GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001949-TA|BGIBMGA001949-PA|IPR001547|Glycoside
hydrolase, family 5, IPR011028|Cyclin-like,
IPR002720|Retinoblastoma-associated protein, A-box
         (723 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcript...    27   1.7  
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    26   3.0  
U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.          25   5.3  
DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.    25   5.3  
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    25   5.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    25   5.3  
AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    25   5.3  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    25   9.3  
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    25   9.3  

>AB090812-2|BAC57900.1| 1173|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1173

 Score = 27.1 bits (57), Expect = 1.7
 Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 4/40 (10%)

Query: 198  STLCEIKDGLSKEATTMKEYSWKPVIDSFFEKGILKGNSE 237
            S +CE     +K+ TT+ +  W     S FE+G+L  N++
Sbjct: 1008 SNVCEA----AKQITTILQREWDDFRTSLFEQGVLADNAQ 1043


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
           cytoskeletal structural protein protein.
          Length = 1645

 Score = 26.2 bits (55), Expect = 3.0
 Identities = 18/57 (31%), Positives = 24/57 (42%), Gaps = 3/57 (5%)

Query: 255 LNNLY---ETYVLSVGEFDERIFLGEQANEQIGMKNKVSGDEISEVIANFGPSGRAC 308
           LNNL    E  V  +G FD     G   +E+ G          S +I + GPS  +C
Sbjct: 503 LNNLLCDAEATVHELGNFDGSQAGGLAGSERTGTGTNAGKTTFSNIIGSSGPSVTSC 559


>U28809-1|AAC47326.1|  140|Anopheles gambiae lysozyme protein.
          Length = 140

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 671 INSLVWCDTGLGSGVGLKRALEGALDSD 698
           IN+  WCD+G GS    K A +  L+ D
Sbjct: 75  INNKYWCDSGYGSN-DCKIACKNLLNDD 101


>DQ007317-1|AAY24699.1|  140|Anopheles gambiae lysozyme c-1 protein.
          Length = 140

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)

Query: 671 INSLVWCDTGLGSGVGLKRALEGALDSD 698
           IN+  WCD+G GS    K A +  L+ D
Sbjct: 75  INNKYWCDSGYGSN-DCKIACKNLLNDD 101


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 538  SPFRRTNGLQSPVSTIDRFMSPMA 561
            SP + TNG  SP +T  RF +P A
Sbjct: 1340 SPCKPTNGSLSPSATHSRFSTPGA 1363


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1978

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 12/24 (50%), Positives = 15/24 (62%)

Query: 538  SPFRRTNGLQSPVSTIDRFMSPMA 561
            SP + TNG  SP +T  RF +P A
Sbjct: 1337 SPCKPTNGSLSPSATHSRFSTPGA 1360


>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 25.4 bits (53), Expect = 5.3
 Identities = 12/27 (44%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 309 PDTPLTGRRYLSRRS-EELTPVSEAKN 334
           P+TP+TG+R    R+ EE      AKN
Sbjct: 177 PETPMTGKRSRKARTPEEAEDAKRAKN 203


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.6 bits (51), Expect = 9.3
 Identities = 11/36 (30%), Positives = 13/36 (36%)

Query: 619 PLPTGRCEARSPAGTRVSERHQLYVKPLTDPPPQHH 654
           P P     + SP G      H L+      PPP  H
Sbjct: 800 PHPHSALSSHSPVGAGSHHLHHLHHHAAQQPPPGSH 835


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 24.6 bits (51), Expect = 9.3
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 4/38 (10%)

Query: 71  ISRLEHKFAVSSVLF----RKFQPIFMELFVGLTNEPV 104
           ++ L  KF+ +S+      ++ QP+F   F+G TN P+
Sbjct: 631 VATLPRKFSTASITEEQQQQQQQPLFYSNFIGTTNMPM 668


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.135    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 747,140
Number of Sequences: 2123
Number of extensions: 31021
Number of successful extensions: 59
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 54
Number of HSP's gapped (non-prelim): 9
length of query: 723
length of database: 516,269
effective HSP length: 69
effective length of query: 654
effective length of database: 369,782
effective search space: 241837428
effective search space used: 241837428
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 51 (24.6 bits)