Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001942-TA|BGIBMGA001942-PA|IPR002052|N-6
Adenine-specific DNA methylase, IPR001680|WD-40 repeat,
IPR011046|WD40-like
(763 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_20145| Best HMM Match : WD40 (HMM E-Value=2.4e-09) 202 1e-51
SB_51892| Best HMM Match : WD40 (HMM E-Value=8.7e-14) 112 1e-24
SB_20706| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 6e-12
SB_10356| Best HMM Match : WD40 (HMM E-Value=6e-10) 68 2e-11
SB_51692| Best HMM Match : WD40 (HMM E-Value=0.24) 63 7e-10
SB_44767| Best HMM Match : WD40 (HMM E-Value=0.074) 58 3e-08
SB_34027| Best HMM Match : No HMM Matches (HMM E-Value=.) 58 3e-08
SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 8e-04
SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 0.001
SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36) 41 0.004
SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22) 40 0.007
SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.010
SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30) 38 0.023
SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22) 38 0.023
SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.023
SB_57418| Best HMM Match : WD40 (HMM E-Value=4.5e-15) 38 0.040
SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.052
SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.069
SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.069
SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.) 37 0.069
SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.092
SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.) 36 0.16
SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10) 36 0.16
SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.21
SB_54574| Best HMM Match : WD40 (HMM E-Value=0) 35 0.21
SB_45648| Best HMM Match : WD40 (HMM E-Value=2.4e-14) 35 0.28
SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.28
SB_20681| Best HMM Match : WD40 (HMM E-Value=3.1e-16) 34 0.49
SB_23517| Best HMM Match : WD40 (HMM E-Value=0) 33 0.85
SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 1.5
SB_53409| Best HMM Match : WD40 (HMM E-Value=4.7) 32 1.5
SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25) 32 2.0
SB_40414| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 2.0
SB_25576| Best HMM Match : WD40 (HMM E-Value=1.6e-30) 31 2.6
SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1) 31 3.4
SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0) 31 3.4
SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.4
SB_40185| Best HMM Match : WD40 (HMM E-Value=0) 31 4.6
SB_42442| Best HMM Match : Keratin_B2 (HMM E-Value=0.88) 30 6.0
SB_31972| Best HMM Match : RVT_1 (HMM E-Value=2.4e-14) 30 6.0
SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0) 30 6.0
SB_24255| Best HMM Match : Herpes_PAP (HMM E-Value=2) 30 6.0
SB_37482| Best HMM Match : WD40 (HMM E-Value=1.1e-05) 30 8.0
SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.0
SB_33677| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.0
SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10) 30 8.0
SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.0
SB_15615| Best HMM Match : SAMP (HMM E-Value=0.06) 30 8.0
SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.0
>SB_20145| Best HMM Match : WD40 (HMM E-Value=2.4e-09)
Length = 682
Score = 202 bits (492), Expect = 1e-51
Identities = 104/235 (44%), Positives = 143/235 (60%), Gaps = 4/235 (1%)
Query: 489 WEVRWGARLIDGESTFFSISGDGRVVQWAVMPGELQATTIITLTSNVPP-IPGPDGTMIN 547
++V+W +D FFS+S DGRVVQW ++ EL T II L +P GP+GT I
Sbjct: 365 FQVKWQKDDLDNNLNFFSVSSDGRVVQWTIVKSELSHTDIINL--ELPEKSEGPEGTQIK 422
Query: 548 VNSCGSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNS 607
CG+ FH +F+VGTE+G IH CS Y Y+ + + R + +
Sbjct: 423 SLGCGTSFDFHKTINYLFLVGTEEGKIHKCSKTYTSTYLDTFDSGGIRFTRRPSSPAAQT 482
Query: 608 IYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNV 667
S G R+ EP+F F+L ++VGDV+WAPY+STVFAACTADGK++VYDLNV
Sbjct: 483 -GQSRYGTTRICKLTHTLLEPMFTFDLNSSVGDVQWAPYASTVFAACTADGKIHVYDLNV 541
Query: 668 NKYRPICVQAVVSKKTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVMCKP 722
NKY P+C Q+VV+KK KLT + FN P+++ GD++G + LK+SPNLR +P
Sbjct: 542 NKYEPLCEQSVVAKKKSKLTHLAFNPDHPILIVGDSRGYVNSLKVSPNLRKATQP 596
Score = 114 bits (275), Expect = 2e-25
Identities = 70/186 (37%), Positives = 98/186 (52%), Gaps = 28/186 (15%)
Query: 208 EPEGDEKDESKDTGEEVLEI--KPRVKKLANQFNFCERAALTYNFPRRSVDTQTIPPPRA 265
E E ++ DE K E ++ + +KL NQFNF ERA+ TYN P R
Sbjct: 116 EEEKEKTDEEKPRSESIIGTGSSKKEQKLTNQFNFSERASQTYNNPYRWE---------- 165
Query: 266 NYGSTALQCIIFDYYQEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQ 325
I+D Y ED R+++ KE++ K + + +KK + I
Sbjct: 166 ----------IYDAYVEDLERQEKIKEKESRKTQTLKKEEDKKKKLTQVEMQGDDI---- 211
Query: 326 LAQRIREAWTILERLVNQNIYDDIAQDYRYWDDPSDEFREGMGSLLPLWRFQFEPMRSHA 385
RI + I+ER+VNQN YDDIAQD++YW+DPSDEFRE G+LLPLW+F +E + A
Sbjct: 212 --TRISKPAQIVERMVNQNTYDDIAQDFKYWEDPSDEFREPDGTLLPLWKFSWEKSKRLA 269
Query: 386 VCDVQW 391
V + W
Sbjct: 270 VTSLCW 275
Score = 58.8 bits (136), Expect = 2e-08
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 37 IEDEALEWLKPRALIKPDDQEDVPEADLDEEVGRVLTTINPNWVADEVAYHYGLGRFVAK 96
I D+ EW++P+ LIKPDDQ ++ EA+L EE R+LT NP+ ++ V Y + + K
Sbjct: 4 IGDDMDEWMQPKQLIKPDDQLELSEAELKEEFTRILTANNPHAPSNIVRYSFKERCY--K 61
Query: 97 PKPTFGKAYPLYIYQGTAIRKDSEEAKAQ 125
+ + + G + KDS+EA+ Q
Sbjct: 62 QTSSVDQLAIHFALDGNMLHKDSDEARRQ 90
Score = 52.0 bits (119), Expect = 2e-06
Identities = 21/61 (34%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 430 YAVVTDSPVICLDVYKETPYLICVGLYDGNVCVYNAQLTLESSYQYKSDSVRDKHSNIVW 489
Y + T+S V+CLD++ E P+++ G YDG+V VY+ + ++S + KH++ VW
Sbjct: 276 YGIKTESGVMCLDIHPEHPHMLAAGFYDGSVAVYSISEKMNKPL-HQSTAKTGKHTDPVW 334
Query: 490 E 490
+
Sbjct: 335 Q 335
>SB_51892| Best HMM Match : WD40 (HMM E-Value=8.7e-14)
Length = 353
Score = 112 bits (269), Expect = 1e-24
Identities = 73/238 (30%), Positives = 116/238 (48%), Gaps = 34/238 (14%)
Query: 506 SISGDGRVVQWAVMPG----ELQATTIITLTSNVPPIPGPD---GTMINVNSCGSCICFH 558
SIS DGRV +W++ G +L I +T G + +I+ + G C F
Sbjct: 21 SISADGRVTKWSIRKGFESADLMKLKRINVTKQKAGGGGSERKSDALISRFAAGFCFDFS 80
Query: 559 PEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRV 618
P +I++ GTE+G +H CS YN Y+ S GH P+Y++ +N + +CS DW V
Sbjct: 81 PNDANIYLAGTEEGHVHKCSCSYNEQYLESFHGHTGPIYQVKWNPLYPEAFLTCSADWSV 140
Query: 619 KIWEDGREEPLFMF-----------------ELGA-----AVGDVKWAPYSSTVFAACTA 656
++W R+ P+ F +G +V D+ W+P +T+F AC
Sbjct: 141 RLWHCDRQFPVMSFLSSTVSTRLYSVSSRIYSVGTQIYSKSVNDISWSPDCATLF-ACVN 199
Query: 657 DGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDF--NTRLPVIVCGDTKGTCHVLKL 712
D V ++DL++N P V + V + KLT + F NT + I+ GD++G V +L
Sbjct: 200 DRAVEIWDLSLNTLDP--VVSFVPVQDCKLTTVLFALNTAMQTILVGDSEGQVTVYQL 255
>SB_20706| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 588
Score = 70.1 bits (164), Expect = 6e-12
Identities = 97/464 (20%), Positives = 190/464 (40%), Gaps = 51/464 (10%)
Query: 286 RKQREKEEDKPKRHPIDNLKQLRKKTAKH------VKSAQQIHDEQL-AQRIREAWTILE 338
+ ++E+EE KPK ++ + +KT +H ++ +++ D+ L +Q +
Sbjct: 135 KDEKEEEEVKPKPIQQESQPETEEKTEQHKEEEVVIELSEEQKDQILGSQEFSRFFDKAV 194
Query: 339 RLVNQNIYDDIAQDYRYWDDPSDEFREGMGSL--LPLWRFQFEPM--RSHAVCDVQWNPH 394
RLV + + +D+ Y D+ G + L L R ++ R V + W+
Sbjct: 195 RLVERALTEDLDITIDYSGAEGDDLEGGSQAARELTLSRDFYDERWSRHRTVTCLDWSNQ 254
Query: 395 YQDLFAVAYGSLDFTSQQKTGCLCLYSIK-NPAYPEYAVVTDSPVICLDVYKETPYLICV 453
Y +L +Y + + + G ++++K PEY S V+ K P LI
Sbjct: 255 YPELLVASYNNNEDAPHEPDGVALIWNLKFAKTTPEYIFHCQSAVMSATFAKFHPNLIIG 314
Query: 454 GLYDGNVCVYNAQLTLESSYQYKSDSVRDKHSNIVWEVRWGARLIDGESTFFSISGDGRV 513
G Y G + +++ + + + Q ++ H++ V+ V S+S DG++
Sbjct: 315 GTYSGQIVLWDNRSSKRTPVQ-RTPLSATAHTHPVYCVNVVG--TQNAHNLISVSTDGKM 371
Query: 514 VQWAVMPGELQATTIITLTSNVPPIPGPDGTMINVNSCGSCICFHPEKPDIFMVGTEDGM 573
W++ +++ + + + V +C+ F + F+VG+E+G
Sbjct: 372 CSWSL--------DMLSQPQDSMELQYKQSKSVAV----TCMSFLAGDVNNFVVGSEEGT 419
Query: 574 IHTCSLKYNRNYVRSV-QGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMF 632
++T ++ + V +GH+ PV I+ + S SG P + F
Sbjct: 420 VYTACRHGSKAGISDVFEGHYGPVTGIDTH--------SASGP---------SPRPYYSF 462
Query: 633 E-LGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDF 691
E G + DVKW+P +FA G++ +++LN + PI + ++ L + +
Sbjct: 463 EDNGDYIYDVKWSPIHPALFATVDGTGRLDLWNLNSDTEVPIA--STATESLTALNNVQW 520
Query: 692 NTRLPVIVCGDTKGTCHVLKLSPNLRVMCKPPKKAQGVDQRTLQ 735
I GD G ++ + L P QRTLQ
Sbjct: 521 TQSGQQISVGDDDGRVYIYDVGEQL---ATPRNDEWSRLQRTLQ 561
>SB_10356| Best HMM Match : WD40 (HMM E-Value=6e-10)
Length = 283
Score = 68.1 bits (159), Expect = 2e-11
Identities = 51/213 (23%), Positives = 98/213 (46%), Gaps = 22/213 (10%)
Query: 506 SISGDGRVVQWAVMPGELQATTIITLTSNVPPIPGPDGTMINVNSCGSCICFHPEKPDIF 565
S SGDG+V+ W V P E Q ++ G ++ + + K D+
Sbjct: 71 SASGDGKVLLWQVPPIESQDLRLV------------GGYILQTGAVPRSLRTSKAKGDME 118
Query: 566 MVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGR 625
M G + T S+ + H PV+ +N + ++ +++ +C D ++++ +
Sbjct: 119 M-----GDV-TSSVPLGSPVTFAFAPHVGPVFSVNCSPYHRNLFLTCGTDGTIRLYTMLQ 172
Query: 626 EEPLFMFELGAA-VGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTK 684
+PL E A + ++W+P VF+ T DG++ +YD+ VN P+ V K K
Sbjct: 173 AKPLLSLEPAAGYLFAIRWSPVRPLVFSVATGDGRLLIYDMKVNHINPVTTIDVSDK--K 230
Query: 685 KLTRIDFNT-RLPVIVCGDTKGTCHVLKLSPNL 716
+ +++N R ++ GD++G + +LS L
Sbjct: 231 PVHTLEYNIHRRQLVATGDSEGVIKIWRLSDEL 263
>SB_51692| Best HMM Match : WD40 (HMM E-Value=0.24)
Length = 191
Score = 63.3 bits (147), Expect = 7e-10
Identities = 58/196 (29%), Positives = 90/196 (45%), Gaps = 41/196 (20%)
Query: 595 PVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMF-----------------ELGA- 636
P+Y++ +N + +CS DW V++W R+ P+ F +G
Sbjct: 2 PIYQVKWNPLYPEAFLTCSADWSVRLWHCDRQFPVMSFLSSTVSTRLYSVSSRIYSVGTQ 61
Query: 637 ----AVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDF- 691
+V D+ W+P +T+F AC D V ++DL +N P V + V + KLT + F
Sbjct: 62 IYSKSVNDISWSPDCATLF-ACVNDRAVEIWDLRLNTLDP--VVSFVPVQDCKLTTVLFA 118
Query: 692 -NTRLPVIVCGDTKGTCHVLKLSPNLRVMCKPPKKAQGVDQRTLQIMKLD---KLLSLVR 747
NT + I+ GD++G V + LR M A G+D + QI K+D LLS +
Sbjct: 119 LNTAMQTILVGDSEGQVTVYQ----LRGM------APGIDPQVTQI-KIDTQASLLSKIM 167
Query: 748 DPPYQTGVVDEKFDDD 763
+Q G K DD
Sbjct: 168 STAFQVGSSPSKQKDD 183
>SB_44767| Best HMM Match : WD40 (HMM E-Value=0.074)
Length = 532
Score = 58.0 bits (134), Expect = 3e-08
Identities = 32/85 (37%), Positives = 49/85 (57%), Gaps = 7/85 (8%)
Query: 453 VGLYDGNVCVYNAQLTLESSYQYKSDSVRDKHSNIVWEVRW-----GARLIDGESTFFSI 507
VGLYDG + +YN + T +S S+SV KH++ VW+++W G + + SI
Sbjct: 417 VGLYDGTIAIYNIRCTDDSPALDSSESV-GKHTSPVWQLQWVDREQGGNGDEHDEILVSI 475
Query: 508 SGDGRVVQWAVMPG-ELQATTIITL 531
S DGRV +W++ G E AT + +L
Sbjct: 476 SADGRVTKWSIRKGFESSATNVSSL 500
>SB_34027| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 223
Score = 57.6 bits (133), Expect = 3e-08
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 11/156 (7%)
Query: 309 KKTAKHVKSAQQIHDEQLAQRIREAWTILERLVNQNIYDDIAQDYRYWDDPSDEFREGMG 368
++T ++ K ++ DE I++ ++E + QN DI +DY + D D+ E
Sbjct: 74 EQTIRYRKKVEK--DEIYMNTIQQLGNVMEHCIKQNNAIDIYEDY-FPDLEEDQSCE-TP 129
Query: 369 SLLPLWRFQFEPMRSHAVCDVQWNPHYQDLFAVAYGSLDFTSQQKTGCLCL----YSIKN 424
S + F+ E + W P AVAY L+F QK+ +C+ + I N
Sbjct: 130 SAKTINVFRDENNIKRTATSISWYPDGTQKLAVAYSVLEF---QKSTDICMDSYIWDIDN 186
Query: 425 PAYPEYAVVTDSPVICLDVYKETPYLICVGLYDGNV 460
P P+ + SP+ICL+ + P+L+ G Y+G +
Sbjct: 187 PTKPDMVLKPVSPLICLEYNPKDPHLLIGGCYNGQL 222
>SB_30239| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 525
Score = 43.2 bits (97), Expect = 8e-04
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 589 VQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW--------EDGREEPLFMFELG--AAV 638
V GH PV + +N F++++ AS S D +KIW ED E G V
Sbjct: 82 VNGHTRPVLDLGWNPFDDNVIASASEDCSIKIWYIPDCGLCEDLNREDFIGHLQGHDRKV 141
Query: 639 GDVKWAPYSSTVFAACTADGKVYVYDL 665
G ++W P +S + A+ D + ++D+
Sbjct: 142 GIIRWHPCASNIIASAGFDDVIIIWDV 168
>SB_4649| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 475
Score = 42.7 bits (96), Expect = 0.001
Identities = 31/133 (23%), Positives = 56/133 (42%), Gaps = 15/133 (11%)
Query: 553 SCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASC 612
+C+ F+P I G+ D + L+ + + S + H ++++ ++ N +I AS
Sbjct: 325 NCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASS 384
Query: 613 SGDWRVKIW--------------EDGREEPLFMF-ELGAAVGDVKWAPYSSTVFAACTAD 657
D R+ +W EDG E LF+ A + D W P V + + D
Sbjct: 385 GTDRRLHVWDLSKIGEEQSAEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWVLCSVSED 444
Query: 658 GKVYVYDLNVNKY 670
+ V+ + N Y
Sbjct: 445 NIMQVWQMAENIY 457
>SB_48737| Best HMM Match : WD40 (HMM E-Value=1.5e-36)
Length = 885
Score = 40.7 bits (91), Expect = 0.004
Identities = 19/65 (29%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 602 NYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGA-AVGDVKWAPYSSTVFAACTADGKV 660
+++ + +A+C G+ +V IW++GR EP+ F G + VK+ P + + A+ +D +
Sbjct: 234 HHWKDKTFATC-GE-QVDIWDEGRAEPVRSFTWGVDTIHSVKFNPVETHILASTASDRSI 291
Query: 661 YVYDL 665
+YD+
Sbjct: 292 VLYDM 296
Score = 35.5 bits (78), Expect = 0.16
Identities = 15/70 (21%), Positives = 30/70 (42%)
Query: 596 VYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVFAACT 655
++ + +N I AS + D + +++ PL + + W P + +F A
Sbjct: 269 IHSVKFNPVETHILASTASDRSIVLYDMRGSTPLRKLVMEMRSNTIAWNPIEAYMFTAAN 328
Query: 656 ADGKVYVYDL 665
D +Y YD+
Sbjct: 329 EDSNLYTYDM 338
>SB_57808| Best HMM Match : WD40 (HMM E-Value=2.5e-22)
Length = 195
Score = 39.9 bits (89), Expect = 0.007
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 5/78 (6%)
Query: 575 HTCSLKY---NRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGR-EEPLF 630
H+ +KY N N V+ + H PV ++++ +N YASC+ D VKIW+ R E
Sbjct: 92 HSGIVKYWQSNMNNVQMYEAHKEPVRGLSFSPTDNK-YASCADDGLVKIWDFYRCMEEKT 150
Query: 631 MFELGAAVGDVKWAPYSS 648
+ GA V + W P+ S
Sbjct: 151 LRGHGADVKCIDWHPHKS 168
>SB_44544| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1480
Score = 39.5 bits (88), Expect = 0.010
Identities = 20/84 (23%), Positives = 42/84 (50%), Gaps = 3/84 (3%)
Query: 585 YVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE-DGREEPLFMFELGAAVGDVKW 643
Y H+ PV+ ++++ + + A+ D VK+W+ G+ P+ + ++V +KW
Sbjct: 413 YYHQFMAHNGPVFTLDWHPEDRNWIATGGRDKCVKVWDVQGKATPVNNIQTISSVSRIKW 472
Query: 644 APYSSTVFAACT--ADGKVYVYDL 665
P A+C D ++V+D+
Sbjct: 473 RPQKKYQIASCALLVDFDIHVWDI 496
>SB_14111| Best HMM Match : WD40 (HMM E-Value=6.2e-30)
Length = 1093
Score = 38.3 bits (85), Expect = 0.023
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Query: 589 VQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE---DGREEPLFMFELGAAVGDVKWAP 645
+Q H V R+++N ++ ASCS D V++W+ +G F G AV DVKW+P
Sbjct: 200 IQAHTSGVNRLDWNPVYTNLLASCSMDNSVRVWDTYLNGICVKSHTFH-GGAVKDVKWSP 258
>SB_8639| Best HMM Match : WD40 (HMM E-Value=1.9e-22)
Length = 442
Score = 38.3 bits (85), Expect = 0.023
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 589 VQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE-------DGREEPLFMFELGA-AVGD 640
V GH V + +N F++ + A+ S D RV IW+ EPL E VG
Sbjct: 11 VIGHKGAVLDLAWNPFDDHMIATGSEDARVMIWQIPEHGLHSNISEPLVTLEYHQNRVGI 70
Query: 641 VKWAPYSSTVFAACTADGKVYVYDL 665
V+W P +S + + + D K+ +++L
Sbjct: 71 VRWHPVASNILLSSSHDLKIVIWNL 95
>SB_9384| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 468
Score = 38.3 bits (85), Expect = 0.023
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 589 VQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE-------DGREEPLFMFELGA-AVGD 640
V GH V + +N F++ + A+ S D RV IW+ EPL E VG
Sbjct: 75 VIGHKGAVLDLAWNPFDDHMIATGSEDARVMIWQIPEHGLHSNISEPLVTLEYHQNRVGI 134
Query: 641 VKWAPYSSTVFAACTADGKVYVYDL 665
V+W P +S + + + D K+ +++L
Sbjct: 135 VRWHPVASNILLSSSHDLKIVIWNL 159
>SB_57418| Best HMM Match : WD40 (HMM E-Value=4.5e-15)
Length = 365
Score = 37.5 bits (83), Expect = 0.040
Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 615 DWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNK 669
D V W G+ LF G + V+W P +VFAA +AD ++ ++DL V +
Sbjct: 256 DVNVISWNRGQPVALFKHSTGP-ITSVEWHPTDGSVFAASSADNQITLWDLAVER 309
>SB_34456| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 454
Score = 37.1 bits (82), Expect = 0.052
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 7/115 (6%)
Query: 541 PDGTMINV---NSCGSCIC-FHPEKP-DIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMP 595
P G +N ++ G C F+PE+ DI G +DG + ++ N + V GH
Sbjct: 31 PTGKPVNTLAGHTTGVWTCAFNPERTGDILCSGADDGSLKLWDIRSNSVVMSLVGGHDDR 90
Query: 596 VYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGA-AVGDVKWAPYSST 649
V ++ N AS S D RV +WE L AV V++ P+ ST
Sbjct: 91 VKSCAWSP-NGEYVASSSADGRVTLWEPRLGTALSKIRAHEDAVTHVEFYPFVST 144
>SB_33678| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1308
Score = 36.7 bits (81), Expect = 0.069
Identities = 24/117 (20%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 557 FHPEKPDIFMVGTEDG---MIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCS 613
+HP+ ++ +ED ++ L++ + ++ ++GH + I + + + SC+
Sbjct: 222 WHPDTATQMVIASEDDRYPVLQMWDLRFATSPMKVLEGHSRGILSIAWCPQDPDLLMSCA 281
Query: 614 GDWRVKIWEDGREEP--LFMFELGAAVG---DVKWAPYSSTVFAACTADGKVYVYDL 665
D R+ W + ++EL DVKW P + + + DG V + L
Sbjct: 282 KDNRILCWNPNEQTAGNEIVYELPTTAQWSFDVKWCPRNPAMICTSSFDGHVSCFSL 338
>SB_29024| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 998
Score = 36.7 bits (81), Expect = 0.069
Identities = 22/72 (30%), Positives = 32/72 (44%), Gaps = 1/72 (1%)
Query: 556 CFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGD 615
CF D G+ED ++ +K N + + GH V + +N S+ AS S D
Sbjct: 211 CFGGVNQDFLASGSEDHQVYIWHVK-NERPIAVLCGHTRTVNCVTWNPLVPSMMASASDD 269
Query: 616 WRVKIWEDGREE 627
V+IW EE
Sbjct: 270 GTVRIWGPSTEE 281
Score = 32.7 bits (71), Expect = 1.1
Identities = 26/93 (27%), Positives = 41/93 (44%), Gaps = 4/93 (4%)
Query: 574 IHTCSLKYNRNYVRSVQGHHMPVYRIN--YNYFNNSIYASCSGDWRVKIWEDGREEPL-F 630
+H ++K +R R QG Y I+ + N AS S D +V IW E P+
Sbjct: 184 LHLWNIK-DRVLERKYQGVTQGFYTIHSCFGGVNQDFLASGSEDHQVYIWHVKNERPIAV 242
Query: 631 MFELGAAVGDVKWAPYSSTVFAACTADGKVYVY 663
+ V V W P ++ A+ + DG V ++
Sbjct: 243 LCGHTRTVNCVTWNPLVPSMMASASDDGTVRIW 275
>SB_19094| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 362
Score = 36.7 bits (81), Expect = 0.069
Identities = 19/84 (22%), Positives = 38/84 (45%), Gaps = 4/84 (4%)
Query: 586 VRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVK--- 642
+R+++GH V ++ + ++ S S D V +W+ + P +
Sbjct: 122 IRTLKGHSDFVLGVDCSGTEKDLFLSASRDGSVVLWDTRKPRPAKRLADPTQYDSIPCCL 181
Query: 643 -WAPYSSTVFAACTADGKVYVYDL 665
W+P S++FA DG ++VY +
Sbjct: 182 DWSPLDSSIFATGFEDGSIHVYSI 205
Score = 35.9 bits (79), Expect = 0.12
Identities = 22/72 (30%), Positives = 32/72 (44%)
Query: 549 NSCGSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSI 608
+S C+ + P IF G EDG IH S+K + S H V R+ ++ +
Sbjct: 175 DSIPCCLDWSPLDSSIFATGFEDGSIHVYSIKDTTKIIFSYTPHGRAVNRVAFSPRSPEW 234
Query: 609 YASCSGDWRVKI 620
AS S D V +
Sbjct: 235 LASVSDDTLVHV 246
>SB_19258| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 459
Score = 36.3 bits (80), Expect = 0.092
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 2/63 (3%)
Query: 592 HHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVF 651
HH PVY I+++ + AS S D RV IW + F+ + +V+W+P +
Sbjct: 332 HHEPVYTISFSP-DGRYLASGSFDKRVHIWSTQTGNLVHSFQGSGGIFEVQWSPRGDKL- 389
Query: 652 AAC 654
AAC
Sbjct: 390 AAC 392
Score = 35.9 bits (79), Expect = 0.12
Identities = 20/67 (29%), Positives = 36/67 (53%), Gaps = 4/67 (5%)
Query: 592 HHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFE-LGAAVGDVKWAPYSSTV 650
H P +++ NN+ +ASCS D + + G ++P+ F + V ++W P S T+
Sbjct: 228 HQAPTLDVDWQ--NNNSFASCSTDKLIHVCRLGLDKPIKSFRGHMSEVNAIRWDP-SGTL 284
Query: 651 FAACTAD 657
A+C+ D
Sbjct: 285 LASCSDD 291
>SB_24046| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2848
Score = 35.5 bits (78), Expect = 0.16
Identities = 21/82 (25%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 281 QEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIREAWTILERL 340
+++ R QRE++E++ +R D K+++ + + +K ++ +E+L +++RE +ER
Sbjct: 1543 EKEVIRLQRERDEERRRRE--DEEKRIQMEKVEELKRIEREKEEELERQMREKEEEMER- 1599
Query: 341 VNQNIYDDIAQDYRYWDDPSDE 362
Q D + Q+ R +D E
Sbjct: 1600 QKQVFQDTLEQERRLRNDREAE 1621
>SB_10949| Best HMM Match : WD40 (HMM E-Value=3.1e-10)
Length = 193
Score = 35.5 bits (78), Expect = 0.16
Identities = 22/88 (25%), Positives = 45/88 (51%), Gaps = 4/88 (4%)
Query: 580 KYNRNYVRSVQ-GHHMPVYRINYNYFNNSIYASCSGDWRVKIWE--DGREEPLFMFELGA 636
KY RN + S+ +H+ ++ +N + ++ A+ S D V+IW+ G +++ +
Sbjct: 25 KYTRNTIISLDLCNHLGASQVKWNKEDRNVLAT-SHDGDVRIWDLRKGNTPVVYITAHLS 83
Query: 637 AVGDVKWAPYSSTVFAACTADGKVYVYD 664
+ V W+ S T A C+ D V +++
Sbjct: 84 KIHGVDWSRTSGTALATCSNDASVKLWN 111
Score = 32.7 bits (71), Expect = 1.1
Identities = 17/83 (20%), Positives = 37/83 (44%), Gaps = 1/83 (1%)
Query: 569 TEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE-DGREE 627
+ DG + L+ V + H ++ ++++ + + A+CS D VK+W + +
Sbjct: 58 SHDGDVRIWDLRKGNTPVVYITAHLSKIHGVDWSRTSGTALATCSNDASVKLWNTENPRQ 117
Query: 628 PLFMFELGAAVGDVKWAPYSSTV 650
P + A V ++ P+ V
Sbjct: 118 PEAKLTVTAPVWRARYTPFGHGV 140
>SB_36694| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1803
Score = 35.1 bits (77), Expect = 0.21
Identities = 20/84 (23%), Positives = 44/84 (52%), Gaps = 3/84 (3%)
Query: 586 VRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAP 645
V +++GH + ++++ ++S+ AS + D +++W+ +F + V + W P
Sbjct: 1710 VAAMEGHESEIRVVSFSP-DDSLLASAALDQTIRVWDLSSYTQHHVFYTASGVWALTWHP 1768
Query: 646 YSSTVFAACTADGKVYVYDLNVNK 669
S + AA A G Y+Y + ++K
Sbjct: 1769 ISDDLLAAGDAVG--YLYFIRLHK 1790
>SB_54574| Best HMM Match : WD40 (HMM E-Value=0)
Length = 1050
Score = 35.1 bits (77), Expect = 0.21
Identities = 33/118 (27%), Positives = 53/118 (44%), Gaps = 9/118 (7%)
Query: 551 CGSCIC--FHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSI 608
CG+ C F + + GT D + + R + S+ GH V +++ ++ I
Sbjct: 510 CGAVYCCKFSSDSSKVVSCGT-DNHVKVWDSQSGRQLL-SISGHGDVVNCCAFSHDDSRI 567
Query: 609 YASCSGDWRVKIWEDGREEPLFMFELG--AAVGDVKWAPYSSTVFAACTADGKVYVYD 664
SCS D VKIW+ E + F +G V ++P T +C+AD V V+D
Sbjct: 568 I-SCSADQTVKIWDASSGEGVLCF-VGHTQEVFSCSFSP-DDTKAVSCSADRTVKVWD 622
>SB_45648| Best HMM Match : WD40 (HMM E-Value=2.4e-14)
Length = 316
Score = 34.7 bits (76), Expect = 0.28
Identities = 28/119 (23%), Positives = 53/119 (44%), Gaps = 8/119 (6%)
Query: 554 CICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSI-YASC 612
C+ F+PE G+ D +H L++ + +GH V +Y F NS S
Sbjct: 107 CVKFNPESRYHLSFGSADHCVHYYDLRHAAKPINVFKGHRKAV---SYTKFINSTEIVSA 163
Query: 613 SGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSST-VFAAC-TADGKVYVYDLNVNK 669
S D ++K+W + L F+ + + + +S + AC + + +Y+Y ++K
Sbjct: 164 STDSQLKLWNINKPHCLRTFK--GHINEKNFVGLASNGDYVACGSENNSLYLYYKGLSK 220
>SB_41093| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 586
Score = 34.7 bits (76), Expect = 0.28
Identities = 30/147 (20%), Positives = 56/147 (38%), Gaps = 3/147 (2%)
Query: 190 EPEPVADDLEATAGDVGEEPEGDEKDESKDTGEEVLEIKPRVKKLANQFNFCERAALTYN 249
E + ++++E D+ + E EKD K EE + KL QFN R +
Sbjct: 372 ECKETSEEIEQLKVDLAKYKEAAEKDLDKALSEERAKFTEEYAKLEKQFNDARREHMKAV 431
Query: 250 FPRRSVDTQTIPPPRANYGSTALQCIIFDYYQEDYARKQREKEEDKPKRHPI---DNLKQ 306
R + Q A + FD + + Y + + E+++ + LK
Sbjct: 432 VSLRQAERQLAREKEKGKEQIAQKQKDFDTHMDKYKARMKGVEQERNMLLATVRQEGLKP 491
Query: 307 LRKKTAKHVKSAQQIHDEQLAQRIREA 333
LR+ +H + + ++ Q + A
Sbjct: 492 LRQPMLQHSSGEESENADKENQEVPSA 518
>SB_20681| Best HMM Match : WD40 (HMM E-Value=3.1e-16)
Length = 91
Score = 33.9 bits (74), Expect = 0.49
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 7/84 (8%)
Query: 587 RSVQGHHMP-VYRINYNYFNNSIYASCSGDWRVKIW---EDGREEPLFMFEL-GAAVGDV 641
R + H ++ ++Y++ + A+CS D VK+W EDG ++ +V V
Sbjct: 5 REISADHKDLIHDVSYDFHGRRM-ATCSSDQSVKVWDLGEDGEWRCTANWKTHSGSVWKV 63
Query: 642 KWA-PYSSTVFAACTADGKVYVYD 664
WA P V A+C+ D V V++
Sbjct: 64 TWAHPEFGQVLASCSFDRTVAVWE 87
>SB_23517| Best HMM Match : WD40 (HMM E-Value=0)
Length = 860
Score = 33.1 bits (72), Expect = 0.85
Identities = 19/61 (31%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 568 GTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREE 627
G+EDG IH L + + H Y ++Y+ +S S S D VK+W + E
Sbjct: 800 GSEDGSIHFWDLIEAKLIFSLEKAHKGVAYSLSYHP-KDSCLLSASSDGEVKVWHEKEWE 858
Query: 628 P 628
P
Sbjct: 859 P 859
>SB_30344| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 418
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 610 ASCSGDWRVKIWEDGREEPLFMF-ELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVN 668
A+ SGD VKIW+ + E + F + AV W A+C+ D ++DLN
Sbjct: 219 ATSSGDGTVKIWDFSKAECVLTFADHTHAVWGCTWHS-KGDFLASCSMDNTSKIWDLNSE 277
Query: 669 KYR 671
+ R
Sbjct: 278 RCR 280
>SB_53409| Best HMM Match : WD40 (HMM E-Value=4.7)
Length = 42
Score = 32.3 bits (70), Expect = 1.5
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 627 EPLFMFELGAA-VGDVKWAPYSSTVFAACTADGKVYVYDL 665
+PL E A + ++W+P VF+ T DG++ +YD+
Sbjct: 2 KPLLSLEPAAGYLFAIRWSPVRPLVFSVATGDGRLLIYDM 41
>SB_17670| Best HMM Match : RVT_1 (HMM E-Value=6.1e-25)
Length = 1271
Score = 31.9 bits (69), Expect = 2.0
Identities = 28/101 (27%), Positives = 48/101 (47%), Gaps = 8/101 (7%)
Query: 199 EATAGDVGEEPEGDEKDESKDTGEEVLEIKPRVKKLANQFNFCERAALTYNFPRRSVDTQ 258
E +G+V P+ +E D+ + GE+ E++ R + A + R A ++ RS ++
Sbjct: 1072 ERRSGEV--RPDREESDQDCEDGEQ--ELQARNAEAAEKL---PRNASQHD-KSRSSNSV 1123
Query: 259 TIPPPRANYGSTALQCIIFDYYQEDYARKQREKEEDKPKRH 299
P R TA+ C + Q D A K++ K+ KRH
Sbjct: 1124 VGRPLRTKLPQTAVPCADQEIRQRDQAAKEKMKQYADNKRH 1164
>SB_40414| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 368
Score = 31.9 bits (69), Expect = 2.0
Identities = 20/85 (23%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 288 QREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIREAWTILERLVNQNIYD 347
+ +KE+++ + + K ++ T K S Q++ DE+ A+RI E + L + N+
Sbjct: 67 RNKKEQEQKEAEALKAAKAQKESTNKSKASIQEVTDEE-AKRIEEEEKRRKTLADTNV-- 123
Query: 348 DIAQDYRYWDDPSDEFREGMGSLLP 372
D ++D ++ +E + G + P
Sbjct: 124 DSSKDESKKEEDEEEDEDAKGKIKP 148
>SB_25576| Best HMM Match : WD40 (HMM E-Value=1.6e-30)
Length = 326
Score = 31.5 bits (68), Expect = 2.6
Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 605 NNSIYASCSGDWRVKIW-EDGREEPLFMFELGAAVGDVKWAPYSST 649
+ S+ ASCS D +++W RE + + + D+ WAP S+T
Sbjct: 142 HGSLIASCSNDQTIRVWVVASRECKCDLRDHDHVIEDLNWAPESAT 187
>SB_56336| Best HMM Match : Ag332 (HMM E-Value=5.1)
Length = 366
Score = 31.1 bits (67), Expect = 3.4
Identities = 27/143 (18%), Positives = 61/143 (42%), Gaps = 3/143 (2%)
Query: 192 EPVADDLEATAGDVGEEPEGDEKDESKDTGEEVLEIKPRVKKLANQFNFCERAALTYNFP 251
E + ++ G V EE +E DE + EE++E +P+ ++ + E
Sbjct: 222 EEIVEEEPKQEGPVEEETRQEEPDEKEREQEELVEEEPKKEEPVEEETKQEEPVEEEPKQ 281
Query: 252 RRSVDTQTIPPPRANYGSTALQCIIFDYYQEDYAR--KQREKEEDKPKRHPIDNLKQLRK 309
+VD + + + G + + + QE+ KQ E E++PK+ + ++
Sbjct: 282 EEAVDEEPKKEEQVD-GEPKQEEQVEELKQEEQIEEPKQEEPVEEEPKQEKPVEEEPKKE 340
Query: 310 KTAKHVKSAQQIHDEQLAQRIRE 332
+ + +++ +E L + + E
Sbjct: 341 EPVEEEPKQEELVEEDLKEAVYE 363
>SB_42598| Best HMM Match : CtaG_Cox11 (HMM E-Value=0)
Length = 1498
Score = 31.1 bits (67), Expect = 3.4
Identities = 22/94 (23%), Positives = 42/94 (44%), Gaps = 2/94 (2%)
Query: 566 MVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGR 625
+VGT G + + R +R V GH + I ++ ++ +A+C+ D + +W
Sbjct: 741 IVGTASGTLWYINWS-ERTSIRLVSGHAEQITNIVFSGSDDKYFATCAKDGVLHLWTTDN 799
Query: 626 EEPLFMFELGAAVGDVKWAPY-SSTVFAACTADG 658
E + +G + V + P +T + T DG
Sbjct: 800 LEHMQFQVVGQSCNCVAFCPIPPATPTKSLTNDG 833
>SB_31182| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1280
Score = 31.1 bits (67), Expect = 3.4
Identities = 28/84 (33%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Query: 183 EAVEGPHEPEPVADDLEATAGDVGEEPEGDEKDESKDTG-EEVLEIKPRVKKLANQFNFC 241
E + P E P+AD + G P DE D+ DTG EIK +K A
Sbjct: 297 EDLGSPQEKNPLADIISDIRKPDGYNPFFDEDDD--DTGLRSPQEIKLEIKTEAETTKNT 354
Query: 242 ERAALT--YNFPRRSVDTQTIPPP 263
+ A + YN P D T PPP
Sbjct: 355 KTAVVRPGYN-PFEDEDEATSPPP 377
>SB_40185| Best HMM Match : WD40 (HMM E-Value=0)
Length = 503
Score = 30.7 bits (66), Expect = 4.6
Identities = 34/142 (23%), Positives = 61/142 (42%), Gaps = 14/142 (9%)
Query: 534 NVPP---IPGPDGTMIN----VNSCGSCICFHPEKPDIFMVG-TEDGMIHTCSLKYNRNY 585
N PP IP P+ T V G + + F++ +ED I SL +
Sbjct: 59 NAPPLNRIPFPEMTASESRRLVGHSGPVFAVSIDHDNKFLLSCSEDKTIRLWSL-FTFTT 117
Query: 586 VRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAP 645
+ + +GH+ PV+ + + +AS S D ++W ++PL +F V DV
Sbjct: 118 LVAYRGHNYPVWDVQFCP-RGHYFASTSHDRTARLWSTDHQQPLRIF--AGHVSDVNKVA 174
Query: 646 Y--SSTVFAACTADGKVYVYDL 665
+ + A ++D V ++D+
Sbjct: 175 FHPNCNYIATGSSDRTVRLWDI 196
>SB_42442| Best HMM Match : Keratin_B2 (HMM E-Value=0.88)
Length = 274
Score = 30.3 bits (65), Expect = 6.0
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 611 SCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKY 670
SCSGD + +W D G ++ DV W ST +C+ D + V+D++ + Y
Sbjct: 113 SCSGDSLLDVW-DVSPSTYPPSCSGDSLLDV-WDVSPSTYPPSCSGDSLLDVWDISPSTY 170
Query: 671 RPIC 674
P C
Sbjct: 171 PPSC 174
Score = 30.3 bits (65), Expect = 6.0
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 611 SCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKY 670
SCSGD + +W D G ++ DV W ST +C+ D + V+D++ + Y
Sbjct: 153 SCSGDSLLDVW-DISPSTYPPSCSGDSLLDV-WDVSQSTYPPSCSGDSLLDVWDISPSTY 210
Query: 671 RPIC 674
P C
Sbjct: 211 PPSC 214
Score = 29.9 bits (64), Expect = 8.0
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
Query: 611 SCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKY 670
SCSGD + +W D G ++ DV W ST +C+ D + V+D++ + Y
Sbjct: 193 SCSGDSLLDVW-DISPSTYPPSCSGDSLLDV-WDVSRSTYPPSCSGDSPLDVWDVSQSTY 250
Query: 671 RPIC 674
P C
Sbjct: 251 PPSC 254
>SB_31972| Best HMM Match : RVT_1 (HMM E-Value=2.4e-14)
Length = 1242
Score = 30.3 bits (65), Expect = 6.0
Identities = 28/98 (28%), Positives = 44/98 (44%), Gaps = 7/98 (7%)
Query: 203 GDVGE-EPEGDEKDESKDTGEEVLEIKPRVKKLANQFNFCERAALTYNFPRRSVDTQTIP 261
G GE P+ +E D+ + GE+ E++ R + A + R A ++ RS
Sbjct: 1044 GRSGEVRPDREESDQDCEDGEQ--ELQARNAEAAEKL---PRHASQHD-KSRSATALFGR 1097
Query: 262 PPRANYGSTALQCIIFDYYQEDYARKQREKEEDKPKRH 299
P R TA+ C + Q D A K++ K+ KRH
Sbjct: 1098 PLRTKLPQTAVPCADQEIRQRDQAAKEKMKQYADNKRH 1135
>SB_25894| Best HMM Match : Coatomer_WDAD (HMM E-Value=0)
Length = 1066
Score = 30.3 bits (65), Expect = 6.0
Identities = 12/22 (54%), Positives = 16/22 (72%), Gaps = 1/22 (4%)
Query: 553 SCICFHPEKPDIFMVGTEDGMI 574
SC+ FHPE P I + G+EDG +
Sbjct: 131 SCVGFHPELP-IILTGSEDGTV 151
>SB_24255| Best HMM Match : Herpes_PAP (HMM E-Value=2)
Length = 919
Score = 30.3 bits (65), Expect = 6.0
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 79 WVADEVAYHYGLGRFVAKPKPTFGKAYPLYIYQGTA 114
WV + Y LGR P+ ++YP + Y G+A
Sbjct: 827 WVQNRTLYINALGRVPRDPRTNLSRSYPDFSYYGSA 862
>SB_37482| Best HMM Match : WD40 (HMM E-Value=1.1e-05)
Length = 433
Score = 29.9 bits (64), Expect = 8.0
Identities = 19/83 (22%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 627 EPLFMFELGA-AVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKK 685
E +++FE + + + + P +T +C+ DG + DL V + + ++ + TKK
Sbjct: 185 EGVYLFEPHSNVIPSLAFDPDDTTKLYSCSYDGTLRCADLTVPVFHEVDLKFTLLFNTKK 244
Query: 686 -LTRIDFNTRLPVIVCGDTKGTC 707
L+ ++ +T + G T +C
Sbjct: 245 VLSLVEDDTAFSYMTFGTTSHSC 267
>SB_26376| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1018
Score = 29.9 bits (64), Expect = 8.0
Identities = 24/71 (33%), Positives = 39/71 (54%), Gaps = 11/71 (15%)
Query: 251 PRRSVDTQTIPPPRA----NYGSTALQCI-----IFDYYQEDYARKQREKEEDKPKRHPI 301
P S T T PPPR+ + S AL+ + + D + ED A + EE+ PK+ +
Sbjct: 298 PTPSPPTPT-PPPRSPTPLHPSSEALEALRQVGELMDKH-EDLAERVDGLEEEMPKKANL 355
Query: 302 DNLKQLRKKTA 312
++L++LRK+ A
Sbjct: 356 EDLEELRKRPA 366
>SB_33677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 29.9 bits (64), Expect = 8.0
Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 3/77 (3%)
Query: 208 EPEGDEKDESKDTGEEVLEI-KPRVKKLANQFNFCERAALTYNFPRRSVDTQTIPPPRAN 266
E D+++ES+DT ++V+EI K RV L Q + + L+ ++ + D TI P N
Sbjct: 18 EANDDDEEESEDT-DQVIEIPKRRVLILMTQSGYFQ-GMLSGSWKESTEDFITIQVPDDN 75
Query: 267 YGSTALQCIIFDYYQED 283
AL Y +D
Sbjct: 76 VTVEALDVAFGSLYNDD 92
>SB_20665| Best HMM Match : 7tm_3 (HMM E-Value=1.8e-10)
Length = 1514
Score = 29.9 bits (64), Expect = 8.0
Identities = 27/92 (29%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 290 EKEEDKPKRHPIDNLKQLR--KKTAKHVKSA--QQIHDEQLAQRIREAWTILERLVNQNI 345
E EE + P+ K LR K +H K A Q +H + QRI + + E NQ++
Sbjct: 90 ELEELQESYLPLHGNKPLRVRKDLERHNKDALIQALHHVEEVQRIIDEFN--ECKPNQSV 147
Query: 346 YDDIAQDYRYWDDPSDEFREGMGSLLPLWRFQ 377
+I+ D W + E +L LWR +
Sbjct: 148 VLNISFDNNRWKPEASLVVEVANALTSLWRIK 179
>SB_19464| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1653
Score = 29.9 bits (64), Expect = 8.0
Identities = 23/92 (25%), Positives = 44/92 (47%), Gaps = 7/92 (7%)
Query: 281 QEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIR--EAW-TIL 337
+E++ ++ RE+ E +R D+ +++R + +HV ++ Q + ++W
Sbjct: 845 KEEFDKRDRERREKDDRRPREDDRERVRGRREEHVPKPAEVSRTQANMDLSALDSWDAST 904
Query: 338 ERLVNQNIYDDIAQDYRYWDDPSDEF-REGMG 368
R V +N +D +D D S F REG G
Sbjct: 905 PRKVERNTSEDYLRDQ---DTRSIRFSREGKG 933
>SB_15615| Best HMM Match : SAMP (HMM E-Value=0.06)
Length = 932
Score = 29.9 bits (64), Expect = 8.0
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 188 PHEPEPVADDLEATAGDVGEEPEGDEKD 215
P PEPVA +++T D+ + E DE D
Sbjct: 189 PQTPEPVAQPVDSTYADIIDSEEEDEDD 216
>SB_15350| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1126
Score = 29.9 bits (64), Expect = 8.0
Identities = 15/50 (30%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 285 ARKQREKEEDKPKRHPIDNLKQL--RKKTAKHVKSAQQIHDEQLAQRIRE 332
A+K++E+EED +R + L R+K + + +Q+ E+ A+R +E
Sbjct: 829 AKKKKEREEDAKRRLRLQKKADLDARRKQEEETRKQRQLEQEEEAKRHQE 878
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.319 0.136 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,360,133
Number of Sequences: 59808
Number of extensions: 1218908
Number of successful extensions: 3933
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 3820
Number of HSP's gapped (non-prelim): 115
length of query: 763
length of database: 16,821,457
effective HSP length: 88
effective length of query: 675
effective length of database: 11,558,353
effective search space: 7801888275
effective search space used: 7801888275
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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