 208|Caenorhabditis elegans Sr protein
(splicing factor) protein5, isoform a protein.
Length = 208
Score = 35.1 bits (77), Expect = 0.043
Identities = 19/73 (26%), Positives = 38/73 (52%), Gaps = 9/73 (12%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGD-KDSVQTAMAM 136
+Y+G + Y A ++E+ G G IN +++ KY GFA+++F D +D+ +
Sbjct: 4 LYLGKIPYNARERDVERFLKGYGKINNISM---KY-----GFAFVDFEDSRDAEDACHDL 55
Query: 137 DESLFRGRQIKVM 149
D G ++++
Sbjct: 56 DGKTMEGSSMRLV 68
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 35.1 bits (77), Expect = 0.043
Identities = 27/85 (31%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 66 SIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYD-GHPKGFAYIEF 124
S EK +++VGN+D + L F G I +V + D G KGFA+I F
Sbjct: 100 SAHEKNMDVGANIFVGNLDPEVDEKLLYDTFSAFGVILQVPKIMRDVDSGTSKGFAFINF 159
Query: 125 GDKDSVQTAM-AMDESLFRGRQIKV 148
++ TA+ AM+ R I V
Sbjct: 160 ASFEASDTALEAMNGQFLCNRAITV 184
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 1/73 (1%)
Query: 77 SVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEF-GDKDSVQTAMA 135
++YVG +D + L + G + V + ++ + +GF ++EF G++D+
Sbjct: 24 TIYVGGLDEKVSESILWELMVQAGPVVSVNMPKDRVTANHQGFGFVEFMGEEDADYAIKI 83
Query: 136 MDESLFRGRQIKV 148
++ G+ IKV
Sbjct: 84 LNMIKLYGKPIKV 96
>AF047662-1|AAC04442.1| 248|Caenorhabditis elegans Suppressor
protein 12 protein.
Length = 248
Score = 35.1 bits (77), Expect = 0.043
Identities = 14/71 (19%), Positives = 33/71 (46%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 137
++VG + Y + + L ++F G I ++ ++ +G+ ++ D+ S + A
Sbjct: 37 IFVGGLPYHTSDKTLHEYFEQFGDIEEAVVITDRNTQKSRGYGFVTMKDRASAERACKDP 96
Query: 138 ESLFRGRQIKV 148
+ GR+ V
Sbjct: 97 NPIIDGRKANV 107
>Z78536-3|CAB01717.1| 270|Caenorhabditis elegans Hypothetical
protein C07A4.1 protein.
Length = 270
Score = 34.7 bits (76), Expect = 0.057
Identities = 24/83 (28%), Positives = 38/83 (45%), Gaps = 7/83 (8%)
Query: 72 EADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKD-SV 130
+ADN SVYVGN+ T +L F G I V I + +A++ + K+ +
Sbjct: 125 KADNTSVYVGNISQQTTDADLRDLFSTYGDIAEVRIF------KTQRYAFVRYEKKECAT 178
Query: 131 QTAMAMDESLFRGRQIKVMPKRT 153
+ M M+ G Q++ RT
Sbjct: 179 KAIMEMNGKEMAGNQVRCSWGRT 201
Score = 30.7 bits (66), Expect = 0.92
Identities = 13/58 (22%), Positives = 30/58 (51%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMA 135
V+VG++ + E L+ F G ++ ++ + KG+ ++ F +K + + A+A
Sbjct: 29 VFVGDLSKDVSNELLKSTFTKFGEVSEAKVIRDVQTQKSKGYGFVSFPNKQNAENAIA 86
>U39997-3|AAK68389.1| 498|Caenorhabditis elegans Human daz (deleted
in azoospermia)homolog protein 1 protein.
Length = 498
Score = 34.7 bits (76), Expect = 0.057
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ--TAMA 135
++VG T EL +HF ++ V ++ DG KG+ +I F +D + +
Sbjct: 68 IFVGGFPTSTTETELREHFEKFFAVKDVKMV-KSLDGQSKGYGFITFETEDQAEEIRKLT 126
Query: 136 MDESLFRGRQIKVMP 150
+ FR R++ + P
Sbjct: 127 PKQLEFRSRKLNLGP 141
>AF098501-6|AAL38960.1| 315|Caenorhabditis elegans Hypothetical
protein H28G03.1b protein.
Length = 315
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 76 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
R +++G + + T E+L +F G + ++ + H +GF ++ F S ++AM
Sbjct: 49 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 107
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 88 TAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDES--LFRGRQ 145
+ + L +F G++++V IL G P+G ++ + DK+S +A + + R+
Sbjct: 160 SVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERK 214
Query: 146 IKVMPKRTNKPGLSSTNRP 164
I+V + G + RP
Sbjct: 215 IEVRVFTKHPNGSTYWKRP 233
>AF098501-5|AAM69104.1| 335|Caenorhabditis elegans Hypothetical
protein H28G03.1c protein.
Length = 335
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 76 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
R +++G + + T E+L +F G + ++ + H +GF ++ F S ++AM
Sbjct: 69 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 127
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 88 TAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDES--LFRGRQ 145
+ + L +F G++++V IL G P+G ++ + DK+S +A + + R+
Sbjct: 180 SVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERK 234
Query: 146 IKVMPKRTNKPGLSSTNRP 164
I+V + G + RP
Sbjct: 235 IEVRVFTKHPNGSTYWKRP 253
>AF098501-4|AAL38959.1| 336|Caenorhabditis elegans Hypothetical
protein H28G03.1a protein.
Length = 336
Score = 34.7 bits (76), Expect = 0.057
Identities = 14/59 (23%), Positives = 30/59 (50%)
Query: 76 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
R +++G + + T E+L +F G + ++ + H +GF ++ F S ++AM
Sbjct: 70 RKLFIGGLSHDTTDEQLGNYFSQWGPVVDAIVIRDPNTKHSRGFGFVTFASIFSAESAM 128
Score = 29.1 bits (62), Expect = 2.8
Identities = 19/79 (24%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 88 TAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDES--LFRGRQ 145
+ + L +F G++++V IL G P+G ++ + DK+S +A + + R+
Sbjct: 181 SVDSLRVYFETFGTLDQVEIL-----GQPRGLGFVIYEDKESADRCLAHNSGRHIVNERK 235
Query: 146 IKVMPKRTNKPGLSSTNRP 164
I+V + G + RP
Sbjct: 236 IEVRVFTKHPNGSTYWKRP 254
>AB025253-1|BAA88577.1| 499|Caenorhabditis elegans DAZ-1 protein.
Length = 499
Score = 34.7 bits (76), Expect = 0.057
Identities = 19/75 (25%), Positives = 35/75 (46%), Gaps = 3/75 (4%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQ--TAMA 135
++VG T EL +HF ++ V ++ DG KG+ +I F +D + +
Sbjct: 69 IFVGGFPTSTTETELREHFEKFFAVKDVKMV-KSLDGQSKGYGFITFETEDQAEEIRKLT 127
Query: 136 MDESLFRGRQIKVMP 150
+ FR R++ + P
Sbjct: 128 PKQLEFRSRKLNLGP 142
>AL110485-8|CAB60356.1| 434|Caenorhabditis elegans Hypothetical
protein Y46G5A.13 protein.
Length = 434
Score = 34.3 bits (75), Expect = 0.075
Identities = 24/74 (32%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 73 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQT 132
ADN SVYVGN+ +E+ + F G IN V +G+A+++F K+S
Sbjct: 253 ADNTSVYVGNI-ANLGEDEIRRAFDRFGPINEVRTF------KIQGYAFVKFETKESAAR 305
Query: 133 AMAMDESLFRGRQI 146
A+ + G QI
Sbjct: 306 AIVQMNNADIGGQI 319
>Z75552-9|CAA99945.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 33.9 bits (74), Expect = 0.099
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 41 KQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCG 100
+Q Q V QM M PG +P S ++K D+ V+VGN+ + E + + + CG
Sbjct: 17 QQQQQIVFGQMRM---PGQHTPAQQSSQQK--PDSSPVFVGNISDKCSDEFIRKILNECG 71
Query: 101 SINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRG-RQIKVMP 150
++ + +G +GF + F D + A+ + G +++ V P
Sbjct: 72 NVASWKRIKGS-NGKLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKP 121
>Z75551-6|CAA99937.2| 705|Caenorhabditis elegans Hypothetical
protein W04D2.6a protein.
Length = 705
Score = 33.9 bits (74), Expect = 0.099
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 7/111 (6%)
Query: 41 KQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCG 100
+Q Q V QM M PG +P S ++K D+ V+VGN+ + E + + + CG
Sbjct: 17 QQQQQIVFGQMRM---PGQHTPAQQSSQQK--PDSSPVFVGNISDKCSDEFIRKILNECG 71
Query: 101 SINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMDESLFRG-RQIKVMP 150
++ + +G +GF + F D + A+ + G +++ V P
Sbjct: 72 NVASWKRIKGS-NGKLQGFGFCHFTDLEGTLRALRILHEFHLGDKKLTVKP 121
>U41990-2|AAA83339.2| 1963|Caenorhabditis elegans Non-muscle myosin
protein 1 protein.
Length = 1963
Score = 33.9 bits (74), Expect = 0.099
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 4/72 (5%)
Query: 26 IKARVREMEEEAEKLKQ-MQTEVDKQM-SMGSPPGLTSPLNM--SIEEKIEADNRSVYVG 81
++A++ ++EEE E+ + + +DKQ + +T+ L+M ++ +K EA+ +S+
Sbjct: 1728 LEAKIAQLEEELEEEQSNCELAIDKQRKAQVQLEQITTDLSMERTLNQKTEAEKQSLERS 1787
Query: 82 NVDYGATAEELE 93
N DY A ELE
Sbjct: 1788 NRDYKAKITELE 1799
>AL117204-23|CAB55151.1| 331|Caenorhabditis elegans Hypothetical
protein Y116A8C.34 protein.
Length = 331
Score = 33.9 bits (74), Expect = 0.099
Identities = 21/74 (28%), Positives = 36/74 (48%), Gaps = 1/74 (1%)
Query: 76 RSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFG-DKDSVQTAM 134
R++YVG T + L F G + ++I + G +GF ++EF +D+
Sbjct: 11 RTLYVGGFTEDVTEKVLMAAFIPFGDVVAISIPMDYESGKHRGFGFVEFDMAEDAAMAID 70
Query: 135 AMDESLFRGRQIKV 148
M+ES G+ I+V
Sbjct: 71 NMNESELFGKTIRV 84
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 33.1 bits (72), Expect = 0.17
Identities = 28/87 (32%), Positives = 46/87 (52%), Gaps = 4/87 (4%)
Query: 74 DNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
+ R++YV N E LE+ F G + +V IL + D + K FA +EF D+ SV A
Sbjct: 11 EERTIYVANFSEEVDEELLEELFIQAGPVVKV-ILRDVRDSNAK-FALVEFEDELSVLFA 68
Query: 134 M-AMDESLFRGRQIKVMPKR-TNKPGL 158
+ M+ ++++V P+ TN+ L
Sbjct: 69 IELMNGVRLFNQELQVKPRNGTNQEEL 95
>AF099918-1|AAK29840.2| 820|Caenorhabditis elegans Hypothetical
protein H05C05.1a protein.
Length = 820
Score = 32.7 bits (71), Expect = 0.23
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 6/86 (6%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAMAMD 137
V + N+ EEL +F G I RV I K DG+ A E+ +D + A+
Sbjct: 81 VQITNISSQHVEEELIYYFGGESHIKRVDI--RKEDGN----AEFEYFTRDGLLLALKKQ 134
Query: 138 ESLFRGRQIKVMPKRTNKPGLSSTNR 163
+ F+GR +KV ++ + T+R
Sbjct: 135 DVEFKGRVLKVFVRQNRESVARVTSR 160
>Z32683-13|CAA83626.1| 142|Caenorhabditis elegans Hypothetical
protein R07E5.14 protein.
Length = 142
Score = 32.3 bits (70), Expect = 0.30
Identities = 17/72 (23%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEF-GDKDSVQTAMAM 136
V+V N+ AT +++ F G I + + ++ G KG+A +E+ K++ +
Sbjct: 57 VFVTNIHEEATEDDVHDKFSEYGKIKNIHLNLDRRTGFLKGYALVEYETQKEANEAIDQS 116
Query: 137 DESLFRGRQIKV 148
+++ G+ +KV
Sbjct: 117 NDTDLLGQNVKV 128
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 26 IKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDY 85
+K R R EE+E+ + +V K + PPG+ S ++ + +E++ + N Y
Sbjct: 254 VKRRSRTSTEESEE--KTSNDVQKNLETDVPPGIRSAIDAAAQEELPVRRQGRRSANFGY 311
Query: 86 G 86
G
Sbjct: 312 G 312
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 31.9 bits (69), Expect = 0.40
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 26 IKARVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDY 85
+K R R EE+E+ + +V K + PPG+ S ++ + +E++ + N Y
Sbjct: 254 VKRRSRTSTEESEE--KTSNDVQKNLETDVPPGIRSAIDAAAQEELPVRRQGRRSANFGY 311
Query: 86 G 86
G
Sbjct: 312 G 312
>AF038623-3|AAB94153.2| 96|Caenorhabditis elegans Hypothetical
protein T08B6.1 protein.
Length = 96
Score = 31.5 bits (68), Expect = 0.53
Identities = 13/30 (43%), Positives = 18/30 (60%)
Query: 132 TAMAMDESLFRGRQIKVMPKRTNKPGLSST 161
+A+ + FR R++ V KRTNKPG T
Sbjct: 27 SALVLSGFKFRNRKVTVTTKRTNKPGFGKT 56
>Z82073-7|CAB04922.2| 327|Caenorhabditis elegans Hypothetical
protein W06D12.1 protein.
Length = 327
Score = 31.1 bits (67), Expect = 0.70
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 2/73 (2%)
Query: 37 AEKLKQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGA--TAEELEQ 94
+ K++ + D+++S PPG P N + +K + + N DY A +ELE
Sbjct: 148 SSKMQNLDVMTDRKVSDDIPPGFPRPQNNTKLQKSQKFSTDAMTSNSDYSADFLDDELED 207
Query: 95 HFHGCGSINRVTI 107
I VT+
Sbjct: 208 EVDKMSRIPSVTM 220
>AC024844-6|AAK29956.1| 442|Caenorhabditis elegans Hypothetical
protein Y65B4A.1 protein.
Length = 442
Score = 30.7 bits (66), Expect = 0.92
Identities = 34/137 (24%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 30 VREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSPLN-MSIEEKIEADNRSVYVGNVDYGAT 88
++E +A+K + + E ++ +G G + + + +K+ A VYV N+ T
Sbjct: 136 LQEKAAKAQKEDEEKKEKKRKKKVGLGAGEDAKEGWLDLGDKVHA----VYVSNLPEDIT 191
Query: 89 AEELEQHFHGCG----SINRVTILCNKY---DGHPKGFAYIEFGDKDSVQTAM-AMDESL 140
EE ++ CG I C Y +G KG + K+SV+ A +D +
Sbjct: 192 DEEFQKFMSKCGVIQPDIRTNKPKCKLYREENGKLKGDGRCCYIKKESVELACNILDGAN 251
Query: 141 FRGRQIKVMPKRTNKPG 157
GR++KV R G
Sbjct: 252 LNGREVKVEEARFEMKG 268
>Z81038-2|CAB02757.1| 454|Caenorhabditis elegans Hypothetical
protein C25A1.4 protein.
Length = 454
Score = 30.3 bits (65), Expect = 1.2
Identities = 19/75 (25%), Positives = 36/75 (48%), Gaps = 1/75 (1%)
Query: 73 ADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQT 132
++NR V++ N+ Y A +L+ G L +G PKG A +EF ++ +
Sbjct: 42 SNNRMVFITNIAYEARWVDLKSLVREKGGEVAFCELLEDRNGKPKGNAVVEFETREGAEK 101
Query: 133 AMA-MDESLFRGRQI 146
+ + + ++GR I
Sbjct: 102 CVENLQKFDWKGRTI 116
>Z66521-4|CAD59160.1| 150|Caenorhabditis elegans Hypothetical
protein W02B12.3c protein.
Length = 150
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
+Y+G + + +++E F G G I V + GF ++EF DK + A+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
>Z66521-3|CAD59159.1| 148|Caenorhabditis elegans Hypothetical
protein W02B12.3b protein.
Length = 148
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
+Y+G + + +++E F G G I V + GF ++EF DK + A+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
>Z66521-2|CAA91395.1| 312|Caenorhabditis elegans Hypothetical
protein W02B12.3a protein.
Length = 312
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/57 (26%), Positives = 27/57 (47%), Gaps = 8/57 (14%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTAM 134
+Y+G + + +++E F G G I V + GF ++EF DK + A+
Sbjct: 5 IYIGRLTSRVSEKDIEHFFRGYGQIRDVLL--------KNGFGFVEFDDKRDAEDAV 53
>Z99279-4|CAB16494.1| 121|Caenorhabditis elegans Hypothetical
protein Y57G11A.5 protein.
Length = 121
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/25 (48%), Positives = 17/25 (68%)
Query: 68 EEKIEADNRSVYVGNVDYGATAEEL 92
+ K +NR VYVGN+ + AT +EL
Sbjct: 9 KRKRNVENRQVYVGNMPFDATEKEL 33
>AL137227-1|CAB70238.2| 611|Caenorhabditis elegans Hypothetical
protein F58D5.1 protein.
Length = 611
Score = 29.5 bits (63), Expect = 2.1
Identities = 17/73 (23%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 78 VYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDK-DSVQTAMAM 136
+YVG++ + L F G I + ++ + G +G+A++ + +K D+ A
Sbjct: 202 IYVGHIPTDVFEDTLVPLFEKSGKIWDLRLMMDPMSGASRGYAFVTYCNKEDAAAAAKTY 261
Query: 137 D-ESLFRGRQIKV 148
D + G+ +KV
Sbjct: 262 DGHEISTGKPLKV 274
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 29.1 bits (62), Expect = 2.8
Identities = 21/97 (21%), Positives = 45/97 (46%), Gaps = 4/97 (4%)
Query: 64 NMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIE 123
N + + ++ + V N+ T ++L F G IN+ ++ ++ G+ +GF +I
Sbjct: 64 NQQYDRENPQPSKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIY 123
Query: 124 FG-DKDSVQTAMAMDESLFRGRQIKV---MPKRTNKP 156
F +D+ + + G +I+V + KR + P
Sbjct: 124 FNLIEDATAARDKLCNTDLDGHKIRVDFSLTKRGHSP 160
>Z81120-1|CAB03342.1| 207|Caenorhabditis elegans Hypothetical
protein T12D8.2 protein.
Length = 207
Score = 29.1 bits (62), Expect = 2.8
Identities = 18/77 (23%), Positives = 40/77 (51%), Gaps = 7/77 (9%)
Query: 79 YVGNVDYGATAEELEQHFHGCGSINR------VTILCNKYDGHPKGFAYIEFGDKDSVQT 132
++G + Y + A ++E C + + ++ ++ G KGFAY+ F ++ + T
Sbjct: 9 FIGGLPYDSIATDIETILKHCKFTDEELKKFDIHLVHDRDSGSFKGFAYVTFENEQQMNT 68
Query: 133 AMA-MDESLFRGRQIKV 148
A++ ++ + F R +KV
Sbjct: 69 AISGLNGADFGNRVLKV 85
>U40956-1|AAA81756.1| 516|Caenorhabditis elegans Hypothetical
protein ZK402.5 protein.
Length = 516
Score = 29.1 bits (62), Expect = 2.8
Identities = 17/52 (32%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 31 REMEEEAEKLKQ-MQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVG 81
RE+EE +++K+ + T VDK++ G+ ++I KI+A YVG
Sbjct: 401 RELEELKQQIKKSIGTNVDKKILFAELRGVFEAFLITINRKIKATACPCYVG 452
>AF040642-5|AAN73870.2| 138|Caenorhabditis elegans Hypothetical
protein C50D2.5 protein.
Length = 138
Score = 29.1 bits (62), Expect = 2.8
Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)
Query: 75 NRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFAYIEFGDKDSVQTA 133
NR +Y+ N+ Y T EE+ + F G++ ++ + +G A++ + D +TA
Sbjct: 18 NRILYIKNLPYKITTEEMYEIFGKFGAVRQIRV---GNTAETRGTAFVVYEDIFDAKTA 73
>AL110490-7|CAD59175.1| 533|Caenorhabditis elegans Hypothetical
protein Y48B6A.6b protein.
Length = 533
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 29 RVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSP 62
R+++ EE E L Q Q +V Q+ PP TSP
Sbjct: 171 RMKKYTEEMESLVQKQVDVLDQIMSSPPPPPTSP 204
>AL110490-6|CAB54442.2| 687|Caenorhabditis elegans Hypothetical
protein Y48B6A.6a protein.
Length = 687
Score = 28.7 bits (61), Expect = 3.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 29 RVREMEEEAEKLKQMQTEVDKQMSMGSPPGLTSP 62
R+++ EE E L Q Q +V Q+ PP TSP
Sbjct: 171 RMKKYTEEMESLVQKQVDVLDQIMSSPPPPPTSP 204
>U10402-3|AAK95874.1| 734|Caenorhabditis elegans Hypothetical
protein C34E10.5 protein.
Length = 734
Score = 28.3 bits (60), Expect = 4.9
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 41 KQMQTEVDKQMSMGSPPGLTSPLNMSIEEKIEADNRSVYVGNVDYGA-TAEELEQH 95
+Q+ + ++QMS GS P SP + SI +EA N +++G + AE L++H
Sbjct: 13 QQVAEQHEEQMSSGSSPKSNSP-SRSI-SSVEAANSRIHIGWMATTLDVAENLDRH 66
>U41552-2|AAC69104.1| 640|Caenorhabditis elegans Hypothetical
protein K07E3.4a protein.
Length = 640
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 84 DYGATAEELEQHFH--GCGSINRVTILCNKYDGHPKGFAYI 122
+YGA + +H+ G G++ L N GHPK F ++
Sbjct: 480 EYGAFDAVVSEHWSQGGAGAVALANSLVNATTGHPKQFKFL 520
>U41552-1|AAC69101.2| 640|Caenorhabditis elegans Hypothetical
protein K07E3.4b protein.
Length = 640
Score = 27.9 bits (59), Expect = 6.5
Identities = 13/41 (31%), Positives = 21/41 (51%), Gaps = 2/41 (4%)
Query: 84 DYGATAEELEQHFH--GCGSINRVTILCNKYDGHPKGFAYI 122
+YGA + +H+ G G++ L N GHPK F ++
Sbjct: 480 EYGAFDAVVSEHWSQGGAGAVALANSLVNATTGHPKQFKFL 520
>Z70038-8|CAA93887.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/88 (20%), Positives = 34/88 (38%)
Query: 61 SPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFA 120
+P+ E + DN + + A+ + Q F G + LC +G G
Sbjct: 166 APILEDQEVGADGDNVVCRARGLPWQASDHHVAQFFAGLDIVPGGIALCLSSEGRRNGEV 225
Query: 121 YIEFGDKDSVQTAMAMDESLFRGRQIKV 148
++F ++S A+ + R I+V
Sbjct: 226 LVQFSSQESRDLALKRHRNFLLSRYIEV 253
>Z68319-7|CAA92704.2| 618|Caenorhabditis elegans Hypothetical
protein ZK1067.6 protein.
Length = 618
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/88 (20%), Positives = 34/88 (38%)
Query: 61 SPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFA 120
+P+ E + DN + + A+ + Q F G + LC +G G
Sbjct: 166 APILEDQEVGADGDNVVCRARGLPWQASDHHVAQFFAGLDIVPGGIALCLSSEGRRNGEV 225
Query: 121 YIEFGDKDSVQTAMAMDESLFRGRQIKV 148
++F ++S A+ + R I+V
Sbjct: 226 LVQFSSQESRDLALKRHRNFLLSRYIEV 253
>AY220985-1|AAO65265.1| 618|Caenorhabditis elegans putative RNA
binding protein SYM-2 protein.
Length = 618
Score = 27.5 bits (58), Expect = 8.6
Identities = 18/88 (20%), Positives = 34/88 (38%)
Query: 61 SPLNMSIEEKIEADNRSVYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKGFA 120
+P+ E + DN + + A+ + Q F G + LC +G G
Sbjct: 166 APILEDQEVGADGDNVVCRARGLPWQASDHHVAQFFAGLDIVPGGIALCLSSEGRRNGEV 225
Query: 121 YIEFGDKDSVQTAMAMDESLFRGRQIKV 148
++F ++S A+ + R I+V
Sbjct: 226 LVQFSSQESRDLALKRHRNFLLSRYIEV 253
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.316 0.133 0.389
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,178,776
Number of Sequences: 27539
Number of extensions: 197509
Number of successful extensions: 749
Number of sequences better than 10.0: 108
Number of HSP's better than 10.0 without gapping: 82
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 600
Number of HSP's gapped (non-prelim): 154
length of query: 231
length of database: 12,573,161
effective HSP length: 79
effective length of query: 152
effective length of database: 10,397,580
effective search space: 1580432160
effective search space used: 1580432160
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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