Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001945-TA|BGIBMGA001945-PA|IPR000437|Prokaryotic
membrane lipoprotein lipid attachment site, IPR006761|Twisted
gastrulation (Tsg) protein
(240 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC020490-1|AAH20490.1| 223|Homo sapiens twisted gastrulation ho... 116 7e-26
AJ297391-1|CAC05581.1| 223|Homo sapiens twisted gastrulation pr... 116 7e-26
AF294628-1|AAG10076.1| 223|Homo sapiens twisted gastrulation pr... 116 7e-26
AF196834-1|AAG43468.1| 223|Homo sapiens twisted gastrulation-li... 116 7e-26
AK075550-1|BAC11693.1| 223|Homo sapiens protein ( Homo sapiens ... 113 4e-25
AK027629-1|BAB55246.1| 148|Homo sapiens protein ( Homo sapiens ... 106 6e-23
BX088650-8|CAM26299.1| 567|Homo sapiens PHD finger protein 1 pr... 35 0.29
BX088650-7|CAM26298.1| 457|Homo sapiens PHD finger protein 1 pr... 35 0.29
BC008834-1|AAH08834.1| 567|Homo sapiens PHD finger protein 1 pr... 35 0.29
AL662799-9|CAI18272.1| 567|Homo sapiens PHD finger protein 1 pr... 35 0.29
AL662799-8|CAI18271.1| 457|Homo sapiens PHD finger protein 1 pr... 35 0.29
AL050332-3|CAC38367.1| 457|Homo sapiens PHD finger protein 1 pr... 35 0.29
AL050332-2|CAC38366.1| 567|Homo sapiens PHD finger protein 1 pr... 35 0.29
AL021366-5|CAA16159.1| 567|Homo sapiens cICK0721Q.4.2 (PHD fing... 35 0.29
AL021366-4|CAA16158.1| 457|Homo sapiens cICK0721Q.4.1 (PHD fing... 35 0.29
AF052205-1|AAC13273.1| 567|Homo sapiens PHD finger protein 2 pr... 35 0.29
AF029678-1|AAC52062.1| 457|Homo sapiens PHF1 protein. 35 0.29
X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor rec... 33 1.2
M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor rec... 33 1.2
M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor rec... 33 1.2
M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein. 33 1.2
M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor rec... 33 1.2
M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor nec... 33 1.2
BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor r... 33 1.2
AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor r... 33 1.2
BC030816-1|AAH30816.1| 868|Homo sapiens Unknown (protein for MG... 31 4.7
AY243503-1|AAQ89957.1| 3574|Homo sapiens selectin-like protein p... 31 4.7
AL592463-2|CAH73558.1| 3548|Homo sapiens sushi, von Willebrand f... 31 4.7
AL592463-1|CAH73557.1| 845|Homo sapiens sushi, von Willebrand f... 31 4.7
AL354982-2|CAH74139.1| 3548|Homo sapiens sushi, von Willebrand f... 31 4.7
AL354982-1|CAH74138.1| 845|Homo sapiens sushi, von Willebrand f... 31 4.7
AL158158-3|CAI14068.1| 3548|Homo sapiens sushi, von Willebrand f... 31 4.7
AK027870-1|BAB55420.1| 1316|Homo sapiens protein ( Homo sapiens ... 31 4.7
AJ619977-1|CAF04067.1| 3574|Homo sapiens SEL-OB protein protein. 31 4.7
U52426-1|AAC51627.1| 685|Homo sapiens GOK protein. 30 8.3
BC021300-1|AAH21300.1| 685|Homo sapiens stromal interaction mol... 30 8.3
>BC020490-1|AAH20490.1| 223|Homo sapiens twisted gastrulation
homolog 1 (Drosophila) protein.
Length = 223
Score = 116 bits (279), Expect = 7e-26
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 8 IVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXX--X 65
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCD 72
Query: 66 XVDMCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYR 125
V MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS +
Sbjct: 73 CVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHE 131
Query: 126 PVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVAYMSQCMSCDKCRASCRSMGAN 179
+ E H Q+V S V+ + CTV Y CMS +C+ SC SMGA+
Sbjct: 132 NLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMSIHQCKISCESMGAS 191
Query: 180 SIRWFHDGCCECVGDKCLYYGINESRCLAC 209
RWFH+ CCEC+G +C+ YG +C+ C
Sbjct: 192 KYRWFHNACCECIGPECIDYGSKTVKCMNC 221
>AJ297391-1|CAC05581.1| 223|Homo sapiens twisted gastrulation
protein protein.
Length = 223
Score = 116 bits (279), Expect = 7e-26
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 8 IVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXX--X 65
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCD 72
Query: 66 XVDMCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYR 125
V MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS +
Sbjct: 73 CVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHE 131
Query: 126 PVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVAYMSQCMSCDKCRASCRSMGAN 179
+ E H Q+V S V+ + CTV Y CMS +C+ SC SMGA+
Sbjct: 132 NLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMSIHQCKISCESMGAS 191
Query: 180 SIRWFHDGCCECVGDKCLYYGINESRCLAC 209
RWFH+ CCEC+G +C+ YG +C+ C
Sbjct: 192 KYRWFHNACCECIGPECIDYGSKTVKCMNC 221
>AF294628-1|AAG10076.1| 223|Homo sapiens twisted gastrulation
protein precursor protein.
Length = 223
Score = 116 bits (279), Expect = 7e-26
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 8 IVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXX--X 65
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCD 72
Query: 66 XVDMCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYR 125
V MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS +
Sbjct: 73 CVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHE 131
Query: 126 PVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVAYMSQCMSCDKCRASCRSMGAN 179
+ E H Q+V S V+ + CTV Y CMS +C+ SC SMGA+
Sbjct: 132 NLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMSIHQCKISCESMGAS 191
Query: 180 SIRWFHDGCCECVGDKCLYYGINESRCLAC 209
RWFH+ CCEC+G +C+ YG +C+ C
Sbjct: 192 KYRWFHNACCECIGPECIDYGSKTVKCMNC 221
>AF196834-1|AAG43468.1| 223|Homo sapiens twisted gastrulation-like
protein precursor protein.
Length = 223
Score = 116 bits (279), Expect = 7e-26
Identities = 69/210 (32%), Positives = 102/210 (48%), Gaps = 9/210 (4%)
Query: 8 IVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXX--X 65
I+ + +P + +CN+A+CAS VSKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDVSKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCD 72
Query: 66 XVDMCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYR 125
V MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS +
Sbjct: 73 CVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHE 131
Query: 126 PVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVAYMSQCMSCDKCRASCRSMGAN 179
+ E H Q+V S V+ + CTV Y CMS +C+ SC SMGA+
Sbjct: 132 NLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMSIHQCKISCESMGAS 191
Query: 180 SIRWFHDGCCECVGDKCLYYGINESRCLAC 209
RWFH+ CCEC+G +C+ YG +C+ C
Sbjct: 192 KYRWFHNACCECIGPECIDYGSKTVKCMNC 221
>AK075550-1|BAC11693.1| 223|Homo sapiens protein ( Homo sapiens
cDNA PSEC0250 fis, clone NT2RP3001874, highly similar to
Twisted gastrulation. ).
Length = 223
Score = 113 bits (273), Expect = 4e-25
Identities = 68/210 (32%), Positives = 101/210 (48%), Gaps = 9/210 (4%)
Query: 8 IVALICVVPIAYACNEAICASVVSKCMLTQXXXXXXXXXXXXXXXXXXXXXXXXXXX--X 65
I+ + +P + +CN+A+CAS SKC++ +
Sbjct: 13 ILMFLTWLPESLSCNKALCASDESKCLIQELCQCRPGEGNCSCCKECMLCLGALWDECCD 72
Query: 66 XVDMCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYR 125
V MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS +
Sbjct: 73 CVGMCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHE 131
Query: 126 PVP---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVAYMSQCMSCDKCRASCRSMGAN 179
+ E H Q+V S V+ + CTV Y CMS +C+ SC SMGA+
Sbjct: 132 NLVSFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMSIHQCKISCESMGAS 191
Query: 180 SIRWFHDGCCECVGDKCLYYGINESRCLAC 209
RWFH+ CCEC+G +C+ YG +C+ C
Sbjct: 192 KYRWFHNACCECIGPECIDYGSKTVKCMNC 221
>AK027629-1|BAB55246.1| 148|Homo sapiens protein ( Homo sapiens
cDNA FLJ14723 fis, clone NT2RP3001708, weakly similar to
TWISTED GASTRULATION PROTEIN PRECURSOR. ).
Length = 148
Score = 106 bits (255), Expect = 6e-23
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 69 MCPKPNDTQTELSKTSYVEELGDGVPGLFAALTSDPDAQQRWLSMTYPVDIDLSAYRPVP 128
MC N + T + S VEEL + +P LF ALT + D Q W +++PV +LS + +
Sbjct: 1 MCNPRNYSDTPPTSKSTVEELHEPIPSLFRALT-EGDTQLNWNIVSFPVAEELSHHENLV 59
Query: 129 ---EKQVVYHLQSVEQDSEPVNTDMVTFN---CTVAYMSQCMSCDKCRASCRSMGANSIR 182
E H Q+V S V+ + CTV Y CMS +C+ SC SMGA+ R
Sbjct: 60 SFLETVNQPHHQNVSVPSNNVHAPYSSDKEHMCTVVYFDDCMSIHQCKISCESMGASKYR 119
Query: 183 WFHDGCCECVGDKCLYYGINESRCLAC 209
WFH+ CCEC+G +C+ YG +C+ C
Sbjct: 120 WFHNACCECIGPECIDYGSKTVKCMNC 146
>BX088650-8|CAM26299.1| 567|Homo sapiens PHD finger protein 1
protein.
Length = 567
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>BX088650-7|CAM26298.1| 457|Homo sapiens PHD finger protein 1
protein.
Length = 457
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>BC008834-1|AAH08834.1| 567|Homo sapiens PHD finger protein 1
protein.
Length = 567
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>AL662799-9|CAI18272.1| 567|Homo sapiens PHD finger protein 1
protein.
Length = 567
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>AL662799-8|CAI18271.1| 457|Homo sapiens PHD finger protein 1
protein.
Length = 457
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>AL050332-3|CAC38367.1| 457|Homo sapiens PHD finger protein 1
protein.
Length = 457
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>AL050332-2|CAC38366.1| 567|Homo sapiens PHD finger protein 1
protein.
Length = 567
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>AL021366-5|CAA16159.1| 567|Homo sapiens cICK0721Q.4.2 (PHD finger
protein 2 (variant 2)) protein.
Length = 567
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>AL021366-4|CAA16158.1| 457|Homo sapiens cICK0721Q.4.1 (PHD finger
protein 2 (variant 1)) protein.
Length = 457
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>AF052205-1|AAC13273.1| 567|Homo sapiens PHD finger protein 2
protein.
Length = 567
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>AF029678-1|AAC52062.1| 457|Homo sapiens PHF1 protein.
Length = 457
Score = 34.7 bits (76), Expect = 0.29
Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Query: 181 IRWFHDGCCECVGDKCLYYG--INESRCLACPGGKE 214
++WFH+ C +C+ K L YG E C C GG E
Sbjct: 208 LQWFHEACTQCL-SKPLLYGDRFYEFECCVCRGGPE 242
>X55313-1|CAA39021.1| 455|Homo sapiens tumor necrosis factor
receptor type 1 protein.
Length = 455
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 141 QDSEPVNTDMVTFNCTVAYMSQCMSCDKCRASCRSMGANSIRWFHDGCCECVGDKCL-YY 199
QD++ + +F + ++ C+SC KCR + +S D C C ++ Y+
Sbjct: 77 QDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYW 136
Query: 200 GINESRCLAC 209
N +C C
Sbjct: 137 SENLFQCFNC 146
>M75866-1|AAA61201.1| 455|Homo sapiens tumor necrosis factor
receptor 1 protein.
Length = 455
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 141 QDSEPVNTDMVTFNCTVAYMSQCMSCDKCRASCRSMGANSIRWFHDGCCECVGDKCL-YY 199
QD++ + +F + ++ C+SC KCR + +S D C C ++ Y+
Sbjct: 77 QDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYW 136
Query: 200 GINESRCLAC 209
N +C C
Sbjct: 137 SENLFQCFNC 146
>M63121-1|AAA36754.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 141 QDSEPVNTDMVTFNCTVAYMSQCMSCDKCRASCRSMGANSIRWFHDGCCECVGDKCL-YY 199
QD++ + +F + ++ C+SC KCR + +S D C C ++ Y+
Sbjct: 77 QDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYW 136
Query: 200 GINESRCLAC 209
N +C C
Sbjct: 137 SENLFQCFNC 146
>M60275-1|AAA36756.1| 453|Homo sapiens TNF receptor protein.
Length = 453
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 141 QDSEPVNTDMVTFNCTVAYMSQCMSCDKCRASCRSMGANSIRWFHDGCCECVGDKCL-YY 199
QD++ + +F + ++ C+SC KCR + +S D C C ++ Y+
Sbjct: 77 QDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYW 136
Query: 200 GINESRCLAC 209
N +C C
Sbjct: 137 SENLFQCFNC 146
>M58286-1|AAA36753.1| 455|Homo sapiens tumor necrosis factor
receptor protein.
Length = 455
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 141 QDSEPVNTDMVTFNCTVAYMSQCMSCDKCRASCRSMGANSIRWFHDGCCECVGDKCL-YY 199
QD++ + +F + ++ C+SC KCR + +S D C C ++ Y+
Sbjct: 77 QDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYW 136
Query: 200 GINESRCLAC 209
N +C C
Sbjct: 137 SENLFQCFNC 146
>M33294-1|AAA03210.1| 455|Homo sapiens protein ( Human tumor
necrosis factor receptor mRNA, complete cds. ).
Length = 455
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 141 QDSEPVNTDMVTFNCTVAYMSQCMSCDKCRASCRSMGANSIRWFHDGCCECVGDKCL-YY 199
QD++ + +F + ++ C+SC KCR + +S D C C ++ Y+
Sbjct: 77 QDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYW 136
Query: 200 GINESRCLAC 209
N +C C
Sbjct: 137 SENLFQCFNC 146
>BC010140-1|AAH10140.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 141 QDSEPVNTDMVTFNCTVAYMSQCMSCDKCRASCRSMGANSIRWFHDGCCECVGDKCL-YY 199
QD++ + +F + ++ C+SC KCR + +S D C C ++ Y+
Sbjct: 77 QDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYW 136
Query: 200 GINESRCLAC 209
N +C C
Sbjct: 137 SENLFQCFNC 146
>AY131997-1|AAM77802.1| 455|Homo sapiens tumor necrosis factor
receptor superfamily, member 1A protein.
Length = 455
Score = 32.7 bits (71), Expect = 1.2
Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 141 QDSEPVNTDMVTFNCTVAYMSQCMSCDKCRASCRSMGANSIRWFHDGCCECVGDKCL-YY 199
QD++ + +F + ++ C+SC KCR + +S D C C ++ Y+
Sbjct: 77 QDTDCRECESGSFTASENHLRHCLSCSKCRKEMGQVEISSCTVDRDTVCGCRKNQYRHYW 136
Query: 200 GINESRCLAC 209
N +C C
Sbjct: 137 SENLFQCFNC 146
>BC030816-1|AAH30816.1| 868|Homo sapiens Unknown (protein for
MGC:22782) protein.
Length = 868
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 166 CDKCRASCRSMGANSIRWFHDGCCECVGDKCLYYGIN-ESRCLACPGG 212
CD+ + C MG+ H G EC+ +K YYG + C ACP G
Sbjct: 281 CDEGKDCCDRMGSCKCGT-HTGHFECICEKG-YYGKGLQYECTACPSG 326
>AY243503-1|AAQ89957.1| 3574|Homo sapiens selectin-like protein
protein.
Length = 3574
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 166 CDKCRASCRSMGANSIRWFHDGCCECVGDKCLYYGIN-ESRCLACPGG 212
CD+ + C MG+ H G EC+ +K YYG + C ACP G
Sbjct: 281 CDEGKDCCDRMGSCKCGT-HTGHFECICEKG-YYGKGLQYECTACPSG 326
>AL592463-2|CAH73558.1| 3548|Homo sapiens sushi, von Willebrand
factor type A, EGF and pentraxin domain containing 1
protein.
Length = 3548
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 166 CDKCRASCRSMGANSIRWFHDGCCECVGDKCLYYGIN-ESRCLACPGG 212
CD+ + C MG+ H G EC+ +K YYG + C ACP G
Sbjct: 258 CDEGKDCCDRMGSCKCGT-HTGHFECICEKG-YYGKGLQYECTACPSG 303
>AL592463-1|CAH73557.1| 845|Homo sapiens sushi, von Willebrand
factor type A, EGF and pentraxin domain containing 1
protein.
Length = 845
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 166 CDKCRASCRSMGANSIRWFHDGCCECVGDKCLYYGIN-ESRCLACPGG 212
CD+ + C MG+ H G EC+ +K YYG + C ACP G
Sbjct: 258 CDEGKDCCDRMGSCKCGT-HTGHFECICEKG-YYGKGLQYECTACPSG 303
>AL354982-2|CAH74139.1| 3548|Homo sapiens sushi, von Willebrand
factor type A, EGF and pentraxin domain containing 1
protein.
Length = 3548
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 166 CDKCRASCRSMGANSIRWFHDGCCECVGDKCLYYGIN-ESRCLACPGG 212
CD+ + C MG+ H G EC+ +K YYG + C ACP G
Sbjct: 258 CDEGKDCCDRMGSCKCGT-HTGHFECICEKG-YYGKGLQYECTACPSG 303
>AL354982-1|CAH74138.1| 845|Homo sapiens sushi, von Willebrand
factor type A, EGF and pentraxin domain containing 1
protein.
Length = 845
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 166 CDKCRASCRSMGANSIRWFHDGCCECVGDKCLYYGIN-ESRCLACPGG 212
CD+ + C MG+ H G EC+ +K YYG + C ACP G
Sbjct: 258 CDEGKDCCDRMGSCKCGT-HTGHFECICEKG-YYGKGLQYECTACPSG 303
>AL158158-3|CAI14068.1| 3548|Homo sapiens sushi, von Willebrand
factor type A, EGF and pentraxin domain containing 1
protein.
Length = 3548
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 166 CDKCRASCRSMGANSIRWFHDGCCECVGDKCLYYGIN-ESRCLACPGG 212
CD+ + C MG+ H G EC+ +K YYG + C ACP G
Sbjct: 258 CDEGKDCCDRMGSCKCGT-HTGHFECICEKG-YYGKGLQYECTACPSG 303
>AK027870-1|BAB55420.1| 1316|Homo sapiens protein ( Homo sapiens
cDNA FLJ14964 fis, clone PLACE4000581, moderately
similar to FIBROPELLIN I PRECURSOR. ).
Length = 1316
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 166 CDKCRASCRSMGANSIRWFHDGCCECVGDKCLYYGIN-ESRCLACPGG 212
CD+ + C MG+ H G EC+ +K YYG + C ACP G
Sbjct: 48 CDEGKDCCDRMGSCKCGT-HTGHFECICEKG-YYGKGLQYECTACPSG 93
>AJ619977-1|CAF04067.1| 3574|Homo sapiens SEL-OB protein protein.
Length = 3574
Score = 30.7 bits (66), Expect = 4.7
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 166 CDKCRASCRSMGANSIRWFHDGCCECVGDKCLYYGIN-ESRCLACPGG 212
CD+ + C MG+ H G EC+ +K YYG + C ACP G
Sbjct: 281 CDEGKDCCDRMGSCKCGT-HTGHFECICEKG-YYGKGLQYECTACPSG 326
>U52426-1|AAC51627.1| 685|Homo sapiens GOK protein.
Length = 685
Score = 29.9 bits (64), Expect = 8.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 104 PDAQQRWLSMTYPVDID-LSAYRPVPEKQVVYHLQSVEQDSEPVNTDMVTFNCTVAYMSQ 162
P+A Q+WL +T+ V++ + + EKQ++ + E+ + NT TF+ VA+ S
Sbjct: 344 PEALQKWLQLTHEVEVQYYNIKKQNAEKQLLVAKEGAEKIKKKRNTLFGTFH--VAHSSS 401
Query: 163 CMSCD 167
D
Sbjct: 402 LDDVD 406
>BC021300-1|AAH21300.1| 685|Homo sapiens stromal interaction
molecule 1 protein.
Length = 685
Score = 29.9 bits (64), Expect = 8.3
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 104 PDAQQRWLSMTYPVDID-LSAYRPVPEKQVVYHLQSVEQDSEPVNTDMVTFNCTVAYMSQ 162
P+A Q+WL +T+ V++ + + EKQ++ + E+ + NT TF+ VA+ S
Sbjct: 344 PEALQKWLQLTHEVEVQYYNIKKQNAEKQLLVAKEGAEKIKKKRNTLFGTFH--VAHSSS 401
Query: 163 CMSCD 167
D
Sbjct: 402 LDDVD 406
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.134 0.428
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 33,752,935
Number of Sequences: 224733
Number of extensions: 1345279
Number of successful extensions: 3087
Number of sequences better than 10.0: 36
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 3057
Number of HSP's gapped (non-prelim): 46
length of query: 240
length of database: 73,234,838
effective HSP length: 88
effective length of query: 152
effective length of database: 53,458,334
effective search space: 8125666768
effective search space used: 8125666768
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 64 (29.9 bits)
- SilkBase 1999-2023 -