Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001942-TA|BGIBMGA001942-PA|IPR002052|N-6
Adenine-specific DNA methylase, IPR001680|WD-40 repeat,
IPR011046|WD40-like
(763 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 49 3e-06
SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit Prw1... 46 2e-05
SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces pombe... 45 3e-05
SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein interm... 43 2e-04
SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyc... 43 2e-04
SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces... 41 6e-04
SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomy... 41 7e-04
SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces po... 40 0.001
SPBC713.05 |||WD repeat protein, human MAPK organizer 1 |Schizos... 40 0.002
SPBC215.15 |sec13||COPII-coated vesicle component Sec13|Schizosa... 40 0.002
SPAC4F8.11 |||WD repeat protein, human WDR24 family|Schizosaccha... 40 0.002
SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces pombe... 39 0.002
SPBC1A4.07c |||U3 snoRNP-associated protein Sof1|Schizosaccharom... 37 0.012
SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr 2|||... 36 0.028
SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces pomb... 36 0.028
SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomy... 35 0.037
SPAC4D7.05 |sum1|tif34|translation initiation factor eIF3i|Schiz... 35 0.037
SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces pombe... 34 0.064
SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces pomb... 34 0.085
SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|c... 33 0.15
SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|... 33 0.20
SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces po... 32 0.26
SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2 |S... 32 0.34
SPAC13G6.08 |||Cdc20/Fizzy family WD repeat protein|Schizosaccha... 31 0.60
SPCC63.11 |prp28||U5 snRNP-associated protein Prp28 |Schizosacch... 30 1.4
SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyc... 29 1.8
SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|c... 29 1.8
SPAC9G1.05 |||actin cortical patch component Aip1 |Schizosacchar... 29 1.8
SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 29 2.4
SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces p... 29 2.4
SPAC2C4.06c |||rRNA methyltransferase |Schizosaccharomyces pombe... 29 3.2
SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces ... 29 3.2
SPBC26H8.09c |snf59||SWI/SNF complex subunit Snf59|Schizosacchar... 29 3.2
SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces pomb... 29 3.2
SPBC947.14c |||sequence orphan|Schizosaccharomyces pombe|chr 2||... 29 3.2
SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces po... 29 3.2
SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3 |Schizos... 28 4.2
SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyc... 28 5.6
SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces po... 28 5.6
SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces p... 28 5.6
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 28 5.6
SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces p... 28 5.6
SPAC23H3.05c |swd1||COMPASS complex subunit Swd1|Schizosaccharom... 28 5.6
SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase Hrp1|Schizosac... 27 7.4
SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein Cwf23|Schiz... 27 7.4
SPAC18B11.10 |tup11||transcriptional corepressor Tup11|Schizosac... 27 7.4
SPBC3D6.08c |||mRNA decapping complex subunit |Schizosaccharomyc... 27 9.7
SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyce... 27 9.7
SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces pom... 27 9.7
SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces pom... 27 9.7
SPAC343.04c |gnr1||heterotrimeric G protein beta subunit Gnr1|Sc... 27 9.7
SPBCPT2R1.08c |tlh2||RecQ type DNA helicase Tlh1|Schizosaccharom... 27 9.7
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 48.8 bits (111), Expect = 3e-06
Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 3/115 (2%)
Query: 553 SCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASC 612
SC+ F P + + G+ D I + ++R+ +R+ QGH P+ ++++ S + S
Sbjct: 270 SCLRFFPISGHLLLSGSMDNQIKIWEVYHDRSLLRTFQGHARPIRDLSFSQDGRS-FLST 328
Query: 613 SGDWRVKIWEDGREEPLFMFELGAAVGDVKWA--PYSSTVFAACTADGKVYVYDL 665
S D +K+W+ + L F VK+ P F A TAD ++ +D+
Sbjct: 329 SFDKTIKLWDTELGKCLNCFNSDRLTNCVKFQVDPDKPNEFLAGTADKRILQFDI 383
>SPAC29A4.18 |prw1||Clr6 histone deacetylase complex subunit
Prw1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 431
Score = 46.0 bits (104), Expect = 2e-05
Identities = 29/119 (24%), Positives = 57/119 (47%), Gaps = 5/119 (4%)
Query: 553 SCICFHPEKPDIFMVGTEDGMIHTCSLKY---NRNYVRSVQGHHMPVYRINYNYFNNSIY 609
S + FH + D+ + D +H ++ + RSV H P++ + +N N+ I
Sbjct: 238 SDVRFHYKHQDLLASVSYDQYLHVHDIRRPDASTKPARSVHAHSGPIHSVAFNPHNDFIL 297
Query: 610 ASCSGDWRVKIWE-DGREEPLFMFE-LGAAVGDVKWAPYSSTVFAACTADGKVYVYDLN 666
A+CS D + +W+ + L E V + ++P+ + A+ +AD + V+DL+
Sbjct: 298 ATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSADRRTLVWDLS 356
Score = 33.1 bits (72), Expect = 0.15
Identities = 18/71 (25%), Positives = 32/71 (45%)
Query: 555 ICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSG 614
+ F+P I + D I L+ + +++GH V +I+++ I AS S
Sbjct: 287 VAFNPHNDFILATCSTDKTIALWDLRNLNQRLHTLEGHEDIVTKISFSPHEEPILASTSA 346
Query: 615 DWRVKIWEDGR 625
D R +W+ R
Sbjct: 347 DRRTLVWDLSR 357
>SPBC1711.16 |||WD repeat protein Pwp1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 45.2 bits (102), Expect = 3e-05
Identities = 36/129 (27%), Positives = 60/129 (46%), Gaps = 8/129 (6%)
Query: 565 FMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDG 624
F +GT++G+++ C + V +Q H P+ ++ N S A+ S D VK+W
Sbjct: 355 FFIGTDNGIVYYCDARNLSKSVWQLQAHDGPISCLSVNPSVPSFVATGSTDRVVKLWNTS 414
Query: 625 REEPLFMFELGAAVGDVKWAPYS---STVF--AACTADGKVYVYDLNVNKYRPICVQAVV 679
P + VG V ++ ST F AA + G V V+D N P +A
Sbjct: 415 DSSPKMVVSRDLDVGRVFTCSFTTDESTAFHLAASGSKGVVRVWDTATN---PGVRKAFE 471
Query: 680 SKKTKKLTR 688
S+ T+++T+
Sbjct: 472 SRVTEEVTK 480
Score = 28.3 bits (60), Expect = 4.2
Identities = 17/54 (31%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 438 VICLDVYKETPYLICVGLYDGNVCVYNAQL-TLESSYQYKSDSVRDKHSNIVWE 490
V CLD Y + P ++ G YD + + +L SS+Q SD N+ W+
Sbjct: 300 VSCLDWYSKAPSVLLSGSYDKTAKIADLRLEEAPSSFQVTSDV-----ENVAWD 348
>SPBC646.17c |dic1|SPBC855.01c, SPBP35G2.01c, mug44|dynein
intermediate chain Dic1|Schizosaccharomyces pombe|chr
2|||Manual
Length = 544
Score = 42.7 bits (96), Expect = 2e-04
Identities = 52/199 (26%), Positives = 81/199 (40%), Gaps = 39/199 (19%)
Query: 553 SCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQ-------GHHMPVYRINY---- 601
+C+ F PE F+VG EDG + + + + ++VQ GH++ + I+
Sbjct: 348 TCLSFIPENNMEFLVGAEDGKLQR-GYRSDYSETKAVQPSNVSYEGHNVFISGIDVMTSN 406
Query: 602 --NYF---NNSIYASCSGDWRVKIWE--------------DGREEPLF----MFELGAAV 638
N F N + S DW V++W+ D E+ + F A V
Sbjct: 407 SQNVFLEKNKDFALTSSFDWTVRLWQCSPSRNQHELVPSNDLDEQVIINSCKTFTHKAMV 466
Query: 639 GDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLPVI 698
DVKW FA+ A G + ++DL + P+ K L +I + +
Sbjct: 467 FDVKWCVSEPCCFASVDALGNLNLWDLQKDVEAPVTSDI---PDGKPLNKIAWQPEKRNL 523
Query: 699 VCGDTKGTCHVLK-LSPNL 716
CG G H+ K LSPNL
Sbjct: 524 ACGGLNGNVHIYKHLSPNL 542
>SPCC1672.10 |mis16||kinetochore protein Mis16 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 430
Score = 42.7 bits (96), Expect = 2e-04
Identities = 28/114 (24%), Positives = 51/114 (44%), Gaps = 6/114 (5%)
Query: 557 FHPEKPDIFMVGTEDG--MIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSG 614
FHP+ + ++D IH L + +Q H + + N FN+ + A+ S
Sbjct: 243 FHPQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASA 302
Query: 615 DWRVKIWEDGREEPLFMFELGAAVGDV---KWAPYSSTVFAACTADGKVYVYDL 665
D V +W D R + L +V +W+P+ + A+ + D +V ++DL
Sbjct: 303 DKTVALW-DLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASSSTDRRVCIWDL 355
Score = 31.5 bits (68), Expect = 0.45
Identities = 16/70 (22%), Positives = 32/70 (45%)
Query: 553 SCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASC 612
+ + +P + + D + L+ + +++GH VY + ++ + I AS
Sbjct: 285 NAVAINPFNDYLLATASADKTVALWDLRNPYQRLHTLEGHEDEVYGLEWSPHDEPILASS 344
Query: 613 SGDWRVKIWE 622
S D RV IW+
Sbjct: 345 STDRRVCIWD 354
Score = 27.1 bits (57), Expect = 9.7
Identities = 33/133 (24%), Positives = 56/133 (42%), Gaps = 14/133 (10%)
Query: 552 GSCICFHPEKPDIFMVGTEDGMI-----HTCSLKYNRNYVRS-VQGHHMPVYRINYNYF- 604
G +C++P P G ED +I T S + V S + +H +N F
Sbjct: 185 GFGLCWNPNLPGNLATGAEDQVICLWDVQTQSFTSSETKVISPIAKYHRHTDIVNDVQFH 244
Query: 605 --NNSIYASCSGDWRVKIWE----DGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADG 658
+ ++ AS S D ++I + E P + A+ V P++ + A +AD
Sbjct: 245 PQHEALLASVSDDCTLQIHDTRLNPEEEAPKVIQAHSKAINAVAINPFNDYLLATASADK 304
Query: 659 KVYVYDLNVNKYR 671
V ++DL N Y+
Sbjct: 305 TVALWDLR-NPYQ 316
>SPBC16C6.13c |sec27||coatomer beta' subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 796
Score = 41.1 bits (92), Expect = 6e-04
Identities = 35/155 (22%), Positives = 65/155 (41%), Gaps = 10/155 (6%)
Query: 558 HPEKPDIFMVGTEDGMIHTC-SLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDW 616
HP +P F++ + D M C + + V++ +GH V + N + + +AS D
Sbjct: 107 HPTQP--FLLTSSDDMTIKCFNWDMSWKCVQTFEGHSRYVMSLAINPKDTNTFASSCLDG 164
Query: 617 RVKIWEDGREEPLFMFEL-GAAVGDVKWAPYSSTVFAACTADGK-VYVYDLNVNKYRPIC 674
VK+W G F + V V + P + D + V+D C
Sbjct: 165 TVKVWSFGSSVANFTLQAHDRGVNYVNYYPAGDKPYLITAGDDNLIKVWDYQTK----AC 220
Query: 675 VQAVVSKKTKKLTRIDFNTRLPVIVCGDTKGTCHV 709
V+ ++ T ++ F+++ P+I+ G GT +
Sbjct: 221 VR-ILEGHTNNVSFAFFHSKFPIIISGSEDGTVKI 254
>SPBC21B10.05c |pop3|wat1|WD repeat protein Pop3|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 314
Score = 40.7 bits (91), Expect = 7e-04
Identities = 32/169 (18%), Positives = 75/169 (44%), Gaps = 7/169 (4%)
Query: 544 TMINVNSCGSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNY 603
T+ + +S + +C P+K + G ++ + ++ + + +GH V I + +
Sbjct: 35 TIQHADSQVNRLCISPDKKFLAAAGNPHVRLYDINTS-SQMPLMTFEGHTNNVTAIAF-H 92
Query: 604 FNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVY 663
+ A+ S D VK+W+ ++ + V D+ P + + C G+V +
Sbjct: 93 CDGKWLATSSEDGTVKVWDMRAPSVQRNYDHKSPVNDLLIHPNQGELLS-CDQSGRVRAW 151
Query: 664 DLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLPVIVCGDTKGTCHVLKL 712
DL N C ++ ++ ++ I + +++ G+ KG C+V ++
Sbjct: 152 DLGENS----CTHELIPEEDVPMSSITVGSDGSMLIAGNNKGNCYVWRM 196
>SPAC144.13c |srw1|ste9|CDK inhibitor Srw1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 556
Score = 40.3 bits (90), Expect = 0.001
Identities = 25/100 (25%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 568 GTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREE 627
G ++ ++H ++ +Y R + H V + +N N ++ AS D + +W+ E+
Sbjct: 350 GRDNHILHR-DVRAPEHYFRVLTAHRQEVCGLEWNS-NENLLASGGNDNALMVWDKFEEK 407
Query: 628 PLFMFELG-AAVGDVKWAPYSSTVFAA--CTADGKVYVYD 664
PL+ F AAV + W+P+ + A+ TAD + +++
Sbjct: 408 PLYSFHNHIAAVKAITWSPHQRGILASGGGTADRTIKLWN 447
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 580 KYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSG--DWRVKIWEDGREEPLFMFELGAA 637
K+ + S H V I ++ I AS G D +K+W R L + G+
Sbjct: 403 KFEEKPLYSFHNHIAAVKAITWSPHQRGILASGGGTADRTIKLWNTQRGSMLHNIDTGSQ 462
Query: 638 VGDVKWA 644
V ++ W+
Sbjct: 463 VCNLLWS 469
>SPBC713.05 |||WD repeat protein, human MAPK organizer 1
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 10/123 (8%)
Query: 586 VRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAP 645
+ GH + ++ Y +++ +ASC GD +++W+ + LG + +
Sbjct: 49 IHEYAGHGHEILDLDLVY-DSTKFASCGGDKFIQVWDVNTGK--VDRRLGGHLAQINTIR 105
Query: 646 YS--STVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLPVIVCGDT 703
Y+ S++ A+ + D KV ++D N + PI V++ ++ ID L IV G T
Sbjct: 106 YNEDSSILASGSFDSKVRLWDCRSNSFSPI---QVLADAKDSVSSIDIAEHL--IVTGST 160
Query: 704 KGT 706
GT
Sbjct: 161 DGT 163
>SPBC215.15 |sec13||COPII-coated vesicle component
Sec13|Schizosaccharomyces pombe|chr 2|||Manual
Length = 297
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/102 (30%), Positives = 51/102 (50%), Gaps = 6/102 (5%)
Query: 569 TEDGMIHTCSLKYNRN-YVRSVQGHHMPVYRINYNYFN-NSIYASCSGDWRVKIW-EDGR 625
+ D I S++ N+ + +++GH PV+++ + + +I AS S D V +W E G
Sbjct: 28 SSDQTIKVFSIENNQQTLLETLRGHSGPVWQLGWAHPKFGTILASASYDGHVIVWRETGG 87
Query: 626 EEPLFMFELG--AAVGDVKWAPYSSTVFAAC-TADGKVYVYD 664
M A+V V WAP+ AC ++DGKV V +
Sbjct: 88 VWSELMDHTAHQASVNAVSWAPHEYGALLACASSDGKVSVLE 129
Score = 27.1 bits (57), Expect = 9.7
Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 6/67 (8%)
Query: 610 ASCSGDWRVKIWE---DG--REEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYD 664
AS S D V IW DG ++ PL + V W+ S + A D KVY++
Sbjct: 225 ASASQDKNVFIWTKEGDGPWQKTPLTEEKFPDIAWRVSWS-LSGNILAVSCGDNKVYLFK 283
Query: 665 LNVNKYR 671
+ NK++
Sbjct: 284 ESQNKWQ 290
>SPAC4F8.11 |||WD repeat protein, human WDR24
family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 846
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/93 (21%), Positives = 44/93 (47%), Gaps = 3/93 (3%)
Query: 555 ICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSG 614
+ F P +P+ F+ + G++ +++ + + H+ V +NY+ N ASC
Sbjct: 183 VVFSPSEPNEFVAAYDSGILQKWDIRFPKLPFLKLAAHNGVVLCVNYSP-NGVFLASCGR 241
Query: 615 DWRVKIWE--DGREEPLFMFELGAAVGDVKWAP 645
D ++IW+ +++ L + + V+W P
Sbjct: 242 DKTIRIWDSTSNKKKSLITINNVSPLNCVRWRP 274
>SPBC1711.07 |||WD repeat protein Rrb1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 480
Score = 39.1 bits (87), Expect = 0.002
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 636 AAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRL 695
AAV D++W+P VF++C+ DG ++D+ NK + + V + + + +NTR+
Sbjct: 292 AAVEDLQWSPSEKNVFSSCSCDGTFRIWDVR-NKQKTSAL-TVNAHPGVDVNVLSWNTRV 349
Query: 696 P-VIVCGDTKGTCHVLKL 712
P ++ G G V L
Sbjct: 350 PNLLATGADNGVWSVWDL 367
Score = 30.7 bits (66), Expect = 0.79
Identities = 37/163 (22%), Positives = 73/163 (44%), Gaps = 25/163 (15%)
Query: 467 LTLESSYQYKSDSVRD-KHSNIVWEVRWGARLIDGESTFFSISGDGRVVQWAVMPGELQA 525
LT S+ +++DS H+ V +++W ++ F S S DG W V Q
Sbjct: 272 LTKYSNGGWQTDSSPFLSHTAAVEDLQWSP---SEKNVFSSCSCDGTFRIWDVR--NKQK 326
Query: 526 TTIITLTSNVPPIPGPDGTMINVNSCGSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNY 585
T+ +T+ ++ PG D +NV S + + P++ G ++G+ L+ ++
Sbjct: 327 TSALTVNAH----PGVD---VNVLSWNTRV------PNLLATGADNGVWSVWDLRSLKSS 373
Query: 586 ------VRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE 622
V S + H P+Y I ++ +S+ D ++ +W+
Sbjct: 374 SSVATPVASFKWHRAPIYSIEWHPNEDSVIGVVGADNQISLWD 416
Score = 27.9 bits (59), Expect = 5.6
Identities = 32/149 (21%), Positives = 62/149 (41%), Gaps = 19/149 (12%)
Query: 374 WRFQFEPMRSH--AVCDVQWNPHYQDLFAVAYGSLDFTSQQKTGCLCLYSIKNPAYPEYA 431
W+ P SH AV D+QW+P +++F+ S D G ++ ++N
Sbjct: 280 WQTDSSPFLSHTAAVEDLQWSPSEKNVFSSC--SCD-------GTFRIWDVRNKQKTSAL 330
Query: 432 VVTDSPVICLDVYK---ETPYLICVGLYDGNVCVYNAQLTLESSYQYKSDSVRDK-HSNI 487
V P + ++V P L+ G +G V++ + +L+SS + K H
Sbjct: 331 TVNAHPGVDVNVLSWNTRVPNLLATGADNGVWSVWDLR-SLKSSSSVATPVASFKWHRAP 389
Query: 488 VWEVRWGARLIDGESTFFSISGDGRVVQW 516
++ + W + +S + D ++ W
Sbjct: 390 IYSIEWHP---NEDSVIGVVGADNQISLW 415
>SPBC1A4.07c |||U3 snoRNP-associated protein
Sof1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 436
Score = 36.7 bits (81), Expect = 0.012
Identities = 17/67 (25%), Positives = 29/67 (43%)
Query: 599 INYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADG 658
+ +NY S+ AS D + I++ PL + W P + F A + D
Sbjct: 193 VKFNYTETSVLASAGMDRSIVIYDLRTSSPLTKLITKLRTNSISWNPMEAFNFVAGSEDH 252
Query: 659 KVYVYDL 665
+Y+YD+
Sbjct: 253 NLYMYDM 259
>SPBC577.09 |||ERCC-8 homolog |Schizosaccharomyces pombe|chr
2|||Manual
Length = 404
Score = 35.5 bits (78), Expect = 0.028
Identities = 26/128 (20%), Positives = 53/128 (41%), Gaps = 7/128 (5%)
Query: 584 NYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKW 643
N V + H + +++ F+N I+ S S D +K+W+ + + F + + W
Sbjct: 94 NAVPARTSHKFGITDLHWFPFDNGIFTSSSFDHTLKVWDVSTLQEAYTFTMEDMIYSHAW 153
Query: 644 APYSS-TVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLP-VIVCG 701
+P +S + A + + D+ Y +S T + +D+ + V+ G
Sbjct: 154 SPIASHCLIATAYRSSSIRLCDMQSGSY-----THSLSGHTGNVLAVDWCPKNEFVLASG 208
Query: 702 DTKGTCHV 709
GTC +
Sbjct: 209 SADGTCRL 216
>SPBC428.19c |||U3 snoRNP protein Utp15 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 494
Score = 35.5 bits (78), Expect = 0.028
Identities = 23/105 (21%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
Query: 564 IFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWED 623
+ + G G++ L R+ +R++ H PV+ + + N+ + S S D VK+W+
Sbjct: 95 LLLAGDATGLVQIFDLS-TRSILRALDAHQFPVHVTQFCPYANTTFLSGSDDKTVKVWD- 152
Query: 624 GREEPLFMFELGAAVGDVKWAPY-SSTVFAACTADGKVYVYDLNV 667
++L V+ A + S+T + DG + ++D +
Sbjct: 153 -LSTGAVQYDLSGHEDYVRTASWMSATRLVSGGYDGTIRLWDTRI 196
>SPBC3D6.12 |||U3 snoRNA associted protein Dip2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 922
Score = 35.1 bits (77), Expect = 0.037
Identities = 49/230 (21%), Positives = 97/230 (42%), Gaps = 28/230 (12%)
Query: 446 ETPYLICVGLYDGNVCVYNAQLTLESS-YQYKSDSVRDK---HSNIVWEVRWGARLIDGE 501
E Y++ + + C+ +A + E Y S S+ ++ H +W++ G DG
Sbjct: 434 ECGYVLAASFINNDKCIVSAYKSGELEVYDIASSSLIERIQAHDGAIWDLAVGH---DG- 489
Query: 502 STFFSISGDGRVVQWAV------MPGELQATTIITLTSNVPPIPGPDGTMINVNSCGSCI 555
+ F + S D V W++ +PG + T + L D + ++ G +
Sbjct: 490 TYFATASADHTVKLWSLKSSFDFVPGTTRKVTTLKLEQTRQIDFTDDVLAVKISPDGRFV 549
Query: 556 CFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGD 615
++ + + SLK+ N + GH +PV ++ +Y ++ + +CS D
Sbjct: 550 AAS-------LLDNTVKVYYLDSLKFFLN----LYGHKLPVLSMDISY-DSKLLVTCSAD 597
Query: 616 WRVKIWE-DGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYD 664
VKIW D + +F ++ +V + P + F C+ D +V +D
Sbjct: 598 KNVKIWGLDFGDCHKSIFAHQDSIMEVTFQPDTYNFF-TCSKDREVRYWD 646
>SPAC4D7.05 |sum1|tif34|translation initiation factor
eIF3i|Schizosaccharomyces pombe|chr 1|||Manual
Length = 328
Score = 35.1 bits (77), Expect = 0.037
Identities = 21/81 (25%), Positives = 38/81 (46%), Gaps = 1/81 (1%)
Query: 589 VQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSS 648
+QGH P+ +I YN+ + ++ SC+ D + +W E L +E SS
Sbjct: 6 LQGHERPLTQIKYNHDGDLLF-SCAKDKVINVWFSHNGERLGTYEGHTGAIWTCDINKSS 64
Query: 649 TVFAACTADGKVYVYDLNVNK 669
T+ + AD + ++D+ K
Sbjct: 65 TLMVSGAADNTMRLWDVKTGK 85
>SPAC821.08c |slp1||sleepy homolog Slp1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 488
Score = 34.3 bits (75), Expect = 0.064
Identities = 24/86 (27%), Positives = 38/86 (44%), Gaps = 2/86 (2%)
Query: 568 GTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREE 627
G+ G IH ++ + + ++QGH V + + + AS D V+IW+
Sbjct: 279 GSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQL-ASGGNDNVVQIWDARSSI 337
Query: 628 PLF-MFELGAAVGDVKWAPYSSTVFA 652
P F AAV V W P+ S + A
Sbjct: 338 PKFTKTNHNAAVKAVAWCPWQSNLLA 363
>SPBPJ4664.04 |||coatomer alpha subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1207
Score = 33.9 bits (74), Expect = 0.085
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 3/67 (4%)
Query: 555 ICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSG 614
I FHP +P +F+ G +D ++ + K +R + S+ GH M R+ + SCS
Sbjct: 59 IAFHPTQP-LFVSGGDDYKVNVWNYK-SRKLLFSLCGH-MDYVRVCTFHHEYPWILSCSD 115
Query: 615 DWRVKIW 621
D ++IW
Sbjct: 116 DQTIRIW 122
>SPAC15F9.02 |seh1||nucleoporin Seh1 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 339
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/84 (26%), Positives = 39/84 (46%), Gaps = 8/84 (9%)
Query: 588 SVQGHHMPVYR-INYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGD-----V 641
++Q +H + + Y+++ + SCS D RVK+++ + + GD V
Sbjct: 8 TIQTNHQDLVNDVTYDFYGRRM-VSCSADQRVKVYDFNDDTETWAITSEWRAGDASLMRV 66
Query: 642 KWA-PYSSTVFAACTADGKVYVYD 664
WA P V A C+ D V +Y+
Sbjct: 67 AWAHPSFGQVLAVCSLDRGVRIYE 90
>SPAC26H5.03 |||WD repeat protein Cac2|Schizosaccharomyces pombe|chr
1|||Manual
Length = 512
Score = 32.7 bits (71), Expect = 0.20
Identities = 9/30 (30%), Positives = 21/30 (70%)
Query: 593 HMPVYRINYNYFNNSIYASCSGDWRVKIWE 622
H P+Y +++ + + +A+C GD +++IW+
Sbjct: 18 HTPIYSVDFQKNSLNKFATCGGDSKIRIWQ 47
>SPBC887.04c |lub1||WD repeat protein Lub1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 32.3 bits (70), Expect = 0.26
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 7/78 (8%)
Query: 549 NSCGSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSI 608
N C +C + P F + DG+I + + ++ + GH VY + Y + N +
Sbjct: 176 NDCVRSLC---QIPGGFASCSNDGVIKLWTS--DGEFLYELHGHTSFVYSLTYIH-NQQL 229
Query: 609 YASCSGDWRVKIWEDGRE 626
ASC D ++IW+ G+E
Sbjct: 230 IASCGEDRTIRIWK-GKE 246
Score = 28.3 bits (60), Expect = 4.2
Identities = 26/103 (25%), Positives = 45/103 (43%), Gaps = 11/103 (10%)
Query: 563 DIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE 622
DIF+ G+ D +I + V+S+ H+ V + +ASCS D +K+W
Sbjct: 149 DIFITGSADKLIKIWN---GEKLVKSILAHNDCVRSLCQIPGG---FASCSNDGVIKLWT 202
Query: 623 DGREEPLFMFELGAAVGDVKWAPY--SSTVFAACTADGKVYVY 663
E F++EL V Y + + A+C D + ++
Sbjct: 203 SDGE---FLYELHGHTSFVYSLTYIHNQQLIASCGEDRTIRIW 242
>SPBP35G2.13c |swc2||chromatin remodeling complex subunit Swc2
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 316
Score = 31.9 bits (69), Expect = 0.34
Identities = 20/78 (25%), Positives = 33/78 (42%)
Query: 190 EPEPVADDLEATAGDVGEEPEGDEKDESKDTGEEVLEIKPRVKKLANQFNFCERAALTYN 249
E E D+E ++ EE E + +E + E++L + R+KK Q N T
Sbjct: 50 EEEEAERDIEISSESSDEEAELKKLEEEGEEVEKILRDEERIKKRKIQKNRAANLQRTLQ 109
Query: 250 FPRRSVDTQTIPPPRANY 267
P+R + P+ Y
Sbjct: 110 PPKRPTPSAASEVPKKKY 127
>SPAC13G6.08 |||Cdc20/Fizzy family WD repeat
protein|Schizosaccharomyces pombe|chr 1|||Manual
Length = 535
Score = 31.1 bits (67), Expect = 0.60
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 596 VYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSST-VFAAC 654
V + Y+Y N I A D ++ W+D P +G + W P T
Sbjct: 233 VSSVAYSY-NGDILAVGRVDGTLQFWQDNERVPRISIHHPGDIGVLAWKPVLETNRLLVG 291
Query: 655 TADGKVYVYDL 665
+G ++VYD+
Sbjct: 292 KGNGNIFVYDI 302
>SPCC63.11 |prp28||U5 snRNP-associated protein Prp28
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 29.9 bits (64), Expect = 1.4
Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 3/44 (6%)
Query: 286 RKQREKEEDKPKRHPIDNLKQLRKKT-AKHVKSAQQIHDEQLAQ 328
R+Q+E EE K K++ D L LRK+T H+++ + DE+ +Q
Sbjct: 42 RRQKEVEEAKAKQN--DKLLDLRKRTFTNHLENNELADDEKKSQ 83
>SPBC1734.01c ||SPBC337.17c|RNA-binding protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 682
Score = 29.5 bits (63), Expect = 1.8
Identities = 32/136 (23%), Positives = 54/136 (39%), Gaps = 6/136 (4%)
Query: 277 FDYYQEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIREAWTI 336
FD + D + EED + L+Q + + ++ + + + A+ I E
Sbjct: 259 FDNNESDQDEEDALIEEDLGNEFDMVKLRQYQLERLRYYYAVVECDSVRTAKVIYETCDG 318
Query: 337 LERLVNQNIYD--DIAQDYRYWDDPSDEFREGMGSLLPLWRFQFEPMRSHAVCDVQW--- 391
E + NIYD I D + DD S E F + ++ H+ + W
Sbjct: 319 AEYETSANIYDLRFIPDDVTFDDDESREVCTKAPEKYEPRDFVTDALQ-HSKVKLSWDAE 377
Query: 392 NPHYQDLFAVAYGSLD 407
+PH +DL A+ S D
Sbjct: 378 DPHRKDLIKKAFTSQD 393
>SPCC18.05c |||notchless-like protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 502
Score = 29.5 bits (63), Expect = 1.8
Identities = 17/78 (21%), Positives = 36/78 (46%), Gaps = 2/78 (2%)
Query: 588 SVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAA-VGDVKWAPY 646
S+ GH + ++ +S + SGD+ ++W+ + P+ + V V WAP
Sbjct: 129 SMNGHDGTIISAQFSPSTSSRLVTGSGDFTARLWDCDTQTPIATMKGHTNWVSCVAWAP- 187
Query: 647 SSTVFAACTADGKVYVYD 664
+++ A + D + +D
Sbjct: 188 DASIIATGSMDNTIRFWD 205
>SPAC9G1.05 |||actin cortical patch component Aip1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 595
Score = 29.5 bits (63), Expect = 1.8
Identities = 14/27 (51%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 638 VGDVKWAPYSSTVFAACTADGKVYVYD 664
V DV+++P FA+ ADGKVYV+D
Sbjct: 192 VYDVRYSPNDER-FASAGADGKVYVFD 217
>SPAC17G6.13 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 433
Score = 29.1 bits (62), Expect = 2.4
Identities = 14/64 (21%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 288 QREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIREAWTILERLVNQNIYD 347
QR++E+ ++ I++ +Q + +H K Q +H+ + R++E + LE+L + ++
Sbjct: 38 QRQEEQLALRKKAIEDARQEVLQQIQHRKFRQYLHEREQEARLQEYY--LEQLQERRAFE 95
Query: 348 DIAQ 351
++ +
Sbjct: 96 NVVR 99
>SPAC20G4.03c |hri1||eIF2 alpha kinase Hri1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 704
Score = 29.1 bits (62), Expect = 2.4
Identities = 12/38 (31%), Positives = 23/38 (60%)
Query: 222 EEVLEIKPRVKKLANQFNFCERAALTYNFPRRSVDTQT 259
++V+ +KP V L+N+ N AL FP+ ++++ T
Sbjct: 153 DDVMNVKPSVNVLSNRLNHLPVEALESCFPQTTLESST 190
>SPAC2C4.06c |||rRNA methyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 455
Score = 28.7 bits (61), Expect = 3.2
Identities = 15/38 (39%), Positives = 21/38 (55%)
Query: 288 QREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQ 325
QRE+E K ++ D K+ RKK K VK +I E+
Sbjct: 418 QREQETFKMYKNDDDTKKRKRKKKKKEVKKKARIQGEE 455
>SPCC330.09 |||rRNA processing protein Enp2 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 634
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/77 (22%), Positives = 33/77 (42%), Gaps = 2/77 (2%)
Query: 567 VGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINY--NYFNNSIYASCSGDWRVKIWEDG 624
+G DG L+ + Y+ QG+ MP+ +++ + + + + +KIWE
Sbjct: 254 IGLSDGATLLYDLRSSSPYMSKDQGYSMPIKSLHWMDSALDGTARVLSADSKIIKIWEKD 313
Query: 625 REEPLFMFELGAAVGDV 641
+P E + DV
Sbjct: 314 TGKPFSSIEPTVELNDV 330
>SPBC26H8.09c |snf59||SWI/SNF complex subunit
Snf59|Schizosaccharomyces pombe|chr 2|||Manual
Length = 515
Score = 28.7 bits (61), Expect = 3.2
Identities = 13/62 (20%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 18 FNQHAIQQKDAASKSRGNLI--EDEALEWLKPRALIKPDDQEDVPEADLDEEVGRVLTTI 75
F+++++ + D+A K GNL+ + +L+ P +P E + + ++ +++ ++ T++
Sbjct: 240 FSENSLSKSDSAVKQEGNLLIHPNNSLKDTAPSKCKEPPVDEALSKKEISDDIAQI-TSV 298
Query: 76 NP 77
P
Sbjct: 299 TP 300
>SPAC11E3.10 |||VanZ-like family protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 162
Score = 28.7 bits (61), Expect = 3.2
Identities = 17/32 (53%), Positives = 19/32 (59%), Gaps = 2/32 (6%)
Query: 189 HEPEPVADDLEATAGDVGEEPEGDEKDESKDT 220
H P +ADDLE A EE EG+E D SK T
Sbjct: 132 HVPT-IADDLEMQASAAEEEEEGEE-DVSKST 161
>SPBC947.14c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 103
Score = 28.7 bits (61), Expect = 3.2
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 3/57 (5%)
Query: 258 QTIPPPRANYGSTALQCIIFDYYQEDYARKQRE-KEEDKPKRHPIDNLKQLRKKTAK 313
Q +PP +AN AL ++ + Y Y KQ K + KP + ++L Q+R+K K
Sbjct: 38 QKMPPQQANKQLNALNNLLDNVYWNKYIPKQVVLKPQFKPSYY--ESLTQIRRKEEK 92
>SPCC663.05c |cia1||histone chaperone Cia1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 262
Score = 28.7 bits (61), Expect = 3.2
Identities = 14/33 (42%), Positives = 21/33 (63%), Gaps = 3/33 (9%)
Query: 190 EPEPVADDLEATAGDVGEEPEGDEKDESKDTGE 222
E E AD++E + EE EGDE++E +D G+
Sbjct: 178 EEEEEADEMEE---EFDEEGEGDEEEEEEDDGD 207
>SPBC15C4.06c ||SPBC21H7.01c|ubiquitin-protein ligase E3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 556
Score = 28.3 bits (60), Expect = 4.2
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 404 GSLDFTSQQKTGCLCLYSIKNPAYPEYAVVTDSPVICLDVY 444
GS F ++ T CLC YS ++P Y E C+D Y
Sbjct: 489 GSKYFDQRECTICLCEYSEESPLYRELPCHHIFHPACIDPY 529
>SPBC1289.11 |spf38|cwf17|splicing factor Spf38|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 340
Score = 27.9 bits (59), Expect = 5.6
Identities = 19/83 (22%), Positives = 36/83 (43%), Gaps = 1/83 (1%)
Query: 586 VRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAP 645
+R +GH V ++ + + S S D +K+W+ ++ + E + V A
Sbjct: 128 IRKHKGHAGVVNALDVLKVGSELLTSVSDDCTMKVWDSRSKDCIKTIEEKYPLTAVAIAQ 187
Query: 646 YSSTVFAACTADGKVYVYDLNVN 668
+ VF DG + ++DL N
Sbjct: 188 QGTQVFIG-GIDGAIKIWDLRNN 209
>SPBC83.03c |tas3||RITS complex subunit 3 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 549
Score = 27.9 bits (59), Expect = 5.6
Identities = 30/115 (26%), Positives = 46/115 (40%), Gaps = 6/115 (5%)
Query: 286 RKQREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIH--DEQLAQRIREAWTILERLVNQ 343
RK E +KP ++ R K + +I D + I E+ + L ++
Sbjct: 138 RKNSVTEFEKPIETKKSKHRKSRNKFLDKSSGSMEIESWDNSTSDSIIESSSRLHESISL 197
Query: 344 NIYDDIAQDYRY--WDDPSDEFREGMGSLLPLWRFQFEPMRSHAVCDVQWNPHYQ 396
D + D + WDD S FRE SL F + S++ D Q+ P YQ
Sbjct: 198 RENDIRSSDSKSVGWDDNSTGFRESSKSLDHTDTSMFMELDSNS--DPQFRPKYQ 250
>SPAC11E3.05 |||ubiquitin-protein ligase E3|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1323
Score = 27.9 bits (59), Expect = 5.6
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 637 AVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKY 670
AV D+ W + V A C+ D V+ +DL ++
Sbjct: 324 AVTDMNWHRQNPDVLATCSIDSSVHCWDLRSPRF 357
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.9 bits (59), Expect = 5.6
Identities = 27/133 (20%), Positives = 48/133 (36%), Gaps = 7/133 (5%)
Query: 555 ICFHPEKPDIFMVGTEDG---MIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYAS 611
I +HP +D +I T L+ + GH +++ + + S
Sbjct: 219 IAWHPNNATRLATAIDDNRNPIILTWDLRQPTVPQNILTGHQKAALSLSWCPEDPTFLLS 278
Query: 612 CSGDWRVKIWEDGREEPLFMF-ELGAAVGDVKWAPYSSTVFAACTADGKVYVYDL---NV 667
D R +W E L F G W P +S A + +GKV ++ + N
Sbjct: 279 SGKDGRAMVWNVETGESLGSFPRSGNWYTKSSWCPSNSNRVAVASLEGKVSIFSIQSTNT 338
Query: 668 NKYRPICVQAVVS 680
+K + ++ S
Sbjct: 339 DKSQEASIKGATS 351
>SPBP8B7.20c |||RNA methyltransferase Nop2 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 608
Score = 27.9 bits (59), Expect = 5.6
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 185 VEGPHEPEPVADDLEATAGDVGEEPEGDEKDESKDTGEEVLEIKP 229
+E EP+ AD+ D +E EG+E+D D+ EE E+KP
Sbjct: 81 LEHDEEPQTFADEF---IDDEAKECEGEEEDSVFDSDEE-HEVKP 121
>SPAC23H3.05c |swd1||COMPASS complex subunit
Swd1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 398
Score = 27.9 bits (59), Expect = 5.6
Identities = 36/192 (18%), Positives = 78/192 (40%), Gaps = 17/192 (8%)
Query: 587 RSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPY 646
R + GH + + ++ + + + S DW+ +W+ ++ L A V P+
Sbjct: 60 RVLTGHTRAIQSVCWSSCDRFLLTA-SRDWKCILWDLRDGSIVYQVVLSAPVWSASLHPH 118
Query: 647 SSTVFAACTAD--GKVYVYDLNVNKYRPICVQAVVSK-------KTKKLTRID-FNTRLP 696
F A D ++ + D + K++ + + + ++K +T + F+
Sbjct: 119 KINTFVASLLDESPQLIIVDDGIPKHKYLPTNPDIDENYSDRRNRSKHVTLVSFFHPSGE 178
Query: 697 VIVCGDTKGTCHVL-----KLSPNLRVMCKPPKKAQ-GVDQRTLQIMKLDKLLSLVRDPP 750
I+ G +KG HV+ K+ + R+ + K+ + +R L D+++ V
Sbjct: 179 YILSGTSKGWFHVIDASTTKIRSSHRITSQSIKQIRLSFCKRFLIFNSTDRVIRTVSIQD 238
Query: 751 YQTGVVDEKFDD 762
V+ KF D
Sbjct: 239 LDNPEVEHKFQD 250
>SPAC1783.05 |hrp1|chd1|ATP-dependent DNA helicase
Hrp1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1373
Score = 27.5 bits (58), Expect = 7.4
Identities = 10/43 (23%), Positives = 25/43 (58%)
Query: 287 KQREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQR 329
++RE+ E++ + + D+ + K+T K + QQ +E + ++
Sbjct: 969 EERERREEEERENDEDHPSRTYKRTTKSITKRQQRREEMVREK 1011
>SPCC10H11.02 |cwf23|SPCP31B10.01|DNAJ domain protein
Cwf23|Schizosaccharomyces pombe|chr 3|||Manual
Length = 289
Score = 27.5 bits (58), Expect = 7.4
Identities = 12/56 (21%), Positives = 27/56 (48%)
Query: 244 AALTYNFPRRSVDTQTIPPPRANYGSTALQCIIFDYYQEDYARKQREKEEDKPKRH 299
+A+ P + D Q + PP++N + + + Y+E + ++K + K K +
Sbjct: 224 SAINAEKPSKIYDVQWLKPPKSNSNTPTEKDTTVEDYEEITIMRMKQKHKQKQKEN 279
>SPAC18B11.10 |tup11||transcriptional corepressor
Tup11|Schizosaccharomyces pombe|chr 1|||Manual
Length = 614
Score = 27.5 bits (58), Expect = 7.4
Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 568 GTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW 621
G++D + L+ ++Y+ + QGH V + ++ +AS SGD R +IW
Sbjct: 556 GSKDRSMQFWDLQTGQSYL-TCQGHKNSVISVCFSPDGRQ-FASGSGDLRARIW 607
>SPBC3D6.08c |||mRNA decapping complex subunit |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 140
Score = 27.1 bits (57), Expect = 9.7
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 302 DNLKQLRKKTAKHVKSAQQIHDEQLAQRIRE 332
D +KQLR+ A+ + ++H+E+ + IRE
Sbjct: 90 DAVKQLRRMPAEELYPLAKLHEEEKKKNIRE 120
>SPAC26H5.05 |||IPT/TIG ankyrin repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1151
Score = 27.1 bits (57), Expect = 9.7
Identities = 10/23 (43%), Positives = 16/23 (69%), Gaps = 1/23 (4%)
Query: 482 DKHSNIVWEVRWGARLID-GEST 503
D H ++ W +RW +RL+ G+ST
Sbjct: 1069 DHHKSVWWSLRWQSRLVGRGKST 1091
>SPAC17D4.01 |pex7|SPAC1834.12|peroxin-7 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 308
Score = 27.1 bits (57), Expect = 9.7
Identities = 23/113 (20%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 564 IFMVGTEDGMIHTCSLKYNRNYVRSVQ-GHHMPVYRINYNYFNNSIYASCSGDWRVKIWE 622
I + G+ DG I L N V+++ G + + + +Y + ++ S D K W+
Sbjct: 118 IVVTGSWDGTIKLW-LGNLPNSVQTLNNGSNSRILTVATHYSSPNLLGYTSSDGLCKFWD 176
Query: 623 DGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICV 675
+ E+ + + W+ + + + VY YD+ N P+ V
Sbjct: 177 FRSSDKFMSIEIPNQITCMNWSKSNHRMVYTADNNNLVYCYDI-ANLKTPLSV 228
>SPAC212.11 |tlh1||RecQ type DNA helicase|Schizosaccharomyces
pombe|chr 1||Partial|Manual
Length = 1887
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 196 DDLE-ATAGDVGEEPEGDEKDESKDTGEEVLEIKPRVKKLAN-QFNF 240
DD++ AT + E DEKD ++ EE+ + R K L N QFN+
Sbjct: 346 DDVDQATDNNTNTILEDDEKDNDEEEEEEI--VNAREKNLLNQQFNW 390
>SPAC343.04c |gnr1||heterotrimeric G protein beta subunit
Gnr1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 507
Score = 27.1 bits (57), Expect = 9.7
Identities = 17/68 (25%), Positives = 30/68 (44%), Gaps = 1/68 (1%)
Query: 556 CFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGD 615
CF + + G+ED I + + + ++ GH V + YN + +AS D
Sbjct: 434 CFGGKDDTFVLSGSEDDKIRIWHRESGK-LLATLSGHVKCVNYVAYNPVDPYQFASAGDD 492
Query: 616 WRVKIWED 623
V+IW +
Sbjct: 493 NTVRIWSN 500
>SPBCPT2R1.08c |tlh2||RecQ type DNA helicase
Tlh1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1919
Score = 27.1 bits (57), Expect = 9.7
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 4/47 (8%)
Query: 196 DDLE-ATAGDVGEEPEGDEKDESKDTGEEVLEIKPRVKKLAN-QFNF 240
DD++ AT + E DEKD ++ EE+ + R K L N QFN+
Sbjct: 346 DDVDQATDNNTNTILEDDEKDNDEEEEEEI--VNAREKNLLNQQFNW 390
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.319 0.136 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,679,672
Number of Sequences: 5004
Number of extensions: 163492
Number of successful extensions: 560
Number of sequences better than 10.0: 52
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 501
Number of HSP's gapped (non-prelim): 91
length of query: 763
length of database: 2,362,478
effective HSP length: 78
effective length of query: 685
effective length of database: 1,972,166
effective search space: 1350933710
effective search space used: 1350933710
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 57 (27.1 bits)
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