Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001942-TA|BGIBMGA001942-PA|IPR002052|N-6
Adenine-specific DNA methylase, IPR001680|WD-40 repeat,
IPR011046|WD40-like
(763 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,... 80 5e-15
Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical p... 47 6e-05
AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical ... 47 6e-05
AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic mul... 47 6e-05
Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical pr... 39 0.011
Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical pr... 38 0.020
Z81097-12|CAB03172.1| 412|Caenorhabditis elegans Hypothetical p... 38 0.035
AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical ... 37 0.046
AL132876-7|CAD21659.1| 449|Caenorhabditis elegans Hypothetical ... 33 0.57
AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical ... 33 0.57
Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical pr... 33 0.75
Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical pr... 33 0.75
Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical pr... 33 0.75
Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical pr... 33 0.75
Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical pr... 33 0.75
U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical pr... 33 0.75
AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical ... 33 0.75
AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein. 33 0.75
AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical ... 33 0.75
AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp (s... 33 0.75
Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical pr... 33 1.00
Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical p... 33 1.00
Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical p... 33 1.00
U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical pr... 32 1.3
U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily ass... 32 1.3
U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily ass... 32 1.3
AF098991-1|AAC67449.2| 758|Caenorhabditis elegans Hypothetical ... 32 1.7
AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying de... 32 1.7
AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying de... 32 1.7
AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying de... 32 1.7
AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying de... 32 1.7
AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying de... 32 1.7
U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical pr... 31 2.3
AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical... 31 2.3
AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical... 31 2.3
Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical pr... 31 3.0
Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical pr... 31 3.0
AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein. 31 3.0
AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical ... 31 3.0
Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical pr... 31 4.0
U56966-9|AAA98722.1| 686|Caenorhabditis elegans Amyloid precurs... 31 4.0
U56966-8|AAK68242.1| 684|Caenorhabditis elegans Amyloid precurs... 31 4.0
U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid pr... 31 4.0
AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein... 31 4.0
AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein. 31 4.0
AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal chem... 31 4.0
Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical p... 30 5.3
Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical pr... 30 5.3
Z72502-5|CAA96589.1| 750|Caenorhabditis elegans Hypothetical pr... 30 5.3
Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical pr... 30 5.3
Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical pr... 30 7.0
Z73424-5|CAA97782.3| 506|Caenorhabditis elegans Hypothetical pr... 30 7.0
AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin con... 30 7.0
AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical ... 30 7.0
Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z81109-7|CAB03241.1| 425|Caenorhabditis elegans Hypothetical pr... 29 9.3
Z70783-8|CAA94859.1| 175|Caenorhabditis elegans Hypothetical pr... 29 9.3
AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical ... 29 9.3
AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related n... 29 9.3
>AF045642-2|AAC02580.1| 643|Caenorhabditis elegans Dynein chain,
light intermediateprotein 1 protein.
Length = 643
Score = 80.2 bits (189), Expect = 5e-15
Identities = 95/412 (23%), Positives = 170/412 (41%), Gaps = 36/412 (8%)
Query: 323 DEQLAQRIREAWTILERLVNQNIYDDIAQDYRYWDDPSDEFREGMGSLLPLWRFQFEPMR 382
D + + ++ R +N+ I DI +Y DP ++ L +Q E
Sbjct: 226 DPEFLDSFNRSCKVISRALNEEI--DICINYT--KDPYEKAIASDDLLHLAQVYQDETWT 281
Query: 383 S-HAVCDVQWNPHYQDLFAVAYGSLDFTSQQKTGCLCLYSIKNPAYP-EYAVVTDSPVIC 440
+ V + ++ HY DL AV+YG D ++ G + +++ K+ E+ V S +
Sbjct: 282 AKRLVTGMAFSEHYPDLLAVSYGPCDIPNEPP-GVIVVWNTKSKRMTAEFIVYCQSEIQS 340
Query: 441 LDVYKETPYLICVGLYDGNVCVYNAQLTLESSYQYKSDSVRDKHSNIVWEVRWGARLIDG 500
+ + +L+ G G +CV++ +LT +S H+ V +
Sbjct: 341 VAFARFHAHLLLAGCESGQICVWDNRLTSRKLPINRSPLTTQAHTYTVSCLAVVGT--KN 398
Query: 501 ESTFFSISGDGRVVQWAVMPGELQATTIITLTSNVPPIPGPDGTMINVNSCGSC--ICFH 558
F S+S DGR+ W + LT P+ G + M S + F
Sbjct: 399 AHNFVSLSRDGRICSW----------NVDNLTQ---PVDGKE-LMTKEGKAASATRMSFP 444
Query: 559 PEKPDIFMVGTEDGMIHTCSLKYNRNYVRSV----QGHHMPVYRINYNYFN-----NSIY 609
+ F+VGT+ G I S V +GH + I ++ + + ++
Sbjct: 445 IGEMQTFVVGTDTGEILAASRNGADPAVIKTDVCYKGHSGTLTGIEFHRASGVVDFSHLF 504
Query: 610 ASCSGDWRVKIWEDGREEPLFMFELGA-AVGDVKWAPYSSTVFAACTADGKVYVYDLNVN 668
S S DW VK+W F FE V DV W+P VFA+ ADG ++V++LN +
Sbjct: 505 ISSSHDWTVKLWSTKDANLKFSFESHPDLVLDVAWSPVHPAVFASIDADGNIFVWNLNED 564
Query: 669 KYRPIC-VQAVVSKKTKKLTRIDFNTRLPVIVCGDTKGTCHVLKLSPNLRVM 719
P+ ++A ++ + R+ ++ + GD +G H+ + +L V+
Sbjct: 565 VEGPVARLRAGAEGESVYMNRLIWSPDGKHVFVGDDEGRVHMYDVRESLYVL 616
>Z81097-20|CAB03178.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 46.8 bits (106), Expect = 6e-05
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 38/233 (16%)
Query: 457 DGNVCVYNAQLTLESSYQYKSDSVRDKHSNIVWEVRWGARLIDGESTFFSISGDGRVVQW 516
D VC ++ + + ++ V H ++V +V W L DG F S+ D +++ W
Sbjct: 194 DQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHV-LHDG--VFGSVGDDKKLLIW 250
Query: 517 AVMPGELQATTIITLTSNVPPIPGPDGTMINVNSCG-SCICFHPEKPDIFMVGTEDGMIH 575
V ++ P G I+ +S +C+ F+P I G+ D +
Sbjct: 251 DVR-------------TSTP------GHCIDAHSAEVNCLAFNPYSEFILATGSADKTVA 291
Query: 576 TCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW-------------- 621
L+ R + S + H ++++ ++ N +I AS D R+ +W
Sbjct: 292 LWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDA 351
Query: 622 EDGREEPLFMF-ELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPI 673
EDG E LF+ A + D W P V + + D + V+ + N Y +
Sbjct: 352 EDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEV 404
Score = 39.5 bits (88), Expect = 0.009
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 552 GSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQ------GHHMPVYRINYNYFN 605
G + ++P K + + ++D + + N+N +Q GH V + ++ +
Sbjct: 175 GYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLH 234
Query: 606 NSIYASCSGDWRVKIWEDGREEPLFMFEL-GAAVGDVKWAPYSSTVFAACTADGKVYVYD 664
+ ++ S D ++ IW+ P + A V + + PYS + A +AD V ++D
Sbjct: 235 DGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWD 294
Query: 665 L 665
L
Sbjct: 295 L 295
>AL023833-1|CAA19477.1| 417|Caenorhabditis elegans Hypothetical
protein K07A1.12 protein.
Length = 417
Score = 46.8 bits (106), Expect = 6e-05
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 38/233 (16%)
Query: 457 DGNVCVYNAQLTLESSYQYKSDSVRDKHSNIVWEVRWGARLIDGESTFFSISGDGRVVQW 516
D VC ++ + + ++ V H ++V +V W L DG F S+ D +++ W
Sbjct: 194 DQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHV-LHDG--VFGSVGDDKKLLIW 250
Query: 517 AVMPGELQATTIITLTSNVPPIPGPDGTMINVNSCG-SCICFHPEKPDIFMVGTEDGMIH 575
V ++ P G I+ +S +C+ F+P I G+ D +
Sbjct: 251 DVR-------------TSTP------GHCIDAHSAEVNCLAFNPYSEFILATGSADKTVA 291
Query: 576 TCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW-------------- 621
L+ R + S + H ++++ ++ N +I AS D R+ +W
Sbjct: 292 LWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDA 351
Query: 622 EDGREEPLFMF-ELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPI 673
EDG E LF+ A + D W P V + + D + V+ + N Y +
Sbjct: 352 EDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEV 404
Score = 39.5 bits (88), Expect = 0.009
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 552 GSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQ------GHHMPVYRINYNYFN 605
G + ++P K + + ++D + + N+N +Q GH V + ++ +
Sbjct: 175 GYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLH 234
Query: 606 NSIYASCSGDWRVKIWEDGREEPLFMFEL-GAAVGDVKWAPYSSTVFAACTADGKVYVYD 664
+ ++ S D ++ IW+ P + A V + + PYS + A +AD V ++D
Sbjct: 235 DGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWD 294
Query: 665 L 665
L
Sbjct: 295 L 295
>AF116530-1|AAD05571.1| 417|Caenorhabditis elegans synthetic
multivulva protein LIN-53 p48 protein.
Length = 417
Score = 46.8 bits (106), Expect = 6e-05
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 38/233 (16%)
Query: 457 DGNVCVYNAQLTLESSYQYKSDSVRDKHSNIVWEVRWGARLIDGESTFFSISGDGRVVQW 516
D VC ++ + + ++ V H ++V +V W L DG F S+ D +++ W
Sbjct: 194 DQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHV-LHDG--VFGSVGDDKKLLIW 250
Query: 517 AVMPGELQATTIITLTSNVPPIPGPDGTMINVNSCG-SCICFHPEKPDIFMVGTEDGMIH 575
V ++ P G I+ +S +C+ F+P I G+ D +
Sbjct: 251 DVR-------------TSTP------GHCIDAHSAEVNCLAFNPYSEFILATGSADKTVA 291
Query: 576 TCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW-------------- 621
L+ R + S + H ++++ ++ N +I AS D R+ +W
Sbjct: 292 LWDLRNLRMKLHSFESHRDEIFQVQWSPHNETILASSGTDKRLHVWDLSKIGEDQSAEDA 351
Query: 622 EDGREEPLFMF-ELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPI 673
EDG E LF+ A + D W P V + + D + V+ + N Y +
Sbjct: 352 EDGPPELLFIHGGHTAKISDFSWNPNEPWVVCSVSEDNILQVWQMADNIYNEV 404
Score = 39.5 bits (88), Expect = 0.009
Identities = 26/121 (21%), Positives = 54/121 (44%), Gaps = 7/121 (5%)
Query: 552 GSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQ------GHHMPVYRINYNYFN 605
G + ++P K + + ++D + + N+N +Q GH V + ++ +
Sbjct: 175 GYGLSWNPNKEGLILSASDDQTVCHWDINANQNVAGELQAKDVFKGHESVVEDVAWHVLH 234
Query: 606 NSIYASCSGDWRVKIWEDGREEPLFMFEL-GAAVGDVKWAPYSSTVFAACTADGKVYVYD 664
+ ++ S D ++ IW+ P + A V + + PYS + A +AD V ++D
Sbjct: 235 DGVFGSVGDDKKLLIWDVRTSTPGHCIDAHSAEVNCLAFNPYSEFILATGSADKTVALWD 294
Query: 665 L 665
L
Sbjct: 295 L 295
>Z82274-8|CAB05230.3| 467|Caenorhabditis elegans Hypothetical
protein JC8.2 protein.
Length = 467
Score = 39.1 bits (87), Expect = 0.011
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 588 SVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMF-ELGAAVGDVKWAPY 646
S QGH V + +N + AS D V +W+ +P + + G + +KW P
Sbjct: 241 SAQGHTDAVISLAWNRITTHVLASGGADKTVVLWDLDEAKPAQIIPDQGGEIQTMKWHPN 300
Query: 647 SSTVFAACTADGKVYVYD 664
ST T G+V V D
Sbjct: 301 ESTFLLLGTMKGQVNVVD 318
>Z68342-4|CAA92776.1| 1000|Caenorhabditis elegans Hypothetical
protein F38E11.5 protein.
Length = 1000
Score = 38.3 bits (85), Expect = 0.020
Identities = 38/151 (25%), Positives = 64/151 (42%), Gaps = 8/151 (5%)
Query: 558 HPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWR 617
HP P + ++D ++ +S +GH V +I N +N+ +A+ S D
Sbjct: 108 HPTLPYVIS-SSDDMLVKMWDWDNKWAMKQSFEGHTHYVMQIAINPKDNNTFATASLDKT 166
Query: 618 VKIWEDGREEPLFMFE-LGAAVGDVKWAPYSSTVFAACTADGK-VYVYDLNVNKYRPICV 675
VK+W+ G P F E V V + + AD V ++D NK CV
Sbjct: 167 VKVWQFGSNVPNFTLEGHEKGVNCVDYYHGGEKPYIISGADDHLVKIWDYQ-NK---TCV 222
Query: 676 QAVVSKKTKKLTRIDFNTRLPVIVCGDTKGT 706
Q + + ++ + F+ LP+I+ G T
Sbjct: 223 Q-TLDGHAQNVSSVCFHPELPLIITGSEDST 252
Score = 29.5 bits (63), Expect = 9.3
Identities = 40/162 (24%), Positives = 62/162 (38%), Gaps = 13/162 (8%)
Query: 542 DGTMINVNSCGSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINY 601
DG NV+S +CFHPE P + + G+ED + R G V+ I
Sbjct: 226 DGHAQNVSS----VCFHPELP-LIITGSEDSTVRLWHANTYRLETTLNYGLER-VWCIQA 279
Query: 602 NYFNNSIYASC-SGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKV 660
N+I G +K+ GREEP + + G + WA +S A
Sbjct: 280 QKGANTIAIGYDEGSVTLKL---GREEPAVSMD---SSGKILWAKHSEIQQANLKTISTE 333
Query: 661 YVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLPVIVCGD 702
+ + P+ V+ + S + T + V+ CGD
Sbjct: 334 ESEAIQDGERLPLSVKDLGSSEIYPQTLAHSSNGRFVVACGD 375
>Z81097-12|CAB03172.1| 412|Caenorhabditis elegans Hypothetical
protein K07A1.11 protein.
Length = 412
Score = 37.5 bits (83), Expect = 0.035
Identities = 29/135 (21%), Positives = 60/135 (44%), Gaps = 7/135 (5%)
Query: 541 PDGTMINVNSCGSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRIN 600
P T + + +CI F+P I G+ D + ++ R + +++ H+ +++++
Sbjct: 256 PQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRKKMYTLKHHNDEIFQVS 315
Query: 601 YNYFNNSIYASCSGDWRVKIWEDGR-EEPLFMFELGAAVGDVKWAPYSSTVFAACTADGK 659
++ ++ AS D RV +W+ + ++P AA D + +F GK
Sbjct: 316 FSPHYETVLASSGSDDRVIVWDISKIQDP---SSSSAASSD---SVPPEVIFIHAGHTGK 369
Query: 660 VYVYDLNVNKYRPIC 674
V + N N+ IC
Sbjct: 370 VADFSWNPNRPWTIC 384
Score = 33.1 bits (72), Expect = 0.75
Identities = 27/110 (24%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Query: 570 EDGMIHTCSLKYNRNYVRSVQ--------GHHMPVYRINYNYFNNSIYASCSGDWRVKIW 621
+DGMI C N N S Q GH ++++ +N ++ S D ++ +W
Sbjct: 192 DDGMI--CHWDINANQTISGQIVPQSKFKGHSSNAEDVSFHALHNFVFGSVGDDRKLNLW 249
Query: 622 EDGREEP-LFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDL-NVNK 669
+ + +P L A V + + P+S + A + D V ++D+ N+ K
Sbjct: 250 DLRQSKPQLTAVGHTAEVNCITFNPFSEYILATGSVDKTVALWDMRNMRK 299
>AC024818-3|AAF60780.2| 453|Caenorhabditis elegans Hypothetical
protein Y54H5A.1 protein.
Length = 453
Score = 37.1 bits (82), Expect = 0.046
Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 1/76 (1%)
Query: 637 AVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDFNTRLP 696
+V D+ W+P + + A+C+ADG + ++D + + CV V + I +N
Sbjct: 277 SVEDLAWSPTETGLLASCSADGSIKLWDTR-SAPKDACVCTVQKAHESDVNVISWNRHEN 335
Query: 697 VIVCGDTKGTCHVLKL 712
+IV G G + L
Sbjct: 336 LIVSGGDDGELKIWSL 351
Score = 33.1 bits (72), Expect = 0.75
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 7/81 (8%)
Query: 590 QGHHMPVYRINYNYFNNSIYASCSGDWRVKIW-----EDGREEPLFMFELGAAVGDVKWA 644
+ H V I++N N I S D +KIW + G+ LF + + + V W
Sbjct: 319 KAHESDVNVISWNRHENLI-VSGGDDGELKIWSLKTIQFGQPVALFKYH-NSPITSVDWH 376
Query: 645 PYSSTVFAACTADGKVYVYDL 665
P+ +T F A D + ++D+
Sbjct: 377 PHETTTFMASGEDDQTTIWDI 397
>AL132876-7|CAD21659.1| 449|Caenorhabditis elegans Hypothetical
protein Y105E8A.8 protein.
Length = 449
Score = 33.5 bits (73), Expect = 0.57
Identities = 32/127 (25%), Positives = 54/127 (42%), Gaps = 4/127 (3%)
Query: 558 HPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYAS-CSGDW 616
HP PD+F G ++ SLK+ RN V +++G ++++ +YAS GD
Sbjct: 272 HPTMPDLFAAGGSSSLVAIYSLKW-RNAVSTIEGSLKGYTNLHFSPDGLKLYASERKGDI 330
Query: 617 RVKIWEDGREEPLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLN--VNKYRPIC 674
+ ++ A S + + T+ G V VYDL+ + +P
Sbjct: 331 HCFDTRMNMLTQILKRDMTATHRTRFSIDKSGRLLFSGTSGGDVIVYDLHEYSEELQPAH 390
Query: 675 VQAVVSK 681
VQ V S+
Sbjct: 391 VQNVASR 397
>AF106576-4|AAC78176.1| 473|Caenorhabditis elegans Hypothetical
protein W07E6.2 protein.
Length = 473
Score = 33.5 bits (73), Expect = 0.57
Identities = 21/78 (26%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 588 SVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAA-VGDVKWAPY 646
S+ GH PV ++ + AS SGD ++IW+ E PL + + V + W+P
Sbjct: 100 SIPGHGEPVISAQFSPDGRGL-ASGSGDQTMRIWDIELELPLHTCKSHKSWVLCIAWSPD 158
Query: 647 SSTVFAACTADGKVYVYD 664
++ + +AC +G++ +++
Sbjct: 159 ATKIASAC-KNGEICIWN 175
>Z92813-8|CAB07290.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 33.1 bits (72), Expect = 0.75
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 576 TCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGRE-EPLFMFEL 634
T + RN + + H V + F + + A+CS D VKIW+ R+ P E+
Sbjct: 63 TAKGRRTRNDIGIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHSPKLATEI 122
Query: 635 ----GAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNK 669
G + + A ++ A + G Y+ D++ K
Sbjct: 123 DVGGGNVIAECLRAHSTADNILAVGSHGSTYITDISTGK 161
>Z31590-4|CAD27606.1| 495|Caenorhabditis elegans Hypothetical
protein R01H10.3d protein.
Length = 495
Score = 33.1 bits (72), Expect = 0.75
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 589 VQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW 621
V H P + ++ FN+++ ASCS D K+W
Sbjct: 75 VDAHKAPCLEVAWSPFNDNVIASCSEDTTCKVW 107
>Z31590-3|CAD27605.1| 607|Caenorhabditis elegans Hypothetical
protein R01H10.3c protein.
Length = 607
Score = 33.1 bits (72), Expect = 0.75
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 589 VQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW 621
V H P + ++ FN+++ ASCS D K+W
Sbjct: 75 VDAHKAPCLEVAWSPFNDNVIASCSEDTTCKVW 107
>Z31590-2|CAD27604.1| 538|Caenorhabditis elegans Hypothetical
protein R01H10.3b protein.
Length = 538
Score = 33.1 bits (72), Expect = 0.75
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 589 VQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW 621
V H P + ++ FN+++ ASCS D K+W
Sbjct: 75 VDAHKAPCLEVAWSPFNDNVIASCSEDTTCKVW 107
>Z31590-1|CAA83461.1| 605|Caenorhabditis elegans Hypothetical
protein R01H10.3a protein.
Length = 605
Score = 33.1 bits (72), Expect = 0.75
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 589 VQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW 621
V H P + ++ FN+++ ASCS D K+W
Sbjct: 75 VDAHKAPCLEVAWSPFNDNVIASCSEDTTCKVW 107
>U42833-5|AAA83580.1| 444|Caenorhabditis elegans Hypothetical
protein ZK430.7 protein.
Length = 444
Score = 33.1 bits (72), Expect = 0.75
Identities = 18/70 (25%), Positives = 33/70 (47%), Gaps = 4/70 (5%)
Query: 596 VYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGA-AVGDVKWAPYSSTVFAAC 654
VY +++ F++ + +C D + +W+ RE PL + LG + + P V
Sbjct: 156 VYGVSHLSFSSD-FVTCGED--ISVWKPYRETPLRSYNLGTDTIHTCRANPVEENVIVGA 212
Query: 655 TADGKVYVYD 664
+D +YV D
Sbjct: 213 RSDRSIYVLD 222
Score = 32.7 bits (71), Expect = 1.00
Identities = 25/106 (23%), Positives = 45/106 (42%), Gaps = 4/106 (3%)
Query: 558 HPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWR 617
HP +P G DG + +L +R ++ H V I+ + N + + D +
Sbjct: 75 HPNRPSTVFSGARDGQVKIWNLA-SRECQATLDAHRGLVNDISIDNNNGENFVTVGQDNQ 133
Query: 618 VKIWE-DGREE-PLFMFELGAAVGDVKWAPYSSTVFAACTADGKVY 661
+K W+ +G+++ P + V V +SS F C D V+
Sbjct: 134 LKYWKIEGQQKTPAHSIAMDGIVYGVSHLSFSSD-FVTCGEDISVW 178
Score = 29.5 bits (63), Expect = 9.3
Identities = 22/100 (22%), Positives = 48/100 (48%), Gaps = 3/100 (3%)
Query: 555 ICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSG 614
I ++P + F V +ED ++T ++Y + V+S QG V ++Y+ + +
Sbjct: 241 ISWNPMEAYNFTVASEDYSLYTFDMRYMEHPVQSHQGFTSAVLDVDYSPTGQE-FVAAGY 299
Query: 615 DWRVKIWE--DGREEPLFMFELGAAVGDVKWAPYSSTVFA 652
D +++++ D ++ + A+V V W+ S V +
Sbjct: 300 DRSIRLFKARDMTSRDVYYTKRMASVLSVLWSADSKFVLS 339
>AL032658-5|CAA21748.1| 1057|Caenorhabditis elegans Hypothetical
protein Y76A2B.1 protein.
Length = 1057
Score = 33.1 bits (72), Expect = 0.75
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 576 TCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGRE-EPLFMFEL 634
T + RN + + H V + F + + A+CS D VKIW+ R+ P E+
Sbjct: 63 TAKGRRTRNDIGIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHSPKLATEI 122
Query: 635 ----GAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNK 669
G + + A ++ A + G Y+ D++ K
Sbjct: 123 DVGGGNVIAECLRAHSTADNILAVGSHGSTYITDISTGK 161
>AF129126-1|AAD25089.2| 1057|Caenorhabditis elegans POD-1 protein.
Length = 1057
Score = 33.1 bits (72), Expect = 0.75
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 5/99 (5%)
Query: 576 TCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGRE-EPLFMFEL 634
T + RN + + H V + F + + A+CS D VKIW+ R+ P E+
Sbjct: 63 TAKGRRTRNDIGIIAAHGEQVADFGFLTFADELLATCSRDEPVKIWKLSRDHSPKLATEI 122
Query: 635 ----GAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNK 669
G + + A ++ A + G Y+ D++ K
Sbjct: 123 DVGGGNVIAECLRAHSTADNILAVGSHGSTYITDISTGK 161
>AF039713-6|AAB96723.1| 829|Caenorhabditis elegans Hypothetical
protein F57B10.6 protein.
Length = 829
Score = 33.1 bits (72), Expect = 0.75
Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 286 RKQREKEEDKPKRHP-IDNLKQLRKKTAKHVKSAQQIHDEQLAQRIREAWTILERLVNQN 344
R++R+ ++D K + LK L+K ++ + D LA I+E + ++++ +
Sbjct: 89 RQKRQNDDDILKNSKKMGKLKVLKKSQKIREIASGGLDDVALANAIKEVISPSKKVILND 148
Query: 345 IYDDIAQDYRYWDDPS 360
IY DI Y D PS
Sbjct: 149 IYKDIPSTSTYLDKPS 164
>AF039711-10|AAB96707.2| 567|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 17 protein.
Length = 567
Score = 33.1 bits (72), Expect = 0.75
Identities = 37/157 (23%), Positives = 67/157 (42%), Gaps = 8/157 (5%)
Query: 554 CICFHPE--KPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYAS 611
C+ +HP+ K +F+VG ++ I + + V+ H V I + + N +AS
Sbjct: 365 CLKYHPDDDKNHMFLVGMQNKKIIQWDSR-SGEIVQEYDRHLQAVNSITF-FDKNRRFAS 422
Query: 612 CSGDWRVKIWE-DGREEPLFMFELGA-AVGDVKWAPYSSTVFAACTADGKVYVYDLNVNK 669
S D V+IWE + + + +G A+ + +P V C D ++ ++ L +K
Sbjct: 423 TSDDKSVRIWEWEIPVDTKLIQNVGLHAIPTMTKSPNDKWVVGQC-MDNRIVLFQLVDDK 481
Query: 670 YRPICVQAVVSKKTKKLT-RIDFNTRLPVIVCGDTKG 705
R +A IDF+ ++ GD G
Sbjct: 482 LRFSKKKAFRGHNAAGYACNIDFSPDQSFLISGDADG 518
Score = 32.3 bits (70), Expect = 1.3
Identities = 21/87 (24%), Positives = 38/87 (43%), Gaps = 1/87 (1%)
Query: 559 PEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRV 618
P+ +F+ + D I + + VR+ GH +PV + +N + + S S D V
Sbjct: 285 PKSAHLFLSCSMDTKIKLWEVYDRQRVVRTYAGHKLPVREVAFNN-EGTEFLSASFDRYV 343
Query: 619 KIWEDGREEPLFMFELGAAVGDVKWAP 645
K+W+ + F G +K+ P
Sbjct: 344 KLWDTETGQVKQRFHTGHVPYCLKYHP 370
>Z81048-4|CAB02844.1| 219|Caenorhabditis elegans Hypothetical
protein C41G7.6 protein.
Length = 219
Score = 32.7 bits (71), Expect = 1.00
Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 2/46 (4%)
Query: 188 PHEPEPVADDLEATAGDVGEEPEGDEKDESKDTGEEVLEIKPRVKK 233
P P PVA D A D GE+ +GD+K E K+ E+ E K KK
Sbjct: 52 PDAP-PVAPDAAAAPAD-GEKKDGDKKSEKKEGDEKKEEKKDEDKK 95
>Z71181-10|CAA94901.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 32.7 bits (71), Expect = 1.00
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 583 RNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPL 629
R ++ GH ++ + Y + +NS S S D V++WE G EPL
Sbjct: 456 RVLTETLTGHTDAIWSVAY-HSSNSRLVSASSDSTVRLWEPGNGEPL 501
>Z71177-11|CAA94873.2| 678|Caenorhabditis elegans Hypothetical
protein K07C5.8 protein.
Length = 678
Score = 32.7 bits (71), Expect = 1.00
Identities = 16/47 (34%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 583 RNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPL 629
R ++ GH ++ + Y + +NS S S D V++WE G EPL
Sbjct: 456 RVLTETLTGHTDAIWSVAY-HSSNSRLVSASSDSTVRLWEPGNGEPL 501
>U41992-4|AAL02506.2| 876|Caenorhabditis elegans Hypothetical
protein F32E10.3 protein.
Length = 876
Score = 32.3 bits (70), Expect = 1.3
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 12/150 (8%)
Query: 190 EPEPVAD-DLEATAGDVGEEPEGDEKDESKDTGEEVLEIKPRVKKLANQFN-FCERAALT 247
EP D D E + GEE DEKDES + E E + ++K+ F +RA
Sbjct: 402 EPPKEEDCDEEGSGSGSGEE---DEKDESSEKIELAPEKEDKIKEFLGVLRLFLDRA--E 456
Query: 248 YNFPRRSVDTQ---TIPPPRANYGSTALQCIIFDYYQEDYARKQREKEEDKPKRHPI--D 302
+ R+ +D Q T+ N A + + + ++K E++E+ K+ + +
Sbjct: 457 HGDLRKLLDDQSGKTLLERMKNAVREANRREFEMLEKLENSKKSEEEKEELAKKDQMSTE 516
Query: 303 NLKQLRKKTAKHVKSAQQIHDEQLAQRIRE 332
K L KK + V A +IH + A ++++
Sbjct: 517 EQKDLYKKISSAVMKAAKIHKIEEADKVQD 546
>U00045-2|AAL02501.1| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform a protein.
Length = 1004
Score = 32.3 bits (70), Expect = 1.3
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 214 KDESKDTGEEVLEIKPRVKKLANQFNFCERAALTYNFPRRSVDTQTIPPPRANYGSTALQ 273
K+E D GEEV E P + ++ + + ++N+ +S D PPPR Y + +LQ
Sbjct: 610 KNEYSD-GEEVTEKLPVTSRDSSPLRSALKKS-SHNYYHQSSDP-VAPPPRRYYSTESLQ 666
Query: 274 CIIFDYYQEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKHV 315
YQ + +EED+ ++++ R++ +HV
Sbjct: 667 LPKTSSYQ------RYSEEEDEEIEETYSSMRRHRQEIPRHV 702
>U00045-1|AAM29684.1| 1099|Caenorhabditis elegans Temporarily
assigned gene nameprotein 204, isoform c protein.
Length = 1099
Score = 32.3 bits (70), Expect = 1.3
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 214 KDESKDTGEEVLEIKPRVKKLANQFNFCERAALTYNFPRRSVDTQTIPPPRANYGSTALQ 273
K+E D GEEV E P + ++ + + ++N+ +S D PPPR Y + +LQ
Sbjct: 705 KNEYSD-GEEVTEKLPVTSRDSSPLRSALKKS-SHNYYHQSSDP-VAPPPRRYYSTESLQ 761
Query: 274 CIIFDYYQEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKHV 315
YQ + +EED+ ++++ R++ +HV
Sbjct: 762 LPKTSSYQ------RYSEEEDEEIEETYSSMRRHRQEIPRHV 797
>AF098991-1|AAC67449.2| 758|Caenorhabditis elegans Hypothetical
protein F59H5.1 protein.
Length = 758
Score = 31.9 bits (69), Expect = 1.7
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 578 SLKYNRNYVRSVQGHHMP-VYRINYNYFNNSIY 609
S+KY Y R +QG+ +P YR +Y++++ Y
Sbjct: 112 SMKYWERYKREIQGYRLPKQYRYHYSFYSKCFY 144
>AF067612-6|AAU05568.1| 470|Caenorhabditis elegans Egg laying
defective protein 4,isoform f protein.
Length = 470
Score = 31.9 bits (69), Expect = 1.7
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 603 YFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWA---------PYSSTVFAA 653
+ +I S DW VK+++ R++ L +G W Y++ + A
Sbjct: 206 FAERNIMMETSTDWIVKLYKTFRDQKFVYMLLEVCLGGELWTTLRDRGHFDDYTARFYVA 265
Query: 654 CTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDF 691
C +G Y++ N+ YR + + + T L +DF
Sbjct: 266 CVLEGLEYLHRKNI-VYRDLKPENCLLANTGYLKLVDF 302
>AF067612-4|AAM98010.1| 749|Caenorhabditis elegans Egg laying
defective protein 4,isoform c protein.
Length = 749
Score = 31.9 bits (69), Expect = 1.7
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 603 YFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWA---------PYSSTVFAA 653
+ +I S DW VK+++ R++ L +G W Y++ + A
Sbjct: 485 FAERNIMMETSTDWIVKLYKTFRDQKFVYMLLEVCLGGELWTTLRDRGHFDDYTARFYVA 544
Query: 654 CTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDF 691
C +G Y++ N+ YR + + + T L +DF
Sbjct: 545 CVLEGLEYLHRKNI-VYRDLKPENCLLANTGYLKLVDF 581
>AF067612-3|AAU05567.1| 743|Caenorhabditis elegans Egg laying
defective protein 4,isoform e protein.
Length = 743
Score = 31.9 bits (69), Expect = 1.7
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 603 YFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWA---------PYSSTVFAA 653
+ +I S DW VK+++ R++ L +G W Y++ + A
Sbjct: 479 FAERNIMMETSTDWIVKLYKTFRDQKFVYMLLEVCLGGELWTTLRDRGHFDDYTARFYVA 538
Query: 654 CTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDF 691
C +G Y++ N+ YR + + + T L +DF
Sbjct: 539 CVLEGLEYLHRKNI-VYRDLKPENCLLANTGYLKLVDF 575
>AF067612-2|AAD36953.1| 737|Caenorhabditis elegans Egg laying
defective protein 4,isoform b protein.
Length = 737
Score = 31.9 bits (69), Expect = 1.7
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 603 YFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWA---------PYSSTVFAA 653
+ +I S DW VK+++ R++ L +G W Y++ + A
Sbjct: 473 FAERNIMMETSTDWIVKLYKTFRDQKFVYMLLEVCLGGELWTTLRDRGHFDDYTARFYVA 532
Query: 654 CTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDF 691
C +G Y++ N+ YR + + + T L +DF
Sbjct: 533 CVLEGLEYLHRKNI-VYRDLKPENCLLANTGYLKLVDF 569
>AF067612-1|AAD36954.1| 780|Caenorhabditis elegans Egg laying
defective protein 4,isoform a protein.
Length = 780
Score = 31.9 bits (69), Expect = 1.7
Identities = 22/98 (22%), Positives = 41/98 (41%), Gaps = 10/98 (10%)
Query: 603 YFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWA---------PYSSTVFAA 653
+ +I S DW VK+++ R++ L +G W Y++ + A
Sbjct: 516 FAERNIMMETSTDWIVKLYKTFRDQKFVYMLLEVCLGGELWTTLRDRGHFDDYTARFYVA 575
Query: 654 CTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLTRIDF 691
C +G Y++ N+ YR + + + T L +DF
Sbjct: 576 CVLEGLEYLHRKNI-VYRDLKPENCLLANTGYLKLVDF 612
>U41007-2|AAA82265.1| 248|Caenorhabditis elegans Hypothetical
protein C33H5.6 protein.
Length = 248
Score = 31.5 bits (68), Expect = 2.3
Identities = 31/139 (22%), Positives = 55/139 (39%), Gaps = 3/139 (2%)
Query: 568 GTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREE 627
G D I L+ ++YVR GH MPV I N + + S S D ++++ D R
Sbjct: 87 GPNDTTIRLLHLQ-KKSYVRYFDGHRMPVNFIRTNPKDREKFLSSSVDGEIRMF-DTRTF 144
Query: 628 PLFMFELGAAVGDVKWAPYSSTVFAACTADGKVYVYDLNVNKYRPICVQAVVSKKTKKLT 687
+ L + + P +FA T + ++D+ P + + +
Sbjct: 145 ENYGCLLAGHTPLIAFDP-DGILFAVATKSDTIKLFDMRSFDLGPFQSFIITKTDNDEWS 203
Query: 688 RIDFNTRLPVIVCGDTKGT 706
I+F+ I+ T G+
Sbjct: 204 DIEFSPCGKFILISTTAGS 222
>AC006684-12|AAN60497.1| 528|Caenorhabditis elegans Hypothetical
protein T02H6.1b protein.
Length = 528
Score = 31.5 bits (68), Expect = 2.3
Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 585 YVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE 622
+++ + GH P++ + + N++Y S S D VK+W+
Sbjct: 240 HIKDLSGHRGPIFSLTFQLKTNNLY-SASQDRSVKMWD 276
>AC006684-11|AAF39968.1| 550|Caenorhabditis elegans Hypothetical
protein T02H6.1a protein.
Length = 550
Score = 31.5 bits (68), Expect = 2.3
Identities = 11/38 (28%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 585 YVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE 622
+++ + GH P++ + + N++Y S S D VK+W+
Sbjct: 240 HIKDLSGHRGPIFSLTFQLKTNNLY-SASQDRSVKMWD 276
>Z82076-6|CAH10809.1| 450|Caenorhabditis elegans Hypothetical
protein W07G1.5b protein.
Length = 450
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 190 EPEPVADDLEATAGDVGEEPEGDEKDESKDTGEE 223
+ E V DD E D EE DE++E ++T EE
Sbjct: 371 DDEEVEDDEEDAGSDEAEEEPSDEEEEDEETEEE 404
>Z82076-4|CAB04937.2| 438|Caenorhabditis elegans Hypothetical
protein W07G1.5a protein.
Length = 438
Score = 31.1 bits (67), Expect = 3.0
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 190 EPEPVADDLEATAGDVGEEPEGDEKDESKDTGEE 223
+ E V DD E D EE DE++E ++T EE
Sbjct: 359 DDEEVEDDEEDAGSDEAEEEPSDEEEEDEETEEE 392
>Z81490-1|CAB04014.1| 510|Caenorhabditis elegans Hypothetical
protein CC4.3 protein.
Length = 510
Score = 31.1 bits (67), Expect = 3.0
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 552 GSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYAS 611
G C + + G D ++ +K + ++ ++GH + + Y+ N I S
Sbjct: 309 GVCAVRFSKDNSHILSGGNDHVVRVHGMKSGK-CLKEMRGHSSYITDVRYSDEGNHII-S 366
Query: 612 CSGDWRVKIWEDGREEPLFMFELGA 636
CS D +++W E L F +G+
Sbjct: 367 CSTDGSIRVWHGKSGECLSTFRVGS 391
>AF330595-1|AAK00353.1| 510|Caenorhabditis elegans SMU-1 protein.
Length = 510
Score = 31.1 bits (67), Expect = 3.0
Identities = 19/85 (22%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 552 GSCICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYAS 611
G C + + G D ++ +K + ++ ++GH + + Y+ N I S
Sbjct: 309 GVCAVRFSKDNSHILSGGNDHVVRVHGMKSGK-CLKEMRGHSSYITDVRYSDEGNHII-S 366
Query: 612 CSGDWRVKIWEDGREEPLFMFELGA 636
CS D +++W E L F +G+
Sbjct: 367 CSTDGSIRVWHGKSGECLSTFRVGS 391
>AF000299-1|AAC47980.1| 210|Caenorhabditis elegans Hypothetical
protein E03H12.5 protein.
Length = 210
Score = 31.1 bits (67), Expect = 3.0
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 191 PEPVADDLEATAGDVGEEPEGDEKDESKDTGEEVLEIKPRVKK 233
P A D A A GE+ +GD+K E KD ++ E K KK
Sbjct: 55 PAAPAPDAAAAAPAEGEKKDGDKKSEKKDGDKKEEEKKDEEKK 97
>Z81113-5|CAB03282.3| 404|Caenorhabditis elegans Hypothetical
protein T03F6.5 protein.
Length = 404
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 587 RSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW--EDGREEPLFMFELGAAVGDVKWA 644
+ + GH +P+ R+ ++ +I ASCS D +K+W E G+ E AV D+
Sbjct: 100 QKLTGHRLPITRVIFHPLW-TIMASCSEDATIKVWDYETGQLERTLKGHTD-AVNDIA-I 156
Query: 645 PYSSTVFAACTADGKVYVYD 664
+ +C++D + ++D
Sbjct: 157 DAAGKQLVSCSSDLSIKLWD 176
>U56966-9|AAA98722.1| 686|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform a protein.
Length = 686
Score = 30.7 bits (66), Expect = 4.0
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 278 DYYQEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKH--VKSAQQIHDE---QLAQRIRE 332
D Y++DY+ + EK+E++P D ++ T +H K A+ DE + ++ +
Sbjct: 220 DAYEDDYSEESDEKDEEEPSSQ--DPYFKIANWTNEHDDFKKAEMRMDEKHRKKVDKVMK 277
Query: 333 AWTILERLVNQNIYDDIAQDYRYWDDPSDEFREGMGSL 370
W LE N+ D ++ + F++ + SL
Sbjct: 278 EWGDLETRYNEQKAKDPKGAEKFKSQMNARFQKTVSSL 315
>U56966-8|AAK68242.1| 684|Caenorhabditis elegans Amyloid
precursor-like protein1, isoform b protein.
Length = 684
Score = 30.7 bits (66), Expect = 4.0
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 278 DYYQEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKH--VKSAQQIHDE---QLAQRIRE 332
D Y++DY+ + EK+E++P D ++ T +H K A+ DE + ++ +
Sbjct: 220 DAYEDDYSEESDEKDEEEPSSQ--DPYFKIANWTNEHDDFKKAEMRMDEKHRKKVDKVMK 277
Query: 333 AWTILERLVNQNIYDDIAQDYRYWDDPSDEFREGMGSL 370
W LE N+ D ++ + F++ + SL
Sbjct: 278 EWGDLETRYNEQKAKDPKGAEKFKSQMNARFQKTVSSL 315
>U00240-1|AAC46470.1| 680|Caenorhabditis elegans beta-amyloid
protein precursor protein.
Length = 680
Score = 30.7 bits (66), Expect = 4.0
Identities = 23/98 (23%), Positives = 45/98 (45%), Gaps = 7/98 (7%)
Query: 278 DYYQEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKH--VKSAQQIHDE---QLAQRIRE 332
D Y++DY+ + EK+E++P D ++ T +H K A+ DE + ++ +
Sbjct: 214 DAYEDDYSEESDEKDEEEPSSQ--DPYFKIANWTNEHDDFKKAEMRMDEKHRKKVDKVMK 271
Query: 333 AWTILERLVNQNIYDDIAQDYRYWDDPSDEFREGMGSL 370
W LE N+ D ++ + F++ + SL
Sbjct: 272 EWGDLETRYNEQKAKDPKGAEKFKSQMNARFQKTVSSL 309
>AJ011523-1|CAB38019.1| 760|Caenorhabditis elegans CHE-2 protein
protein.
Length = 760
Score = 30.7 bits (66), Expect = 4.0
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 563 DIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE 622
D+F V T DG I+ L N V H+ +N + +S D VK+W
Sbjct: 76 DVFAVSTSDGKINI--LSRNGKVENMVDAHNGAALCARWNSDGTGLLSS-GEDGFVKMWS 132
Query: 623 DGREEPLFMFELGAAVGDVKWAPYSSTVFAACTAD 657
+ + AV V W SS V C AD
Sbjct: 133 RSGMLRSVLAQFATAVYCVAWDSTSSNVL-YCNAD 166
>AF164430-1|AAF82632.1| 404|Caenorhabditis elegans LIS-1 protein.
Length = 404
Score = 30.7 bits (66), Expect = 4.0
Identities = 21/80 (26%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 587 RSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIW--EDGREEPLFMFELGAAVGDVKWA 644
+ + GH +P+ R+ ++ +I ASCS D +K+W E G+ E AV D+
Sbjct: 100 QKLTGHRLPITRVIFHPLW-TIMASCSEDATIKVWDYETGQLERTLKGHTD-AVNDIA-I 156
Query: 645 PYSSTVFAACTADGKVYVYD 664
+ +C++D + ++D
Sbjct: 157 DAAGKQLVSCSSDLSIKLWD 176
>AC006635-2|AAK68383.1| 760|Caenorhabditis elegans Abnormal
chemotaxis protein 2 protein.
Length = 760
Score = 30.7 bits (66), Expect = 4.0
Identities = 27/95 (28%), Positives = 36/95 (37%), Gaps = 4/95 (4%)
Query: 563 DIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWE 622
D+F V T DG I+ L N V H+ +N + +S D VK+W
Sbjct: 76 DVFAVSTSDGKINI--LSRNGKVENMVDAHNGAALCARWNSDGTGLLSS-GEDGFVKMWS 132
Query: 623 DGREEPLFMFELGAAVGDVKWAPYSSTVFAACTAD 657
+ + AV V W SS V C AD
Sbjct: 133 RSGMLRSVLAQFATAVYCVAWDSTSSNVL-YCNAD 166
>Z73906-10|CAB54209.1| 530|Caenorhabditis elegans Hypothetical
protein D2030.9b protein.
Length = 530
Score = 30.3 bits (65), Expect = 5.3
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 554 CICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCS 613
C+ F I + GT IH ++ R V H V + + +++ S
Sbjct: 232 CVKFSDSSEQI-VCGTSQYSIHVFDVEQRRRIRTIVNAHEDDVNSVCFADLGSNLIYSAG 290
Query: 614 GDWRVKIWE-----DGREEPLFMF 632
D VK+W+ DG EP+ +F
Sbjct: 291 DDGLVKVWDKRAWSDGDVEPVGVF 314
>Z73906-9|CAA98121.1| 571|Caenorhabditis elegans Hypothetical
protein D2030.9a protein.
Length = 571
Score = 30.3 bits (65), Expect = 5.3
Identities = 21/84 (25%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 554 CICFHPEKPDIFMVGTEDGMIHTCSLKYNRNYVRSVQGHHMPVYRINYNYFNNSIYASCS 613
C+ F I + GT IH ++ R V H V + + +++ S
Sbjct: 273 CVKFSDSSEQI-VCGTSQYSIHVFDVEQRRRIRTIVNAHEDDVNSVCFADLGSNLIYSAG 331
Query: 614 GDWRVKIWE-----DGREEPLFMF 632
D VK+W+ DG EP+ +F
Sbjct: 332 DDGLVKVWDKRAWSDGDVEPVGVF 355
>Z72502-5|CAA96589.1| 750|Caenorhabditis elegans Hypothetical
protein C08B6.7 protein.
Length = 750
Score = 30.3 bits (65), Expect = 5.3
Identities = 10/28 (35%), Positives = 16/28 (57%)
Query: 641 VKWAPYSSTVFAACTADGKVYVYDLNVN 668
++W P S +F A G +YVYD ++
Sbjct: 232 IRWLPGDSNIFLASYVSGNLYVYDQRIS 259
>Z68159-5|CAA92288.2| 472|Caenorhabditis elegans Hypothetical
protein C33D9.5 protein.
Length = 472
Score = 30.3 bits (65), Expect = 5.3
Identities = 21/111 (18%), Positives = 52/111 (46%), Gaps = 4/111 (3%)
Query: 279 YYQEDYARKQREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIREAWTILE 338
Y + R Q+ EE K + + +K RK+ ++ +K Q++ D Q ++ RE + E
Sbjct: 275 YKSSESERIQKLLEEQKAEILKEEEIK--RKELSEQIKKIQELKDRQNVEKDREIEDLKE 332
Query: 339 RLVNQNIYD--DIAQDYRYWDDPSDEFREGMGSLLPLWRFQFEPMRSHAVC 387
++ +++ ++ + + +D+ + + + P++ Q S + C
Sbjct: 333 KIGRKSVLSSTEVEKMAKIFDENYQKIVDAALNAGPMYNLQENLTNSDSCC 383
>Z79754-7|CAB02096.2| 387|Caenorhabditis elegans Hypothetical
protein F25H2.8 protein.
Length = 387
Score = 29.9 bits (64), Expect = 7.0
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 192 EPVADDLEATAGDVGEEPEGDEKDESKDTGEEVLEI 227
EP+ DD+ A G+V ++ E +E DE D E++E+
Sbjct: 138 EPIDDDM-AGDGEVDDDDEEEEDDEDADGDIEIVEM 172
>Z73424-5|CAA97782.3| 506|Caenorhabditis elegans Hypothetical
protein C44B9.5 protein.
Length = 506
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/60 (25%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 277 FDYYQEDYARKQREKEED----KPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIRE 332
FDY ++E+D P+R + N + RK+ +H+ +Q+ + + Q+ RE
Sbjct: 330 FDYPSSPITLHDEQEEQDLKLRTPERKTLQNEEAQRKQFGRHMSEREQLMKQLVDQKFRE 389
>AF537093-1|AAO85552.1| 387|Caenorhabditis elegans ubiquitin
conjugating enzyme UBC-25 protein.
Length = 387
Score = 29.9 bits (64), Expect = 7.0
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 1/36 (2%)
Query: 192 EPVADDLEATAGDVGEEPEGDEKDESKDTGEEVLEI 227
EP+ DD+ A G+V ++ E +E DE D E++E+
Sbjct: 138 EPIDDDM-AGDGEVDDDDEEEEDDEDADGDIEIVEM 172
>AC024211-1|AAF36065.1| 252|Caenorhabditis elegans Hypothetical
protein Y76B12C.4 protein.
Length = 252
Score = 29.9 bits (64), Expect = 7.0
Identities = 15/56 (26%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Query: 281 QEDYARKQREKEEDKPKRHPIDNL----KQLRKKTAKHVKSAQQIHDEQLAQRIRE 332
+++ A K++EKE++K K H + K+ K+ K K +++ +E+ ++ RE
Sbjct: 66 EKEAAEKEKEKEKEKEKTHEKNEADKEEKEAEKEEEKEEKPPKEVTEEKEKEKERE 121
>Z82257-1|CAB05120.2| 1043|Caenorhabditis elegans Hypothetical
protein C01C7.1 protein.
Length = 1043
Score = 29.5 bits (63), Expect = 9.3
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 515 QWAVMPGEL-QATTIITLTSN-VPPIPGPDGTMINVNSCGSCICFHPEKPDI 564
+W PG + Q+TT+ L+S+ PIP P G + V + G I K DI
Sbjct: 674 RWTRSPGAISQSTTLTALSSSRKDPIPAPRGPVAAVYARGKDIPTPASKSDI 725
>Z81109-7|CAB03241.1| 425|Caenorhabditis elegans Hypothetical
protein R10D12.10 protein.
Length = 425
Score = 29.5 bits (63), Expect = 9.3
Identities = 14/46 (30%), Positives = 24/46 (52%)
Query: 287 KQREKEEDKPKRHPIDNLKQLRKKTAKHVKSAQQIHDEQLAQRIRE 332
K+REKE+DK K D K+ K+ K ++ + ++I+E
Sbjct: 365 KEREKEKDKEKEKEKDKEKEKEKEKEKEKDKEKEREKRKSKEKIKE 410
>Z70783-8|CAA94859.1| 175|Caenorhabditis elegans Hypothetical
protein ZK856.11 protein.
Length = 175
Score = 29.5 bits (63), Expect = 9.3
Identities = 16/64 (25%), Positives = 32/64 (50%), Gaps = 2/64 (3%)
Query: 17 CFNQHAIQQKDAASKSRGN--LIEDEALEWLKPRALIKPDDQEDVPEADLDEEVGRVLTT 74
CF ++A++ A + + + +I+D+ L + + + +E E D+D+E T
Sbjct: 105 CFEENALKMTREAKRGQTSDKMIDDDMLPPSESEEEDESEGEETYDEDDVDDEEEEEFDT 164
Query: 75 INPN 78
NPN
Sbjct: 165 YNPN 168
>AL110490-1|CAB54439.1| 674|Caenorhabditis elegans Hypothetical
protein Y48B6A.1 protein.
Length = 674
Score = 29.5 bits (63), Expect = 9.3
Identities = 21/78 (26%), Positives = 32/78 (41%), Gaps = 1/78 (1%)
Query: 589 VQGHHMPVYRINYNYFNNSIYASCSGDWRVKIWEDGREEPLFMFELGAAVGDVKWAPYSS 648
++GH V I + AS D V+IW + F++ V V ++P +
Sbjct: 340 MRGHTGQVRAITVEPERGELLASGGEDGTVRIWMIATGRCIKTFQMDGEVTSVSFSPVAD 399
Query: 649 TVFAACTADGKVYVYDLN 666
A +GK YV LN
Sbjct: 400 RTLLAVAYEGK-YVAILN 416
>AJ271057-1|CAB65957.1| 1043|Caenorhabditis elegans Ack related
non-receptor tyrosinekinase protein.
Length = 1043
Score = 29.5 bits (63), Expect = 9.3
Identities = 19/52 (36%), Positives = 27/52 (51%), Gaps = 2/52 (3%)
Query: 515 QWAVMPGEL-QATTIITLTSN-VPPIPGPDGTMINVNSCGSCICFHPEKPDI 564
+W PG + Q+TT+ L+S+ PIP P G + V + G I K DI
Sbjct: 674 RWTRSPGAISQSTTLTALSSSRKDPIPAPRGPVAAVYARGKDIPTPASKSDI 725
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.319 0.136 0.421
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,233,852
Number of Sequences: 27539
Number of extensions: 918589
Number of successful extensions: 3591
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 3494
Number of HSP's gapped (non-prelim): 130
length of query: 763
length of database: 12,573,161
effective HSP length: 87
effective length of query: 676
effective length of database: 10,177,268
effective search space: 6879833168
effective search space used: 6879833168
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 63 (29.5 bits)
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