Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001947-TA|BGIBMGA001947-PA|IPR001723|Steroid hormone
receptor, IPR000536|Nuclear hormone receptor, ligand-binding,
IPR008946|Nuclear receptor, ligand-binding
(166 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY204174-1|AAO39178.1| 344|Caenorhabditis elegans nuclear recep... 85 2e-17
AY204173-1|AAO39177.1| 369|Caenorhabditis elegans nuclear recep... 85 2e-17
AY204172-1|AAO39176.1| 234|Caenorhabditis elegans nuclear recep... 85 2e-17
AF043694-2|AAT27251.1| 387|Caenorhabditis elegans Nuclear hormo... 85 2e-17
AF043694-1|AAC24283.1| 412|Caenorhabditis elegans Nuclear hormo... 85 2e-17
Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical pr... 83 1e-16
AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear recep... 83 1e-16
Z83235-7|CAD57703.1| 486|Caenorhabditis elegans Hypothetical pr... 82 2e-16
Z83235-6|CAD57702.1| 501|Caenorhabditis elegans Hypothetical pr... 82 2e-16
Z83235-5|CAD21653.1| 476|Caenorhabditis elegans Hypothetical pr... 82 2e-16
Z83235-4|CAB05772.1| 477|Caenorhabditis elegans Hypothetical pr... 82 2e-16
AF332206-1|AAK17977.1| 381|Caenorhabditis elegans nuclear recep... 82 2e-16
AF273795-1|AAG15143.1| 475|Caenorhabditis elegans nuclear recep... 82 2e-16
AF273793-1|AAG15141.1| 474|Caenorhabditis elegans nuclear recep... 82 2e-16
AF273792-1|AAG15140.1| 337|Caenorhabditis elegans nuclear recep... 82 2e-16
U41542-10|AAX88836.1| 486|Caenorhabditis elegans Nuclear hormon... 74 5e-14
U41542-9|AAK39150.3| 542|Caenorhabditis elegans Nuclear hormone... 74 5e-14
AY305836-1|AAR11981.1| 487|Caenorhabditis elegans nuclear recep... 74 5e-14
AF273781-1|AAG15130.1| 508|Caenorhabditis elegans nuclear recep... 74 5e-14
U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone... 56 1e-08
AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear recep... 56 2e-08
U97551-2|AAP13776.1| 434|Caenorhabditis elegans Nuclear hormone... 54 4e-08
U97551-1|AAP13775.1| 435|Caenorhabditis elegans Nuclear hormone... 54 4e-08
AF083229-1|AAD03687.1| 288|Caenorhabditis elegans nuclear recep... 54 4e-08
U46670-2|AAC48174.4| 440|Caenorhabditis elegans Nuclear hormone... 54 7e-08
U46670-1|AAP46277.1| 445|Caenorhabditis elegans Nuclear hormone... 54 7e-08
AY204166-1|AAO39170.1| 436|Caenorhabditis elegans nuclear recep... 54 7e-08
AY204165-1|AAO39169.1| 445|Caenorhabditis elegans nuclear recep... 54 7e-08
AY204164-1|AAO39168.1| 440|Caenorhabditis elegans nuclear recep... 54 7e-08
AY204163-1|AAO39167.1| 440|Caenorhabditis elegans nuclear recep... 54 7e-08
Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical p... 44 6e-05
AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical ... 44 6e-05
AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear recep... 44 6e-05
AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear recep... 44 6e-05
AY204185-1|AAO39189.1| 400|Caenorhabditis elegans nuclear recep... 42 2e-04
AL022272-4|CAC42310.2| 391|Caenorhabditis elegans Hypothetical ... 42 2e-04
Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AF273830-1|AAG15179.1| 598|Caenorhabditis elegans nuclear recep... 41 5e-04
AC006671-1|AAF39914.2| 593|Caenorhabditis elegans Nuclear hormo... 41 5e-04
U41296-1|AAA93297.1| 579|Caenorhabditis elegans Steroid hormone... 40 0.001
AY204170-1|AAO39174.1| 579|Caenorhabditis elegans nuclear recep... 40 0.001
AF067936-1|AAC19212.2| 579|Caenorhabditis elegans Nuclear hormo... 40 0.001
AC006674-1|AAK68390.1| 388|Caenorhabditis elegans Nuclear hormo... 40 0.001
AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear recep... 39 0.002
AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear horm... 39 0.002
Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical pr... 38 0.003
Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical pr... 38 0.003
AY204177-1|AAO39181.1| 385|Caenorhabditis elegans nuclear recep... 38 0.003
AL022272-2|CAA18351.1| 385|Caenorhabditis elegans Hypothetical ... 38 0.003
AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear recep... 38 0.004
AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear recep... 38 0.004
Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z68217-10|CAE46673.1| 631|Caenorhabditis elegans Hypothetical p... 37 0.008
Z68217-9|CAC70099.2| 613|Caenorhabditis elegans Hypothetical pr... 37 0.008
Z68217-4|CAA92467.2| 499|Caenorhabditis elegans Hypothetical pr... 37 0.008
AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear recep... 37 0.008
AF332209-1|AAK17980.1| 350|Caenorhabditis elegans nuclear recep... 37 0.008
AF273780-1|AAG15129.1| 509|Caenorhabditis elegans nuclear recep... 37 0.008
AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormo... 37 0.008
AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormo... 37 0.008
U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical pr... 36 0.011
U61950-7|AAL02467.1| 395|Caenorhabditis elegans Nuclear hormone... 36 0.019
U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone... 36 0.019
U61950-5|AAL02466.1| 576|Caenorhabditis elegans Nuclear hormone... 36 0.019
AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear recep... 36 0.019
AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear recep... 36 0.019
AF273789-1|AAG15137.1| 333|Caenorhabditis elegans nuclear recep... 36 0.019
AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear recep... 36 0.019
Z70210-8|CAA94154.2| 414|Caenorhabditis elegans Hypothetical pr... 35 0.034
AY204169-1|AAO39173.1| 414|Caenorhabditis elegans nuclear recep... 35 0.034
U41559-7|AAV34794.1| 544|Caenorhabditis elegans Nuclear hormone... 34 0.059
U41559-6|AAC24263.1| 583|Caenorhabditis elegans Nuclear hormone... 34 0.059
AF273779-1|AAG15128.1| 565|Caenorhabditis elegans nuclear recep... 34 0.059
AF273778-1|AAG15127.1| 595|Caenorhabditis elegans nuclear recep... 34 0.059
AF273777-1|AAG15126.1| 421|Caenorhabditis elegans nuclear recep... 34 0.059
AF273776-1|AAG15125.1| 583|Caenorhabditis elegans nuclear recep... 34 0.059
AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormo... 33 0.078
U97003-6|AAB52273.1| 402|Caenorhabditis elegans Hypothetical pr... 32 0.24
U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone... 31 0.32
U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone... 31 0.32
U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone... 31 0.32
AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical ... 31 0.32
AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear recep... 31 0.32
AY204162-1|AAO39166.1| 112|Caenorhabditis elegans nuclear recep... 31 0.55
AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical ... 31 0.55
Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical pr... 30 0.96
AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear recep... 30 0.96
AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear recep... 30 0.96
AF083226-1|AAD03684.1| 560|Caenorhabditis elegans nuclear recep... 30 0.96
AF036702-12|AAP31437.1| 559|Caenorhabditis elegans Nuclear horm... 30 0.96
AF036702-11|AAP31436.1| 560|Caenorhabditis elegans Nuclear horm... 30 0.96
AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical ... 30 0.96
U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical pr... 29 1.3
AF016443-2|AAC24272.1| 359|Caenorhabditis elegans Hypothetical ... 29 1.3
Z81050-8|CAB02857.2| 437|Caenorhabditis elegans Hypothetical pr... 29 2.2
AF024494-13|AAB70328.1| 398|Caenorhabditis elegans Nuclear horm... 28 2.9
Z81074-1|CAB03044.2| 492|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z54270-7|CAE48496.1| 492|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical pr... 28 3.9
AY349018-1|AAQ55498.1| 310|Caenorhabditis elegans NHR-91B protein. 28 3.9
AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein. 28 3.9
AL132841-5|CAI46629.1| 310|Caenorhabditis elegans Hypothetical ... 28 3.9
AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical ... 28 3.9
AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear recep... 28 3.9
AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear recep... 28 3.9
AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear recep... 28 3.9
AF179215-1|AAF67039.1| 492|Caenorhabditis elegans NHR-25 beta p... 28 3.9
AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha ... 28 3.9
AF083223-1|AAD03681.1| 492|Caenorhabditis elegans nuclear recep... 28 3.9
Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical p... 27 5.1
U97008-3|AAB52308.1| 380|Caenorhabditis elegans Hypothetical pr... 27 5.1
U64835-7|AAG24198.2| 427|Caenorhabditis elegans Hypothetical pr... 27 5.1
U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical pr... 27 5.1
U41536-4|AAK39238.2| 419|Caenorhabditis elegans Defective fasci... 27 5.1
AF176087-1|AAD55066.1| 419|Caenorhabditis elegans nuclear hormo... 27 5.1
Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical pr... 27 9.0
Z46937-3|CAA87058.2| 457|Caenorhabditis elegans Hypothetical pr... 27 9.0
AL021479-6|CAA16320.2| 420|Caenorhabditis elegans Hypothetical ... 27 9.0
AF273771-1|AAG15120.1| 454|Caenorhabditis elegans nuclear recep... 27 9.0
>AY204174-1|AAO39178.1| 344|Caenorhabditis elegans nuclear receptor
NHR-64 protein.
Length = 344
Score = 85.0 bits (201), Expect = 2e-17
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCI 60
+ QQL ++VEWAK + F + QVALLR + +HL++ A RS+HL D + L N
Sbjct: 137 MNQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFRSIHLSDAVWLTNETC 196
Query: 61 ITKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ K D D++ + R++D++ P+R + +++ E+ LKAI FFDP A
Sbjct: 197 LHK---DSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFFDPLA 245
>AY204173-1|AAO39177.1| 369|Caenorhabditis elegans nuclear receptor
NHR-64 protein.
Length = 369
Score = 85.0 bits (201), Expect = 2e-17
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCI 60
+ QQL ++VEWAK + F + QVALLR + +HL++ A RS+HL D + L N
Sbjct: 162 MNQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFRSIHLSDAVWLTNETC 221
Query: 61 ITKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ K D D++ + R++D++ P+R + +++ E+ LKAI FFDP A
Sbjct: 222 LHK---DSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFFDPLA 270
>AY204172-1|AAO39176.1| 234|Caenorhabditis elegans nuclear receptor
NHR-64 protein.
Length = 234
Score = 85.0 bits (201), Expect = 2e-17
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCI 60
+ QQL ++VEWAK + F + QVALLR + +HL++ A RS+HL D + L N
Sbjct: 27 MNQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFRSIHLSDAVWLTNETC 86
Query: 61 ITKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ K D D++ + R++D++ P+R + +++ E+ LKAI FFDP A
Sbjct: 87 LHK---DSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFFDPLA 135
>AF043694-2|AAT27251.1| 387|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 64, isoform b protein.
Length = 387
Score = 85.0 bits (201), Expect = 2e-17
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCI 60
+ QQL ++VEWAK + F + QVALLR + +HL++ A RS+HL D + L N
Sbjct: 180 MNQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFRSIHLSDAVWLTNETC 239
Query: 61 ITKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ K D D++ + R++D++ P+R + +++ E+ LKAI FFDP A
Sbjct: 240 LHK---DSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFFDPLA 288
>AF043694-1|AAC24283.1| 412|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 64, isoform a protein.
Length = 412
Score = 85.0 bits (201), Expect = 2e-17
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 3/112 (2%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCI 60
+ QQL ++VEWAK + F + QVALLR + +HL++ A RS+HL D + L N
Sbjct: 205 MNQQLTLMVEWAKVLEGFQRVDNITQVALLRHFSAQHLVMCAAFRSIHLSDAVWLTNETC 264
Query: 61 ITKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ K D D++ + R++D++ P+R + +++ E+ LKAI FFDP A
Sbjct: 265 LHK---DSPKIPDMNRVAERIIDQVTNPMRSLHMNEIEYIALKAIAFFDPLA 313
>Z83240-1|CAB05815.2| 373|Caenorhabditis elegans Hypothetical
protein T23H4.2 protein.
Length = 373
Score = 82.6 bits (195), Expect = 1e-16
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRS--LHLKDILLLGNN 58
I QQL++ +EWAK +P F+ L DQ ALL+ A ++LG A RS L +++ + L N+
Sbjct: 149 IHQQLVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSICLTVENTICLAND 208
Query: 59 CIITKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
++ K + DI+ ++G R++DEIV P+R +++D E+ LKAI+FF+P
Sbjct: 209 TLLPKEHATQVGDIN-CVVG-RIIDEIVNPMRRLNMDLIEYVALKAILFFNP 258
>AY204178-1|AAO39182.1| 373|Caenorhabditis elegans nuclear receptor
NHR-69 protein.
Length = 373
Score = 82.6 bits (195), Expect = 1e-16
Identities = 45/112 (40%), Positives = 73/112 (65%), Gaps = 4/112 (3%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRS--LHLKDILLLGNN 58
I QQL++ +EWAK +P F+ L DQ ALL+ A ++LG A RS L +++ + L N+
Sbjct: 149 IHQQLVLFIEWAKSLPQFSFLAQADQAALLKGGAASIIVLGVAYRSICLTVENTICLAND 208
Query: 59 CIITKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
++ K + DI+ ++G R++DEIV P+R +++D E+ LKAI+FF+P
Sbjct: 209 TLLPKEHATQVGDIN-CVVG-RIIDEIVNPMRRLNMDLIEYVALKAILFFNP 258
>Z83235-7|CAD57703.1| 486|Caenorhabditis elegans Hypothetical
protein K10C3.6d protein.
Length = 486
Score = 82.2 bits (194), Expect = 2e-16
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKH 64
LL++VEWAK I F +L ++D++ LL+ +A +HL+L A RS + L N + +
Sbjct: 217 LLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTRVCLFNNTYMTRDN 276
Query: 65 NID--GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
N D G S I RV+DEIV P+R++ + + EF CLKA+ F P A
Sbjct: 277 NTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQEFVCLKALAFLHPEA 326
>Z83235-6|CAD57702.1| 501|Caenorhabditis elegans Hypothetical
protein K10C3.6c protein.
Length = 501
Score = 82.2 bits (194), Expect = 2e-16
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKH 64
LL++VEWAK I F +L ++D++ LL+ +A +HL+L A RS + L N + +
Sbjct: 232 LLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTRVCLFNNTYMTRDN 291
Query: 65 NID--GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
N D G S I RV+DEIV P+R++ + + EF CLKA+ F P A
Sbjct: 292 NTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQEFVCLKALAFLHPEA 341
>Z83235-5|CAD21653.1| 476|Caenorhabditis elegans Hypothetical
protein K10C3.6b protein.
Length = 476
Score = 82.2 bits (194), Expect = 2e-16
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKH 64
LL++VEWAK I F +L ++D++ LL+ +A +HL+L A RS + L N + +
Sbjct: 207 LLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTRVCLFNNTYMTRDN 266
Query: 65 NID--GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
N D G S I RV+DEIV P+R++ + + EF CLKA+ F P A
Sbjct: 267 NTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQEFVCLKALAFLHPEA 316
>Z83235-4|CAB05772.1| 477|Caenorhabditis elegans Hypothetical
protein K10C3.6a protein.
Length = 477
Score = 82.2 bits (194), Expect = 2e-16
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKH 64
LL++VEWAK I F +L ++D++ LL+ +A +HL+L A RS + L N + +
Sbjct: 208 LLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTRVCLFNNTYMTRDN 267
Query: 65 NID--GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
N D G S I RV+DEIV P+R++ + + EF CLKA+ F P A
Sbjct: 268 NTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQEFVCLKALAFLHPEA 317
>AF332206-1|AAK17977.1| 381|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 381
Score = 82.2 bits (194), Expect = 2e-16
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKH 64
LL++VEWAK I F +L ++D++ LL+ +A +HL+L A RS + L N + +
Sbjct: 202 LLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTRVCLFNNTYMTRDN 261
Query: 65 NID--GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
N D G S I RV+DEIV P+R++ + + EF CLKA+ F P A
Sbjct: 262 NTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQEFVCLKALAFLHPEA 311
>AF273795-1|AAG15143.1| 475|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 475
Score = 82.2 bits (194), Expect = 2e-16
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKH 64
LL++VEWAK I F +L ++D++ LL+ +A +HL+L A RS + L N + +
Sbjct: 206 LLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTRVCLFNNTYMTRDN 265
Query: 65 NID--GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
N D G S I RV+DEIV P+R++ + + EF CLKA+ F P A
Sbjct: 266 NTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQEFVCLKALAFLHPEA 315
>AF273793-1|AAG15141.1| 474|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 474
Score = 82.2 bits (194), Expect = 2e-16
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKH 64
LL++VEWAK I F +L ++D++ LL+ +A +HL+L A RS + L N + +
Sbjct: 205 LLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTRVCLFNNTYMTRDN 264
Query: 65 NID--GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
N D G S I RV+DEIV P+R++ + + EF CLKA+ F P A
Sbjct: 265 NTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQEFVCLKALAFLHPEA 314
>AF273792-1|AAG15140.1| 337|Caenorhabditis elegans nuclear receptor
NHR-49 protein.
Length = 337
Score = 82.2 bits (194), Expect = 2e-16
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 2/110 (1%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKH 64
LL++VEWAK I F +L ++D++ LL+ +A +HL+L A RS + L N + +
Sbjct: 68 LLLMVEWAKTINPFMDLSMEDKIILLKNYAPQHLILMPAFRSPDTTRVCLFNNTYMTRDN 127
Query: 65 NID--GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
N D G S I RV+DEIV P+R++ + + EF CLKA+ F P A
Sbjct: 128 NTDLNGFAAFKTSNITPRVLDEIVWPMRQLQMREQEFVCLKALAFLHPEA 177
>U41542-10|AAX88836.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 35, isoform b protein.
Length = 486
Score = 74.1 bits (174), Expect = 5e-14
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 4 QLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCII-- 61
QLL+++EWAK +P F +L DQ LL+ AG+H+ L A RS+ D L L N+ I
Sbjct: 188 QLLLVIEWAKTLPEFKQLSGADQAVLLKNFAGQHVTLCVAYRSVGANDALKLLNDLYIPR 247
Query: 62 ---TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
T ++ +D +VMD++V+P+R + +D+ EF LKA V F+P A
Sbjct: 248 ASKTTPHLKEYVDGFYLRDCEKVMDQLVEPMRFLKLDNKEFVALKACVLFNPVA 301
>U41542-9|AAK39150.3| 542|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 35, isoform a protein.
Length = 542
Score = 74.1 bits (174), Expect = 5e-14
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 4 QLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCII-- 61
QLL+++EWAK +P F +L DQ LL+ AG+H+ L A RS+ D L L N+ I
Sbjct: 244 QLLLVIEWAKTLPEFKQLSGADQAVLLKNFAGQHVTLCVAYRSVGANDALKLLNDLYIPR 303
Query: 62 ---TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
T ++ +D +VMD++V+P+R + +D+ EF LKA V F+P A
Sbjct: 304 ASKTTPHLKEYVDGFYLRDCEKVMDQLVEPMRFLKLDNKEFVALKACVLFNPVA 357
>AY305836-1|AAR11981.1| 487|Caenorhabditis elegans nuclear receptor
NHR-35 protein.
Length = 487
Score = 74.1 bits (174), Expect = 5e-14
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 4 QLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCII-- 61
QLL+++EWAK +P F +L DQ LL+ AG+H+ L A RS+ D L L N+ I
Sbjct: 189 QLLLVIEWAKTLPEFKQLSGADQAVLLKNFAGQHVTLCVAYRSVGANDALKLLNDLYIPR 248
Query: 62 ---TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
T ++ +D +VMD++V+P+R + +D+ EF LKA V F+P A
Sbjct: 249 ASKTTPHLKEYVDGFYLRDCEKVMDQLVEPMRFLKLDNKEFVALKACVLFNPVA 302
>AF273781-1|AAG15130.1| 508|Caenorhabditis elegans nuclear receptor
NHR-35 protein.
Length = 508
Score = 74.1 bits (174), Expect = 5e-14
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 5/114 (4%)
Query: 4 QLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCII-- 61
QLL+++EWAK +P F +L DQ LL+ AG+H+ L A RS+ D L L N+ I
Sbjct: 210 QLLLVIEWAKTLPEFKQLSGADQAVLLKNFAGQHVTLCVAYRSVGANDALKLLNDLYIPR 269
Query: 62 ---TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
T ++ +D +VMD++V+P+R + +D+ EF LKA V F+P A
Sbjct: 270 ASKTTPHLKEYVDGFYLRDCEKVMDQLVEPMRFLKLDNKEFVALKACVLFNPVA 323
>U10438-5|AAA19086.1| 395|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 10 protein.
Length = 395
Score = 56.0 bits (129), Expect = 1e-08
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 7 ILVEWAKYIPAFTELHLDDQVALLRAHAGEH-LLLGCARRSLHLKDILLLGNNCIITKHN 65
+++EWAK +P F L D++ALLR A + L+ H D ++ + +
Sbjct: 205 VMIEWAKTLPVFQSLPFTDKLALLRHSAITYPSLVHVFNSPDHGLDTIVFPDGAYFDRTP 264
Query: 66 IDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
R + + +++D+++KP+R ++ID TEFA KAI F +P A
Sbjct: 265 EPTR-PLGFNKKKYQMLDQLLKPMRSMEIDMTEFAAFKAIFFLNPDA 310
>AY204168-1|AAO39172.1| 395|Caenorhabditis elegans nuclear receptor
NHR-10 protein.
Length = 395
Score = 55.6 bits (128), Expect = 2e-08
Identities = 33/107 (30%), Positives = 57/107 (53%), Gaps = 2/107 (1%)
Query: 7 ILVEWAKYIPAFTELHLDDQVALLRAHAGEH-LLLGCARRSLHLKDILLLGNNCIITKHN 65
+++EWAK +P F L D++ALLR A + L+ H D ++ + +
Sbjct: 205 VMIEWAKTLPVFQSLPFTDKLALLRHSAITYPSLVHVFNPPDHGLDTIVFPDGAYFDRTP 264
Query: 66 IDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
R + + +++D+++KP+R ++ID TEFA KAI F +P A
Sbjct: 265 EPTR-PLGFNKKKYQMLDQLLKPMRSMEIDMTEFAAFKAIFFLNPDA 310
>U97551-2|AAP13776.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 14, isoform b protein.
Length = 434
Score = 54.4 bits (125), Expect = 4e-08
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 8 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKHNID 67
L+ W + E+ L D+V LL+ + LLG +RS+ L +L + + +I
Sbjct: 173 LIGWTNMLHPLPEVPLADKVLLLKKFSSAFTLLGTLQRSMALPHFVLPNDQVL----SIS 228
Query: 68 GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
++ R++DE++ PLR + D EF+CLKA++ +P
Sbjct: 229 ASHPPELFEALTRIIDELLTPLRRLRTDHAEFSCLKALLLLNP 271
>U97551-1|AAP13775.1| 435|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 14, isoform a protein.
Length = 435
Score = 54.4 bits (125), Expect = 4e-08
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 8 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKHNID 67
L+ W + E+ L D+V LL+ + LLG +RS+ L +L + + +I
Sbjct: 173 LIGWTNMLHPLPEVPLADKVLLLKKFSSAFTLLGTLQRSMALPHFVLPNDQVL----SIS 228
Query: 68 GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
++ R++DE++ PLR + D EF+CLKA++ +P
Sbjct: 229 ASHPPELFEALTRIIDELLTPLRRLRTDHAEFSCLKALLLLNP 271
>AF083229-1|AAD03687.1| 288|Caenorhabditis elegans nuclear receptor
NHR-14 protein.
Length = 288
Score = 54.4 bits (125), Expect = 4e-08
Identities = 30/103 (29%), Positives = 53/103 (51%), Gaps = 4/103 (3%)
Query: 8 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKHNID 67
L+ W + E+ L D+V LL+ + LLG +RS+ L +L + + +I
Sbjct: 26 LIGWTNMLHPLPEVPLADKVLLLKKFSSAFTLLGTLQRSMALPHFVLPNDQVL----SIS 81
Query: 68 GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
++ R++DE++ PLR + D EF+CLKA++ +P
Sbjct: 82 ASHPPELFEALTRIIDELLTPLRRLRTDHAEFSCLKALLLLNP 124
>U46670-2|AAC48174.4| 440|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 1, isoform c protein.
Length = 440
Score = 53.6 bits (123), Expect = 7e-08
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSL-HLKDILLLGNNCII 61
+++ I +EWAK + L+L DQ AL+R A LL S H D ++ N I
Sbjct: 247 REMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFI 306
Query: 62 TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ I R MDEI+ P R++ + EFA KA +FF+P A
Sbjct: 307 MRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFNPDA 357
>U46670-1|AAP46277.1| 445|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 1, isoform a protein.
Length = 445
Score = 53.6 bits (123), Expect = 7e-08
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSL-HLKDILLLGNNCII 61
+++ I +EWAK + L+L DQ AL+R A LL S H D ++ N I
Sbjct: 252 REMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFI 311
Query: 62 TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ I R MDEI+ P R++ + EFA KA +FF+P A
Sbjct: 312 MRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFNPDA 362
>AY204166-1|AAO39170.1| 436|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 436
Score = 53.6 bits (123), Expect = 7e-08
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSL-HLKDILLLGNNCII 61
+++ I +EWAK + L+L DQ AL+R A LL S H D ++ N I
Sbjct: 243 REMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFI 302
Query: 62 TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ I R MDEI+ P R++ + EFA KA +FF+P A
Sbjct: 303 MRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFNPDA 353
>AY204165-1|AAO39169.1| 445|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 445
Score = 53.6 bits (123), Expect = 7e-08
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSL-HLKDILLLGNNCII 61
+++ I +EWAK + L+L DQ AL+R A LL S H D ++ N I
Sbjct: 252 REMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFI 311
Query: 62 TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ I R MDEI+ P R++ + EFA KA +FF+P A
Sbjct: 312 MRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFNPDA 362
>AY204164-1|AAO39168.1| 440|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 440
Score = 53.6 bits (123), Expect = 7e-08
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSL-HLKDILLLGNNCII 61
+++ I +EWAK + L+L DQ AL+R A LL S H D ++ N I
Sbjct: 247 REMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFI 306
Query: 62 TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ I R MDEI+ P R++ + EFA KA +FF+P A
Sbjct: 307 MRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFNPDA 357
>AY204163-1|AAO39167.1| 440|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 440
Score = 53.6 bits (123), Expect = 7e-08
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 1/111 (0%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSL-HLKDILLLGNNCII 61
+++ I +EWAK + L+L DQ AL+R A LL S H D ++ N I
Sbjct: 247 REMRICIEWAKTFDVYQRLNLFDQFALVRNFAFAFNLLNRVFYSPDHGPDKIVFQNGAFI 306
Query: 62 TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+ I R MDEI+ P R++ + EFA KA +FF+P A
Sbjct: 307 MRQPQQQVQLSGCRPIYTRQMDEIMIPFRKLQLSVAEFATFKAALFFNPDA 357
>Z83235-10|CAB05776.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/112 (18%), Positives = 52/112 (46%)
Query: 2 KQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCII 61
K+ ++ +W + +P + ++ ++DQ+ L + G CA ++ + +N
Sbjct: 300 KRNFVLFSDWLRALPEYNQMSIEDQIVLAKNRYGTFHWWMCANWTVQAGCEGVCYSNGAY 359
Query: 62 TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRAT 113
+ + D+ R+ D + P++E+++D+TE + A++ F T
Sbjct: 360 FPKQPEAQCIPDVKGSSGRMYDSLSIPIKELNLDETEIVLMLAVIIFSDEIT 411
>AL032645-2|CAA21675.2| 515|Caenorhabditis elegans Hypothetical
protein Y67A6A.2 protein.
Length = 515
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/112 (18%), Positives = 52/112 (46%)
Query: 2 KQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCII 61
K+ ++ +W + +P + ++ ++DQ+ L + G CA ++ + +N
Sbjct: 300 KRNFVLFSDWLRALPEYNQMSIEDQIVLAKNRYGTFHWWMCANWTVQAGCEGVCYSNGAY 359
Query: 62 TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRAT 113
+ + D+ R+ D + P++E+++D+TE + A++ F T
Sbjct: 360 FPKQPEAQCIPDVKGSSGRMYDSLSIPIKELNLDETEIVLMLAVIIFSDEIT 411
>AF273814-1|AAG15163.1| 489|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 489
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/112 (18%), Positives = 52/112 (46%)
Query: 2 KQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCII 61
K+ ++ +W + +P + ++ ++DQ+ L + G CA ++ + +N
Sbjct: 274 KRNFVLFSDWLRALPEYNQMSIEDQIVLAKNRYGTFHWWMCANWTVQAGCEGVCYSNGAY 333
Query: 62 TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRAT 113
+ + D+ R+ D + P++E+++D+TE + A++ F T
Sbjct: 334 FPKQPEAQCIPDVKGSSGRMYDSLSIPIKELNLDETEIVLMLAVIIFSDEIT 385
>AF273813-1|AAG15162.1| 454|Caenorhabditis elegans nuclear receptor
NHR-62 protein.
Length = 454
Score = 44.0 bits (99), Expect = 6e-05
Identities = 21/112 (18%), Positives = 52/112 (46%)
Query: 2 KQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCII 61
K+ ++ +W + +P + ++ ++DQ+ L + G CA ++ + +N
Sbjct: 239 KRNFVLFSDWLRALPEYNQMSIEDQIVLAKNRYGTFHWWMCANWTVQAGCEGVCYSNGAY 298
Query: 62 TKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRAT 113
+ + D+ R+ D + P++E+++D+TE + A++ F T
Sbjct: 299 FPKQPEAQCIPDVKGSSGRMYDSLSIPIKELNLDETEIVLMLAVIIFSDEIT 350
>AY204185-1|AAO39189.1| 400|Caenorhabditis elegans nuclear receptor
NHR-101 protein.
Length = 400
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 7 ILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSL-HLKDILLLGNNCIITKHN 65
+L E+AK F L +Q L+R A L S H D ++ + + +
Sbjct: 209 VLTEYAKTFKIFEALSYAEQAELVRHSAITLPALNQVYNSPDHGLDTVVFPDGTYYDRTH 268
Query: 66 IDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
R ++ +V+D ++KP REIDI+ EFA KAI F +P A
Sbjct: 269 EPTRPS-GLNRKKYQVLDLVLKPFREIDINFNEFAAFKAITFLNPDA 314
>AL022272-4|CAC42310.2| 391|Caenorhabditis elegans Hypothetical
protein H12C20.6a protein.
Length = 391
Score = 42.3 bits (95), Expect = 2e-04
Identities = 33/107 (30%), Positives = 50/107 (46%), Gaps = 2/107 (1%)
Query: 7 ILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSL-HLKDILLLGNNCIITKHN 65
+L E+AK F L D+ L+R A L S H D ++ + + +
Sbjct: 200 VLTEYAKTFKIFEALSYADKAELVRHSAITLPALNQVYNSPDHGLDTVVFPDGTYYDRTH 259
Query: 66 IDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
R ++ +V+D ++KP REIDI+ EFA KAI F +P A
Sbjct: 260 EPTRPS-GLNRKKYQVLDLVLKPFREIDINFNEFAAFKAITFLNPDA 305
>Z50004-1|CAA90291.1| 396|Caenorhabditis elegans Hypothetical
protein C02B4.2 protein.
Length = 396
Score = 41.5 bits (93), Expect = 3e-04
Identities = 32/114 (28%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLH-LKDIL-----LLGNN 58
L +LVEWAK F+ L +DQ L A +L+L A + D + L G
Sbjct: 192 LTVLVEWAKSFEVFSHLIPEDQKRLFIHTAFSNLVLAEAFHTPEKYNDRIVFPDGLCGFR 251
Query: 59 CIITKHNIDG--RMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
+ + DG ++ + V+++++ P+R + + E+ L+AI+FFDP
Sbjct: 252 NVAQSVSTDGVSNKTFGLTPTVVAVINDVLVPIRRMRLTKVEYVLLQAIIFFDP 305
>AF273830-1|AAG15179.1| 598|Caenorhabditis elegans nuclear receptor
NHR-88 protein.
Length = 598
Score = 40.7 bits (91), Expect = 5e-04
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 1 IKQQLLILVEWAKYI---PAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGN 57
+++ +L V W + TE+H D+ LL++ G + A R+ + D L+
Sbjct: 229 LRRYVLSAVHWIDALFNLAHLTEIH--DKTTLLKSVIGPFTIFNIAARTAQISDGDLI-- 284
Query: 58 NCIITKHNID---GRMDIDISMIGM----RVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
C+ K I+ R +D +++G RV+D++V P +++ + + E L A++ DP
Sbjct: 285 -CLCNKSTINRQPARHLLDTNLVGNNFVGRVIDDLVFPTKKLALTNPEITILSALIILDP 343
Query: 111 RA 112
A
Sbjct: 344 DA 345
>AC006671-1|AAF39914.2| 593|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 88, isoform a protein.
Length = 593
Score = 40.7 bits (91), Expect = 5e-04
Identities = 31/122 (25%), Positives = 60/122 (49%), Gaps = 15/122 (12%)
Query: 1 IKQQLLILVEWAKYI---PAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGN 57
+++ +L V W + TE+H D+ LL++ G + A R+ + D L+
Sbjct: 224 LRRYVLSAVHWIDALFNLAHLTEIH--DKTTLLKSVIGPFTIFNIAARTAQISDGDLI-- 279
Query: 58 NCIITKHNID---GRMDIDISMIGM----RVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
C+ K I+ R +D +++G RV+D++V P +++ + + E L A++ DP
Sbjct: 280 -CLCNKSTINRQPARHLLDTNLVGNNFVGRVIDDLVFPTKKLALTNPEITILSALIILDP 338
Query: 111 RA 112
A
Sbjct: 339 DA 340
>U41296-1|AAA93297.1| 579|Caenorhabditis elegans Steroid hormone
receptor-like proteinprotein.
Length = 579
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 81 VMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
++D ++KP R+++ TEFA L+AI+FFDP
Sbjct: 440 MIDLVMKPFRQLNFSTTEFALLQAIMFFDP 469
Score = 30.3 bits (65), Expect = 0.73
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 2 KQQLLIL-VEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCA-RRSLHLK 50
+Q+L+ L ++WAK F L D+VA++ HA +++ A R H+K
Sbjct: 207 RQRLIALYIDWAKTFSTFRSLPYADKVAMVTNHASSFMIMCEAFRTPEHMK 257
>AY204170-1|AAO39174.1| 579|Caenorhabditis elegans nuclear receptor
NHR-47 protein.
Length = 579
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 81 VMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
++D ++KP R+++ TEFA L+AI+FFDP
Sbjct: 440 MIDLVMKPFRQLNFSTTEFALLQAIMFFDP 469
Score = 30.3 bits (65), Expect = 0.73
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 2 KQQLLIL-VEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCA-RRSLHLK 50
+Q+L+ L ++WAK F L D+VA++ HA +++ A R H+K
Sbjct: 207 RQRLIALYIDWAKTFSTFRSLPYADKVAMVTNHASSFMIMCEAFRTPEHMK 257
>AF067936-1|AAC19212.2| 579|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 47 protein.
Length = 579
Score = 39.5 bits (88), Expect = 0.001
Identities = 15/30 (50%), Positives = 24/30 (80%)
Query: 81 VMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
++D ++KP R+++ TEFA L+AI+FFDP
Sbjct: 440 MIDLVMKPFRQLNFSTTEFALLQAIMFFDP 469
Score = 30.3 bits (65), Expect = 0.73
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%)
Query: 2 KQQLLIL-VEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCA-RRSLHLK 50
+Q+L+ L ++WAK F L D+VA++ HA +++ A R H+K
Sbjct: 207 RQRLIALYIDWAKTFSTFRSLPYADKVAMVTNHASSFMIMCEAFRTPEHMK 257
>AC006674-1|AAK68390.1| 388|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 119 protein.
Length = 388
Score = 39.5 bits (88), Expect = 0.001
Identities = 24/114 (21%), Positives = 60/114 (52%), Gaps = 13/114 (11%)
Query: 3 QQLLILVEWAKYIPAFTELH-LDDQVALLRAHAGEHLLLG-CARRSLHLKDILLLGNNCI 60
++L+ +++WA ++ +++ +DD++A+++A G ++ CA S H + N
Sbjct: 223 RRLIAMIDWADHLFDMMDVNNMDDKIAIVKASYGPLMIFSLCANTSRHK----IYAPNGW 278
Query: 61 ITKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRATT 114
++ ++ R +DE++ PL+++++ + E +KAI+ +P T
Sbjct: 279 AEPYHFGNQL-------AERCIDELIDPLKKMNLKEEEITLIKAIIVLNPYLKT 325
>AF408754-1|AAO27833.1| 418|Caenorhabditis elegans nuclear receptor
protein protein.
Length = 418
Score = 38.7 bits (86), Expect = 0.002
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+++D ++KP R++ +D TEFA KA+ F +P A
Sbjct: 296 QMLDLVLKPFRDLQLDATEFAAFKAVTFLNPDA 328
>AC084155-10|AAG23368.3| 418|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 114, isoform a protein.
Length = 418
Score = 38.7 bits (86), Expect = 0.002
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+++D ++KP R++ +D TEFA KA+ F +P A
Sbjct: 296 QMLDLVLKPFRDLQLDATEFAAFKAVTFLNPDA 328
>Z47356-8|CAD27185.1| 477|Caenorhabditis elegans Hypothetical
protein E02H1.7 protein.
Length = 477
Score = 38.3 bits (85), Expect = 0.003
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 2 KQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL--GCARRSLHLKDILLLGNNC 59
+ +LL+++EW + +P F L + D+ +L+ A L+L G ++ D+ L+ N
Sbjct: 266 QSELLMMLEWTRTLPVFASLPVQDRSVILKRFAVHCLILEHGYYTAQANIDDVWLITNGT 325
Query: 60 IITKH--NIDGRMDIDIS------------MIGMRVMDEIVKPLREIDIDDTEFACLKAI 105
+ ++ ++ I +S + +DE+ PLR + + E +K I
Sbjct: 326 CMPRNVEKLEEGCKISVSADRRWRQEKLYKQMTDCCIDEVATPLRNLKLSPQEIVVIKII 385
Query: 106 VFFD 109
V F+
Sbjct: 386 VLFN 389
>Z47075-8|CAA87381.2| 477|Caenorhabditis elegans Hypothetical
protein E02H1.7 protein.
Length = 477
Score = 38.3 bits (85), Expect = 0.003
Identities = 28/124 (22%), Positives = 57/124 (45%), Gaps = 16/124 (12%)
Query: 2 KQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL--GCARRSLHLKDILLLGNNC 59
+ +LL+++EW + +P F L + D+ +L+ A L+L G ++ D+ L+ N
Sbjct: 266 QSELLMMLEWTRTLPVFASLPVQDRSVILKRFAVHCLILEHGYYTAQANIDDVWLITNGT 325
Query: 60 IITKH--NIDGRMDIDIS------------MIGMRVMDEIVKPLREIDIDDTEFACLKAI 105
+ ++ ++ I +S + +DE+ PLR + + E +K I
Sbjct: 326 CMPRNVEKLEEGCKISVSADRRWRQEKLYKQMTDCCIDEVATPLRNLKLSPQEIVVIKII 385
Query: 106 VFFD 109
V F+
Sbjct: 386 VLFN 389
>AY204177-1|AAO39181.1| 385|Caenorhabditis elegans nuclear receptor
NHR-68 protein.
Length = 385
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+V+D ++KP RE++I+ EFA KAI F +P A
Sbjct: 271 QVLDLVLKPFREMEINFNEFAAFKAITFLNPDA 303
>AL022272-2|CAA18351.1| 385|Caenorhabditis elegans Hypothetical
protein H12C20.3 protein.
Length = 385
Score = 38.3 bits (85), Expect = 0.003
Identities = 16/33 (48%), Positives = 24/33 (72%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+V+D ++KP RE++I+ EFA KAI F +P A
Sbjct: 271 QVLDLVLKPFREMEINFNEFAAFKAITFLNPDA 303
>AY204202-1|AAO39203.1| 339|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 339
Score = 37.9 bits (84), Expect = 0.004
Identities = 13/31 (41%), Positives = 23/31 (74%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
+++D ++KP R++ +D TEFA KA+ F +P
Sbjct: 296 QMLDLVLKPFRDLQLDATEFAAFKAVTFLNP 326
>AY204201-1|AAO39202.1| 409|Caenorhabditis elegans nuclear receptor
NHR-114 protein.
Length = 409
Score = 37.9 bits (84), Expect = 0.004
Identities = 14/33 (42%), Positives = 24/33 (72%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
+++D ++KP R++ +D TEFA KA+ F +P A
Sbjct: 287 QMLDLVLKPFRDLRLDATEFAAFKAVTFLNPDA 319
>Z68222-9|CAE46689.1| 631|Caenorhabditis elegans Hypothetical
protein F58G6.5c protein.
Length = 631
Score = 36.7 bits (81), Expect = 0.008
Identities = 13/33 (39%), Positives = 25/33 (75%)
Query: 76 MIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
++ +M+++V P+RE+D+D+ EF LKA++ F
Sbjct: 461 ILSEHLMEDLVIPMREMDMDEGEFVILKALILF 493
>Z68222-8|CAC70146.2| 613|Caenorhabditis elegans Hypothetical
protein F58G6.5b protein.
Length = 613
Score = 36.7 bits (81), Expect = 0.008
Identities = 13/33 (39%), Positives = 25/33 (75%)
Query: 76 MIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
++ +M+++V P+RE+D+D+ EF LKA++ F
Sbjct: 443 ILSEHLMEDLVIPMREMDMDEGEFVILKALILF 475
>Z68217-10|CAE46673.1| 631|Caenorhabditis elegans Hypothetical
protein F58G6.5c protein.
Length = 631
Score = 36.7 bits (81), Expect = 0.008
Identities = 13/33 (39%), Positives = 25/33 (75%)
Query: 76 MIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
++ +M+++V P+RE+D+D+ EF LKA++ F
Sbjct: 461 ILSEHLMEDLVIPMREMDMDEGEFVILKALILF 493
>Z68217-9|CAC70099.2| 613|Caenorhabditis elegans Hypothetical
protein F58G6.5b protein.
Length = 613
Score = 36.7 bits (81), Expect = 0.008
Identities = 13/33 (39%), Positives = 25/33 (75%)
Query: 76 MIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
++ +M+++V P+RE+D+D+ EF LKA++ F
Sbjct: 443 ILSEHLMEDLVIPMREMDMDEGEFVILKALILF 475
>Z68217-4|CAA92467.2| 499|Caenorhabditis elegans Hypothetical
protein F58G6.5a protein.
Length = 499
Score = 36.7 bits (81), Expect = 0.008
Identities = 13/33 (39%), Positives = 25/33 (75%)
Query: 76 MIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
++ +M+++V P+RE+D+D+ EF LKA++ F
Sbjct: 329 ILSEHLMEDLVIPMREMDMDEGEFVILKALILF 361
>AY204179-1|AAO39183.1| 486|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.008
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHL--KDILLLGNN 58
IK ++++ EW + P EL D+++LLR H LL + S + D L++ N
Sbjct: 242 IKTHIMLVYEWLQTWPELQELDDFDRMSLLRKAVLIHFLLDPSFLSYQIGEPDKLIMQNG 301
Query: 59 CIIT---KHNIDGRMDIDIS---------MIGMRVMDEIVKPLREIDIDDTEFACLKAIV 106
I+ H + + DIS I ++ DEI+ + + I EF LKA+
Sbjct: 302 GFISTADHHGVGWEDETDISGENKRKYYVPIMKQITDEIMPAMEAMKITFEEFVALKALA 361
Query: 107 FF 108
F
Sbjct: 362 CF 363
>AF332209-1|AAK17980.1| 350|Caenorhabditis elegans nuclear receptor
NHR-80 protein.
Length = 350
Score = 36.7 bits (81), Expect = 0.008
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHL--KDILLLGNN 58
IK ++++ EW + P EL D+++LLR H LL + S + D L++ N
Sbjct: 106 IKTHIMLVYEWLQTWPELQELDDFDRMSLLRKAVLIHFLLDPSFLSYQIGEPDKLIMQNG 165
Query: 59 CIIT---KHNIDGRMDIDIS---------MIGMRVMDEIVKPLREIDIDDTEFACLKAIV 106
I+ H + + DIS I ++ DEI+ + + I EF LKA+
Sbjct: 166 GFISTADHHGVGWEDETDISGENKRKYYVPIMKQITDEIMPAMEAMKITFEEFVALKALA 225
Query: 107 FF 108
F
Sbjct: 226 CF 227
>AF273780-1|AAG15129.1| 509|Caenorhabditis elegans nuclear receptor
NHR-34 protein.
Length = 509
Score = 36.7 bits (81), Expect = 0.008
Identities = 13/33 (39%), Positives = 25/33 (75%)
Query: 76 MIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
++ +M+++V P+RE+D+D+ EF LKA++ F
Sbjct: 339 ILSEHLMEDLVIPMREMDMDEGEFVILKALILF 371
>AF078783-3|AAN63404.1| 504|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform b protein.
Length = 504
Score = 36.7 bits (81), Expect = 0.008
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHL--KDILLLGNN 58
IK ++++ EW + P EL D+++LLR H LL + S + D L++ N
Sbjct: 260 IKTHIMLVYEWLQTWPELQELDDFDRMSLLRKAVLIHFLLDPSFLSYQIGEPDKLIMQNG 319
Query: 59 CIIT---KHNIDGRMDIDIS---------MIGMRVMDEIVKPLREIDIDDTEFACLKAIV 106
I+ H + + DIS I ++ DEI+ + + I EF LKA+
Sbjct: 320 GFISTADHHGVGWEDETDISGENKRKYYVPIMKQITDEIMPAMEAMKITFEEFVALKALA 379
Query: 107 FF 108
F
Sbjct: 380 CF 381
>AF078783-2|AAK82901.1| 486|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 80, isoform a protein.
Length = 486
Score = 36.7 bits (81), Expect = 0.008
Identities = 34/122 (27%), Positives = 55/122 (45%), Gaps = 14/122 (11%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHL--KDILLLGNN 58
IK ++++ EW + P EL D+++LLR H LL + S + D L++ N
Sbjct: 242 IKTHIMLVYEWLQTWPELQELDDFDRMSLLRKAVLIHFLLDPSFLSYQIGEPDKLIMQNG 301
Query: 59 CIIT---KHNIDGRMDIDIS---------MIGMRVMDEIVKPLREIDIDDTEFACLKAIV 106
I+ H + + DIS I ++ DEI+ + + I EF LKA+
Sbjct: 302 GFISTADHHGVGWEDETDISGENKRKYYVPIMKQITDEIMPAMEAMKITFEEFVALKALA 361
Query: 107 FF 108
F
Sbjct: 362 CF 363
>U50308-8|AAG24032.1| 562|Caenorhabditis elegans Hypothetical
protein F07C3.10 protein.
Length = 562
Score = 36.3 bits (80), Expect = 0.011
Identities = 30/109 (27%), Positives = 50/109 (45%), Gaps = 1/109 (0%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKH 64
+L +E+AK P F +L +D++ L +A +L L S K +L + I
Sbjct: 244 MLTAIEYAKTFPFFQQLESNDKILLTKATTFMNLALTSNYSSFLSKMAVLQMPDGICISG 303
Query: 65 NIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRAT 113
+ G+ + +I R+ I+ PL D TE+ LKAI+ + T
Sbjct: 304 PV-GQGEHEIRSFERRLSLRIMAPLIRNLFDRTEYVLLKAIILCNHAVT 351
>U61950-7|AAL02467.1| 395|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform c protein.
Length = 395
Score = 35.5 bits (78), Expect = 0.019
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILL---LGNNC 59
+ + +WA IP F L L DQ L + + + A + LK L LGN
Sbjct: 191 RSFVFAADWAMGIPEFRVLPLADQTTLFKQNFMAFGWITFAYKCFELKQHLTGMPLGNGA 250
Query: 60 IITKHNID-----GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
I ++ D R ++ +++D IVK + E+ I + E+ +K I F
Sbjct: 251 YIPYNDEDQKKLPERWAQTYGVVCRKLIDLIVKAMIELQITEEEYCLIKTISLF 304
>U61950-6|AAC24291.1| 528|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform a protein.
Length = 528
Score = 35.5 bits (78), Expect = 0.019
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILL---LGNNC 59
+ + +WA IP F L L DQ L + + + A + LK L LGN
Sbjct: 324 RSFVFAADWAMGIPEFRVLPLADQTTLFKQNFMAFGWITFAYKCFELKQHLTGMPLGNGA 383
Query: 60 IITKHNID-----GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
I ++ D R ++ +++D IVK + E+ I + E+ +K I F
Sbjct: 384 YIPYNDEDQKKLPERWAQTYGVVCRKLIDLIVKAMIELQITEEEYCLIKTISLF 437
>U61950-5|AAL02466.1| 576|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 46, isoform b protein.
Length = 576
Score = 35.5 bits (78), Expect = 0.019
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILL---LGNNC 59
+ + +WA IP F L L DQ L + + + A + LK L LGN
Sbjct: 372 RSFVFAADWAMGIPEFRVLPLADQTTLFKQNFMAFGWITFAYKCFELKQHLTGMPLGNGA 431
Query: 60 IITKHNID-----GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
I ++ D R ++ +++D IVK + E+ I + E+ +K I F
Sbjct: 432 YIPYNDEDQKKLPERWAQTYGVVCRKLIDLIVKAMIELQITEEEYCLIKTISLF 485
>AF273791-1|AAG15139.1| 525|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 525
Score = 35.5 bits (78), Expect = 0.019
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILL---LGNNC 59
+ + +WA IP F L L DQ L + + + A + LK L LGN
Sbjct: 321 RSFVFAADWAMGIPEFRVLPLADQTTLFKQNFMAFGWITFAYKCFELKQHLTGMPLGNGA 380
Query: 60 IITKHNID-----GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
I ++ D R ++ +++D IVK + E+ I + E+ +K I F
Sbjct: 381 YIPYNDEDQKKLPERWAQTYGVVCRKLIDLIVKAMIELQITEEEYCLIKTISLF 434
>AF273790-1|AAG15138.1| 534|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 534
Score = 35.5 bits (78), Expect = 0.019
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILL---LGNNC 59
+ + +WA IP F L L DQ L + + + A + LK L LGN
Sbjct: 330 RSFVFAADWAMGIPEFRVLPLADQTTLFKQNFMAFGWITFAYKCFELKQHLTGMPLGNGA 389
Query: 60 IITKHNID-----GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
I ++ D R ++ +++D IVK + E+ I + E+ +K I F
Sbjct: 390 YIPYNDEDQKKLPERWAQTYGVVCRKLIDLIVKAMIELQITEEEYCLIKTISLF 443
>AF273789-1|AAG15137.1| 333|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 333
Score = 35.5 bits (78), Expect = 0.019
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILL---LGNNC 59
+ + +WA IP F L L DQ L + + + A + LK L LGN
Sbjct: 129 RSFVFAADWAMGIPEFRVLPLADQTTLFKQNFMAFGWITFAYKCFELKQHLTGMPLGNGA 188
Query: 60 IITKHNID-----GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
I ++ D R ++ +++D IVK + E+ I + E+ +K I F
Sbjct: 189 YIPYNDEDQKKLPERWAQTYGVVCRKLIDLIVKAMIELQITEEEYCLIKTISLF 242
>AF273787-1|AAG15135.1| 527|Caenorhabditis elegans nuclear receptor
NHR-46 protein.
Length = 527
Score = 35.5 bits (78), Expect = 0.019
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 8/114 (7%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILL---LGNNC 59
+ + +WA IP F L L DQ L + + + A + LK L LGN
Sbjct: 323 RSFVFAADWAMGIPEFRVLPLADQTTLFKQNFMAFGWITFAYKCFELKQHLTGMPLGNGA 382
Query: 60 IITKHNID-----GRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
I ++ D R ++ +++D IVK + E+ I + E+ +K I F
Sbjct: 383 YIPYNDEDQKKLPERWAQTYGVVCRKLIDLIVKAMIELQITEEEYCLIKTISLF 436
>Z70210-8|CAA94154.2| 414|Caenorhabditis elegans Hypothetical
protein K08H2.8 protein.
Length = 414
Score = 34.7 bits (76), Expect = 0.034
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 4 QLLILVEWAKYIPAFTEL-HLDDQVALLRAHAGEHLLLGCARRSLHL--KD-ILLLGNNC 59
Q++++ EW + +P F L +D+ LLRA A +++LL + L +D ++L+ NN
Sbjct: 210 QMVLMFEWVEKLPEFRMLCDHNDKTKLLRAFALKYMLLDNVYHTYELGFRDRLVLVNNNY 269
Query: 60 II--TKHNIDGRMDIDIS-----MIG--MR-VMDEIVKPLREIDIDDTEFACLKAIVFFD 109
I+ N G +D + M G MR +++E+V P+ ++ E ++ I+F++
Sbjct: 270 IVPGVPINFKGSDVVDENQMRDIMFGEPMRALINELVLPIGSQNMLYGEIMTIRRIMFWN 329
Query: 110 P 110
P
Sbjct: 330 P 330
>AY204169-1|AAO39173.1| 414|Caenorhabditis elegans nuclear receptor
NHR-32 protein.
Length = 414
Score = 34.7 bits (76), Expect = 0.034
Identities = 34/121 (28%), Positives = 65/121 (53%), Gaps = 14/121 (11%)
Query: 4 QLLILVEWAKYIPAFTEL-HLDDQVALLRAHAGEHLLLGCARRSLHL--KD-ILLLGNNC 59
Q++++ EW + +P F L +D+ LLRA A +++LL + L +D ++L+ NN
Sbjct: 210 QMVLMFEWVEKLPEFRMLCDHNDKTKLLRAFALKYMLLDNVYHTYELGFRDRLVLVNNNY 269
Query: 60 II--TKHNIDGRMDIDIS-----MIG--MR-VMDEIVKPLREIDIDDTEFACLKAIVFFD 109
I+ N G +D + M G MR +++E+V P+ ++ E ++ I+F++
Sbjct: 270 IVPGVPINFKGSDVVDENQMRDIMFGEPMRALINELVLPIGSQNMLYGEIMTIRRIMFWN 329
Query: 110 P 110
P
Sbjct: 330 P 330
>U41559-7|AAV34794.1| 544|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 31, isoform c protein.
Length = 544
Score = 33.9 bits (74), Expect = 0.059
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
R ++E+V PLR++++ + E LKAI+ +P A
Sbjct: 311 RTLNELVAPLRKLNLKEEEIVPLKAIIILNPNA 343
>U41559-6|AAC24263.1| 583|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 31, isoform a protein.
Length = 583
Score = 33.9 bits (74), Expect = 0.059
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
R ++E+V PLR++++ + E LKAI+ +P A
Sbjct: 350 RTLNELVAPLRKLNLKEEEIVPLKAIIILNPNA 382
>AF273779-1|AAG15128.1| 565|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 565
Score = 33.9 bits (74), Expect = 0.059
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
R ++E+V PLR++++ + E LKAI+ +P A
Sbjct: 332 RTLNELVAPLRKLNLKEEEIVPLKAIIILNPNA 364
>AF273778-1|AAG15127.1| 595|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 595
Score = 33.9 bits (74), Expect = 0.059
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
R ++E+V PLR++++ + E LKAI+ +P A
Sbjct: 362 RTLNELVAPLRKLNLKEEEIVPLKAIIILNPNA 394
>AF273777-1|AAG15126.1| 421|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 421
Score = 33.9 bits (74), Expect = 0.059
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
R ++E+V PLR++++ + E LKAI+ +P A
Sbjct: 188 RTLNELVAPLRKLNLKEEEIVPLKAIIILNPNA 220
>AF273776-1|AAG15125.1| 583|Caenorhabditis elegans nuclear receptor
NHR-31 protein.
Length = 583
Score = 33.9 bits (74), Expect = 0.059
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFDPRA 112
R ++E+V PLR++++ + E LKAI+ +P A
Sbjct: 350 RTLNELVAPLRKLNLKEEEIVPLKAIIILNPNA 382
>AF016665-9|AAC71177.1| 363|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 166 protein.
Length = 363
Score = 33.5 bits (73), Expect = 0.078
Identities = 29/106 (27%), Positives = 49/106 (46%), Gaps = 1/106 (0%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKH 64
+L+ VE K + + +L L D++ LL + L A S K +L +
Sbjct: 169 MLLAVETIKSLDFYPKLLLSDRILLLETVTLKSFHLSVAFDSFSQKKEKILAPDGSEMFP 228
Query: 65 NIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
+ +MD +I MR++ VKPL + + +TE+ L IV +P
Sbjct: 229 DSLNKMDFCKDLI-MRLLTTPVKPLIAMKLTETEYLLLGIIVICNP 273
>U97003-6|AAB52273.1| 402|Caenorhabditis elegans Hypothetical
protein F47C10.8 protein.
Length = 402
Score = 31.9 bits (69), Expect = 0.24
Identities = 27/112 (24%), Positives = 52/112 (46%), Gaps = 10/112 (8%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIIT 62
Q + I VE + + DD++ LLR + + + L A RSL+ K + +IT
Sbjct: 213 QAIYIAVEMFLSLDFMNSIENDDKIVLLRNFSSKSMQLDSAMRSLNAK------VDRVIT 266
Query: 63 KHNIDGRMDIDISMIGMRVMDEI----VKPLREIDIDDTEFACLKAIVFFDP 110
+ D+ ++M + ++ I V + E+ + + E A L ++F +P
Sbjct: 267 PDGNEVYSDLLLAMFSIDFLNSIRSSLVVRVEELKVTEQEHALLNFLLFCNP 318
>U40940-3|AAN39667.1| 455|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform c protein.
Length = 455
Score = 31.5 bits (68), Expect = 0.32
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCA---RRSLHLKDILLLGNNC 59
+ L +++EW K +P L L+D++AL++A A L+ A R ++ L +C
Sbjct: 251 RDLSLMLEWGKCLPIMERLLLNDKLALMKAFAPIFPLIQLAFYTRNEFECDIVIKLEPDC 310
Query: 60 IITKHNIDGRMDI-DISMI--GMR-----------VMDEIVKPLREIDIDDTEFACLKAI 105
T I R++ D S I G + ++D K +R++ I ++ F K +
Sbjct: 311 --TPKPIPERLNYPDGSFIEKGNKPANTWEEMHTMLIDGCYKMMRQLKIKESTFVLYKML 368
Query: 106 VFFDPRA 112
+F +P A
Sbjct: 369 LFHNPDA 375
>U40940-2|AAM69090.1| 434|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform b protein.
Length = 434
Score = 31.5 bits (68), Expect = 0.32
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCA---RRSLHLKDILLLGNNC 59
+ L +++EW K +P L L+D++AL++A A L+ A R ++ L +C
Sbjct: 230 RDLSLMLEWGKCLPIMERLLLNDKLALMKAFAPIFPLIQLAFYTRNEFECDIVIKLEPDC 289
Query: 60 IITKHNIDGRMDI-DISMI--GMR-----------VMDEIVKPLREIDIDDTEFACLKAI 105
T I R++ D S I G + ++D K +R++ I ++ F K +
Sbjct: 290 --TPKPIPERLNYPDGSFIEKGNKPANTWEEMHTMLIDGCYKMMRQLKIKESTFVLYKML 347
Query: 106 VFFDPRA 112
+F +P A
Sbjct: 348 LFHNPDA 354
>U40940-1|AAM69089.1| 439|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 40, isoform a protein.
Length = 439
Score = 31.5 bits (68), Expect = 0.32
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCA---RRSLHLKDILLLGNNC 59
+ L +++EW K +P L L+D++AL++A A L+ A R ++ L +C
Sbjct: 235 RDLSLMLEWGKCLPIMERLLLNDKLALMKAFAPIFPLIQLAFYTRNEFECDIVIKLEPDC 294
Query: 60 IITKHNIDGRMDI-DISMI--GMR-----------VMDEIVKPLREIDIDDTEFACLKAI 105
T I R++ D S I G + ++D K +R++ I ++ F K +
Sbjct: 295 --TPKPIPERLNYPDGSFIEKGNKPANTWEEMHTMLIDGCYKMMRQLKIKESTFVLYKML 352
Query: 106 VFFDPRA 112
+F +P A
Sbjct: 353 LFHNPDA 359
>AL031632-6|CAA21008.1| 338|Caenorhabditis elegans Hypothetical
protein Y32B12B.6 protein.
Length = 338
Score = 31.5 bits (68), Expect = 0.32
Identities = 25/110 (22%), Positives = 51/110 (46%), Gaps = 2/110 (1%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHL-KDILLLGNNCIITK 63
L+ V + K P L D++A++R + L + R+ L K+++ + I
Sbjct: 151 LVSTVYFMKQFPFVYFARLQDRIAIIRETFLKVALFSASFRAYALGKEVISFPDGSSIFP 210
Query: 64 HNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRAT 113
R+ D++M + + ++ +RE+ I + EF + I+F +P T
Sbjct: 211 SKETERIVKDLNMPEL-ITGRLISKMRELQIANEEFLLVLVILFCNPAIT 259
>AF273782-1|AAG15131.1| 439|Caenorhabditis elegans nuclear receptor
NHR-40 protein.
Length = 439
Score = 31.5 bits (68), Expect = 0.32
Identities = 33/127 (25%), Positives = 60/127 (47%), Gaps = 19/127 (14%)
Query: 3 QQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCA---RRSLHLKDILLLGNNC 59
+ L +++EW K +P L L+D++AL++A A L+ A R ++ L +C
Sbjct: 235 RDLSLMLEWGKCLPIMERLLLNDKLALMKAFAPIFPLIQLAFYTRNEFECDIVIKLEPDC 294
Query: 60 IITKHNIDGRMDI-DISMI--GMR-----------VMDEIVKPLREIDIDDTEFACLKAI 105
T I R++ D S I G + ++D K +R++ I ++ F K +
Sbjct: 295 --TPKPIPERLNYPDGSFIEKGNKPANTWEEMHTMLIDGCYKMMRQLKIKESTFVLYKML 352
Query: 106 VFFDPRA 112
+F +P A
Sbjct: 353 LFHNPDA 359
>AY204162-1|AAO39166.1| 112|Caenorhabditis elegans nuclear receptor
NHR-1 protein.
Length = 112
Score = 30.7 bits (66), Expect = 0.55
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 84 EIVKPLREIDIDDTEFACLKAIVFFDPRA 112
EI+ P R++ + EFA KA +FF+P A
Sbjct: 1 EIMIPFRKLQLSVAEFATFKAALFFNPDA 29
>AF068713-7|AAC17798.2| 359|Caenorhabditis elegans Hypothetical
protein T24A6.11 protein.
Length = 359
Score = 30.7 bits (66), Expect = 0.55
Identities = 24/89 (26%), Positives = 35/89 (39%), Gaps = 1/89 (1%)
Query: 22 HLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCIITKHNIDGRMDIDISMIGMRV 81
H D V L A LL R D L I + ++ +S I ++
Sbjct: 191 HSDKMVLLQNFSAKATLLFNSLRTVRGNNDRLTTPGGHEIVPDLMSTLFNVSLSFI-RQI 249
Query: 82 MDEIVKPLREIDIDDTEFACLKAIVFFDP 110
+V L E++I D EF + I+F DP
Sbjct: 250 RSRVVSKLIELEITDEEFLLVTVILFCDP 278
>Z82259-1|CAB05126.3| 437|Caenorhabditis elegans Hypothetical
protein C28D4.1 protein.
Length = 437
Score = 29.9 bits (64), Expect = 0.96
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 82 MDEIVKPLREIDIDDTEFACLKAIVFFDP 110
M ++V ++E+++D+TE LKAI P
Sbjct: 297 MADVVNSMKELEMDETEMVLLKAICHLQP 325
>AY305849-1|AAR11993.1| 437|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 437
Score = 29.9 bits (64), Expect = 0.96
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 82 MDEIVKPLREIDIDDTEFACLKAIVFFDP 110
M ++V ++E+++D+TE LKAI P
Sbjct: 297 MADVVNSMKELEMDETEMVLLKAICHLQP 325
>AY204184-1|AAO39188.1| 353|Caenorhabditis elegans nuclear receptor
NHR-100 protein.
Length = 353
Score = 29.9 bits (64), Expect = 0.96
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 82 MDEIVKPLREIDIDDTEFACLKAIVFFDP 110
M ++V ++E+++D+TE LKAI P
Sbjct: 213 MADVVNSMKELEMDETEMVLLKAICHLQP 241
>AF083226-1|AAD03684.1| 560|Caenorhabditis elegans nuclear receptor
NHR-8 protein.
Length = 560
Score = 29.9 bits (64), Expect = 0.96
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL 40
I++ L +V A + F ELH+DD+ LL++ GE L++
Sbjct: 371 IEEALRRIVNMACQLSLFRELHVDDRKNLLKSGFGELLIV 410
>AF036702-12|AAP31437.1| 559|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 8, isoform b protein.
Length = 559
Score = 29.9 bits (64), Expect = 0.96
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL 40
I++ L +V A + F ELH+DD+ LL++ GE L++
Sbjct: 370 IEEALRRIVNMACQLSLFRELHVDDRKNLLKSGFGELLIV 409
>AF036702-11|AAP31436.1| 560|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 8, isoform a protein.
Length = 560
Score = 29.9 bits (64), Expect = 0.96
Identities = 15/40 (37%), Positives = 25/40 (62%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL 40
I++ L +V A + F ELH+DD+ LL++ GE L++
Sbjct: 371 IEEALRRIVNMACQLSLFRELHVDDRKNLLKSGFGELLIV 410
>AC024849-3|AAK68547.1| 327|Caenorhabditis elegans Hypothetical
protein Y67D8B.2 protein.
Length = 327
Score = 29.9 bits (64), Expect = 0.96
Identities = 11/30 (36%), Positives = 21/30 (70%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFFD 109
R+++++V PLR++ + EF +K I+ FD
Sbjct: 192 RIVNQVVYPLRKVGMVKEEFVLVKLILLFD 221
>U97008-4|AAB52312.1| 430|Caenorhabditis elegans Hypothetical
protein C03G6.12 protein.
Length = 430
Score = 29.5 bits (63), Expect = 1.3
Identities = 30/108 (27%), Positives = 47/108 (43%), Gaps = 13/108 (12%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGN--NCIIT 62
+L +E+ K F EL D+ L R H LL C ++LH+ + N +C+
Sbjct: 249 MLTTIEYFKTFKFFHELSSRDKFVLAR-----HTLLLC--QNLHISHYTVSHNFDSCLQP 301
Query: 63 KHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
++ + D I M ++PL I E+ LKAI F +P
Sbjct: 302 DGSMQPKQDERHYPIAMMS----IEPLVRCKIQHVEYVLLKAICFCNP 345
>AF016443-2|AAC24272.1| 359|Caenorhabditis elegans Hypothetical
protein C17E7.6 protein.
Length = 359
Score = 29.5 bits (63), Expect = 1.3
Identities = 26/94 (27%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 20 ELHLDDQVALLRAHAGEHLLLGCARRS-LHLKDILLLGNNCIITKHNIDGRMDID--ISM 76
+L D++ LLR A + LLG A R+ L KD + + I + +
Sbjct: 183 KLSTPDKLILLRHSASKCALLGGAMRTYLDKKDRMTTVDGQDIYPKEMRALLGFQQGADQ 242
Query: 77 IGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
RV ++ L E+D+ E + AI+F DP
Sbjct: 243 FLDRVRSLLISKLAELDVTTEECILISAIIFCDP 276
>Z81050-8|CAB02857.2| 437|Caenorhabditis elegans Hypothetical
protein C50B6.8 protein.
Length = 437
Score = 28.7 bits (61), Expect = 2.2
Identities = 29/111 (26%), Positives = 50/111 (45%), Gaps = 11/111 (9%)
Query: 1 IKQQLLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLGNNCI 60
I L++ +E+AK F +L D++ L+R + A +LH+ +
Sbjct: 251 ILYDLMVSIEYAKTFMFFHQLDSRDRLVLMR-------YVALALMNLHISYFTVAKKYDT 303
Query: 61 ITKHNIDGRM-DIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDP 110
I + DG++ + M+ + I PL +I +TEF LKAI +P
Sbjct: 304 II--HPDGKLAPMKKGMVYAETVMSIA-PLIRCEIQETEFVLLKAICLCNP 351
>AF024494-13|AAB70328.1| 398|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 260 protein.
Length = 398
Score = 28.3 bits (60), Expect = 2.9
Identities = 12/26 (46%), Positives = 14/26 (53%)
Query: 88 PLREIDIDDTEFACLKAIVFFDPRAT 113
P R + IDD E A LK I+ P T
Sbjct: 292 PFRRLQIDDVECAALKIILLLTPSCT 317
>Z81074-1|CAB03044.2| 492|Caenorhabditis elegans Hypothetical
protein F32B6.1 protein.
Length = 492
Score = 27.9 bits (59), Expect = 3.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFF 108
R ++ ++ P+ +DD E +K I+FF
Sbjct: 366 RYLNYVIYPMHNFQMDDAEMVLIKCIMFF 394
>Z54270-7|CAE48496.1| 492|Caenorhabditis elegans Hypothetical
protein F11C1.6b protein.
Length = 492
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 KQQLLILVEWAKYIPAFTELHLDDQVALLR 31
++ L +V WAK F++L LDDQ+ LL+
Sbjct: 277 EENLKDIVIWAKNDQLFSKLSLDDQMILLQ 306
>Z54270-6|CAA91028.1| 572|Caenorhabditis elegans Hypothetical
protein F11C1.6a protein.
Length = 572
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 KQQLLILVEWAKYIPAFTELHLDDQVALLR 31
++ L +V WAK F++L LDDQ+ LL+
Sbjct: 357 EENLKDIVIWAKNDQLFSKLSLDDQMILLQ 386
>AY349018-1|AAQ55498.1| 310|Caenorhabditis elegans NHR-91B protein.
Length = 310
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 8 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL 40
LVEW K +P F EL ++ LL E +LL
Sbjct: 102 LVEWTKTLPFFDELPVEAHTHLLTQRWAELVLL 134
>AY349017-1|AAQ55497.1| 474|Caenorhabditis elegans NHR-91A protein.
Length = 474
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 8 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL 40
LVEW K +P F EL ++ LL E +LL
Sbjct: 266 LVEWTKTLPFFDELPVEAHTHLLTQRWAELVLL 298
>AL132841-5|CAI46629.1| 310|Caenorhabditis elegans Hypothetical
protein Y15E3A.1b protein.
Length = 310
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 8 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL 40
LVEW K +P F EL ++ LL E +LL
Sbjct: 102 LVEWTKTLPFFDELPVEAHTHLLTQRWAELVLL 134
>AL132841-4|CAB60329.2| 474|Caenorhabditis elegans Hypothetical
protein Y15E3A.1a protein.
Length = 474
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 8 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL 40
LVEW K +P F EL ++ LL E +LL
Sbjct: 266 LVEWTKTLPFFDELPVEAHTHLLTQRWAELVLL 298
>AF273835-1|AAG15183.1| 476|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 476
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 8 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL 40
LVEW K +P F EL ++ LL E +LL
Sbjct: 268 LVEWTKTLPFFDELPVEAHTHLLTQRWAELVLL 300
>AF273834-1|AAG15182.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 8 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL 40
LVEW K +P F EL ++ LL E +LL
Sbjct: 267 LVEWTKTLPFFDELPVEAHTHLLTQRWAELVLL 299
>AF273833-1|AAG15181.1| 475|Caenorhabditis elegans nuclear receptor
NHR-91 protein.
Length = 475
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/33 (42%), Positives = 18/33 (54%)
Query: 8 LVEWAKYIPAFTELHLDDQVALLRAHAGEHLLL 40
LVEW K +P F EL ++ LL E +LL
Sbjct: 267 LVEWTKTLPFFDELPVEAHTHLLTQRWAELVLL 299
>AF179215-1|AAF67039.1| 492|Caenorhabditis elegans NHR-25 beta
protein.
Length = 492
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 KQQLLILVEWAKYIPAFTELHLDDQVALLR 31
++ L +V WAK F++L LDDQ+ LL+
Sbjct: 277 EENLKDIVIWAKNDQLFSKLSLDDQMILLQ 306
>AF179214-1|AAF67038.1| 568|Caenorhabditis elegans NHR-25 alpha
protein.
Length = 568
Score = 27.9 bits (59), Expect = 3.9
Identities = 13/30 (43%), Positives = 20/30 (66%)
Query: 2 KQQLLILVEWAKYIPAFTELHLDDQVALLR 31
++ L +V WAK F++L LDDQ+ LL+
Sbjct: 353 EENLKDIVIWAKNDQLFSKLSLDDQMILLQ 382
>AF083223-1|AAD03681.1| 492|Caenorhabditis elegans nuclear receptor
NHR-4 protein.
Length = 492
Score = 27.9 bits (59), Expect = 3.9
Identities = 9/29 (31%), Positives = 17/29 (58%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAIVFF 108
R ++ ++ P+ +DD E +K I+FF
Sbjct: 366 RYLNYVIYPMHNFQMDDAEMVLIKCIMFF 394
>Z82059-10|CAB04878.2| 589|Caenorhabditis elegans Hypothetical
protein T27E9.4a protein.
Length = 589
Score = 27.5 bits (58), Expect = 5.1
Identities = 24/96 (25%), Positives = 45/96 (46%), Gaps = 3/96 (3%)
Query: 15 IPAFTELHLDD-QVALL-RAHAGEHLLLGCARRSLHLKDILLLGNNCIITKHNIDGRMDI 72
IP +T+ LD +V +L + + + R L D+ LL N ++ H + I
Sbjct: 14 IPLYTDDDLDFIKVDILDEMYKKSYSIFNELRSKCQLCDVALLVENRKLSAHKVILAATI 73
Query: 73 DISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFF 108
GM +D + ++EI+I+D + + A++ F
Sbjct: 74 PYFR-GMFTLDLMEANMKEINIEDMNYETVDALLSF 108
>U97008-3|AAB52308.1| 380|Caenorhabditis elegans Hypothetical
protein C03G6.8 protein.
Length = 380
Score = 27.5 bits (58), Expect = 5.1
Identities = 26/111 (23%), Positives = 49/111 (44%), Gaps = 14/111 (12%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCARRSLHLKDILLLG--NNCIIT 62
LL + E+ K F ++ +D++ L R H++L C + LH + +N +
Sbjct: 200 LLTITEYIKTFECFHKISSNDRLVLTR-----HIILMC--KILHESHYAVSRKFDNYLNP 252
Query: 63 KHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKAIVFFDPRAT 113
+ + ++ S++ M + PL I E+ LKA+ F +P T
Sbjct: 253 DGTQESKTEMHHSLLAMSI-----SPLVRTHIQPVEYVLLKAMCFCNPAVT 298
>U64835-7|AAG24198.2| 427|Caenorhabditis elegans Hypothetical
protein T09D3.4 protein.
Length = 427
Score = 27.5 bits (58), Expect = 5.1
Identities = 10/20 (50%), Positives = 15/20 (75%)
Query: 81 VMDEIVKPLREIDIDDTEFA 100
++DE+ KPL E+ + DTE A
Sbjct: 315 IIDEVCKPLYELQLSDTETA 334
>U55365-8|AAA98573.2| 383|Caenorhabditis elegans Hypothetical
protein C12D5.2 protein.
Length = 383
Score = 27.5 bits (58), Expect = 5.1
Identities = 14/39 (35%), Positives = 23/39 (58%), Gaps = 5/39 (12%)
Query: 5 LLILVEWAKYIPAFTELHLDDQVALLRAHAGEHLLLGCA 43
LL +E+ K P F +L DQ+ L+R H+++GC+
Sbjct: 200 LLTSIEFLKTFPFFLKLDTKDQLILMR-----HVVVGCS 233
>U41536-4|AAK39238.2| 419|Caenorhabditis elegans Defective
fasciculation of axonsprotein 1 protein.
Length = 419
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 82 MDEIVKPLREIDIDDTEFACLKAIVFFDPR 111
+ ++ R +D+ EF CLKAI F R
Sbjct: 294 LTSLMLKFRRLDVSPAEFNCLKAITIFMKR 323
>AF176087-1|AAD55066.1| 419|Caenorhabditis elegans nuclear hormone
receptor FAX-1 protein.
Length = 419
Score = 27.5 bits (58), Expect = 5.1
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 82 MDEIVKPLREIDIDDTEFACLKAIVFFDPR 111
+ ++ R +D+ EF CLKAI F R
Sbjct: 294 LTSLMLKFRRLDVSPAEFNCLKAITIFMKR 323
>Z81537-3|CAB04374.1| 348|Caenorhabditis elegans Hypothetical
protein F41D3.3 protein.
Length = 348
Score = 26.6 bits (56), Expect = 9.0
Identities = 12/25 (48%), Positives = 15/25 (60%)
Query: 81 VMDEIVKPLREIDIDDTEFACLKAI 105
V +V PL + +D TEFA KAI
Sbjct: 250 VKSTLVSPLSRLRLDITEFAAFKAI 274
>Z46937-3|CAA87058.2| 457|Caenorhabditis elegans Hypothetical
protein F43C1.4 protein.
Length = 457
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAI 105
R D I +P+R + + EFA LKA+
Sbjct: 343 RFNDAICRPIRNLKMTHVEFAALKAL 368
>AL021479-6|CAA16320.2| 420|Caenorhabditis elegans Hypothetical
protein Y22F5A.1 protein.
Length = 420
Score = 26.6 bits (56), Expect = 9.0
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 58 NCIITKHNIDGRMDIDISMIGMRVMDEIVKPLREIDIDDTEFACLKA 104
NC +G M + R+M+E+ KPL E+++ E A + A
Sbjct: 284 NCSFIYKKAEG-MKFFMENFNTRMMEEVGKPLVELELTSVEIAFMLA 329
>AF273771-1|AAG15120.1| 454|Caenorhabditis elegans nuclear receptor
NHR-20 protein.
Length = 454
Score = 26.6 bits (56), Expect = 9.0
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 80 RVMDEIVKPLREIDIDDTEFACLKAI 105
R D I +P+R + + EFA LKA+
Sbjct: 340 RFNDAICRPIRNLKMTHVEFAALKAL 365
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.327 0.143 0.431
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,261,643
Number of Sequences: 27539
Number of extensions: 103359
Number of successful extensions: 495
Number of sequences better than 10.0: 120
Number of HSP's better than 10.0 without gapping: 102
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 346
Number of HSP's gapped (non-prelim): 133
length of query: 166
length of database: 12,573,161
effective HSP length: 76
effective length of query: 90
effective length of database: 10,480,197
effective search space: 943217730
effective search space used: 943217730
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.6 bits)
S2: 56 (26.6 bits)
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