Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001939-TA|BGIBMGA001939-PA|undefined
(789 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|ch... 33 0.15
SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex su... 32 0.27
SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|c... 32 0.35
SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces po... 31 0.47
SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein Ph... 30 1.1
SPBC947.11c |elg1||DNA replication factor C complex subunit Elg1... 30 1.4
SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr 3... 30 1.4
SPBC23E6.07c |rfc1||DNA replication factor C complex subunit Rfc... 30 1.4
SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 29 1.9
SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8 |Schizosacch... 29 1.9
SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18 |Sch... 29 2.5
SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr ... 29 2.5
SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3 Brl2|Schizosa... 29 3.3
SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual 29 3.3
SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynei... 29 3.3
SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces... 29 3.3
SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyce... 29 3.3
SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces pomb... 28 4.4
SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr... 28 4.4
SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyce... 28 4.4
SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomy... 28 4.4
SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual 28 5.8
SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces ... 28 5.8
SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr... 28 5.8
SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated heterochr... 28 5.8
SPAC2G11.15c |tgs1|SPAC521.01c|RNA methyltransferase Tgs1 |Schiz... 28 5.8
SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr ... 28 5.8
SPBC649.05 |cut12|stf1|spindle pole body protein Cut12 |Schizosa... 27 7.6
SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces pom... 27 7.6
SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyce... 27 7.6
SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase Ubp10|Schizosa... 27 7.6
SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces... 27 7.6
SPAC17A5.09c |||protein phosphatase regulatory subunit Glc9|Schi... 27 7.6
>SPAC6G9.06c |pcp1||pericentrin Pcp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1208
Score = 33.1 bits (72), Expect = 0.15
Identities = 22/80 (27%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 551 ESLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTRSKMKN 610
ESL +K DKN D K +V + N K T R++ F ++ + + +
Sbjct: 212 ESLLQKSEDKNFKLEEKVDYLSKVNDVEQSQNVKVFTERIR----FLENALEKVQREKDS 267
Query: 611 LKTLPDPDVSNKNIDLLWQL 630
L T + D SNK +D +++
Sbjct: 268 LSTEMEEDKSNKEVDYEYEI 287
>SPAC6F12.16c |mtr4||ATP-dependent RNA helicase, TRAMP complex
subunit Mtr4|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1117
Score = 32.3 bits (70), Expect = 0.27
Identities = 23/74 (31%), Positives = 40/74 (54%), Gaps = 6/74 (8%)
Query: 556 KENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTRSKMKNLK--- 612
KE KN SQN S ++ + +TD N S + K+E++ + R+K++NLK
Sbjct: 22 KEESKN-SQN-SQNSQKIKRTLTDKNASNQEQGTKKLESSVGEQESATKRAKIENLKDNQ 79
Query: 613 -TLPDPDVSNKNID 625
+P+ DV+ +I+
Sbjct: 80 DLIPNNDVNGIHIN 93
>SPAC26A3.15c |nsp1||nucleoporin Nsp1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 598
Score = 31.9 bits (69), Expect = 0.35
Identities = 37/188 (19%), Positives = 74/188 (39%), Gaps = 3/188 (1%)
Query: 59 PGTEENKTVVNLNPIRSFKHSLHRNQNGASYSIESTLEQHPKKDIENANKNFLLDQWIAK 118
P T+ + P+ K + + GA+ S +T + P I++ +L++W
Sbjct: 377 PATDTTTSTSKTGPLFGNKPADPSAKPGATAS--TTPSEPPPSSIKHKTLQEILNKWSTD 434
Query: 119 IGVPTLSSGSFGNNGCDASGIEIYSVENTPQTLKQDNQGQNISNKINCKHKKILICSPTE 178
+ T + D + + + + + + +SN+I+ + + S E
Sbjct: 435 LTTQTEVFNKLCDQVSDWDRTLVDNGALISKLYTETVEAEQMSNRID-DGLEYVSSSQQE 493
Query: 179 LTLKLSAGENIESNIDEITSSNLNSNKRRAICSSDDLSDDLTNMNFDVCAIVNEDIMKIL 238
L L + E D +S LN + RA +DD+ L + D+ ++N+
Sbjct: 494 LFKLLDSYETQLETFDGRATSALNVERERAFGVADDILSRLDRLGEDLGTVINQMNDFSK 553
Query: 239 KNDQCSEI 246
+D SEI
Sbjct: 554 PDDSISEI 561
>SPAC27D7.13c |ssm4|SPAC637.01c|p150-Glued|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 670
Score = 31.5 bits (68), Expect = 0.47
Identities = 22/81 (27%), Positives = 37/81 (45%), Gaps = 2/81 (2%)
Query: 547 SNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTRS 606
S++ + L E N + Q SY+ N +T + +TL+ + E N N +
Sbjct: 519 SSMKDDLTEM-NQRLKEQIESYE-NEVNSEITSRTLKEFETLKTQYEKNLCNLREQLKTA 576
Query: 607 KMKNLKTLPDPDVSNKNIDLL 627
+MK P D +++NID L
Sbjct: 577 RMKLADKYPQGDNTSENIDWL 597
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/67 (29%), Positives = 31/67 (46%)
Query: 145 ENTPQTLKQDNQGQNISNKINCKHKKILICSPTELTLKLSAGENIESNIDEITSSNLNSN 204
E T +TLK+ + K C ++ L + +L K G+N NID + S +SN
Sbjct: 546 EITSRTLKEFETLKTQYEKNLCNLREQLKTARMKLADKYPQGDNTSENIDWLKHSLRDSN 605
Query: 205 KRRAICS 211
+I S
Sbjct: 606 TENSIPS 612
>SPAC30D11.08c |phf2|swp2, saf60|PHD finger containing protein
Phf2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 538
Score = 30.3 bits (65), Expect = 1.1
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 7/74 (9%)
Query: 83 NQNGASYSIESTLE--QHPKKDIENANKNFLLDQWIAKIGVPTLSSGSFGNNGCDASGIE 140
NQNG S I+ + Q+P N N N L+ P SG+FG+ D E
Sbjct: 44 NQNGGSVLIDQAFQDIQNP-----NVNSNMHLENQFQHFHEPNKESGAFGSYKNDDVAKE 98
Query: 141 IYSVENTPQTLKQD 154
I S +N K +
Sbjct: 99 IESSKNQETDAKSE 112
>SPBC947.11c |elg1||DNA replication factor C complex subunit
Elg1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 920
Score = 29.9 bits (64), Expect = 1.4
Identities = 14/54 (25%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 447 ICTDDSFSVVDANKDAIHL-EPIMEELDDLTDMDITNKKRLNSESSLVATIDEI 499
IC + +F VV+ + + ++E + +LT I +K RLN+ ++ ++E+
Sbjct: 445 ICRELNFEVVEIHPGMRRSGKELLERIGELTQSHIVDKSRLNNTPDILILLEEV 498
>SPCC1620.07c |||lunapark homolog|Schizosaccharomyces pombe|chr
3|||Manual
Length = 334
Score = 29.9 bits (64), Expect = 1.4
Identities = 25/93 (26%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Query: 549 IMESLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTRSKM 608
I +SL E D N+ NPS + K N +T + + N S K
Sbjct: 235 IDKSLPSSEMDSNLQTNPSSISKGKKNNSNNTTQKGPNII--SSPQVINASSPVRKAGKK 292
Query: 609 KNLKTLPDPDVSNKNIDLLWQLVSGNATTANGS 641
K+ K LP +S+ + D + VS + T S
Sbjct: 293 KSKKALPTSPLSSSSPDASYNSVSDSFHTVAAS 325
>SPBC23E6.07c |rfc1||DNA replication factor C complex subunit
Rfc1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 934
Score = 29.9 bits (64), Expect = 1.4
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 556 KENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTRSKMKNLKTLP 615
K ++K+I P +D + L+ + S T+ K+E FN+H +Y + L T P
Sbjct: 604 KNSEKHIVMKP-WDICSRYLHGGMFHPSSKSTINDKLELYFNDHEFSYLMVQENYLNTTP 662
Query: 616 D 616
D
Sbjct: 663 D 663
>SPBC428.10 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 751
Score = 29.5 bits (63), Expect = 1.9
Identities = 45/190 (23%), Positives = 73/190 (38%), Gaps = 19/190 (10%)
Query: 480 ITNKKRLNSESSLVAT-IDEIRKSTVT------NSPRNLYHRGDHLWDSPQPTASNLDPI 532
IT K L +S+ + T I + K TV N + R + + P
Sbjct: 120 ITPKASLEQQSNNIPTGIQDSSKYTVNGPTERDNKSMKSFVRSFFTSTDSSVADTTIIPS 179
Query: 533 LSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKI 592
+++ K+PS S+I + + KE+ S + +T + +N T + +++
Sbjct: 180 MTQQFDKDPSTLVQSSIDKEIQVKEDGTTSSVAVNAETAVQNVNGTIKESQGTESISFAS 239
Query: 593 ENN------FNNHSTNYTRSKMK---NLKTLPDPDVSNKNIDLLWQLVSGNATTANGSND 643
+NN NN + SK K N T P+ D+ D +L TANGS
Sbjct: 240 KNNSAPSADANNGNMTKLVSKEKAFLNTVTTPNADLIISEED---ELTEMTLRTANGSEP 296
Query: 644 YVSMNRMSTS 653
NR S
Sbjct: 297 TKKSNRSEQS 306
>SPBC3D6.11c |slx8||ubiquitin-protein ligase E3 Slx8
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 269
Score = 29.5 bits (63), Expect = 1.9
Identities = 32/134 (23%), Positives = 56/134 (41%), Gaps = 8/134 (5%)
Query: 494 ATIDEIRKSTVTNSPRNLYHRGDHLWDSPQPTASNLDPILSEALWKEPSKFHPSNIMESL 553
A I+ R S V NSP N + + D P T S + S L + P + L
Sbjct: 32 AAINRRRSSPVENSPGNGFPVSEDATDYPSGTTSENE---SLPLNRAPRSLR--EVASEL 86
Query: 554 AEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTRSKMKNLKT 613
A++E + + + D + ++ D N ++D + +NNH + S + N+ +
Sbjct: 87 AQEETLPVETSDLNIDVESEVFDLEDI-NFQNDADDINQRFTYNNHPASVENS-LTNVNS 144
Query: 614 L-PDPDVSNKNIDL 626
+ P + IDL
Sbjct: 145 IHAQPTTISDMIDL 158
>SPAPB18E9.02c |ppk18||serine/threonine protein kinase Ppk18
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1316
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/94 (24%), Positives = 41/94 (43%), Gaps = 3/94 (3%)
Query: 133 GCDASGIEIYSVENTPQTLKQDNQGQNISNKINCKHKKILICSPTELTLKLSAGENIESN 192
G D ++Y + T NQG N S+ + K I S E K +++
Sbjct: 1071 GSDMPSAKLYDQQLTLSPSLMTNQGSNFSSTDSTPRKSI-NSSDVESRSKTDGPKSMHDL 1129
Query: 193 IDEITSSNLNSNKRRAICSSDDLSDDLTNMNFDV 226
I ++ +S+ ++ SS+ SDDL N++ +
Sbjct: 1130 IKQLHMRKHSSHTNQSTGSSE--SDDLFNLDLPI 1161
>SPAC57A7.05 |||conserved protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1337
Score = 29.1 bits (62), Expect = 2.5
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 527 SNLDPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTN-RKTLNVTDTNNSKH 585
S+ +P+ E + EPS PS S EK+N ++I Q PS+ N + + + + +S+H
Sbjct: 92 SSANPVTFE-IADEPS---PS-FNHSFFEKDNARDIPQQPSHSQNPSSSSSSSSSQSSQH 146
Query: 586 DT-LRMKIENN 595
T L+ +I +N
Sbjct: 147 STHLQFQIPSN 157
>SPCC970.10c |brl2|rfp1|ubiquitin-protein ligase E3
Brl2|Schizosaccharomyces pombe|chr 3|||Manual
Length = 680
Score = 28.7 bits (61), Expect = 3.3
Identities = 17/69 (24%), Positives = 34/69 (49%)
Query: 564 QNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTRSKMKNLKTLPDPDVSNKN 623
QN ++ ++L + D+N ++ D L M+ EN NN T + L ++++
Sbjct: 247 QNGLMESRSQSLKILDSNVNEMDKLIMERENALNNVETTNLKKYSSFLALKEAVSMTSEQ 306
Query: 624 IDLLWQLVS 632
+ +L L+S
Sbjct: 307 LRVLEHLLS 315
>SPCC737.08 |||midasin |Schizosaccharomyces pombe|chr 3|||Manual
Length = 4717
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/98 (20%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 470 EELDDLTDMDITNKKRLNSESSLVATIDEIRKSTVTNSPRNLYHRGDHLWDSPQPTASNL 529
E+ + +D+D + + L S+ + V + ++ ++S + + D P+ +++L
Sbjct: 3940 EDTANQSDLDESEARELESDMNGVTKDSVVSENENSDSEEENQDLDEEVNDIPEDLSNSL 3999
Query: 530 DPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNPS 567
+ E LW EP++ +++E+ +K N+++ + N S
Sbjct: 4000 N----EKLWDEPNE---EDLLET-EQKSNEQSAANNES 4029
>SPBC216.02 |mcp5|num1, mug21|cortical anchoring factor for dynein
Mcp5/Num1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 968
Score = 28.7 bits (61), Expect = 3.3
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 4/91 (4%)
Query: 539 KEPSKFHPSNIMESLAEKENDKN--ISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIEN-- 594
K P + H E +A+ KN I+ S +T+ TL++ ++ + T M ++
Sbjct: 688 KIPYQEHDWEQWEKIAQSSMFKNRSIASRQSLETSDVTLDINMSSRHSNGTSSMLFKDFT 747
Query: 595 NFNNHSTNYTRSKMKNLKTLPDPDVSNKNID 625
NN + S KN +T P +V D
Sbjct: 748 KHNNWEASTYPSAPKNTRTYPTAEVEKTRHD 778
>SPAC14C4.05c |mug61||Sad1 interacting factor|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 844
Score = 28.7 bits (61), Expect = 3.3
Identities = 28/106 (26%), Positives = 48/106 (45%), Gaps = 11/106 (10%)
Query: 545 HPSNIMESLA--EKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTN 602
+PSN++ ++ +D + N S+D + ++ T NS++ T ENN S +
Sbjct: 288 NPSNLLSVRKNFQQSSDSYLKSNKSFDQLNNLVGLS-TGNSENFTP----ENN----SFS 338
Query: 603 YTRSKMKNLKTLPDPDVSNKNIDLLWQLVSGNATTANGSNDYVSMN 648
+T K + LP S+ ++ L QL NA+ N S N
Sbjct: 339 WTHPKKNSSSPLPQSQSSSIFVEHLNQLYEANASIHRPVNPAFSTN 384
>SPAC1F3.06c |spo15||sporulation protein Spo15|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1957
Score = 28.7 bits (61), Expect = 3.3
Identities = 20/88 (22%), Positives = 42/88 (47%), Gaps = 4/88 (4%)
Query: 158 QNISN--KINCKHKKILICSPTELTLKLSAGENIESNIDEITS--SNLNSNKRRAICSSD 213
+ ISN + N + + ++L LS +E++I+ + + S + + + S++
Sbjct: 955 EEISNLKEENMSQSQAITSVKSKLDETLSKSSKLEADIEHLKNKVSEVEVERNALLASNE 1014
Query: 214 DLSDDLTNMNFDVCAIVNEDIMKILKND 241
L DDL N ++ ++ E K +ND
Sbjct: 1015 RLMDDLKNNGENIASLQTEIEKKRAEND 1042
>SPBC30D10.15 |||snoRNP assembly factor |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 516
Score = 28.3 bits (60), Expect = 4.4
Identities = 16/44 (36%), Positives = 21/44 (47%)
Query: 189 IESNIDEITSSNLNSNKRRAICSSDDLSDDLTNMNFDVCAIVNE 232
I I E+T SN + K A SSD SD +N +F + E
Sbjct: 166 IADEIAEVTHSNSSIGKSSADLSSDSSSDSESNTSFSETDVEEE 209
>SPBC215.06c |||human LYHRT homolog|Schizosaccharomyces pombe|chr
2|||Manual
Length = 178
Score = 28.3 bits (60), Expect = 4.4
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 145 ENTPQTLKQDNQGQNISNKINCKHKKILICSPTELTLKLSAGENI 189
+NTP + + +N +K N K KK + SP E L L+ + I
Sbjct: 89 QNTPAGPTKHSLDENEKDKENKKSKKETVSSPAEQLLALTQNQEI 133
>SPAPB15E9.01c ||SPAPB18E9.06c|sequence orphan|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1036
Score = 28.3 bits (60), Expect = 4.4
Identities = 23/88 (26%), Positives = 38/88 (43%), Gaps = 5/88 (5%)
Query: 566 PSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTRSKMKNLKTLPDPDVSNKNID 625
PSY + +N T NS + T+ + + T T +L T+ ++ +
Sbjct: 914 PSYSNTTQGMNTTSIWNSSNSTIVSNVTATITGNVTITT----GDLTTIDPTTFTSTYLS 969
Query: 626 LLWQLVSGNATTANGSNDYVSMNRMSTS 653
+Q VS N T +GS+D V S+S
Sbjct: 970 SGFQTVS-NTTATSGSDDDVKTASTSSS 996
>SPAC6G9.12 |cfr1||Chs five related protein Cfr1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 620
Score = 28.3 bits (60), Expect = 4.4
Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 7/46 (15%)
Query: 531 PILSEALWKEPSKFHPSNIMESLAEKENDKNI-----SQNPSYDTN 571
P +SE L EP K H +N+ + +KE D NI S P+ D N
Sbjct: 555 PQVSEVL--EPEKAHTTNLQLNALDKEEDLNITTVKQSSEPTADDN 598
>SPAC17H9.01 |cid16||poly|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1202
Score = 27.9 bits (59), Expect = 5.8
Identities = 13/51 (25%), Positives = 28/51 (54%)
Query: 564 QNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTRSKMKNLKTL 614
Q P+ D +++ V++T N+K++T +K + TN+T ++ K +
Sbjct: 659 QLPNVDLLKESEAVSETKNTKNNTFILKSDLKEEERLTNFTIEEINKHKAI 709
>SPCC4G3.14 |mdj1||DNAJ domain protein Mdj1 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 528
Score = 27.9 bits (59), Expect = 5.8
Identities = 12/43 (27%), Positives = 21/43 (48%)
Query: 545 HPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDT 587
H +++E LA+ ND + S + + T + +SKH T
Sbjct: 442 HERSLLEQLADALNDSTARRTQSSPSGTNSSTSTSSTSSKHST 484
>SPBP35G2.14 |||RNA-binding protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1060
Score = 27.9 bits (59), Expect = 5.8
Identities = 24/98 (24%), Positives = 40/98 (40%), Gaps = 9/98 (9%)
Query: 547 SNIMESL-AEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTR 605
SNI SL +E E N+ +N DT T+ ++ N + NFN T +
Sbjct: 65 SNISSSLRSEMEMSNNLLKNTQNDTWTSTVGLSVPENQE--------AMNFNEGPTGISS 116
Query: 606 SKMKNLKTLPDPDVSNKNIDLLWQLVSGNATTANGSND 643
KN ++ +N N+ + G ++ + S D
Sbjct: 117 IASKNNSSITSKLQNNSNLSVTSSANRGRTSSVSSSYD 154
>SPCC1739.03 |hrr1||Helicase Required for RNAi-mediated
heterochromatin assembly Hrr1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1015
Score = 27.9 bits (59), Expect = 5.8
Identities = 17/70 (24%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 559 DKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNF-NNHSTNYTRSKMKNLKTLPD- 616
DKN+ +N S R N + +N K + + F N H S + L ++P
Sbjct: 80 DKNLKENKSIRRKRSIDNDYELSNVKRNDITSGKNREFENEHHPASDTSSWRELPSIPTL 139
Query: 617 PDVSNKNIDL 626
++++K+++L
Sbjct: 140 EELTSKSVEL 149
>SPAC2G11.15c |tgs1|SPAC521.01c|RNA methyltransferase Tgs1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 239
Score = 27.9 bits (59), Expect = 5.8
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 4/63 (6%)
Query: 409 ELKNAILAAPPFPKKTHTY----SNVFVKFDKGSQDDYANSTICTDDSFSVVDANKDAIH 464
EL + PP PK Y N+F +FD+G DY + T + +V A
Sbjct: 11 ELLKKCIICPPVPKALKKYWNNRYNLFSRFDEGIWLDYQSWYSVTPEKVAVAIAKSVVDF 70
Query: 465 LEP 467
++P
Sbjct: 71 IQP 73
>SPBC17D1.07c |||GTPase regulator |Schizosaccharomyces pombe|chr
2|||Manual
Length = 962
Score = 27.9 bits (59), Expect = 5.8
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 4/42 (9%)
Query: 552 SLAEKENDKNISQNPS----YDTNRKTLNVTDTNNSKHDTLR 589
SL + + K+I +NP +DTN K+ + T N KH L+
Sbjct: 804 SLKKNNSQKDIHRNPLLSHVFDTNTKSFDTLKTLNYKHAILK 845
>SPBC649.05 |cut12|stf1|spindle pole body protein Cut12
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 548
Score = 27.5 bits (58), Expect = 7.6
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 11/117 (9%)
Query: 536 ALWKEPSKFHPSNIMESLAEKEND----KNISQNPSYDTNRKTLNVTDT-NNSKHDTLRM 590
A W P+K +N + + + EN + T + +N D N SKHD
Sbjct: 95 ATWNRPTK---NNFLFTRLDDENPLMGHEEFKSPLLQSTPKPNINNPDNENKSKHDEFDN 151
Query: 591 KIENNFNNHSTNYTRSKMKNLKTLPDPDVSNKNIDLLWQLVSGNATTANGSNDYVSM 647
+ N N N T+S + + +P ++D +S +N +ND+ S+
Sbjct: 152 RYNININESYKNETKSNQRLGEDVPSKKKYPHSMD---AEISKFKWDSNNNNDWSSL 205
>SPBC19C7.03 |cyr1|git2|adenylate cyclase|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1692
Score = 27.5 bits (58), Expect = 7.6
Identities = 13/28 (46%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Query: 596 FNNHS-TNYTRSKMKNLKTLPDPDVSNK 622
F+ H TN+T+S +KNLK L D++ K
Sbjct: 944 FSEHEDTNFTKSYLKNLKFLSIMDLNTK 971
>SPAC3H1.12c |snt2||Lid2 complex subunit Snt2 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1131
Score = 27.5 bits (58), Expect = 7.6
Identities = 20/79 (25%), Positives = 34/79 (43%), Gaps = 5/79 (6%)
Query: 535 EALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDT---NRKTLNVTDTNNSKHDTLRMK 591
+A W S H + + + N ++ +NP T + TL T N K DT++
Sbjct: 736 KADWDHLSN-HDNEVKKENNRIRNASSLMENPRVSTKTFDNFTLTHDSTINVKADTVKRA 794
Query: 592 IENNF-NNHSTNYTRSKMK 609
+NN N N++ + K
Sbjct: 795 RQNNIKNKDDVNFSEDRKK 813
>SPBC577.07 |ubp10||ubiquitin C-terminal hydrolase
Ubp10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 502
Score = 27.5 bits (58), Expect = 7.6
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 302 QDADIENIQRIALDILKEM-----YAKKGKKSNANPDFFTKSRELDTPTEILSVHDYENI 356
+D +I+N +R L++ K+M A K + + +++ LDT L D+E +
Sbjct: 17 EDNNIDNGKRKKLELGKDMEDVHDIASKEMEEHETTPIISQNLYLDTINRKLLDFDFEKV 76
Query: 357 CAVNI 361
C+V++
Sbjct: 77 CSVSL 81
>SPBC21B10.07 |||glycosyl hydrolase family 16|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 419
Score = 27.5 bits (58), Expect = 7.6
Identities = 15/46 (32%), Positives = 19/46 (41%)
Query: 570 TNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTRSKMKNLKTLP 615
TN N TDT HD +++N NN + K K LP
Sbjct: 37 TNDVIDNHTDTEIDDHDNDHENLDSNNNNENNEAFNEKAAEKKLLP 82
>SPAC17A5.09c |||protein phosphatase regulatory subunit
Glc9|Schizosaccharomyces pombe|chr 1|||Manual
Length = 310
Score = 27.5 bits (58), Expect = 7.6
Identities = 24/98 (24%), Positives = 38/98 (38%), Gaps = 7/98 (7%)
Query: 535 EALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDT-NNSKHDTLRMKIE 593
+++ K PS +S+ + +S PS D N + T T + + LR E
Sbjct: 4 KSILKHSRMSSPSLETDSMESGQQQNMVSSTPSIDMNESDCSGTGTPSEERIRRLRWDEE 63
Query: 594 NNFNNHSTNYTRSKMKNLKT------LPDPDVSNKNID 625
N + K+ KT LPD +V N+D
Sbjct: 64 NLSKAEQQKSAKMKITEPKTPFQRFLLPDDEVPEINLD 101
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.311 0.127 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,629,479
Number of Sequences: 5004
Number of extensions: 158850
Number of successful extensions: 501
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 483
Number of HSP's gapped (non-prelim): 47
length of query: 789
length of database: 2,362,478
effective HSP length: 78
effective length of query: 711
effective length of database: 1,972,166
effective search space: 1402210026
effective search space used: 1402210026
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 58 (27.5 bits)
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