GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001944-TA|BGIBMGA001944-PA|IPR007813|Fimbrial assembly
         (328 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.    36   0.002
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            27   0.95 
AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 prote...    26   1.3  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    24   5.1  
AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative deoxynucl...    23   8.9  
AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate deo...    23   8.9  

>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
          Length = 1187

 Score = 35.5 bits (78), Expect = 0.002
 Identities = 36/157 (22%), Positives = 70/157 (44%), Gaps = 11/157 (7%)

Query: 129 SHKLAELEEQHQILVSRVDAATQDLATLSKKLDGAPTLADTPMRLAELQRTVAVFGSEGS 188
           +H+  +L+EQH +L   ++   Q LA  S +      + +   ++  LQ+T+     E  
Sbjct: 707 AHRFGQLKEQHDMLNYELNNLKQRLAQTSFQ-QTKEEIEELNKKIETLQKTIV----EAR 761

Query: 189 NDYVHSNKQIKSLDGSLQSAKNQALTATTGIEEVRNLLRQLDARTNETISNVTANQKANH 248
                 + ++K L   +   K          EE    L++   ++ E+  N   +++   
Sbjct: 762 ETQTQCSAKVKDLQAKIADGKGHRERELKSAEED---LKRSKKKSEESRKNWKKHEQDFE 818

Query: 249 ELKDDVTSLNKTIV-AKVEA--LQTRIDEIQVSVVQV 282
            LK ++  L K IV AK +A  L+ +I  +Q  +V+V
Sbjct: 819 TLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEV 855



 Score = 31.5 bits (68), Expect = 0.034
 Identities = 22/93 (23%), Positives = 47/93 (50%), Gaps = 3/93 (3%)

Query: 190 DYVHSNKQIKSLDGSLQSAKNQALTATTGIEEVRNLLRQLDARTNETISNVTANQKANHE 249
           D+     +I+ L   + +AK QA+     I  ++  L ++   T+E  + VTA ++   +
Sbjct: 816 DFETLKLEIEELQKGIVTAKEQAVKLEEQIAALQQRLVEVSGTTDEMTAAVTALKQQIKQ 875

Query: 250 LKDDVTSLNKTIVAKV---EALQTRIDEIQVSV 279
            K+ + S +K + AK    + L  + DE+++ +
Sbjct: 876 HKEKMNSQSKELKAKYHQRDKLLKQNDELKLEI 908


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 26.6 bits (56), Expect = 0.95
 Identities = 16/75 (21%), Positives = 38/75 (50%), Gaps = 6/75 (8%)

Query: 192  VHSNKQIKSLDGSLQSAKNQALTATTGIEEVRNLLRQLDARTNETISNVTANQKANHELK 251
            V +NK +  L  S++   N +LT     E+ +   +Q+DA            ++ + +  
Sbjct: 977  VQNNKYVLKLK-SMKGPLNNSLT-----EQKQKSYKQIDASGEAVEKKAQYKKEVDEKFA 1030

Query: 252  DDVTSLNKTIVAKVE 266
            ++V ++++T+V+K +
Sbjct: 1031 EEVDNISQTVVSKAQ 1045


>AF458073-1|AAL68639.1|  166|Anopheles gambiae D7-related 5 protein
           protein.
          Length = 166

 Score = 26.2 bits (55), Expect = 1.3
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 97  MDRVSTSSASVTDALQICHTAAKELRG 123
           +D V T     TDA+ +C + AK+L G
Sbjct: 81  LDAVETHDGVYTDAVDVCLSKAKKLPG 107


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 24.2 bits (50), Expect = 5.1
 Identities = 10/34 (29%), Positives = 22/34 (64%)

Query: 194 SNKQIKSLDGSLQSAKNQALTATTGIEEVRNLLR 227
           + KQ++ LDG  +S+ ++ L  T  I++ ++ L+
Sbjct: 235 TRKQLEELDGQRKSSGDKQLLLTQEIQKAQDRLK 268


>AJ439060-5|CAD27756.1|  245|Anopheles gambiae putative
           deoxynucleoside kinase protein.
          Length = 245

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 13/31 (41%), Positives = 14/31 (45%)

Query: 122 RGNTSVLSHKLAELEEQHQILVSRVDAATQD 152
           R  TS+L   L E   QH IL S    A  D
Sbjct: 214 RSETSILKPILIENTNQHAILTSPAKRAKTD 244


>AF488801-1|AAO49462.1|  246|Anopheles gambiae multisubstrate
           deoxyribonucleoside kinaseprotein.
          Length = 246

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 13/31 (41%), Positives = 14/31 (45%)

Query: 122 RGNTSVLSHKLAELEEQHQILVSRVDAATQD 152
           R  TS+L   L E   QH IL S    A  D
Sbjct: 215 RSETSILKPILIENTNQHAILTSPAKRAKTD 245


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.315    0.129    0.353 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 238,362
Number of Sequences: 2123
Number of extensions: 7709
Number of successful extensions: 22
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 15
Number of HSP's gapped (non-prelim): 8
length of query: 328
length of database: 516,269
effective HSP length: 64
effective length of query: 264
effective length of database: 380,397
effective search space: 100424808
effective search space used: 100424808
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 48 (23.4 bits)