Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001943-TA|BGIBMGA001943-PA|IPR003348|Anion-transporting
ATPase
(335 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_05_0014 - 20071514-20071690,20071779-20071894,20072177-200723... 330 9e-91
02_05_0729 - 31271566-31271730,31271799-31271933,31272210-312722... 97 1e-20
11_02_0149 - 8801675-8804332 33 0.43
06_03_0688 - 23525513-23525958,23527920-23529861,23529960-23530070 31 1.3
02_05_0571 - 30072521-30072595,30072681-30072749,30072826-300729... 31 1.3
05_01_0503 - 4196989-4197425,4197507-4199436,4200910-4201017 29 4.0
06_02_0051 - 10957857-10958127,10959791-10960035,10960160-109602... 29 5.3
02_03_0082 - 15021751-15022330,15022397-15022626 29 5.3
05_06_0104 - 25603568-25603867,25603965-25604162,25604247-256045... 29 7.0
>09_05_0014 -
20071514-20071690,20071779-20071894,20072177-20072315,
20072649-20072672,20072879-20072989,20073089-20073239,
20073357-20073478,20074287-20074556
Length = 369
Score = 330 bits (811), Expect = 9e-91
Identities = 168/328 (51%), Positives = 221/328 (67%), Gaps = 20/328 (6%)
Query: 11 EPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNISDAFD 70
+P+++N+++Q+SL+W+F CS L++ L+ R+SVL+ISTDPAHN+SDAF
Sbjct: 12 DPTVRNLLEQESLKWVFVGGKGGVGKTTCSSILSILLASARQSVLVISTDPAHNLSDAFQ 71
Query: 71 QKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGID 130
Q+F+K PT V+GF+NL+AMEIDP V + E EG + E+ A PG+D
Sbjct: 72 QRFTKFPTLVRGFNNLYAMEIDPKVENDDFANEGMEG----------FLSELTNAIPGVD 121
Query: 131 EAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVAPFINQ 190
EAMS+AE++KLV+ M++S VVFDTAPTGHTLRLL FP +E+GL K+M LK+K +NQ
Sbjct: 122 EAMSFAEMLKLVQTMDYSVVVFDTAPTGHTLRLLQFPATLEKGLEKMMALKNKFGGLLNQ 181
Query: 191 IASLFGLAD-FNSDMFSNKMDEMLSVIRQVNAQFKDP--------NQTTFVCVCIAEFLS 241
LFGL D N D +++ M VI QVN QFKDP + TTFVCVCI EFLS
Sbjct: 182 ATRLFGLGDELNEDAMLGRLEGMKDVIEQVNRQFKDPIWSNLLEKDLTTFVCVCIPEFLS 241
Query: 242 LYETERLVQELTRCGIDTHNIIVNQLLLRSSA-PCELCAARHKVQEKYLEQIADLYEDFH 300
LYETERLVQEL + ID HNII+NQ+L A +L AR K+Q+KY++Q LY+DF+
Sbjct: 242 LYETERLVQELAKFEIDAHNIIINQVLFDEEAVESKLLKARIKMQQKYIDQFHMLYDDFN 301
Query: 301 VTKLPLLEKEVRGASAVNAFSELLLKPY 328
+TKLPLL +EV G A+ FS L PY
Sbjct: 302 ITKLPLLPEEVCGVQALQNFSRHFLTPY 329
>02_05_0729 -
31271566-31271730,31271799-31271933,31272210-31272284,
31273003-31273068,31273154-31273222,31273303-31273377,
31273518-31273628,31273947-31274009,31274064-31274453
Length = 382
Score = 97.5 bits (232), Expect = 1e-20
Identities = 64/191 (33%), Positives = 103/191 (53%), Gaps = 33/191 (17%)
Query: 39 CSCSLAVQLSKVRESVLIISTDPAHNISDAFDQKFSKVPTKVKGFDN------------- 85
C+ SLAV+ + L++STDPAH++SD+F Q S V + F++
Sbjct: 85 CAASLAVRFANNGHPTLVVSTDPAHSLSDSFAQVASPVEHLLSRFEDLSGGALVPVEGPE 144
Query: 86 --LFAMEIDPNVGLTELPEEYFEGESEAMR-----LDKGVMQEIVGAF----------PG 128
LFA+EI+P E + ++ + GV+ E +G PG
Sbjct: 145 APLFALEINPEKAREEFRAASQKNGGTGVKDFMDGMGLGVLAEQLGELKLGELLDTPPPG 204
Query: 129 IDEAMSYAEVMKLVKGMNFS---AVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+DEA++ ++VM+ ++ +S +VFDTAPTGHTLRLLS P ++ +GK+++L+SK+A
Sbjct: 205 LDEAIAISKVMQFLEAQEYSMFRRIVFDTAPTGHTLRLLSLPDFLDASIGKILKLRSKIA 264
Query: 186 PFINQIASLFG 196
+ I S+FG
Sbjct: 265 SATSAIKSVFG 275
>11_02_0149 - 8801675-8804332
Length = 885
Score = 32.7 bits (71), Expect = 0.43
Identities = 19/84 (22%), Positives = 39/84 (46%), Gaps = 1/84 (1%)
Query: 39 CSCSLAVQLSKVRESVLIISTDPAHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLT 98
CS V +K +E L + T ++ ++K +P ++G +NL +EI +
Sbjct: 781 CSNKEIVSFTKEQEKALELITS-LQDLCFFHNEKLQSLPADLRGLNNLRILEILRCSAIR 839
Query: 99 ELPEEYFEGESEAMRLDKGVMQEI 122
LP+ F + + +D+ +E+
Sbjct: 840 SLPKNAFPNSLQKINVDRRCSEEL 863
>06_03_0688 - 23525513-23525958,23527920-23529861,23529960-23530070
Length = 832
Score = 31.1 bits (67), Expect = 1.3
Identities = 21/61 (34%), Positives = 27/61 (44%), Gaps = 1/61 (1%)
Query: 100 LPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAMSYAEVMKLVKGMNFSA-VVFDTAPTG 158
+ +YF G S R D GV E V A I +S + K+ G F+ VV P G
Sbjct: 536 IENQYFIGSSYGWRPDDGVRPEDVEAVNLIPRELSLKIMSKIAAGERFTVYVVVPMWPEG 595
Query: 159 H 159
H
Sbjct: 596 H 596
>02_05_0571 -
30072521-30072595,30072681-30072749,30072826-30072900,
30072981-30073050,30073168-30073279,30073576-30073674,
30073847-30073939,30074994-30075062,30076845-30076911
Length = 242
Score = 31.1 bits (67), Expect = 1.3
Identities = 13/37 (35%), Positives = 22/37 (59%)
Query: 40 SCSLAVQLSKVRESVLIISTDPAHNISDAFDQKFSKV 76
+C +A L ++ E + I+S DP I ++FD+ F V
Sbjct: 120 NCEVAELLQEIHEHMAILSEDPKIKIPESFDKAFQYV 156
>05_01_0503 - 4196989-4197425,4197507-4199436,4200910-4201017
Length = 824
Score = 29.5 bits (63), Expect = 4.0
Identities = 17/52 (32%), Positives = 25/52 (48%)
Query: 100 LPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAMSYAEVMKLVKGMNFSAVV 151
+ +YF G S + + GV E VGA I + +S V K+ G F+ V
Sbjct: 531 IENQYFLGSSYCWKPNDGVKPEDVGALHLIPKELSMKVVSKIEAGERFTVYV 582
>06_02_0051 -
10957857-10958127,10959791-10960035,10960160-10960229,
10960319-10960986
Length = 417
Score = 29.1 bits (62), Expect = 5.3
Identities = 18/64 (28%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 41 CSLAVQLSKVRESVLIISTDPA--HNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLT 98
C++A++L++ +++++ DPA IS + +V TK FD A D + L
Sbjct: 72 CAMALELARRGLNLVLVGRDPARLREISGTIRSRHGRVQTKAVVFDLSLASTPDGDQPLR 131
Query: 99 ELPE 102
L E
Sbjct: 132 RLRE 135
>02_03_0082 - 15021751-15022330,15022397-15022626
Length = 269
Score = 29.1 bits (62), Expect = 5.3
Identities = 15/44 (34%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 102 EEYFEGESEAMRLDKGVMQEIVGAFPGIDEAMSYAEVMKLVKGM 145
+E E E A +LDK + +PG DE ++ +++KLVK +
Sbjct: 49 KEDCESEKGAHKLDKMLEDHRTSLYPGCDE-KAFGDLLKLVKNI 91
>05_06_0104 -
25603568-25603867,25603965-25604162,25604247-25604526,
25604615-25605419,25605518-25606673
Length = 912
Score = 28.7 bits (61), Expect = 7.0
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 95 VGLTELP----EEYFEGESEAMRLDKGVMQE------IVGAFPGIDEAMSYAEVMKLVKG 144
VG TEL E+ F+ E+ +R+D E ++GA PG ++ + V+
Sbjct: 611 VGKTELAKALAEQLFDDENLLVRIDMSEYMEQHSVARLIGAPPGYVGHEEGGQLTEQVRR 670
Query: 145 MNFSAVVFDTAPTGHTLRLLSFPQVVERG 173
+S ++FD H + QV++ G
Sbjct: 671 RPYSVILFDEVEKAHVAVFNTLLQVLDDG 699
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.135 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,598,258
Number of Sequences: 37544
Number of extensions: 315348
Number of successful extensions: 809
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 4
Number of HSP's that attempted gapping in prelim test: 796
Number of HSP's gapped (non-prelim): 10
length of query: 335
length of database: 14,793,348
effective HSP length: 82
effective length of query: 253
effective length of database: 11,714,740
effective search space: 2963829220
effective search space used: 2963829220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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