GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001945-TA|BGIBMGA001945-PA|IPR000437|Prokaryotic
membrane lipoprotein lipid attachment site, IPR006761|Twisted
gastrulation (Tsg) protein
         (240 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1 pr...    27   0.49 
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    24   4.6  

>AJ271193-1|CAB66001.1| 1623|Anopheles gambiae laminin gamma 1
           precursor protein.
          Length = 1623

 Score = 27.1 bits (57), Expect = 0.49
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 15/64 (23%)

Query: 166 CDKCRASCRSMGA-NSIRWFHDGCCEC----VGDKC-----LYYGINESRCLAC---PGG 212
           C+ C  +C  +G+ N+    + G C C    VG KC      YYG +E  C AC   P G
Sbjct: 936 CESC--NCDPIGSYNASCDTYSGDCFCKPGVVGKKCDKCAPAYYGFSEDGCHACDCDPSG 993

Query: 213 KETS 216
            + S
Sbjct: 994 SKGS 997


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 23.8 bits (49), Expect = 4.6
 Identities = 9/20 (45%), Positives = 11/20 (55%)

Query: 195 KCLYYGINESRCLACPGGKE 214
           KC  YG +E  C  C G K+
Sbjct: 645 KCTGYGFHEQFCQECTGYKK 664


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.134    0.428 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 244,938
Number of Sequences: 2123
Number of extensions: 9921
Number of successful extensions: 13
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 12
Number of HSP's gapped (non-prelim): 2
length of query: 240
length of database: 516,269
effective HSP length: 62
effective length of query: 178
effective length of database: 384,643
effective search space: 68466454
effective search space used: 68466454
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 47 (23.0 bits)