Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001944-TA|BGIBMGA001944-PA|IPR007813|Fimbrial assembly
(328 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1 ... 41 3e-04
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 38 0.001
SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|ch... 32 0.13
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 31 0.17
SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces po... 31 0.22
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 31 0.30
SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces ... 30 0.39
SPBC1709.19c |||NifU-like protein|Schizosaccharomyces pombe|chr ... 30 0.52
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 29 0.69
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 29 0.69
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 29 0.69
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 29 0.69
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 29 0.69
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 29 0.69
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 29 0.69
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 29 0.69
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 29 0.69
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 29 0.69
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 29 0.69
SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomy... 29 1.2
SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr 1|||M... 28 1.6
SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit Psm3|Sch... 28 1.6
SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein Rad50|Schizos... 28 1.6
SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyce... 28 1.6
SPBC16E9.15 |||heat shock factor binding protein |Schizosaccharo... 28 2.1
SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces pomb... 27 2.8
SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces... 27 2.8
SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual 27 2.8
SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protei... 27 3.7
SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3 |Schizosaccha... 26 6.4
SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10 |Schizosac... 26 6.4
SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase Ubp2|Schizosacc... 26 8.5
SPAC29A4.11 |rga3||GTPase activating protein Rga3|Schizosaccharo... 26 8.5
>SPAC29E6.03c |uso1|SPAC30.07c|ER to Golgi tethering factor Uso1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1044
Score = 40.7 bits (91), Expect = 3e-04
Identities = 48/209 (22%), Positives = 97/209 (46%), Gaps = 15/209 (7%)
Query: 92 SLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEEQ-----HQI--LVS 144
S + + S ++ D L +L+ S S +L EL+ Q +QI L
Sbjct: 775 SFKNTIREAELSKKALNDNLGNKENIISDLKNKLSEESTRLQELQSQLNQDKNQIETLNE 834
Query: 145 RVDAATQDLATL-SKKLDGAPTLADTPMRLAELQRTVAVFGSEGSNDYVHSNKQIKSLDG 203
R+ AA +L+++ S + A L + + LQ + FG++ + + H+ K I SL+
Sbjct: 835 RISAAADELSSMESINKNQANELKLAKQKCSNLQEKIN-FGNKLAKE--HTEK-ISSLEK 890
Query: 204 SLQSAKNQALTATTGIEEVRNLLRQLDARTNETISNVTANQKANHELKDDVTSLNKTIVA 263
L++A TA+T +E++ + + D+ + + + + N+E +V+
Sbjct: 891 DLEAATK---TASTLSKELKTVKSENDSLKSVSNDDQNKEKSVNNEKFKEVSQALAEANE 947
Query: 264 KVEALQTRIDEIQVSVVQVFDMSLNLYCL 292
K+ A I+ ++V ++ + + SLN+ L
Sbjct: 948 KLNARDEEIERLKVDIIGLQNASLNMQSL 976
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 38.3 bits (85), Expect = 0.001
Identities = 40/202 (19%), Positives = 90/202 (44%), Gaps = 18/202 (8%)
Query: 85 DVRRQIVSLRMEMDR-------VSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEE 137
D+ RQ++++ ++D+ + +S+ +L + K LRG L L +
Sbjct: 205 DLSRQLLTVTEKLDKKEKDYEKIKEDVSSIKASLAEEQASNKSLRGEQERLEKLLVSSNK 264
Query: 138 QHQILVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQRTVAVFGSEGSNDYVHSNKQ 197
L ++ + TL +KL+ + L EL+ VA + S+ VH +K
Sbjct: 265 TVSTLRQTENSLRAECKTLQEKLEKCAINEEDSKLLEELKHNVANY----SDAIVHKDKL 320
Query: 198 IKSLDGSLQSAKNQALTATTGIEEVRNLLRQLDARTNETISNVTANQKANHELKDDVTSL 257
I+ L + N L + ++N +L+ TI ++ ++ +N +L++++ L
Sbjct: 321 IEDLSTRISEFDN--LKSERDTLSIKN--EKLEKLLRNTIGSLKDSRTSNSQLEEEMVEL 376
Query: 258 ---NKTIVAKVEALQTRIDEIQ 276
N+TI +++ ++++ +
Sbjct: 377 KESNRTIHSQLTDAESKLSSFE 398
Score = 36.7 bits (81), Expect = 0.005
Identities = 37/191 (19%), Positives = 82/191 (42%), Gaps = 5/191 (2%)
Query: 87 RRQIVSLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEEQHQILVSRV 146
+ +I +L+ E S + SV L + + +L + L +K++E+E + L++
Sbjct: 954 QEEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNKVSEVEVERNALLASN 1013
Query: 147 DAATQDLATLSKKLDGAPT-LADTPMRLAELQRTVAVFGSEGSNDYVHSNKQIKSLDGSL 205
+ DL + + T + +LQ ++V SE N + S++ KSL+
Sbjct: 1014 ERLMDDLKNNGENIASLQTEIEKKRAENDDLQSKLSVVSSEYENLLLISSQTNKSLEDKT 1073
Query: 206 QSAKNQALTATTGIEEVRNLLRQLDARTNETISNVTANQKANHELKDDVTSLNKTIVAKV 265
NQ ++++ + Q + E S + N ++KD++ +L K +
Sbjct: 1074 ----NQLKYIEKNVQKLLDEKDQRNVELEELTSKYGKLGEENAQIKDELLALRKKSKKQH 1129
Query: 266 EALQTRIDEIQ 276
+ +D+++
Sbjct: 1130 DLCANFVDDLK 1140
Score = 30.7 bits (66), Expect = 0.30
Identities = 32/170 (18%), Positives = 68/170 (40%), Gaps = 6/170 (3%)
Query: 92 SLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEEQHQILVSRVDAATQ 151
+LR +D + ++ H++ + + ++LS +L + E + L + V+ TQ
Sbjct: 714 NLREVIDNLKGKHETLEAQRNDLHSSLSDAKNTNAILSSELTKSSEDVKRLTANVETLTQ 773
Query: 152 DLATLSKKLDGAPTLADTPMRLAELQRTVAVFGSEGSNDYVHSNKQIKSLDGSLQSAKNQ 211
D + + + L R V +N + S ++K+ +N
Sbjct: 774 DSKAMKQSFTSLVNSYQSISNLYHELRDDHVNMQSQNNTLLESESKLKT------DCENL 827
Query: 212 ALTATTGIEEVRNLLRQLDARTNETISNVTANQKANHELKDDVTSLNKTI 261
T I+ V+ L+ + + ++ N K + +LK+ +SLN I
Sbjct: 828 TQQNMTLIDNVQKLMHKHVNQESKVSELKEVNGKLSLDLKNLRSSLNVAI 877
Score = 30.7 bits (66), Expect = 0.30
Identities = 34/159 (21%), Positives = 63/159 (39%), Gaps = 9/159 (5%)
Query: 120 ELRGNTSVLSHKLAELEEQHQILVSRVDAATQDLATLSKKLDG-APTLADTPMRLAELQR 178
EL+ LS L L + +S D LA LSK D A L L+
Sbjct: 854 ELKEVNGKLSLDLKNLRSSLNVAISDNDQILTQLAELSKNYDSLEQESAQLNSGLKSLEA 913
Query: 179 TVAVFGSEGSNDYVHSNKQIKSLDGSLQSAKNQALTATTGIEEVRNLLRQLDARTNETIS 238
+ +E ++ +K L + + T EE+ N L++ + ++ I+
Sbjct: 914 EKQLLHTENEELHIRLDKLTGKLKIEESKSSDLGKKLTARQEEISN-LKEENMSQSQAIT 972
Query: 239 NVTANQKANHELKDDVTSLNKTIVAKVEALQTRIDEIQV 277
+V + D+ S + + A +E L+ ++ E++V
Sbjct: 973 SVKSK-------LDETLSKSSKLEADIEHLKNKVSEVEV 1004
Score = 28.3 bits (60), Expect = 1.6
Identities = 20/100 (20%), Positives = 45/100 (45%), Gaps = 1/100 (1%)
Query: 175 ELQRTVAVFGSEGSNDYVHSNKQIKSLDGSLQSAKNQALTATTGIEEVRNLLRQLDARTN 234
E ++ +A S ++ + +NK LD Q + + + +L L +
Sbjct: 1373 ETKKEIAELSSRLEDNQLATNKLKNQLDHLNQEIRLKEDVLKEKESLIISLEESLSNQRQ 1432
Query: 235 ETISNVTANQKANHELKDDVTSLNKTIVAKVEALQTRIDE 274
+ S + A + H L DD + N +++ K+E++ + +D+
Sbjct: 1433 KESSLLDAKNELEHML-DDTSRKNSSLMEKIESINSSLDD 1471
>SPAC27D7.02c |||GRIP domain protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 750
Score = 31.9 bits (69), Expect = 0.13
Identities = 40/167 (23%), Positives = 75/167 (44%), Gaps = 17/167 (10%)
Query: 134 ELEEQHQILVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQRTVAVFGSEGSNDYVH 193
+L+EQ + L ++ + T+ L ++ + L +L EL+R E +
Sbjct: 503 QLKEQEEDLQNKEEELTELRKLLREQTQDSQKLRLLVEQL-ELERQDLKQAGENHYSNLS 561
Query: 194 SN--KQIKSLDGSLQSAKNQALTATTGIEEVRNLLRQLDARTNE--------TISNVTAN 243
S+ QIKSL+ SL +++ + ++ I E+ + + +L + NE IS +N
Sbjct: 562 SDYETQIKSLESSLTNSQAECVSFQEKINELNSQIDELKLKLNEANKKYQELAISFENSN 621
Query: 244 QKANHELKDDVTSL------NKTIVAKVEALQTRIDEIQVSVVQVFD 284
K D+ SL N+T++ +E R + +Q S VF+
Sbjct: 622 VKTQSVEPDNGLSLEALKNENQTLLKNLEDSTARYEHLQKSFKNVFN 668
Score = 25.8 bits (54), Expect = 8.5
Identities = 16/46 (34%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 227 RQLDARTNETISNVTANQKANHELKDDVTSLNKTIVAKVEALQTRI 272
R L +RT + + + + +N +LKD++TSL +T V++ EA + R+
Sbjct: 429 RLLQSRT-QMQTELDSYITSNSQLKDEITSLKQT-VSESEAERKRL 472
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 31.5 bits (68), Expect = 0.17
Identities = 34/167 (20%), Positives = 79/167 (47%), Gaps = 19/167 (11%)
Query: 119 KELRGNTSVLSHKLAELEEQHQILVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQR 178
++L ++LSHK+ +L E+ Q L + T+ A S+KL+ + + RL++L
Sbjct: 408 RQLLEENALLSHKVLKLTEEIQDLETLNQLNTEIEARQSEKLN---EVQEETQRLSQL-- 462
Query: 179 TVAVFGSEGSNDYVHSNKQIKSLDGSLQSAKNQALTATTGIEEVRNLLRQLDARTNETIS 238
+ S+ + ++K L L ++ + L +E+ ++ +L N
Sbjct: 463 ---LISSQPALT------EVKHLKLCLSDSQEELLQLNAKLEKANIVIDEL----NSAKL 509
Query: 239 NVTANQKANHELKDDVTSLNKTIVAKVEALQTRID-EIQVSVVQVFD 284
++ + +KDD+T +N+ + ++E+ + ++ EI ++ F+
Sbjct: 510 KLSKQVEEESSMKDDLTEMNQRLKEQIESYENEVNSEITSRTLKEFE 556
>SPAC20G4.08 ||SPAC4F10.01|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1076
Score = 31.1 bits (67), Expect = 0.22
Identities = 16/46 (34%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 123 GNTSVLSHKLAELEEQHQILVSRVDAATQDLATLSKKLDGAPTLAD 168
GN SV+ ++L ++ Q+L+ VD AT + + +L GA +L+D
Sbjct: 303 GNDSVIKNRLMAIDTTGQVLIFAVDIAT-STSEIIFQLSGAQSLSD 347
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 30.7 bits (66), Expect = 0.30
Identities = 41/181 (22%), Positives = 73/181 (40%), Gaps = 15/181 (8%)
Query: 83 FVDVRRQIVSLRMEMDRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEEQHQIL 142
F D+ Q SL E D + + LQ LR TS L +++ L Q++
Sbjct: 423 FEDIMLQFRSLEEERDVLESK-------LQTLEDDNNSLRLMTSSLGNQIESLRTQNR-- 473
Query: 143 VSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQRTVAVFGSEGSNDYVHSNKQIKSLD 202
+D L L+ K + LA+T +RL E+ + + + SND + + +
Sbjct: 474 --EIDEEKNHLRLLASK-NSDKALAETNIRLQEVTKELETLRMKNSNDLNEIHDLREENE 530
Query: 203 GSLQSAKNQALTATTGIEEVRNLLRQLDARTNETISNVTANQKANHELKDDVTSLNKTIV 262
G + I E+ ++ + +E N T ++ N +LKD + N+ +
Sbjct: 531 GLTLKIDSITKEKDRLINELEQRIKSYEVNVSEL--NGTIDEYRN-KLKDKEETYNEVMN 587
Query: 263 A 263
A
Sbjct: 588 A 588
Score = 27.5 bits (58), Expect = 2.8
Identities = 34/149 (22%), Positives = 59/149 (39%), Gaps = 9/149 (6%)
Query: 98 DRVSTSSASVTDALQICHTAAKELRGNTSVLSHKLAELEEQHQILVSRVDAATQDLATLS 157
D++S +TD + +E R V KL+ +++ + A ++L
Sbjct: 663 DKISVLQRQLTDVKDELDVSEEE-REEAIVAGQKLSA---SFELMSNEKQALELKYSSLK 718
Query: 158 KKLDGAPTLADT-PMRLAELQRTVAVFGS--EGSNDYVHSNKQIKSLDGSLQSAKNQALT 214
+L A L D L+EL + + GSND + NK+I L+ L Q
Sbjct: 719 NELINAQNLLDRREEELSELSKKLFEERKIRSGSNDDIEKNKEINVLNSELADKLAQIRH 778
Query: 215 ATTGIEEVRNLLRQLDARTNETISNVTAN 243
+ E+ L+ L+ E +N+ N
Sbjct: 779 LESDKMELDKLVHHLNRGIEE--ANIEEN 805
>SPAC664.10 |klp2||kinesin-like protein Klp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 817
Score = 30.3 bits (65), Expect = 0.39
Identities = 29/143 (20%), Positives = 59/143 (41%), Gaps = 8/143 (5%)
Query: 120 ELRGNTSVLSHKLAELEEQHQILVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQRT 179
EL+ SHK+ EL ++++ +SR+ L L K +GA +L++
Sbjct: 299 ELQSAEEHFSHKIKELTSENELKISRLQEEKDSL--LKKVQEGASLAMQRVQNKHDLEKK 356
Query: 180 VAVFGSEGSNDYVHSNKQIKSLDGSLQSAKNQALTATTGIEEVRNLLRQLDARTNETISN 239
+ + +S KQ ++ + + + T E +++ L Q A + S
Sbjct: 357 RLQSAIQPLQEENNSLKQ------QIEQLQRELASETVVKENLKSSLDQQSANVQKLEST 410
Query: 240 VTANQKANHELKDDVTSLNKTIV 262
A + L++DV ++ I+
Sbjct: 411 NRALESTIKTLEEDVYTMKNKII 433
>SPBC1709.19c |||NifU-like protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 260
Score = 29.9 bits (64), Expect = 0.52
Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 1/72 (1%)
Query: 98 DRVSTSSASVTDALQICHTAAKELR-GNTSVLSHKLAELEEQHQILVSRVDAATQDLATL 156
++ T S + A + C ++A L+ G +L H + E+E Q+L + A +
Sbjct: 187 EKTGTVSLKLRGACRTCSSSAVTLKNGIQQMLKHYIPEVENVVQVLDPEEEVAIAEFEKF 246
Query: 157 SKKLDGAPTLAD 168
++++G AD
Sbjct: 247 EQRINGNKQKAD 258
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 29.5 bits (63), Expect = 0.69
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 4/59 (6%)
Query: 209 KNQALTATTGIEEVRNLLRQLDARTNETI---SNVTANQKANHELKDDVTSLNKTIVAK 264
KNQ +T T ++ NLL D R E I + N K L +D T L +TI+ K
Sbjct: 861 KNQVVTEYTNDTKLLNLLNNEDKRVEENIQLKDGLLINSKDQILLPND-TQLTRTIIKK 918
>SPAC3A12.15 |vps53||GARP complex subunit Vps53 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 756
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/77 (24%), Positives = 38/77 (49%), Gaps = 7/77 (9%)
Query: 220 EEVRNLLRQLDARTNETISNVTANQKANHELK-------DDVTSLNKTIVAKVEALQTRI 272
+++ +L L R E++ + AN+K + K DD+ S +++ ++ LQ+
Sbjct: 36 DDLGSLRLSLSERLQESVKKLDANKKTYEDAKLSMGEKMDDLNSSIVSLLQELSTLQSVA 95
Query: 273 DEIQVSVVQVFDMSLNL 289
+ Q S+VQ+ NL
Sbjct: 96 ENTQSSIVQMTSEIKNL 112
>SPAC458.02c |||mRNP complex |Schizosaccharomyces pombe|chr
1|||Manual
Length = 468
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/78 (26%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 203 GSLQSAKNQALTATTGIEEVRNLLRQLDARTNETISNVTANQKANHELKDDVTSLNKTIV 262
GSLQ KN L A ++ +RN + + I+ V A + + ++T++ KT+
Sbjct: 46 GSLQE-KNAELRAE--LDNIRNAQAAIRSSKQTLINKVKAQDELLKKKVKELTAMKKTVP 102
Query: 263 AKVEA-LQTRIDEIQVSV 279
K E L + ++Q +V
Sbjct: 103 FKSEVELDKHVKQLQAAV 120
>SPAC10F6.09c |psm3|smc3|mitotic cohesin complex subunit
Psm3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1194
Score = 28.3 bits (60), Expect = 1.6
Identities = 41/201 (20%), Positives = 85/201 (42%), Gaps = 10/201 (4%)
Query: 97 MDRVSTSSASVTDALQICHTAAKELRGN-TSVLSHKLAELEEQHQILVSRVDAATQDLAT 155
++R+ + +L++ ++ + T+++ K+A LE Q L +++ + +D ++
Sbjct: 267 IERIKAEITELNHSLELLRVEKQQNDEDYTNIMKSKVA-LELQSSQLSRQIEFSKKDESS 325
Query: 156 LSKKLDGAPT-LADTPMRLAELQRTVAVFGSEGS--NDYVHSNKQIKSLDGSLQSAKNQA 212
L + +++ L+E+ SE N + K K QS +Q
Sbjct: 326 KLNILSELESKISEKENELSEILPKYNAIVSEADDLNKRIMLLKNQKQSLLDKQSRTSQF 385
Query: 213 LTATTGIEEVRNLLRQLDARTNETISN----VTANQKANHELKDDVTSLNKTIVAKVEAL 268
T E +RN L Q++ N T N T + +ELK + S K I +E+
Sbjct: 386 TTKKERDEWIRNQLLQINRNINSTKENSDYLKTEYDEMENELKAKL-SRKKEIEISLESQ 444
Query: 269 QTRIDEIQVSVVQVFDMSLNL 289
R+ ++ ++ + + NL
Sbjct: 445 GDRMSQLLANITSINERKENL 465
>SPAC1556.01c |rad50|SPAP4C9.01c|DNA repair protein
Rad50|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1290
Score = 28.3 bits (60), Expect = 1.6
Identities = 21/116 (18%), Positives = 56/116 (48%), Gaps = 3/116 (2%)
Query: 159 KLDGAPTLADTPMRLAELQRTVAVFGSEGSNDYVHSNKQIKSLDGSLQSAKNQALTATTG 218
K + + LA+ M L V + + ++Y N+++ L ++ + A +
Sbjct: 534 KTNKSAILANQLMTLKSSFSEVMSYELKDDDNY---NEELDKLVEDVRKKLQEKEEAESS 590
Query: 219 IEEVRNLLRQLDARTNETISNVTANQKANHELKDDVTSLNKTIVAKVEALQTRIDE 274
+ VR L + + ++I+++T N+K + + +++++++AL++ I+E
Sbjct: 591 LRSVRERLEIRISLSVQSINDLTENKKIKTKTLKSYSGTFASMISEIKALESEIEE 646
>SPAC4A8.05c |myp2|myo3|myosin II heavy chain |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 2104
Score = 28.3 bits (60), Expect = 1.6
Identities = 26/112 (23%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 171 MRLAELQRTVAVFGSEGSNDYVHS-NKQIKSLDGSLQSAKNQALTATTGIEEVRNLLRQL 229
M++ EL TV + + + V S N+ +S + +KN +EE+ +
Sbjct: 1621 MKIKELTSTVNKYREQLA--MVQSLNEHAESSLSKAERSKNYLTGRLQEVEELARGFQTT 1678
Query: 230 DARTNETISNVTANQKANHELKDDVTSLNKTIVAKVEALQTRIDEIQVSVVQ 281
+A +++ QK L + ++ T++ + E L +IDE V VQ
Sbjct: 1679 NADLQNELADAVVKQKEYEVLYVEKSNDYNTLLLQKEKLMKQIDEFHVIRVQ 1730
>SPBC16E9.15 |||heat shock factor binding protein
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 75
Score = 27.9 bits (59), Expect = 2.1
Identities = 12/44 (27%), Positives = 23/44 (52%)
Query: 236 TISNVTANQKANHELKDDVTSLNKTIVAKVEALQTRIDEIQVSV 279
T + T K ++ D +L K K+E + TR+D+++ S+
Sbjct: 15 TSAITTLTDKLLEDISGDFETLQKQFSEKLETMSTRLDQLEESM 58
>SPCC188.12 |spn6|SPCC584.09|septin Spn6|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 380
Score = 27.5 bits (58), Expect = 2.8
Identities = 15/56 (26%), Positives = 30/56 (53%)
Query: 221 EVRNLLRQLDARTNETISNVTANQKANHELKDDVTSLNKTIVAKVEALQTRIDEIQ 276
E R + +++ TNET S A ++ E +D + S ++ AL+T+I+ ++
Sbjct: 316 EKRAIQQKITQMTNETESFFQAKEEKMIETRDALNSELSEYHERIRALETQIESLK 371
>SPAC1486.04c |alm1||medial ring protein Alm1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1727
Score = 27.5 bits (58), Expect = 2.8
Identities = 27/84 (32%), Positives = 43/84 (51%), Gaps = 10/84 (11%)
Query: 196 KQIKSLDGSLQSAKNQALTATTGIEEVRN----LLRQLDARTNETISNVTANQ---KANH 248
K+I L+ LQS+ NQA + I +RN L L+ + + T NQ +AN
Sbjct: 70 KKINFLEQQLQSSNNQAEESRNLISVLRNENESLKTNLENQNKRFDALTTENQSLRRANS 129
Query: 249 ELKDDVTSLNKTI-VAK--VEALQ 269
EL++ ++ + +AK +EALQ
Sbjct: 130 ELQEQSKIASEQLSIAKDQIEALQ 153
>SPAC630.13c |tsc2||tuberin|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1339
Score = 27.5 bits (58), Expect = 2.8
Identities = 19/83 (22%), Positives = 32/83 (38%)
Query: 127 VLSHKLAELEEQHQILVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQRTVAVFGSE 186
V + K + E+H + QD+A L +L L D +++ ++ V S
Sbjct: 86 VSTQKHLSIIERHTFFQTIEKDPFQDIAELQLRLKSLSVLTDEGHKISGIENRVGPLLSA 145
Query: 187 GSNDYVHSNKQIKSLDGSLQSAK 209
N Y+ Q L G +K
Sbjct: 146 WFNQYLQWQSQATELQGKDADSK 168
>SPBC582.06c |mcp6|hrs1, mug3|meiosis specific coiled-coil protein
Mcp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 327
Score = 27.1 bits (57), Expect = 3.7
Identities = 11/26 (42%), Positives = 16/26 (61%)
Query: 112 QICHTAAKELRGNTSVLSHKLAELEE 137
QIC T K L ++S +L++LEE
Sbjct: 268 QICQTLRKRLENDSSTTKQRLSKLEE 293
>SPAC16.04 |dus3||tRNA dihydrouridine synthase Dus3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 617
Score = 26.2 bits (55), Expect = 6.4
Identities = 15/66 (22%), Positives = 32/66 (48%)
Query: 222 VRNLLRQLDARTNETISNVTANQKANHELKDDVTSLNKTIVAKVEALQTRIDEIQVSVVQ 281
V+NL+ ++ TN + + + + K+ I +KV+++ RIDE+ ++
Sbjct: 392 VKNLIGRIFNETNTSAATLHGRSRQQRYSKNANWDYIGEIASKVKSMNERIDELPEDSLR 451
Query: 282 VFDMSL 287
+SL
Sbjct: 452 TQPLSL 457
>SPAC31A2.07c |dbp10||ATP-dependent RNA helicase Dbp10
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 848
Score = 26.2 bits (55), Expect = 6.4
Identities = 21/63 (33%), Positives = 28/63 (44%), Gaps = 1/63 (1%)
Query: 154 ATLSKKLDGAPTLADTPMRLAELQRTVAVFGSEGSNDYVHSNKQIKS-LDGSLQSAKNQA 212
A L++ L PT T + A L RT+ F G D V ++S + LQSA
Sbjct: 232 AQLTEILHALPTSRQTLLFSATLPRTLVDFAKAGLQDPVLVRLDVESKVSADLQSAFFSV 291
Query: 213 LTA 215
TA
Sbjct: 292 KTA 294
>SPAC328.06 |ubp2||ubiquitin C-terminal hydrolase
Ubp2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1141
Score = 25.8 bits (54), Expect = 8.5
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 112 QICHTAAKELRGNTSVLSHKLAELEEQHQILVSRVD 147
Q + A++ +R N + SH + +L E+ Q L +D
Sbjct: 855 QTLNDASQGVRSNYEIFSHLIVDLFEEKQTLYDALD 890
>SPAC29A4.11 |rga3||GTPase activating protein
Rga3|Schizosaccharomyces pombe|chr 1|||Manual
Length = 969
Score = 25.8 bits (54), Expect = 8.5
Identities = 14/37 (37%), Positives = 18/37 (48%)
Query: 184 GSEGSNDYVHSNKQIKSLDGSLQSAKNQALTATTGIE 220
G ND SN S D L SAKN++ ++ T E
Sbjct: 203 GGNVPNDGQDSNLASNSADSLLPSAKNRSFSSFTSFE 239
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.315 0.129 0.353
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,061,227
Number of Sequences: 5004
Number of extensions: 34348
Number of successful extensions: 209
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 179
Number of HSP's gapped (non-prelim): 47
length of query: 328
length of database: 2,362,478
effective HSP length: 73
effective length of query: 255
effective length of database: 1,997,186
effective search space: 509282430
effective search space used: 509282430
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 54 (25.8 bits)
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