Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001943-TA|BGIBMGA001943-PA|IPR003348|Anion-transporting
ATPase
         (335 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like prote...    23   2.4  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   3.1  
AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochr...    21   9.6  

>AJ969955-1|CAI94742.1|  160|Tribolium castaneum torso-like
          protein protein.
          Length = 160

 Score = 23.4 bits (48), Expect = 2.4
 Identities = 10/36 (27%), Positives = 20/36 (55%)

Query: 41 CSLAVQLSKVRESVLIISTDPAHNISDAFDQKFSKV 76
          C + V+L++ R+SV +       N+ D   ++F K+
Sbjct: 40 CYVLVRLARFRDSVKLSKIPNNVNLMDVVAREFDKI 75


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 12/40 (30%), Positives = 18/40 (45%)

Query: 206 SNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLSLYET 245
           S K  E+L + +QVNA         F  +  + FL +  T
Sbjct: 303 SKKRRELLRLAQQVNANIAQITAANFFDISRSTFLGILAT 342


>AF264721-1|AAF75273.1|  126|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q2 protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 9.6
 Identities = 9/24 (37%), Positives = 13/24 (54%)

Query: 277 LCAARHKVQEKYLEQIADLYEDFH 300
           L A    VQE  L+++ D+  D H
Sbjct: 11  LIACHKDVQETILQEMRDVLGDIH 34


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.135    0.386 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,074
Number of Sequences: 317
Number of extensions: 2493
Number of successful extensions: 4
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 1
Number of HSP's gapped (non-prelim): 3
length of query: 335
length of database: 114,650
effective HSP length: 57
effective length of query: 278
effective length of database: 96,581
effective search space: 26849518
effective search space used: 26849518
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 43 (21.4 bits)