Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001941-TA|BGIBMGA001941-PA|undefined
(93 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
09_02_0081 - 4041364-4041555,4041830-4041911,4042192-4042443,404... 29 0.66
08_02_0550 + 18509365-18509589,18509668-18510644,18510828-185118... 29 0.66
03_02_0246 - 6772369-6772808,6773223-6775788 29 0.66
01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962 28 0.87
03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621 28 1.2
10_08_0386 + 17448803-17449067,17449704-17449708 27 2.0
10_08_0136 - 15122420-15122469,15123845-15124334,15124822-151249... 27 2.0
03_05_0024 - 19934529-19935298,19935359-19935871,19936147-199366... 27 2.0
01_07_0316 - 42696640-42697361,42697505-42697733 27 2.7
08_01_0106 - 762287-763393,763752-764414 26 3.5
02_02_0240 + 8196140-8198248,8198381-8198650 26 3.5
01_06_0967 + 33461902-33462106,33462829-33463250 26 3.5
01_01_0012 + 71903-72935,73468-73981,74619-76008 26 3.5
12_01_0365 + 2775020-2775259,2775388-2775465,2775576-2775641,277... 26 4.6
07_03_1716 + 28955395-28955775,28955858-28956091 26 4.6
01_06_0642 + 30811708-30811768,30812256-30812305,30812455-308129... 26 4.6
10_01_0146 - 1719997-1720386,1721498-1721515 25 6.1
09_03_0191 - 13322141-13322458,13322767-13323033,13324836-133250... 25 6.1
03_06_0382 - 33530943-33530966,33531160-33531360,33535494-33537026 25 6.1
12_02_0643 - 21461123-21461902 25 8.1
11_06_0184 - 21006659-21009823 25 8.1
06_03_1024 - 26958473-26958661,26958750-26958815,26959234-269593... 25 8.1
06_01_0921 + 7104923-7105396,7106624-7106768,7107078-7107121 25 8.1
01_03_0214 + 13863123-13863593,13863671-13864132,13864308-138650... 25 8.1
>09_02_0081 -
4041364-4041555,4041830-4041911,4042192-4042443,
4042529-4044001,4044222-4044733,4044824-4045021
Length = 902
Score = 28.7 bits (61), Expect = 0.66
Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 42 PPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQVS-RHPTRHAKHP 89
PP PP+ + RH PR+ S + + +P+ Q S PT+ P
Sbjct: 496 PPSPPEPPSPRHPPRQPTPPPSPSQQPPLPTPQPVQASPTSPTKQHAPP 544
>08_02_0550 +
18509365-18509589,18509668-18510644,18510828-18511802,
18511885-18512142,18512216-18512326,18512418-18512496,
18512595-18512687,18512773-18512958
Length = 967
Score = 28.7 bits (61), Expect = 0.66
Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 4/51 (7%)
Query: 42 PPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQVSRHPTRHAKHPHSA 92
P PP+ + RHQP + V ++ P + S P +HA P A
Sbjct: 497 PRDPPEDASPRHQPEKQVDQPEKQAD----EPELAKQSNQPEKHADEPELA 543
>03_02_0246 - 6772369-6772808,6773223-6775788
Length = 1001
Score = 28.7 bits (61), Expect = 0.66
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Query: 9 EACKTVKNEEKRRNVQMVGLFVVIVVVCRLRAGPPQPPDGVACRHQPRESVTSHSRERYT 68
E T+K +EK +V G+ ++ ++ R G + DGV H R VT S+E T
Sbjct: 856 EYAYTLKVDEKS-DVYSFGVVLLELIAGRKPVG--EFGDGVDIVHWVR-MVTGSSKEGVT 911
Query: 69 RILSPRDQQVSRHPTRH 85
+I PR V H H
Sbjct: 912 KIADPRLSTVPLHELTH 928
>01_05_0339 + 21135250-21135467,21136465-21137513,21137905-21138962
Length = 774
Score = 28.3 bits (60), Expect = 0.87
Identities = 11/40 (27%), Positives = 23/40 (57%)
Query: 54 QPRESVTSHSRERYTRILSPRDQQVSRHPTRHAKHPHSAR 93
+PR++ +SHS +R +++S H T ++ PH+ +
Sbjct: 673 EPRQARSSHSSRPASRPKPSGKKKISEHDTDKSRRPHTKK 712
>03_06_0338 + 33240111-33240860,33241248-33241536,33242494-33242621
Length = 388
Score = 27.9 bits (59), Expect = 1.2
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 42 PPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQVSRHPTR 84
PPQPP H+P +S T + + + SP+ P+R
Sbjct: 206 PPQPPRPQEVHHRPTKSYTGNPPQPLEKDASPQPPPPKPAPSR 248
Score = 27.1 bits (57), Expect = 2.0
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 7/47 (14%)
Query: 42 PPQPPDGVACRHQPRESVTSH----SRERYTRILSPRDQQVSRHPTR 84
PP PP+ H+P +S T H E+ PR Q+V PT+
Sbjct: 178 PPPPPEA---HHRPTKSYTGHPPPPPLEKDAPPQPPRPQEVHHRPTK 221
>10_08_0386 + 17448803-17449067,17449704-17449708
Length = 89
Score = 27.1 bits (57), Expect = 2.0
Identities = 11/23 (47%), Positives = 12/23 (52%)
Query: 37 RLRAGPPQPPDGVACRHQPRESV 59
R RAGP PP VA H P +
Sbjct: 34 RWRAGPTSPPPAVARNHAPMAEI 56
>10_08_0136 -
15122420-15122469,15123845-15124334,15124822-15124935,
15125022-15125303,15125422-15125591,15125670-15125757,
15126128-15126173,15126254-15126336,15126595-15126694,
15127002-15127081,15127200-15127283,15127373-15127531,
15128617-15128772,15129634-15130197
Length = 821
Score = 27.1 bits (57), Expect = 2.0
Identities = 10/48 (20%), Positives = 24/48 (50%)
Query: 46 PDGVACRHQPRESVTSHSRERYTRILSPRDQQVSRHPTRHAKHPHSAR 93
PD + P E ++ +++R+ ++ R+QQ + P + + H +
Sbjct: 721 PDDMEMSRSPPEHSSAGAKQRFQSLIESRNQQQNHKPHQEPEFNHQLK 768
>03_05_0024 -
19934529-19935298,19935359-19935871,19936147-19936635,
19936738-19937044,19937104-19937130
Length = 701
Score = 27.1 bits (57), Expect = 2.0
Identities = 19/55 (34%), Positives = 22/55 (40%), Gaps = 2/55 (3%)
Query: 41 GPPQPPDGVACRHQPRESVTSHSRERYTRILSPRD--QQVSRHPTRHAKHPHSAR 93
G PP HQP SV + R +R R RH RHA+ P S R
Sbjct: 172 GSRVPPLRSQDYHQPSLSVAASGSNRRSRGHVERSVHSPADRHRERHAEQPRSPR 226
>01_07_0316 - 42696640-42697361,42697505-42697733
Length = 316
Score = 26.6 bits (56), Expect = 2.7
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 24 QMVGLFVVIVVVCRLRAGPPQPP 46
Q+VG V+V VC + A QPP
Sbjct: 4 QLVGALAVLVAVCAVAAVQAQPP 26
>08_01_0106 - 762287-763393,763752-764414
Length = 589
Score = 26.2 bits (55), Expect = 3.5
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 1/27 (3%)
Query: 25 MVGLFVVIVVVCRLRAGPPQPPDGVAC 51
M+ L V++VV RL AG PP VAC
Sbjct: 4 MLPLLVILVVGLRL-AGASPPPQPVAC 29
>02_02_0240 + 8196140-8198248,8198381-8198650
Length = 792
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 42 PPQPPDGVACRHQPRESVTSHSR 64
PP PP G + +P +V +H+R
Sbjct: 22 PPPPPPGGGAKPEPPPTVATHTR 44
>01_06_0967 + 33461902-33462106,33462829-33463250
Length = 208
Score = 26.2 bits (55), Expect = 3.5
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 42 PPQPPDGVACRHQPRESVTSHSRER 66
PP PP G+ P +S+ + +R R
Sbjct: 164 PPPPPSGIEISPTPEQSINAAARPR 188
>01_01_0012 + 71903-72935,73468-73981,74619-76008
Length = 978
Score = 26.2 bits (55), Expect = 3.5
Identities = 12/26 (46%), Positives = 16/26 (61%)
Query: 56 RESVTSHSRERYTRILSPRDQQVSRH 81
RE + HSR+R +R S R + SRH
Sbjct: 814 REDESRHSRDRCSRHSSSRSHRSSRH 839
>12_01_0365 +
2775020-2775259,2775388-2775465,2775576-2775641,
2775736-2775834
Length = 160
Score = 25.8 bits (54), Expect = 4.6
Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 2/40 (5%)
Query: 38 LRAGPPQPPDGVACRHQPRESVTSHSRE--RYTRILSPRD 75
L A PP PP A +P +T +E R R+L+ R+
Sbjct: 57 LPAPPPPPPPATAYGTKPLHMLTEEEKEAKRLRRVLANRE 96
>07_03_1716 + 28955395-28955775,28955858-28956091
Length = 204
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/38 (31%), Positives = 19/38 (50%)
Query: 39 RAGPPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQ 76
R PPQP V CR P ++T+ + +P+D+
Sbjct: 47 RTLPPQPTVKVYCRANPNYAMTARNGAVVLAPANPKDE 84
>01_06_0642 +
30811708-30811768,30812256-30812305,30812455-30812926,
30813237-30813596,30813694-30814101,30814383-30814453,
30814553-30814629,30814741-30814888,30815878-30816039,
30816119-30816304
Length = 664
Score = 25.8 bits (54), Expect = 4.6
Identities = 12/41 (29%), Positives = 20/41 (48%)
Query: 40 AGPPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQVSR 80
A PP P + + + PR S SHS + ++ ++SR
Sbjct: 212 ASPPPPRNHIKPHYVPRSSARSHSNSTRASSGAGKNIEISR 252
>10_01_0146 - 1719997-1720386,1721498-1721515
Length = 135
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/33 (39%), Positives = 17/33 (51%)
Query: 37 RLRAGPPQPPDGVACRHQPRESVTSHSRERYTR 69
+LRA QP DG R + E T+ R R +R
Sbjct: 75 QLRAAEMQPDDGGQRRRRRSEPATTQPRRRASR 107
>09_03_0191 -
13322141-13322458,13322767-13323033,13324836-13325048,
13325153-13325349,13325432-13325636
Length = 399
Score = 25.4 bits (53), Expect = 6.1
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 42 PPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQVSRHPTRHAK 87
PP PP + C Q E + R+ +D ++R TR A+
Sbjct: 7 PPPPPQRLRCAVQHYEWGRRGAASIVARLADQQDPDLARADTRRAR 52
>03_06_0382 -
33530943-33530966,33531160-33531360,33535494-33537026
Length = 585
Score = 25.4 bits (53), Expect = 6.1
Identities = 16/48 (33%), Positives = 21/48 (43%)
Query: 37 RLRAGPPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQVSRHPTR 84
+LR G Q P +A P ++S R RI PRD+ P R
Sbjct: 26 KLRHGRLQEPRVMASPQAPPLPLSSLQESRSARIRIPRDEPRPTPPAR 73
>12_02_0643 - 21461123-21461902
Length = 259
Score = 25.0 bits (52), Expect = 8.1
Identities = 14/36 (38%), Positives = 18/36 (50%)
Query: 58 SVTSHSRERYTRILSPRDQQVSRHPTRHAKHPHSAR 93
+ TS S YTR + R V+ PT K P S+R
Sbjct: 162 AATSFSVSVYTRHAAKRAAAVTPPPTTKKKKPQSSR 197
>11_06_0184 - 21006659-21009823
Length = 1054
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/31 (29%), Positives = 17/31 (54%)
Query: 42 PPQPPDGVACRHQPRESVTSHSRERYTRILS 72
PP PDG QP +S ++++ R+++
Sbjct: 311 PPPQPDGGDTEQQPPQSDGGDKKQKHIRVVT 341
>06_03_1024 -
26958473-26958661,26958750-26958815,26959234-26959303,
26959526-26959773,26959938-26960029,26960726-26960871,
26961001-26961185,26961721-26961838,26961948-26962087
Length = 417
Score = 25.0 bits (52), Expect = 8.1
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 28 LFVVIVVVCRLRAGPPQPPDGV 49
L ++ CR PP PPDG+
Sbjct: 377 LLNLMEATCRRATAPPAPPDGL 398
>06_01_0921 + 7104923-7105396,7106624-7106768,7107078-7107121
Length = 220
Score = 25.0 bits (52), Expect = 8.1
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 42 PPQPPDGVACRHQPRESVTSHSRERYTRILSPRD 75
PP PP R + R + T R ++L PRD
Sbjct: 55 PPPPPPPPPARAERRGTGTGTVRVTRVKLLKPRD 88
>01_03_0214 +
13863123-13863593,13863671-13864132,13864308-13865038,
13865121-13865291,13865371-13865629,13866069-13866158
Length = 727
Score = 25.0 bits (52), Expect = 8.1
Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 4/38 (10%)
Query: 58 SVTSHSRERYTRILS----PRDQQVSRHPTRHAKHPHS 91
S+ + ER ++L+ PR + +PTRHA+H S
Sbjct: 244 SMNARVEERVNKVLADMNIPRGTTPAVYPTRHAQHDAS 281
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.321 0.132 0.408
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,252,383
Number of Sequences: 37544
Number of extensions: 129598
Number of successful extensions: 374
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 353
Number of HSP's gapped (non-prelim): 26
length of query: 93
length of database: 14,793,348
effective HSP length: 70
effective length of query: 23
effective length of database: 12,165,268
effective search space: 279801164
effective search space used: 279801164
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 52 (25.0 bits)
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