Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001939-TA|BGIBMGA001939-PA|undefined
(789 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC063800-1|AAH63800.1| 1000|Homo sapiens SEC23 interacting prote... 37 0.24
AB019435-1|BAA77392.1| 1000|Homo sapiens phospholipase protein. 37 0.24
AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens ... 37 0.32
AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein. 37 0.32
BC065927-1|AAH65927.1| 1028|Homo sapiens kinesin family member 1... 34 1.7
BC036871-1|AAH36871.1| 412|Homo sapiens Similar to kinesin 17 p... 34 1.7
AL663074-7|CAM12853.1| 1028|Homo sapiens kinesin family member 1... 34 2.2
AL391357-4|CAM12849.1| 1028|Homo sapiens kinesin family member 1... 34 2.2
BC104037-1|AAI04038.1| 552|Homo sapiens FLJ44691 protein protein. 33 3.9
U05237-1|AAA97522.1| 810|Homo sapiens FAC1 protein. 32 9.1
AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger ... 32 9.1
>BC063800-1|AAH63800.1| 1000|Homo sapiens SEC23 interacting protein
protein.
Length = 1000
Score = 37.1 bits (82), Expect = 0.24
Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 450 DDSFSVVDANKDAIHLEPIMEELDDLTDMDITNKKRLNSESSLVATIDEIRKSTVTNSPR 509
D+S+ +V NK+ + L+ +E L K++++ ES L+ T+D++++ + PR
Sbjct: 634 DESYDLVVENKEVLTLQETLEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPR 693
Query: 510 -NLYHRGDHLWDSPQPTASNLDPILSEALWKEPSKFHPSNIMESLAEKEND 559
+ + +H + AS + + + + + M SL + N+
Sbjct: 694 KKIANFVEHKAAKLKKAASEKKAVAATSTKGQEQSAQKTKDMASLPSESNE 744
>AB019435-1|BAA77392.1| 1000|Homo sapiens phospholipase protein.
Length = 1000
Score = 37.1 bits (82), Expect = 0.24
Identities = 23/111 (20%), Positives = 52/111 (46%), Gaps = 1/111 (0%)
Query: 450 DDSFSVVDANKDAIHLEPIMEELDDLTDMDITNKKRLNSESSLVATIDEIRKSTVTNSPR 509
D+S+ +V NK+ + L+ +E L K++++ ES L+ T+D++++ + PR
Sbjct: 634 DESYDLVVENKEVLTLQETLEALSLSEYFSTFEKEKIDMESLLMCTVDDLKEMGIPLGPR 693
Query: 510 -NLYHRGDHLWDSPQPTASNLDPILSEALWKEPSKFHPSNIMESLAEKEND 559
+ + +H + AS + + + + + M SL + N+
Sbjct: 694 KKIANFVEHKAAKLKKAASEKKAVAATSTKGQEQSAQKTKDMASLPSESNE 744
>AK096678-1|BAC04838.1| 738|Homo sapiens protein ( Homo sapiens
cDNA FLJ39359 fis, clone PEBLM2004290. ).
Length = 738
Score = 36.7 bits (81), Expect = 0.32
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 294 LKNIKVGNQDADIENIQRIALDILKEMYAKKGKKSNANPDFFTKSRELDTPTEILSVHDY 353
LK I G A+++ +RI +++ A+KG++ + NP++F + ++T I+ H +
Sbjct: 143 LKGINKGQVSANMKIQKRIPRCYVEDTEAEKGRE-HVNPEYFPPASAVETEYNIMKFHSF 201
Query: 354 ENICAVNIARE 364
A NI +
Sbjct: 202 STNMAFNILND 212
>AB002340-1|BAA20800.3| 2467|Homo sapiens KIAA0342 protein protein.
Length = 2467
Score = 36.7 bits (81), Expect = 0.32
Identities = 19/71 (26%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 294 LKNIKVGNQDADIENIQRIALDILKEMYAKKGKKSNANPDFFTKSRELDTPTEILSVHDY 353
LK I G A+++ +RI +++ A+KG++ + NP++F + ++T I+ H +
Sbjct: 472 LKGINKGQVSANMKIQKRIPRCYVEDTEAEKGRE-HVNPEYFPPASAVETEYNIMKFHSF 530
Query: 354 ENICAVNIARE 364
A NI +
Sbjct: 531 STNMAFNILND 541
>BC065927-1|AAH65927.1| 1028|Homo sapiens kinesin family member 17
protein.
Length = 1028
Score = 34.3 bits (75), Expect = 1.7
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 527 SNLDPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTN--NSK 584
SNL+ IL E+ W E + F I + K + +S P RKT + D N +
Sbjct: 875 SNLEKILRESCWDEDNGFW--KIPHPVITKTSLPVVSTGPQNKPARKT-SAADNGEPNME 931
Query: 585 HDTLRMKI-ENNFNNHSTNYTRSK 607
D R+ + +N N ++NY RSK
Sbjct: 932 EDRYRLMLSRSNSENIASNYFRSK 955
>BC036871-1|AAH36871.1| 412|Homo sapiens Similar to kinesin 17
protein.
Length = 412
Score = 34.3 bits (75), Expect = 1.7
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 527 SNLDPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTN--NSK 584
SNL+ IL E+ W E + F I + K + +S P RKT + D N +
Sbjct: 259 SNLEKILRESCWDEDNGFW--KIPHPVITKTSLPVVSTGPQNKPARKT-SAADNGEPNME 315
Query: 585 HDTLRMKI-ENNFNNHSTNYTRSK 607
D R+ + +N N ++NY RSK
Sbjct: 316 EDRYRLMLSRSNSENIASNYFRSK 339
>AL663074-7|CAM12853.1| 1028|Homo sapiens kinesin family member 17
protein.
Length = 1028
Score = 33.9 bits (74), Expect = 2.2
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 527 SNLDPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTN--NSK 584
SNL+ IL E+ W E + F I + K + +S P RKT + D N +
Sbjct: 875 SNLEKILRESCWDEDNGFW--KIPHPVITKTSLPVVSTGPQNKPARKT-SAADNGEPNME 931
Query: 585 HDTLRMKI-ENNFNNHSTNYTRSK 607
D R+ + +N N ++NY RSK
Sbjct: 932 DDRYRLMLSRSNSENIASNYFRSK 955
>AL391357-4|CAM12849.1| 1028|Homo sapiens kinesin family member 17
protein.
Length = 1028
Score = 33.9 bits (74), Expect = 2.2
Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 527 SNLDPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTN--NSK 584
SNL+ IL E+ W E + F I + K + +S P RKT + D N +
Sbjct: 875 SNLEKILRESCWDEDNGFW--KIPHPVITKTSLPVVSTGPQNKPARKT-SAADNGEPNME 931
Query: 585 HDTLRMKI-ENNFNNHSTNYTRSK 607
D R+ + +N N ++NY RSK
Sbjct: 932 DDRYRLMLSRSNSENIASNYFRSK 955
>BC104037-1|AAI04038.1| 552|Homo sapiens FLJ44691 protein protein.
Length = 552
Score = 33.1 bits (72), Expect = 3.9
Identities = 43/162 (26%), Positives = 61/162 (37%), Gaps = 9/162 (5%)
Query: 484 KRLNSESSLVATIDEIRKSTVTNSPRNLYHRGDH-LWDSPQPTASNLDPILSEALWKEPS 542
K L S V T+ + +T P GDH WD QP + + S + + S
Sbjct: 204 KNLAGMSEAVVTVTVLGITTTPIPPDTSERTGDHPEWD-VQPGSGRSTSVSSASSYLWSS 262
Query: 543 KFHP-SNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHST 601
F P S+ S + + S +P + + T+ S T+ K +F H
Sbjct: 263 SFSPTSSFSASTLSPPSTASFSLSPFSSSTVSSTTTLSTSISASTTMANK--RSFQLHQG 320
Query: 602 NYTRSKM-KNLKTLPDPDVSNK-NIDLLWQ--LVSGNATTAN 639
K+ KN LP S K + LL Q L NAT N
Sbjct: 321 GKRNLKVAKNGSKLPPASTSKKEELALLDQTMLTETNATIEN 362
>U05237-1|AAA97522.1| 810|Homo sapiens FAC1 protein.
Length = 810
Score = 31.9 bits (69), Expect = 9.1
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 465 LEPIMEELD---DLTDMDITNKKRLNSESSLVATIDEIRKSTVTNSPRNLYHRGDHLWDS 521
LE + EE+ D+T+ D+TNK R +++S L A +EI +S +GD + +
Sbjct: 381 LEEMREEIHRHMDITE-DLTNKARGSNKSFLAAANEEILESIRAK-------KGD-IDNV 431
Query: 522 PQPTASNLDPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTN 581
P + D +E K+ K +SL + +DK +P + + V D
Sbjct: 432 KSPEETEKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTPDDDPEQGKSEEPTEVGDKG 491
Query: 582 NSKHDTLRMKIENNFNNH-STNYTRSKMKNLKTLPD 616
NS L N + S + RS + L PD
Sbjct: 492 NSVSANLGDNTTNATSEETSPSEGRSPVGCLSETPD 527
>AY282495-1|AAP22284.1| 2764|Homo sapiens bromodomain PHD finger
transcription factor protein.
Length = 2764
Score = 31.9 bits (69), Expect = 9.1
Identities = 41/156 (26%), Positives = 66/156 (42%), Gaps = 13/156 (8%)
Query: 465 LEPIMEELD---DLTDMDITNKKRLNSESSLVATIDEIRKSTVTNSPRNLYHRGDHLWDS 521
LE + EE+ D+T+ D+TNK R +++S L A +EI +S +GD + +
Sbjct: 381 LEEMREEIHRHMDITE-DLTNKARGSNKSFLAAANEEILESIRAK-------KGD-IDNV 431
Query: 522 PQPTASNLDPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTN 581
P + D +E K+ K +SL + +DK +P + + V D
Sbjct: 432 KSPEETEKDKNETENDSKDAEKNREEFEDQSLEKDSDDKTPDDDPEQGKSEEPTEVGDKG 491
Query: 582 NSKHDTLRMKIENNFNNH-STNYTRSKMKNLKTLPD 616
NS L N + S + RS + L PD
Sbjct: 492 NSVSANLGDNTTNATSEETSPSEGRSPVGCLSETPD 527
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.311 0.127 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 103,416,098
Number of Sequences: 224733
Number of extensions: 4102726
Number of successful extensions: 7069
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 7066
Number of HSP's gapped (non-prelim): 12
length of query: 789
length of database: 73,234,838
effective HSP length: 96
effective length of query: 693
effective length of database: 51,660,470
effective search space: 35800705710
effective search space used: 35800705710
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 69 (31.9 bits)
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