Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001943-TA|BGIBMGA001943-PA|IPR003348|Anion-transporting
ATPase
(335 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1142.06 |get3||GET complex ATPase subunit Get3 |Schizosaccha... 374 e-105
SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces ... 31 0.17
SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein Ndc80|... 28 1.6
SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated protei... 28 1.6
SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr 1... 28 2.2
SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr 3||... 27 3.8
SPBC418.02 |||NatA N-acetyltransferase complex subunit |Schizosa... 27 5.0
SPBC17D11.05 |tif32||translation initiation factor eIF3a|Schizos... 26 6.6
SPBC30D10.02 |||transcription corepressor |Schizosaccharomyces p... 26 6.6
SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces pombe... 26 8.7
SPCC63.08c |ppk36|atg1|serine/threonine protein kinase Ppk36|Sch... 26 8.7
SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78 |Schizosacch... 26 8.7
>SPAC1142.06 |get3||GET complex ATPase subunit Get3
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 329
Score = 374 bits (921), Expect = e-105
Identities = 180/327 (55%), Positives = 233/327 (71%), Gaps = 3/327 (0%)
Query: 7 FEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNIS 66
F+PL +L+N+++Q SL+WIF SCSLA+Q+SKVR SVL+ISTDPAHN+S
Sbjct: 3 FDPLPGTLENLLEQTSLKWIFVGGKGGVGKTTTSCSLAIQMSKVRSSVLLISTDPAHNLS 62
Query: 67 DAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAF 126
DAF KF K KV GFDNL AMEIDPN+ + E+ E+ + G+MQ++
Sbjct: 63 DAFGTKFGKDARKVPGFDNLSAMEIDPNLSIQEMTEQ--ADQQNPNNPLSGMMQDLAFTI 120
Query: 127 PGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAP 186
PGIDEA+++AE++K +K M F V+FDTAPTGHTLR L+FP V+E+ LGKL L S+ P
Sbjct: 121 PGIDEALAFAEILKQIKSMEFDCVIFDTAPTGHTLRFLNFPTVLEKALGKLGGLSSRFGP 180
Query: 187 FINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLSLYETE 246
INQ+ S+ G+ D+F KM+ M + I +VN QFK+P+ TTFVCVCI+EFLSLYETE
Sbjct: 181 MINQMGSIMGVNANEQDLFG-KMESMRANISEVNKQFKNPDLTTFVCVCISEFLSLYETE 239
Query: 247 RLVQELTRCGIDTHNIIVNQLLLRSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPL 306
R++QELT IDTHNI+VNQLLL + C C AR K+Q+KYL QI +LYEDFHV K+P
Sbjct: 240 RMIQELTSYEIDTHNIVVNQLLLDPNTTCPQCMARRKMQQKYLAQIEELYEDFHVVKVPQ 299
Query: 307 LEKEVRGASAVNAFSELLLKPYDPPTS 333
+ EVRG A+ +FSE+L+KPY PTS
Sbjct: 300 VPAEVRGTEALKSFSEMLVKPYVYPTS 326
>SPBC21C3.11 |ubx4||UBX domain protein Ubx4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 425
Score = 31.5 bits (68), Expect = 0.17
Identities = 36/205 (17%), Positives = 73/205 (35%), Gaps = 6/205 (2%)
Query: 62 AHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQE 121
AH + + +P+ + NL + + T +E EG E + ++
Sbjct: 215 AHKLLEPLPTPIPSLPSTPSSYQNLPSQSLTGESLPTVSNQEKDEGVIEKVAVNNTPSVS 274
Query: 122 IVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKL---- 177
FP S +K K N + +D PT L L + ++ + ++
Sbjct: 275 SKSPFPKKKSFSSMLAQVKKEKAENNGSDGYDLQPTKSQLEL--YQSILRKRANQVSSTS 332
Query: 178 MRLKSKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIA 237
+ S P + F + S + D+ + +R A P ++T + +
Sbjct: 333 LTKSSSPKPLPSSAIVKFDFGNGKSIVHEFSKDDNIETLRAFVASHLSPEESTSFQLTFS 392
Query: 238 EFLSLYETERLVQELTRCGIDTHNI 262
+ +L T +V+ + R + H I
Sbjct: 393 NYEALPTTGLIVEHIGRAVVRVHTI 417
>SPBC11C11.03 |ndc80|ndc10, tid3|spindle pole body protein
Ndc80|Schizosaccharomyces pombe|chr 2|||Manual
Length = 624
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/46 (30%), Positives = 23/46 (50%)
Query: 180 LKSKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKD 225
LK+KV PFIN++ L S K+ E + + + A+ +D
Sbjct: 458 LKNKVRPFINEVRRSITLEFHEEQNKSLKLQEHVDTVNDLIAELQD 503
>SPAC3G9.12 |peg1|cls1|CLASP family microtubule-associated
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1462
Score = 28.3 bits (60), Expect = 1.6
Identities = 14/61 (22%), Positives = 28/61 (45%), Gaps = 2/61 (3%)
Query: 109 SEAMRLDKGVMQEIVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQ 168
++A+ + ++ + +D Y ++ L+ F V+D + GH+ L SFP
Sbjct: 641 TDALYSGSSICYSLIFSHSLLDLTFQYVDIASLLS--QFLLCVYDPSNVGHSFALASFPY 698
Query: 169 V 169
V
Sbjct: 699 V 699
>SPAP27G11.14c |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 689
Score = 27.9 bits (59), Expect = 2.2
Identities = 29/96 (30%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 238 EFLSLYETERLVQELTRCGIDTHNIIVNQLLLRSSAPCELCAARHKVQEKYLEQIADLY- 296
E +++ ET++ + TR I T +I N+L+ S + EK + Q DLY
Sbjct: 335 ETINVEETKKETYKFTR-SIKT--VIPNKLISNES----ISILSIPESEKTIYQNFDLYV 387
Query: 297 EDFHVTKLPLLEKEVRGASAVNAFSELLLKPYDPPT 332
F+V + L EKE+ S ++F+ LL PT
Sbjct: 388 SKFNVARKELSEKELFNNSFSSSFNTLLASLLVKPT 423
>SPCC1672.11c |||P-type ATPase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 1315
Score = 27.1 bits (57), Expect = 3.8
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 170 VERGLGKLMRLKSKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQF 223
+E G+L +L ++ P+ N ++S+FG + + + D + R VN ++
Sbjct: 211 IETQWGELSKLDIQIQPYENSLSSIFGASIRVAAPEGTENDPFIENFRYVNYRY 264
>SPBC418.02 |||NatA N-acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 695
Score = 26.6 bits (56), Expect = 5.0
Identities = 19/61 (31%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 187 FINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTF--VCVCIAEF-LSLY 243
FI SL + +D FS K+ MLS R+ ++ P + C+C+A + L Y
Sbjct: 322 FIPSFISLLKIPLKTNDAFSKKLITMLSNFREGDSAKNIPTHKLWCTYCLCLAHYKLGDY 381
Query: 244 E 244
E
Sbjct: 382 E 382
>SPBC17D11.05 |tif32||translation initiation factor
eIF3a|Schizosaccharomyces pombe|chr 2|||Manual
Length = 932
Score = 26.2 bits (55), Expect = 6.6
Identities = 20/99 (20%), Positives = 44/99 (44%), Gaps = 3/99 (3%)
Query: 151 VFDTAPTGHTLRLLSFPQVVERGLGKLMRL---KSKVAPFINQIASLFGLADFNSDMFSN 207
V+D+ + + L +F + + G++ + +K F ++ + F+SD+FSN
Sbjct: 435 VYDSISLKYVMDLATFEEPYDFNPGQIEKFIMNGNKKGAFSIRLNHIENSISFSSDLFSN 494
Query: 208 KMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLSLYETE 246
+ SV Q +Q T + ++ L ++T+
Sbjct: 495 PIKSSDSVSLQSTPSELITSQLTRIAKSLSSVLMRFDTD 533
>SPBC30D10.02 |||transcription corepressor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 161
Score = 26.2 bits (55), Expect = 6.6
Identities = 29/120 (24%), Positives = 52/120 (43%), Gaps = 6/120 (5%)
Query: 196 GLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLSLYETE--RLVQELT 253
G AD + + +M+S I V+ F + + C+ EF+ L +E + ++
Sbjct: 4 GFADDELSLPKATVQKMVSDILPVDLTFTKEARDLLIECCV-EFIHLVSSEANEICEKEA 62
Query: 254 RCGIDTHNIIV---NQLLLRSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKE 310
+ I +II N A AA HK Q+K E+ + +E V++ LL ++
Sbjct: 63 KKTIAAEHIIKALENLEFKEYIAEALEVAAEHKEQQKNREKKSSKFEQSGVSRDELLRQQ 122
>SPCC18B5.07c |nup61||nucleoporin Nup61|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 565
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 281 RHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRGASAVNAFSELLLKPYDPPTSST 335
RH E E AD+ + K ++ G S+ F+ L KP P S+T
Sbjct: 21 RHGPVEVPKEASADVMATRKIAKPKSRKRPTSGVSSPGIFANLAAKPVSLPASTT 75
>SPCC63.08c |ppk36|atg1|serine/threonine protein kinase
Ppk36|Schizosaccharomyces pombe|chr 3|||Manual
Length = 830
Score = 25.8 bits (54), Expect = 8.7
Identities = 16/54 (29%), Positives = 25/54 (46%)
Query: 57 ISTDPAHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESE 110
I++ P + AF+Q + VP G N A+E NV L E +G ++
Sbjct: 512 IASTPVTQLRRAFEQATAHVPQSGGGARNKSALERALNVANARLNEVVVDGMTD 565
>SPBC4F6.17c |||mitochondrial matrix chaperone Hsp78
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 803
Score = 25.8 bits (54), Expect = 8.7
Identities = 25/130 (19%), Positives = 55/130 (42%), Gaps = 11/130 (8%)
Query: 100 LPEEYFEGESEAMRLDKGVMQE------IVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFD 153
L E F+ + +R D QE ++G+ PG E+ + V+ ++ ++FD
Sbjct: 552 LAEFLFDTDKAMIRFDMSEFQEKHTIARLIGSPPGYIGYEESGELTEAVRRKPYAVLLFD 611
Query: 154 TAPTGHTLRLLSFPQVVERGL-----GKLMRLKSKVAPFINQIASLFGLADFNSDMFSNK 208
H QV++ G G+ + +S + + + S +AD ++ +
Sbjct: 612 ELEKAHHDITNLLLQVLDEGFLTDSQGRKVDFRSTLIVMTSNLGSDILVADPSTTVTPKS 671
Query: 209 MDEMLSVIRQ 218
D ++ V+++
Sbjct: 672 RDAVMDVVQK 681
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.135 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,443,353
Number of Sequences: 5004
Number of extensions: 56022
Number of successful extensions: 162
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 155
Number of HSP's gapped (non-prelim): 13
length of query: 335
length of database: 2,362,478
effective HSP length: 73
effective length of query: 262
effective length of database: 1,997,186
effective search space: 523262732
effective search space used: 523262732
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 54 (25.8 bits)
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