GeneModel BLAST Result against human

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001941-TA|BGIBMGA001941-PA|undefined
         (93 letters)

Database: human 
           224,733 sequences; 73,234,838 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK097452-1|BAC05058.1|  225|Homo sapiens protein ( Homo sapiens ...    32   0.25 
AY423763-1|AAR03710.1|  642|Homo sapiens actinfilin protein.           30   1.0  
AL645608-6|CAI15569.1|  642|Homo sapiens kelch-like 17 (Drosophi...    30   1.0  
U05596-1|AAA50748.1| 1232|Homo sapiens anion exchanger 3 brain i...    29   1.8  
AY142112-1|AAN34939.1| 1259|Homo sapiens anion exchanger SLC4A3 ...    29   1.8  
AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhe...    28   4.1  
BC018784-1|AAH18784.1|  112|Homo sapiens Unknown (protein for IM...    28   5.4  
AY358122-1|AAQ88489.1|  877|Homo sapiens ENWT2803 protein.             28   5.4  
AL356356-12|CAI15499.1|  877|Homo sapiens ADAMTS-like 4 protein.       28   5.4  
BC094811-1|AAH94811.1|  602|Homo sapiens ADAMTSL4 protein protein.     27   9.5  
BC071852-1|AAH71852.1|  602|Homo sapiens ADAMTSL4 protein protein.     27   9.5  
BC027478-1|AAH27478.1|  424|Homo sapiens ADAMTSL4 protein protein.     27   9.5  
AL356356-13|CAI15500.2| 1074|Homo sapiens ADAMTS-like 4 protein.       27   9.5  

>AK097452-1|BAC05058.1|  225|Homo sapiens protein ( Homo sapiens
           cDNA FLJ40133 fis, clone TESTI2012231. ).
          Length = 225

 Score = 32.3 bits (70), Expect = 0.25
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 53  HQPRESVTSHSRERYTRILSPRDQQVSRHPTRHAKHPHS 91
           H PR  +T HS+ ++T ++         H T+H  H H+
Sbjct: 80  HTPRTHITHHSQTQHTLLIHQSYTHTPTHHTQHKPHMHT 118


>AY423763-1|AAR03710.1|  642|Homo sapiens actinfilin protein.
          Length = 642

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 42 PPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQVSRHPTRH 85
          PPQPP   A R +PR++  +   E   ++LS     V+ +  RH
Sbjct: 31 PPQPPAPEAERTRPRQARPAAPMEGAVQLLSREGHSVAHNSKRH 74


>AL645608-6|CAI15569.1|  642|Homo sapiens kelch-like 17
          (Drosophila) protein.
          Length = 642

 Score = 30.3 bits (65), Expect = 1.0
 Identities = 15/44 (34%), Positives = 23/44 (52%)

Query: 42 PPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQVSRHPTRH 85
          PPQPP   A R +PR++  +   E   ++LS     V+ +  RH
Sbjct: 31 PPQPPAPEAERTRPRQARPAAPMEGAVQLLSREGHSVAHNSKRH 74


>U05596-1|AAA50748.1| 1232|Homo sapiens anion exchanger 3 brain
          isoform protein.
          Length = 1232

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 65 ERYTRILSPRDQQVSRHPTRHAKHPHSAR 93
          E+ +R  S RD +  RH + H  HP SAR
Sbjct: 60 EKPSRSYSERDFEFHRHTSHHTHHPLSAR 88


>AY142112-1|AAN34939.1| 1259|Homo sapiens anion exchanger SLC4A3
          protein.
          Length = 1259

 Score = 29.5 bits (63), Expect = 1.8
 Identities = 13/29 (44%), Positives = 17/29 (58%)

Query: 65 ERYTRILSPRDQQVSRHPTRHAKHPHSAR 93
          E+ +R  S RD +  RH + H  HP SAR
Sbjct: 60 EKPSRSYSERDFEFHRHTSHHTHHPLSAR 88


>AF289030-1|AAL56711.1| 1746|Homo sapiens Down syndrome cell adhesion
            molecule splice variant protein.
          Length = 1746

 Score = 28.3 bits (60), Expect = 4.1
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 7/56 (12%)

Query: 35   VCRLRAGPPQPPDG-------VACRHQPRESVTSHSRERYTRILSPRDQQVSRHPT 83
            +CR  A PP+P DG       V   H+P    TS         L P+  +  + PT
Sbjct: 1620 ICRFTASPPKPQDGGRVMNMAVPKAHRPGGPGTSRDLSLGQACLEPQKSRTLKRPT 1675


>BC018784-1|AAH18784.1|  112|Homo sapiens Unknown (protein for
          IMAGE:4873970) protein.
          Length = 112

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 16/46 (34%), Positives = 22/46 (47%), Gaps = 1/46 (2%)

Query: 43 PQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQVSRHPTRHAKH 88
          P  P G ACR  PR  V + +R R   + +PR + V   P+    H
Sbjct: 10 PVLPAGAACRRGPRPHV-NQARRRSPALETPRRKAVLLAPSSARPH 54


>AY358122-1|AAQ88489.1|  877|Homo sapiens ENWT2803 protein.
          Length = 877

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 18  EKRRNVQMVGLFVVIVVVCRLRAGPPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQ 77
           ++ R V+ VG     V      +GPPQPP   AC   P  +   HS   ++  +SP    
Sbjct: 803 QRSRQVRCVGNNGDEVSEQECASGPPQPPSREACDMGPCTTAWFHS--DWSSKVSPEPPA 860

Query: 78  VSRHPTRHAK 87
           +S     HA+
Sbjct: 861 ISCILGNHAQ 870


>AL356356-12|CAI15499.1|  877|Homo sapiens ADAMTS-like 4 protein.
          Length = 877

 Score = 27.9 bits (59), Expect = 5.4
 Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 18  EKRRNVQMVGLFVVIVVVCRLRAGPPQPPDGVACRHQPRESVTSHSRERYTRILSPRDQQ 77
           ++ R V+ VG     V      +GPPQPP   AC   P  +   HS   ++  +SP    
Sbjct: 803 QRSRQVRCVGNNGDEVSEQECASGPPQPPSREACDMGPCTTAWFHS--DWSSKVSPEPPA 860

Query: 78  VSRHPTRHAK 87
           +S     HA+
Sbjct: 861 ISCILGNHAQ 870


>BC094811-1|AAH94811.1|  602|Homo sapiens ADAMTSL4 protein protein.
          Length = 602

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 18  EKRRNVQMVGLFVVIVVVCRLRAGPPQPPDGVACRHQPRESVTSHS 63
           ++ R V+ VG     V      +GPPQPP   AC   P  +   HS
Sbjct: 331 QRSRQVRCVGNNGDEVSEQECASGPPQPPSREACDMGPCTTAWFHS 376


>BC071852-1|AAH71852.1|  602|Homo sapiens ADAMTSL4 protein protein.
          Length = 602

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 18  EKRRNVQMVGLFVVIVVVCRLRAGPPQPPDGVACRHQPRESVTSHS 63
           ++ R V+ VG     V      +GPPQPP   AC   P  +   HS
Sbjct: 331 QRSRQVRCVGNNGDEVSEQECASGPPQPPSREACDMGPCTTAWFHS 376


>BC027478-1|AAH27478.1|  424|Homo sapiens ADAMTSL4 protein protein.
          Length = 424

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 18  EKRRNVQMVGLFVVIVVVCRLRAGPPQPPDGVACRHQPRESVTSHS 63
           ++ R V+ VG     V      +GPPQPP   AC   P  +   HS
Sbjct: 153 QRSRQVRCVGNNGDEVSEQECASGPPQPPSREACDMGPCTTAWFHS 198


>AL356356-13|CAI15500.2| 1074|Homo sapiens ADAMTS-like 4 protein.
          Length = 1074

 Score = 27.1 bits (57), Expect = 9.5
 Identities = 16/46 (34%), Positives = 21/46 (45%)

Query: 18  EKRRNVQMVGLFVVIVVVCRLRAGPPQPPDGVACRHQPRESVTSHS 63
           ++ R V+ VG     V      +GPPQPP   AC   P  +   HS
Sbjct: 803 QRSRQVRCVGNNGDEVSEQECASGPPQPPSREACDMGPCTTAWFHS 848


  Database: human
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 73,234,838
  Number of sequences in database:  224,733
  
Lambda     K      H
   0.321    0.132    0.408 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,875,056
Number of Sequences: 224733
Number of extensions: 643156
Number of successful extensions: 1585
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1580
Number of HSP's gapped (non-prelim): 13
length of query: 93
length of database: 73,234,838
effective HSP length: 70
effective length of query: 23
effective length of database: 57,503,528
effective search space: 1322581144
effective search space used: 1322581144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.9 bits)
S2: 57 (27.1 bits)