GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001946-TA|BGIBMGA001946-PA|undefined
         (71 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein ...    23   1.4  
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.           21   3.2  
AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...    21   4.3  
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.             20   7.5  
CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.           20   9.9  
AY748841-1|AAV28189.1|  158|Anopheles gambiae cytochrome P450 pr...    20   9.9  

>AY939827-1|AAY18208.1|  680|Anopheles gambiae CTCF-like protein
           protein.
          Length = 680

 Score = 22.6 bits (46), Expect = 1.4
 Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 2/54 (3%)

Query: 14  ICPMGYS--AASEYMVPAHVWEKQHNAPYSDFQSRSGGADHRGINVTYNSEDPH 65
           +C  G+   A+ +  V  H   K H   + D    + G   R I   +  E PH
Sbjct: 159 VCERGFKTLASLQNHVNTHTGTKPHRCKHCDNCFTTSGELIRHIRYRHTHERPH 212


>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
          Length = 1459

 Score = 21.4 bits (43), Expect = 3.2
 Identities = 6/13 (46%), Positives = 11/13 (84%)

Query: 57   VTYNSEDPHFISK 69
            +TY+ +D HF+S+
Sbjct: 1079 ITYSLQDEHFVSQ 1091


>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score = 21.0 bits (42), Expect = 4.3
 Identities = 9/35 (25%), Positives = 15/35 (42%)

Query: 21  AASEYMVPAHVWEKQHNAPYSDFQSRSGGADHRGI 55
           A  +Y V  + W K      +  +   GG +H+ I
Sbjct: 185 AYHKYKVKRNCWPKVRGVAMNPVEHPHGGGNHQHI 219


>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
          Length = 1231

 Score = 20.2 bits (40), Expect = 7.5
 Identities = 7/21 (33%), Positives = 13/21 (61%)

Query: 22  ASEYMVPAHVWEKQHNAPYSD 42
           ++EY+V    + KQ   P+S+
Sbjct: 178 STEYIVRVRAYTKQGAGPFSE 198


>CR954256-1|CAJ14142.1|  376|Anopheles gambiae actin protein.
          Length = 376

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 9/29 (31%), Positives = 16/29 (55%)

Query: 37 NAPYSDFQSRSGGADHRGINVTYNSEDPH 65
          +AP + F S  G   H+G+ V   ++D +
Sbjct: 26 DAPRAVFPSIVGRPRHQGVMVGMGNKDAY 54


>AY748841-1|AAV28189.1|  158|Anopheles gambiae cytochrome P450
          protein.
          Length = 158

 Score = 19.8 bits (39), Expect = 9.9
 Identities = 10/36 (27%), Positives = 16/36 (44%)

Query: 18 GYSAASEYMVPAHVWEKQHNAPYSDFQSRSGGADHR 53
          G+SA   ++V A  +  QH       Q+ + G   R
Sbjct: 33 GHSAVGNFLVKAFGYIVQHPEVQQRIQAEADGVLER 68


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.316    0.131    0.411 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 80,083
Number of Sequences: 2123
Number of extensions: 2576
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of query: 71
length of database: 516,269
effective HSP length: 49
effective length of query: 22
effective length of database: 412,242
effective search space:  9069324
effective search space used:  9069324
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 39 (20.7 bits)
S2: 39 (19.8 bits)