Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001942-TA|BGIBMGA001942-PA|IPR002052|N-6
Adenine-specific DNA methylase, IPR001680|WD-40 repeat,
IPR011046|WD40-like
(763 letters)
Database: mosquito
2123 sequences; 516,269 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 31 0.15
AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical prote... 29 0.35
AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein. 27 1.8
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 26 3.2
U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase... 26 4.3
AF457546-1|AAL68776.1| 182|Anopheles gambiae 30 kDa protein pro... 26 4.3
AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein pr... 26 4.3
AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein. 26 4.3
AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein. 26 4.3
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 25 7.4
X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein. 25 9.8
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 25 9.8
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 25 9.8
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 25 9.8
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 30.7 bits (66), Expect = 0.15
Identities = 21/79 (26%), Positives = 35/79 (44%), Gaps = 5/79 (6%)
Query: 37 IEDEALEWLKPRALIKPDDQEDVPEADLDEEVGRVLTTINPNWVA--DEVAYHYGLGRFV 94
+E +EW P + D Q+ V E +L EE+ + ++NP D + +
Sbjct: 389 LERPPMEW--PETEVGGDPQDPVSEEELAEELKEIARSLNPKKAPGDDNIPNMAAAAAIL 446
Query: 95 AKPKPTFGKAYPLYIYQGT 113
A P+ F K+Y + GT
Sbjct: 447 AFPE-VFAKSYKQLLEAGT 464
>AJ297931-1|CAC35451.1| 166|Anopheles gambiae hypothetical protein
protein.
Length = 166
Score = 29.5 bits (63), Expect = 0.35
Identities = 16/44 (36%), Positives = 23/44 (52%)
Query: 183 EAVEGPHEPEPVADDLEATAGDVGEEPEGDEKDESKDTGEEVLE 226
E +E E E AD+ EA + E E DE +E++ EE+ E
Sbjct: 78 EHLEEEQEEEAEADEEEADESESEESEESDELEEARLVAEELEE 121
>AF387857-1|AAL58707.1| 215|Anopheles gambiae integrase protein.
Length = 215
Score = 27.1 bits (57), Expect = 1.8
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 188 PHEPEPVADDLEATAGDVGEEPEGDEKDESKDT--GEEVLEIKPRVKKLANQ-----FNF 240
P + + DD DVG+ E +E+D + +T EE+ + + N+ +
Sbjct: 97 PFDDDSDFDDDSDFDDDVGDRLESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDDGHT 156
Query: 241 CERAALTYNFPRRSVDTQTIPPPR 264
ERAA R S T+ +PP R
Sbjct: 157 LERAAEELTVRRSSRSTKGVPPQR 180
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 26.2 bits (55), Expect = 3.2
Identities = 16/54 (29%), Positives = 31/54 (57%), Gaps = 2/54 (3%)
Query: 281 QEDYARKQREKEE-DKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLA-QRIRE 332
+E R+QREKE+ +K +R + +Q R+K + + ++ + + A +R RE
Sbjct: 475 REQREREQREKEQREKEQREKEERERQQREKEQREREQREKEREREAARERERE 528
Score = 24.6 bits (51), Expect = 9.8
Identities = 12/52 (23%), Positives = 31/52 (59%)
Query: 281 QEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIRE 332
+E ++QREKEE + ++ + ++ +++ + ++A++ E+ +R RE
Sbjct: 485 KEQREKEQREKEERERQQREKEQREREQREKEREREAARERERERERERERE 536
>U89800-1|AAD03793.1| 260|Anopheles gambiae Tc1-like transposase
protein.
Length = 260
Score = 25.8 bits (54), Expect = 4.3
Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 3/55 (5%)
Query: 296 PKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIREAWTILERLVNQNIYDDIA 350
P +PI+NL K +HVK+ + L R W ++R +N+ D+A
Sbjct: 193 PDLNPIENLWSTLK---RHVKNQPARSADDLWTRCEAMWKRIDRSECRNLIGDMA 244
>AF457546-1|AAL68776.1| 182|Anopheles gambiae 30 kDa protein
protein.
Length = 182
Score = 25.8 bits (54), Expect = 4.3
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 195 ADDLEATAGDVGEEPEGDEKDESKDTGEE 223
+DD + A D EE + D +++S++ GEE
Sbjct: 117 SDDAVSGADDETEESKDDAEEDSEEGGEE 145
>AF387862-2|AAL56548.1| 942|Anopheles gambiae pol polyprotein
protein.
Length = 942
Score = 25.8 bits (54), Expect = 4.3
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 196 DDLEATAGDVGEEPEGDEKDESKDT--GEEVLEIKPRVKKLANQ-----FNFCERAALTY 248
DD DVG+ E +E+D + +T EE+ + + N+ + ERAA
Sbjct: 329 DDDSDFDDDVGDRLESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDDGHTLERAAEEL 388
Query: 249 NFPRRSVDTQTIPPPR 264
R S T+ +PP R
Sbjct: 389 TVRRSSRSTKGVPPQR 404
>AF387858-1|AAL58708.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 25.8 bits (54), Expect = 4.3
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 196 DDLEATAGDVGEEPEGDEKDESKDT--GEEVLEIKPRVKKLANQ-----FNFCERAALTY 248
DD DVG+ E +E+D + +T EE+ + + N+ + ERAA
Sbjct: 99 DDDSDFDDDVGDRLESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDDGHTLERAAEEL 158
Query: 249 NFPRRSVDTQTIPPPR 264
R S T+ +PP R
Sbjct: 159 TVRRSSRSTKGVPPQR 174
>AF387850-1|AAL58705.1| 209|Anopheles gambiae integrase protein.
Length = 209
Score = 25.8 bits (54), Expect = 4.3
Identities = 22/76 (28%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 196 DDLEATAGDVGEEPEGDEKDESKDT--GEEVLEIKPRVKKLANQ-----FNFCERAALTY 248
DD DVG+ E +E+D + +T EE+ + + N+ + ERAA
Sbjct: 99 DDDSDFDDDVGDRLESEEEDSTDETLIEEELTDTDSSMCDSTNEDDGDDGHTLERAAEEL 158
Query: 249 NFPRRSVDTQTIPPPR 264
R S T+ +PP R
Sbjct: 159 TVRRSSRSTKGVPPQR 174
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 25.0 bits (52), Expect = 7.4
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 15/101 (14%)
Query: 286 RKQREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIREAWTILERLVNQNI 345
R Q E+E +K + + L++++ K + + I E +A + REA ++RL + I
Sbjct: 958 RTQLEEEANKLR----EELEEMKLAIEKAHEGSSSIKKEIVALQKREAEGKMKRLEFEQI 1013
Query: 346 YDDIAQDYRYWDDPSDEFREGMGSLLPLWRFQFEPMRSHAV 386
I + D LP W+ Q +P++ H +
Sbjct: 1014 LQTIETKLQETKDT-----------LPHWQLQLKPLKLHEI 1043
>X85217-1|CAA59483.1| 1231|Anopheles gambiae Anlar protein.
Length = 1231
Score = 24.6 bits (51), Expect = 9.8
Identities = 9/21 (42%), Positives = 14/21 (66%)
Query: 228 KPRVKKLANQFNFCERAALTY 248
+P + + +Q+ FC RAAL Y
Sbjct: 1202 RPAMVQTEDQYQFCYRAALEY 1222
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 182 SEAVEGPHEPEPVADDLEATAG 203
+EAV PHEP ++D +E G
Sbjct: 409 AEAVGCPHEPSKLSDAVECLRG 430
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 182 SEAVEGPHEPEPVADDLEATAG 203
+EAV PHEP ++D +E G
Sbjct: 409 AEAVGCPHEPSKLSDAVECLRG 430
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 24.6 bits (51), Expect = 9.8
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 182 SEAVEGPHEPEPVADDLEATAG 203
+EAV PHEP ++D +E G
Sbjct: 295 AEAVGCPHEPSKLSDAVECLRG 316
Database: mosquito
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 516,269
Number of sequences in database: 2123
Lambda K H
0.319 0.136 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 837,755
Number of Sequences: 2123
Number of extensions: 37018
Number of successful extensions: 70
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 57
Number of HSP's gapped (non-prelim): 19
length of query: 763
length of database: 516,269
effective HSP length: 69
effective length of query: 694
effective length of database: 369,782
effective search space: 256628708
effective search space used: 256628708
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 51 (24.6 bits)
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