Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001943-TA|BGIBMGA001943-PA|IPR003348|Anion-transporting
ATPase
(335 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC002651-1|AAH02651.1| 348|Homo sapiens arsA arsenite transport... 493 e-139
AY304483-1|AAP45050.1| 348|Homo sapiens arsA arsenite transport... 493 e-139
AF047469-1|AAC03551.1| 348|Homo sapiens arsenite translocating ... 492 e-139
AK223363-1|BAD97083.1| 348|Homo sapiens arsA arsenite transport... 490 e-138
U60276-1|AAC50731.1| 332|Homo sapiens hASNA-I protein. 486 e-137
M59807-1|AAA36367.2| 234|Homo sapiens NK4 protein. 31 4.3
BC105602-1|AAI05603.1| 188|Homo sapiens interleukin 32 protein. 31 4.3
BC018782-1|AAH18782.1| 188|Homo sapiens interleukin 32 protein. 31 4.3
BC009401-1|AAH09401.1| 234|Homo sapiens IL32 protein protein. 31 4.3
AY495334-3|AAS80148.1| 178|Homo sapiens tumor necrosis factor a... 31 4.3
AY495334-2|AAS80146.1| 131|Homo sapiens tumor necrosis factor a... 31 4.3
AY495334-1|AAS80147.1| 188|Homo sapiens tumor necrosis factor a... 31 4.3
AY495333-1|AAS80145.1| 178|Homo sapiens tumor necrosis factor a... 31 4.3
AY495332-1|AAS80144.1| 188|Homo sapiens tumor necrosis factor a... 31 4.3
AY495331-1|AAS80143.1| 131|Homo sapiens tumor necrosis factor a... 31 4.3
U41221-1|AAA82080.1| 887|Homo sapiens hMSH2 protein. 31 5.7
U04045-1|AAA61870.1| 934|Homo sapiens hMSH2 protein. 31 5.7
U03911-1|AAA18643.1| 934|Homo sapiens hMSH2 protein. 31 5.7
L47583-1|AAB59564.1| 934|Homo sapiens DNA mismatch repair prote... 31 5.7
L47582-1|AAB59565.1| 934|Homo sapiens DNA mismatch repair prote... 31 5.7
L47581-1|AAA76858.1| 934|Homo sapiens DNA mismatch repair prote... 31 5.7
L47580-1|AAB59572.1| 810|Homo sapiens MSH2 protein. 31 5.7
BC104956-1|AAI04957.1| 1700|Homo sapiens SKIP protein protein. 31 5.7
BC104954-1|AAI04955.1| 1700|Homo sapiens SKIP protein protein. 31 5.7
BC021566-1|AAH21566.1| 934|Homo sapiens mutS homolog 2, colon c... 31 5.7
AY601851-1|AAS99351.1| 934|Homo sapiens mutS homolog 2, colon c... 31 5.7
AK222860-1|BAD96580.1| 878|Homo sapiens mutS homolog 2 variant ... 31 5.7
>BC002651-1|AAH02651.1| 348|Homo sapiens arsA arsenite transporter,
ATP-binding, homolog 1 (bacterial) protein.
Length = 348
Score = 493 bits (1215), Expect = e-139
Identities = 227/333 (68%), Positives = 275/333 (82%), Gaps = 2/333 (0%)
Query: 2 EDTKDFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDP 61
ED D EPLEP+L N+I+Q+SL+WIF CSCSLAVQLSK RESVLIISTDP
Sbjct: 16 EDAPDVEPLEPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKGRESVLIISTDP 75
Query: 62 AHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQE 121
AHNISDAFDQKFSKVPTKVKG+DNLFAMEIDP++G+ ELP+E+FE E + + K +MQE
Sbjct: 76 AHNISDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVAELPDEFFE-EDNMLSMGKKMMQE 134
Query: 122 IVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLK 181
+ AFPGIDEAMSYAEVM+LVKGMNFS VVFDTAPTGHTLRLL+FP +VERGLG+LM++K
Sbjct: 135 AMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIK 194
Query: 182 SKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLS 241
++++PFI+Q+ ++ GL D N+D ++K++E L VIR V+ QFKDP QTTF+CVCIAEFLS
Sbjct: 195 NQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLS 254
Query: 242 LYETERLVQELTRCGIDTHNIIVNQLLLRS-SAPCELCAARHKVQEKYLEQIADLYEDFH 300
LYETERL+QEL +C IDTHNIIVNQL+ PC++C ARHK+Q KYL+Q+ DLYEDFH
Sbjct: 255 LYETERLIQELAKCKIDTHNIIVNQLVFPDPEKPCKMCEARHKIQAKYLDQMEDLYEDFH 314
Query: 301 VTKLPLLEKEVRGASAVNAFSELLLKPYDPPTS 333
+ KLPLL EVRGA VN FS LLL+PY PP++
Sbjct: 315 IVKLPLLPHEVRGADKVNTFSALLLEPYKPPSA 347
>AY304483-1|AAP45050.1| 348|Homo sapiens arsA arsenite transporter,
ATP-binding, homolog 1 (bacterial) protein.
Length = 348
Score = 493 bits (1215), Expect = e-139
Identities = 227/333 (68%), Positives = 275/333 (82%), Gaps = 2/333 (0%)
Query: 2 EDTKDFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDP 61
ED D EPLEP+L N+I+Q+SL+WIF CSCSLAVQLSK RESVLIISTDP
Sbjct: 16 EDAPDVEPLEPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKGRESVLIISTDP 75
Query: 62 AHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQE 121
AHNISDAFDQKFSKVPTKVKG+DNLFAMEIDP++G+ ELP+E+FE E + + K +MQE
Sbjct: 76 AHNISDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVAELPDEFFE-EDNMLSMGKKMMQE 134
Query: 122 IVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLK 181
+ AFPGIDEAMSYAEVM+LVKGMNFS VVFDTAPTGHTLRLL+FP +VERGLG+LM++K
Sbjct: 135 AMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIK 194
Query: 182 SKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLS 241
++++PFI+Q+ ++ GL D N+D ++K++E L VIR V+ QFKDP QTTF+CVCIAEFLS
Sbjct: 195 NQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLS 254
Query: 242 LYETERLVQELTRCGIDTHNIIVNQLLLRS-SAPCELCAARHKVQEKYLEQIADLYEDFH 300
LYETERL+QEL +C IDTHNIIVNQL+ PC++C ARHK+Q KYL+Q+ DLYEDFH
Sbjct: 255 LYETERLIQELAKCKIDTHNIIVNQLVFPDPEKPCKMCEARHKIQAKYLDQMEDLYEDFH 314
Query: 301 VTKLPLLEKEVRGASAVNAFSELLLKPYDPPTS 333
+ KLPLL EVRGA VN FS LLL+PY PP++
Sbjct: 315 IVKLPLLPHEVRGADKVNTFSALLLEPYKPPSA 347
>AF047469-1|AAC03551.1| 348|Homo sapiens arsenite translocating
ATPase protein.
Length = 348
Score = 492 bits (1213), Expect = e-139
Identities = 227/333 (68%), Positives = 275/333 (82%), Gaps = 2/333 (0%)
Query: 2 EDTKDFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDP 61
ED D EPLEP+L N+I+Q+SL+WIF CSCSLAVQLSK RESVLIISTDP
Sbjct: 16 EDAPDVEPLEPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKGRESVLIISTDP 75
Query: 62 AHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQE 121
AHNISDAFDQKFSKVPTKVKG+DNLFAMEIDP++G+ ELP+E+FE E + + K +MQE
Sbjct: 76 AHNISDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVAELPDEFFE-EDNMLSMGKKMMQE 134
Query: 122 IVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLK 181
+ AFPGIDEAMSYAEVM+LVKGMNFS VVFDTAPTGHTLRLL+FP +VERGLG+LM++K
Sbjct: 135 AMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIK 194
Query: 182 SKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLS 241
++++PFI+Q+ ++ GL D N+D ++K++E L VIR V+ QFKDP QTTF+CVCIAEFLS
Sbjct: 195 NQISPFISQMFNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLS 254
Query: 242 LYETERLVQELTRCGIDTHNIIVNQLLLRS-SAPCELCAARHKVQEKYLEQIADLYEDFH 300
LYETERL+QEL +C IDTHNIIVNQL+ PC++C ARHK+Q KYL+Q+ DLYEDFH
Sbjct: 255 LYETERLIQELAKCKIDTHNIIVNQLVFPDPEKPCKMCEARHKIQAKYLDQMEDLYEDFH 314
Query: 301 VTKLPLLEKEVRGASAVNAFSELLLKPYDPPTS 333
+ KLPLL EVRGA VN FS LLL+PY PP++
Sbjct: 315 IVKLPLLPHEVRGADKVNTFSALLLEPYKPPSA 347
>AK223363-1|BAD97083.1| 348|Homo sapiens arsA arsenite transporter,
ATP-binding, homolog 1 variant protein.
Length = 348
Score = 490 bits (1208), Expect = e-138
Identities = 226/333 (67%), Positives = 274/333 (82%), Gaps = 2/333 (0%)
Query: 2 EDTKDFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDP 61
ED D EPLEP+L N+I+Q+SL+WIF CSCSLAVQLSK RESVLIISTDP
Sbjct: 16 EDAPDVEPLEPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKGRESVLIISTDP 75
Query: 62 AHNISDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQE 121
AHNISDAFDQKFSKVPTKVKG+DNLFAMEIDP++G+ ELP+E+FE E + + K +MQE
Sbjct: 76 AHNISDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVAELPDEFFE-EDNMLSMGKKMMQE 134
Query: 122 IVGAFPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLK 181
+ AFPGIDEAMSYAEVM+LVKGMNFS VVFDTAPTGHTLRLL+FP +VERGLG+LM++K
Sbjct: 135 AMSAFPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIK 194
Query: 182 SKVAPFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLS 241
++++PFI+Q+ ++ GL D N+D ++K++E L VIR V+ QFKDP QTTF+CVCIAEFLS
Sbjct: 195 NQISPFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLS 254
Query: 242 LYETERLVQELTRCGIDTHNIIVNQLLLRS-SAPCELCAARHKVQEKYLEQIADLYEDFH 300
LYETERL+QEL +C IDTHNIIVNQL+ PC++C ARHK+Q KY +Q+ DLYEDFH
Sbjct: 255 LYETERLIQELAKCKIDTHNIIVNQLVFPDPEKPCKMCEARHKIQAKYPDQMEDLYEDFH 314
Query: 301 VTKLPLLEKEVRGASAVNAFSELLLKPYDPPTS 333
+ KLPLL EVRGA VN FS LLL+PY PP++
Sbjct: 315 IVKLPLLPHEVRGADKVNTFSALLLEPYKPPSA 347
>U60276-1|AAC50731.1| 332|Homo sapiens hASNA-I protein.
Length = 332
Score = 486 bits (1199), Expect = e-137
Identities = 223/329 (67%), Positives = 273/329 (82%), Gaps = 2/329 (0%)
Query: 6 DFEPLEPSLKNVIDQKSLRWIFXXXXXXXXXXXCSCSLAVQLSKVRESVLIISTDPAHNI 65
D EPLEP+L N+I+Q+SL+WIF CSCSLAVQLSK RESVLIISTDPAHNI
Sbjct: 4 DVEPLEPTLSNIIEQRSLKWIFVGGKGGVGKTTCSCSLAVQLSKGRESVLIISTDPAHNI 63
Query: 66 SDAFDQKFSKVPTKVKGFDNLFAMEIDPNVGLTELPEEYFEGESEAMRLDKGVMQEIVGA 125
SDAFDQKFSKVPTKVKG+DNLFAMEIDP++G+ ++P+E+FE E + + K +MQE + A
Sbjct: 64 SDAFDQKFSKVPTKVKGYDNLFAMEIDPSLGVADVPDEFFE-EDNMLSMGKKMMQEAMSA 122
Query: 126 FPGIDEAMSYAEVMKLVKGMNFSAVVFDTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
FPGIDEAMSYAEVM+LVKGMNFS VVFDTAPTGHTLRLL+FP +VERGLG+LM++K++++
Sbjct: 123 FPGIDEAMSYAEVMRLVKGMNFSVVVFDTAPTGHTLRLLNFPTIVERGLGRLMQIKNQIS 182
Query: 186 PFINQIASLFGLADFNSDMFSNKMDEMLSVIRQVNAQFKDPNQTTFVCVCIAEFLSLYET 245
PFI+Q+ ++ GL D N+D ++K++E L VIR V+ QFKDP QTTF+CVCIAEFLSLYET
Sbjct: 183 PFISQMCNMLGLGDMNADQLASKLEETLPVIRSVSEQFKDPEQTTFICVCIAEFLSLYET 242
Query: 246 ERLVQELTRCGIDTHNIIVNQLLLRS-SAPCELCAARHKVQEKYLEQIADLYEDFHVTKL 304
ERL+QEL +C IDTHNIIVNQL+ PC++C ARHK+Q KYL+Q+ DLYEDFH+ KL
Sbjct: 243 ERLIQELAKCKIDTHNIIVNQLVFPDPEKPCKMCEARHKIQAKYLDQMEDLYEDFHIVKL 302
Query: 305 PLLEKEVRGASAVNAFSELLLKPYDPPTS 333
PLL EVRGA VN FS LLL+PY PP++
Sbjct: 303 PLLPHEVRGADKVNTFSALLLEPYKPPSA 331
>M59807-1|AAA36367.2| 234|Homo sapiens NK4 protein.
Length = 234
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 270 RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRG 313
R L +E YLE +A YE+ H PLLEKE G
Sbjct: 82 RGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDG 125
>BC105602-1|AAI05603.1| 188|Homo sapiens interleukin 32 protein.
Length = 188
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 270 RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRG 313
R L +E YLE +A YE+ H PLLEKE G
Sbjct: 36 RGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDG 79
>BC018782-1|AAH18782.1| 188|Homo sapiens interleukin 32 protein.
Length = 188
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 270 RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRG 313
R L +E YLE +A YE+ H PLLEKE G
Sbjct: 36 RGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDG 79
>BC009401-1|AAH09401.1| 234|Homo sapiens IL32 protein protein.
Length = 234
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 270 RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRG 313
R L +E YLE +A YE+ H PLLEKE G
Sbjct: 82 RGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDG 125
>AY495334-3|AAS80148.1| 178|Homo sapiens tumor necrosis factor
alpha-inducing factor delta isoform protein.
Length = 178
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 270 RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRG 313
R L +E YLE +A YE+ H PLLEKE G
Sbjct: 26 RGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDG 69
>AY495334-2|AAS80146.1| 131|Homo sapiens tumor necrosis factor
alpha-inducing factor alpha isoform protein.
Length = 131
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 270 RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRG 313
R L +E YLE +A YE+ H PLLEKE G
Sbjct: 36 RGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDG 79
>AY495334-1|AAS80147.1| 188|Homo sapiens tumor necrosis factor
alpha-inducing factor beta isoform protein.
Length = 188
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 270 RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRG 313
R L +E YLE +A YE+ H PLLEKE G
Sbjct: 36 RGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDG 79
>AY495333-1|AAS80145.1| 178|Homo sapiens tumor necrosis factor
alpha-inducing factor delta isoform protein.
Length = 178
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 270 RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRG 313
R L +E YLE +A YE+ H PLLEKE G
Sbjct: 26 RGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDG 69
>AY495332-1|AAS80144.1| 188|Homo sapiens tumor necrosis factor
alpha-inducing factor beta isoform protein.
Length = 188
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 270 RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRG 313
R L +E YLE +A YE+ H PLLEKE G
Sbjct: 36 RGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDG 79
>AY495331-1|AAS80143.1| 131|Homo sapiens tumor necrosis factor
alpha-inducing factor alpha isoform protein.
Length = 131
Score = 31.5 bits (68), Expect = 4.3
Identities = 17/44 (38%), Positives = 20/44 (45%)
Query: 270 RSSAPCELCAARHKVQEKYLEQIADLYEDFHVTKLPLLEKEVRG 313
R L +E YLE +A YE+ H PLLEKE G
Sbjct: 36 RGQVMSSLAELEDDFKEGYLETVAAYYEEQHPELTPLLEKERDG 79
>U41221-1|AAA82080.1| 887|Homo sapiens hMSH2 protein.
Length = 887
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 94 NVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAM-SYAEVMKLVKGMNFSAVVF 152
N LT L EEY + ++E +++EIV G E M + +V+ + + A V
Sbjct: 553 NSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS 612
Query: 153 DTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+ AP + P ++E+G G+++ S+ A
Sbjct: 613 NGAPVPYVR-----PAILEKGQGRIILKASRHA 640
>U04045-1|AAA61870.1| 934|Homo sapiens hMSH2 protein.
Length = 934
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 94 NVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAM-SYAEVMKLVKGMNFSAVVF 152
N LT L EEY + ++E +++EIV G E M + +V+ + + A V
Sbjct: 553 NSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS 612
Query: 153 DTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+ AP + P ++E+G G+++ S+ A
Sbjct: 613 NGAPVPYVR-----PAILEKGQGRIILKASRHA 640
>U03911-1|AAA18643.1| 934|Homo sapiens hMSH2 protein.
Length = 934
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 94 NVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAM-SYAEVMKLVKGMNFSAVVF 152
N LT L EEY + ++E +++EIV G E M + +V+ + + A V
Sbjct: 553 NSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS 612
Query: 153 DTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+ AP + P ++E+G G+++ S+ A
Sbjct: 613 NGAPVPYVR-----PAILEKGQGRIILKASRHA 640
>L47583-1|AAB59564.1| 934|Homo sapiens DNA mismatch repair protein
protein.
Length = 934
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 94 NVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAM-SYAEVMKLVKGMNFSAVVF 152
N LT L EEY + ++E +++EIV G E M + +V+ + + A V
Sbjct: 553 NSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS 612
Query: 153 DTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+ AP + P ++E+G G+++ S+ A
Sbjct: 613 NGAPVPYVR-----PAILEKGQGRIILKASRHA 640
>L47582-1|AAB59565.1| 934|Homo sapiens DNA mismatch repair protein
protein.
Length = 934
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 94 NVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAM-SYAEVMKLVKGMNFSAVVF 152
N LT L EEY + ++E +++EIV G E M + +V+ + + A V
Sbjct: 553 NSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS 612
Query: 153 DTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+ AP + P ++E+G G+++ S+ A
Sbjct: 613 NGAPVPYVR-----PAILEKGQGRIILKASRHA 640
>L47581-1|AAA76858.1| 934|Homo sapiens DNA mismatch repair protein
protein.
Length = 934
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 94 NVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAM-SYAEVMKLVKGMNFSAVVF 152
N LT L EEY + ++E +++EIV G E M + +V+ + + A V
Sbjct: 553 NSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS 612
Query: 153 DTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+ AP + P ++E+G G+++ S+ A
Sbjct: 613 NGAPVPYVR-----PAILEKGQGRIILKASRHA 640
>L47580-1|AAB59572.1| 810|Homo sapiens MSH2 protein.
Length = 810
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 94 NVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAM-SYAEVMKLVKGMNFSAVVF 152
N LT L EEY + ++E +++EIV G E M + +V+ + + A V
Sbjct: 553 NSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS 612
Query: 153 DTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+ AP + P ++E+G G+++ S+ A
Sbjct: 613 NGAPVPYVR-----PAILEKGQGRIILKASRHA 640
>BC104956-1|AAI04957.1| 1700|Homo sapiens SKIP protein protein.
Length = 1700
Score = 31.1 bits (67), Expect = 5.7
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 170 VERGLGKLMRLKSKVAPFINQIASLFGLADFN--SDMFSNKMDEMLSVIRQVNAQFKDPN 227
V L KL+ + P N+I L GLA N +D ++ + + A+ PN
Sbjct: 107 VSPDLPKLISSMNVQQPKENEIVVLSGLASGNLQADFEVSQCPWLPDICLVQCARGNRPN 166
Query: 228 QTTFVCVCIAEFLSLYETERLVQELTRCGIDTHNIIVNQLLLRSSAPCE---LCAARHKV 284
T + I +FL E LVQE + ++T+ + + S + E L A+ H
Sbjct: 167 STNCIIFEINKFLIGLE---LVQE-RQLHLETNILKLEDDTNCSLSSIEEDFLTASEHLE 222
Query: 285 QEKYLEQIADLYEDFHVTKLPLLEKEVRGASAV 317
+E +++ + YE+ +V+ L K+++GA+ V
Sbjct: 223 EESEVDESRNDYENINVSANVLESKQLKGATQV 255
>BC104954-1|AAI04955.1| 1700|Homo sapiens SKIP protein protein.
Length = 1700
Score = 31.1 bits (67), Expect = 5.7
Identities = 40/153 (26%), Positives = 71/153 (46%), Gaps = 9/153 (5%)
Query: 170 VERGLGKLMRLKSKVAPFINQIASLFGLADFN--SDMFSNKMDEMLSVIRQVNAQFKDPN 227
V L KL+ + P N+I L GLA N +D ++ + + A+ PN
Sbjct: 107 VSPDLPKLISSMNVQQPKENEIVVLSGLASGNLQADFEVSQCPWLPDICLVQCARGNRPN 166
Query: 228 QTTFVCVCIAEFLSLYETERLVQELTRCGIDTHNIIVNQLLLRSSAPCE---LCAARHKV 284
T + I +FL E LVQE + ++T+ + + S + E L A+ H
Sbjct: 167 STNCIIFEINKFLIGLE---LVQE-RQLHLETNILKLEDDTNCSLSSIEEDFLTASEHLE 222
Query: 285 QEKYLEQIADLYEDFHVTKLPLLEKEVRGASAV 317
+E +++ + YE+ +V+ L K+++GA+ V
Sbjct: 223 EESEVDESRNDYENINVSANVLESKQLKGATQV 255
>BC021566-1|AAH21566.1| 934|Homo sapiens mutS homolog 2, colon
cancer, nonpolyposis type 1 (E. coli) protein.
Length = 934
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 94 NVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAM-SYAEVMKLVKGMNFSAVVF 152
N LT L EEY + ++E +++EIV G E M + +V+ + + A V
Sbjct: 553 NSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS 612
Query: 153 DTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+ AP + P ++E+G G+++ S+ A
Sbjct: 613 NGAPVPYVR-----PAILEKGQGRIILKASRHA 640
>AY601851-1|AAS99351.1| 934|Homo sapiens mutS homolog 2, colon
cancer, nonpolyposis type 1 (E. coli) protein.
Length = 934
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 94 NVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAM-SYAEVMKLVKGMNFSAVVF 152
N LT L EEY + ++E +++EIV G E M + +V+ + + A V
Sbjct: 553 NSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS 612
Query: 153 DTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+ AP + P ++E+G G+++ S+ A
Sbjct: 613 NGAPVPYVR-----PAILEKGQGRIILKASRHA 640
>AK222860-1|BAD96580.1| 878|Homo sapiens mutS homolog 2 variant
protein.
Length = 878
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/93 (26%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 94 NVGLTELPEEYFEGESEAMRLDKGVMQEIVGAFPGIDEAM-SYAEVMKLVKGMNFSAVVF 152
N LT L EEY + ++E +++EIV G E M + +V+ + + A V
Sbjct: 553 NSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLAQLDAVVSFAHVS 612
Query: 153 DTAPTGHTLRLLSFPQVVERGLGKLMRLKSKVA 185
+ AP + P ++E+G G+++ S+ A
Sbjct: 613 NGAPVPYVR-----PAILEKGQGRIILKASRHA 640
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.320 0.135 0.386
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 42,885,897
Number of Sequences: 224733
Number of extensions: 1543246
Number of successful extensions: 2906
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2881
Number of HSP's gapped (non-prelim): 27
length of query: 335
length of database: 73,234,838
effective HSP length: 90
effective length of query: 245
effective length of database: 53,008,868
effective search space: 12987172660
effective search space used: 12987172660
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 66 (30.7 bits)
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