GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001947-TA|BGIBMGA001947-PA|IPR001723|Steroid hormone
receptor, IPR000536|Nuclear hormone receptor, ligand-binding,
IPR008946|Nuclear receptor, ligand-binding
         (166 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF515524-1|AAM61891.1|  218|Anopheles gambiae glutathione S-tran...    23   4.9  

>AF515524-1|AAM61891.1|  218|Anopheles gambiae glutathione
          S-transferase u3 protein.
          Length = 218

 Score = 23.0 bits (47), Expect = 4.9
 Identities = 10/22 (45%), Positives = 13/22 (59%)

Query: 17 AFTELHLDDQVALLRAHAGEHL 38
          A   L LD +V ++   AGEHL
Sbjct: 21 ALRNLDLDAEVKIVNLFAGEHL 42


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.143    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 136,391
Number of Sequences: 2123
Number of extensions: 4411
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 5
Number of HSP's gapped (non-prelim): 1
length of query: 166
length of database: 516,269
effective HSP length: 59
effective length of query: 107
effective length of database: 391,012
effective search space: 41838284
effective search space used: 41838284
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 45 (22.2 bits)