Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001939-TA|BGIBMGA001939-PA|undefined
(789 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF026208-2|AAB71269.3| 774|Caenorhabditis elegans Prion-like-(q... 40 0.007
Z82282-9|CAB05281.2| 361|Caenorhabditis elegans Hypothetical pr... 33 0.59
Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical p... 33 1.0
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 32 1.4
Z68314-10|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical p... 31 2.4
Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical p... 31 2.4
AF016440-10|AAB65903.2| 96|Caenorhabditis elegans Hypothetical... 31 2.4
AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator comp... 31 2.4
Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical pr... 31 3.2
Z66514-1|CAA91341.3| 198|Caenorhabditis elegans Hypothetical pr... 31 3.2
AL110500-3|CAB54483.1| 493|Caenorhabditis elegans Hypothetical ... 31 3.2
Z81110-6|CAB03261.1| 3191|Caenorhabditis elegans Hypothetical pr... 31 4.2
Z81094-8|CAB03155.1| 3191|Caenorhabditis elegans Hypothetical pr... 31 4.2
U80953-5|AAO61446.3| 317|Caenorhabditis elegans Dachsund transc... 31 4.2
U80953-4|AAB52555.2| 420|Caenorhabditis elegans Dachsund transc... 31 4.2
U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical p... 31 4.2
U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein... 31 4.2
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 31 4.2
U70852-14|AAM98014.1| 783|Caenorhabditis elegans Gei-4(four) in... 30 5.5
U70852-13|AAM98015.1| 788|Caenorhabditis elegans Gei-4(four) in... 30 5.5
AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical ... 30 5.5
Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical pr... 30 7.3
EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient rec... 30 7.3
AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical... 30 7.3
AC024761-9|AAP13757.1| 279|Caenorhabditis elegans Hypothetical ... 30 7.3
Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical pr... 29 9.6
AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical ... 29 9.6
>AF026208-2|AAB71269.3| 774|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 40
protein.
Length = 774
Score = 39.9 bits (89), Expect = 0.007
Identities = 32/100 (32%), Positives = 44/100 (44%), Gaps = 9/100 (9%)
Query: 523 QPTASNLDPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTNN 582
QP LD ++ E L K SK I E +A+ E +KNI + YD N N+ D N
Sbjct: 280 QPIVPKLDKLV-EVLKK--SKLSKEEIDEIVAQVEGNKNIEKPAKYDFNAAVQNIPDKRN 336
Query: 583 S---KHDTLRMKIENNFNNHSTNYT---RSKMKNLKTLPD 616
+ K I NF N + + ++ LK LPD
Sbjct: 337 NIRQKITDASRIISTNFENQRKEQSIVVQQQVDELKVLPD 376
>Z82282-9|CAB05281.2| 361|Caenorhabditis elegans Hypothetical
protein T07G12.12 protein.
Length = 361
Score = 33.5 bits (73), Expect = 0.59
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 548 NIMESLAE-KENDKNISQNPSYDTN-RKTLNVT-DTNNSKHDTLRMKIENNFNNHSTN 602
N+ E ++E ND+N SYD + LN + ++NNS + M IE+ +NH+TN
Sbjct: 79 NLSEKISEIGPNDENEDLKESYDQEPEEELNSSHESNNSVEKVMDMIIEDVVSNHTTN 136
>Z81077-12|CAH19097.1| 316|Caenorhabditis elegans Hypothetical
protein F36A2.14 protein.
Length = 316
Score = 32.7 bits (71), Expect = 1.0
Identities = 29/119 (24%), Positives = 50/119 (42%), Gaps = 5/119 (4%)
Query: 128 SFGNNGCDASGIEIYSVENTPQTLKQDNQGQNISNKINCKHKKILICSPTELTLKLSAGE 187
S G + CD G++ + L N+ + + + K+ K L+ +E K E
Sbjct: 34 STGGSRCDKDGLD-EETRDVLNKLTHLNKRIRTAFRFDSKNPKNLVTDGSEEKKKKK--E 90
Query: 188 NIESNIDEITSSNLNSNKRRAICSSDDLSDDLTNMNFDVCAIVNEDIMKILKNDQCSEI 246
++ + DE SS NS K D SDD T + V+ K +K+++C +
Sbjct: 91 RMKKSKDESGSSRKNSKKTAE--DMDQSSDDTTKPAEETKKTVSSKKQKKVKSEECDHL 147
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 32.3 bits (70), Expect = 1.4
Identities = 26/112 (23%), Positives = 50/112 (44%), Gaps = 2/112 (1%)
Query: 547 SNIMESLAEKENDKNISQNPSYDTNR--KTLNVTDTNNSKHDTLRMKIENNFNNHSTNYT 604
+ I S A K D I S+ +N K+ + + SK R K N S++ +
Sbjct: 636 AGIASSKASKSADDKIEILASHGSNSILKSAHDQASKASKSSRKRSKKSKKSNETSSSSS 695
Query: 605 RSKMKNLKTLPDPDVSNKNIDLLWQLVSGNATTANGSNDYVSMNRMSTSLQS 656
++ + ++ P P + + D+ G+A+T+ S+ S ++ST +S
Sbjct: 696 DERLIHSQSPPTPQNTTSSSDVSSSSSGGSASTSESSSSAPSAEQVSTPKKS 747
>Z68314-10|CAA92667.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 143 SVENTPQTLKQDNQGQNISNKINCKHKKILICSPTELTLKLSAGENIESNIDEITSSNLN 202
++ N PQTL N K+ + K + EL L + E I+ + D+ + ++
Sbjct: 1943 TLRNMPQTLADTPDPVNSDPKVWSRRAKRKLDFEEELKLPEAGSETIDESDDDEENEEVS 2002
Query: 203 SNKRRAICSSDDLSDDL 219
+ + S+D+ D++
Sbjct: 2003 KEENNELIDSEDVMDEV 2019
>Z66497-12|CAA91289.2| 2862|Caenorhabditis elegans Hypothetical
protein K08F8.6 protein.
Length = 2862
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 143 SVENTPQTLKQDNQGQNISNKINCKHKKILICSPTELTLKLSAGENIESNIDEITSSNLN 202
++ N PQTL N K+ + K + EL L + E I+ + D+ + ++
Sbjct: 1943 TLRNMPQTLADTPDPVNSDPKVWSRRAKRKLDFEEELKLPEAGSETIDESDDDEENEEVS 2002
Query: 203 SNKRRAICSSDDLSDDL 219
+ + S+D+ D++
Sbjct: 2003 KEENNELIDSEDVMDEV 2019
>AF016440-10|AAB65903.2| 96|Caenorhabditis elegans Hypothetical
protein F29G9.1 protein.
Length = 96
Score = 31.5 bits (68), Expect = 2.4
Identities = 13/31 (41%), Positives = 20/31 (64%)
Query: 72 PIRSFKHSLHRNQNGASYSIESTLEQHPKKD 102
PI+S++H LH +Q A S +T+ Q KK+
Sbjct: 49 PIQSYRHHLHNHQATARISKRTTVRQQKKKE 79
>AB223006-1|BAE16563.1| 2862|Caenorhabditis elegans Mediator complex
subunit Med13 protein.
Length = 2862
Score = 31.5 bits (68), Expect = 2.4
Identities = 17/77 (22%), Positives = 35/77 (45%)
Query: 143 SVENTPQTLKQDNQGQNISNKINCKHKKILICSPTELTLKLSAGENIESNIDEITSSNLN 202
++ N PQTL N K+ + K + EL L + E I+ + D+ + ++
Sbjct: 1943 TLRNMPQTLADTPDPVNSDPKVWSRRAKRKLDFEEELKLPEAGSETIDESDDDEENEEVS 2002
Query: 203 SNKRRAICSSDDLSDDL 219
+ + S+D+ D++
Sbjct: 2003 KEENNELIDSEDVMDEV 2019
>Z68335-3|CAA92730.2| 540|Caenorhabditis elegans Hypothetical
protein C29F4.2 protein.
Length = 540
Score = 31.1 bits (67), Expect = 3.2
Identities = 15/62 (24%), Positives = 31/62 (50%)
Query: 539 KEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNN 598
++P +P I+E E ++ +++ P + RK +N+++ S R + N+F
Sbjct: 468 QKPCYSNPDCIVEVDEESQDIPKVTEEPKQEPPRKRVNISNKRESVISMGRSRSFNHFGE 527
Query: 599 HS 600
HS
Sbjct: 528 HS 529
>Z66514-1|CAA91341.3| 198|Caenorhabditis elegans Hypothetical
protein K01A11.1 protein.
Length = 198
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/57 (33%), Positives = 30/57 (52%), Gaps = 4/57 (7%)
Query: 464 HLEP-IMEELDDLTDMDITNKKRLNSESSLVATIDEIRK--STVTNSPRNLYHRGDH 517
H +P +M E D+L +M + +K + +S L + I + ST+T P YHR H
Sbjct: 32 HQKPSVMNETDELYEMSMVTQKS-DDDSDLASRIRSEKSIPSTLTTPPTVTYHRRHH 87
>AL110500-3|CAB54483.1| 493|Caenorhabditis elegans Hypothetical
protein Y87G2A.3 protein.
Length = 493
Score = 31.1 bits (67), Expect = 3.2
Identities = 19/65 (29%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 418 PPFPKKTHTYSNVFVKFDKGSQDDYANSTICTDDSFSVVDANKDAIHLEPIMEELDDLTD 477
P + K Y+ V +K + DD + + DD F V+D +H E E+ D+ D
Sbjct: 435 PKYLPKFEPYTGVSMKIEMKEFDDIGAANVKIDDDFEVLD-----VHTEE--EDADEDND 487
Query: 478 MDITN 482
D+ N
Sbjct: 488 DDVAN 492
>Z81110-6|CAB03261.1| 3191|Caenorhabditis elegans Hypothetical
protein T01D3.1 protein.
Length = 3191
Score = 30.7 bits (66), Expect = 4.2
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 552 SLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKI-ENNFNNHSTNYTRSKMKN 610
S A + +KN + + D TL +T NN K M+I +NNF N+ YT + N
Sbjct: 900 SCANLQMEKNRYDSNNIDGIGSTLVITSENNEKKKNGVMEIVKNNFTNNGGIYTVTVDTN 959
Query: 611 L 611
L
Sbjct: 960 L 960
>Z81094-8|CAB03155.1| 3191|Caenorhabditis elegans Hypothetical
protein T01D3.1 protein.
Length = 3191
Score = 30.7 bits (66), Expect = 4.2
Identities = 21/61 (34%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 552 SLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKI-ENNFNNHSTNYTRSKMKN 610
S A + +KN + + D TL +T NN K M+I +NNF N+ YT + N
Sbjct: 900 SCANLQMEKNRYDSNNIDGIGSTLVITSENNEKKKNGVMEIVKNNFTNNGGIYTVTVDTN 959
Query: 611 L 611
L
Sbjct: 960 L 960
>U80953-5|AAO61446.3| 317|Caenorhabditis elegans Dachsund
transcription factor homologprotein 1, isoform b
protein.
Length = 317
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 546 PSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTR 605
P N+ +S END + +N + + +V+D S ++L M +E ++ S
Sbjct: 159 PLNLSKSGGNSENDSDSLENMRKEDSSPNTSVSDRGGSNSNSLSMSMEAGSSSSSGKNDE 218
Query: 606 SKMKN 610
+ M N
Sbjct: 219 ASMMN 223
>U80953-4|AAB52555.2| 420|Caenorhabditis elegans Dachsund
transcription factor homologprotein 1, isoform a
protein.
Length = 420
Score = 30.7 bits (66), Expect = 4.2
Identities = 16/65 (24%), Positives = 30/65 (46%)
Query: 546 PSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTNNSKHDTLRMKIENNFNNHSTNYTR 605
P N+ +S END + +N + + +V+D S ++L M +E ++ S
Sbjct: 262 PLNLSKSGGNSENDSDSLENMRKEDSSPNTSVSDRGGSNSNSLSMSMEAGSSSSSGKNDE 321
Query: 606 SKMKN 610
+ M N
Sbjct: 322 ASMMN 326
>U80441-11|AAB37660.3| 1037|Caenorhabditis elegans Hypothetical
protein F27C1.11 protein.
Length = 1037
Score = 30.7 bits (66), Expect = 4.2
Identities = 27/112 (24%), Positives = 44/112 (39%), Gaps = 2/112 (1%)
Query: 499 IRKSTVTNSPRNLYHRGDHLWDSPQPTASNLDPILSEALWKEPSKFHPSNIMESLAEKEN 558
+ ST T SP L + PT + S+ + K+P K + ES K++
Sbjct: 204 VSNSTTTTSPYVPKSYASKLKQTVPPTTKLNNKTTSKEVNKKPKKDTAMSSAESNKTKDS 263
Query: 559 DKNISQNPSYDTNRKTLNVTDTNNSKHDTLR--MKIENNFNNHSTNYTRSKM 608
K S N S + R + LR +K +N+ N+ S Y+ +
Sbjct: 264 GKGTSLNNSQQSERHEKMTEKKAQMIREELRTNLKQQNHQNSSSDQYSEEDL 315
>U13646-6|AAC24421.2| 1376|Caenorhabditis elegans Flectin protein 1
protein.
Length = 1376
Score = 30.7 bits (66), Expect = 4.2
Identities = 19/51 (37%), Positives = 25/51 (49%)
Query: 111 LLDQWIAKIGVPTLSSGSFGNNGCDASGIEIYSVENTPQTLKQDNQGQNIS 161
LL Q +AKI T SS S NG AS + S T + + Q QN++
Sbjct: 24 LLQQQLAKIQKATASSPSKSTNGTSASTSAVPSTSGTSSSQNEAAQLQNLA 74
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 30.7 bits (66), Expect = 4.2
Identities = 20/78 (25%), Positives = 32/78 (41%)
Query: 521 SPQPTASNLDPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDT 580
+P S LD AL + + F +N D N+ Q+ YDT+ T N++
Sbjct: 73 TPADNTSLLDLSTVTALATDDASFVGTNDASITPGSNVDVNLEQSELYDTSNCTSNLSMV 132
Query: 581 NNSKHDTLRMKIENNFNN 598
S + N+F+N
Sbjct: 133 QESDETDADATLSNDFDN 150
>U70852-14|AAM98014.1| 783|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 4, isoform a protein.
Length = 783
Score = 30.3 bits (65), Expect = 5.5
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 49 ELNNKAVIQNPGTEENKTVVNLNPIRSFKHSLHRNQNGASYSIESTLEQHPKKDIENANK 108
E N+ P + N+ + LN I++FKH LH++ ++ + L+ +++N N
Sbjct: 119 EARNEQKHNEPLIDSNRKPIKLN-IQAFKHGLHKSARQSNADEKLLLDNEHWMNLDNINS 177
Query: 109 N 109
+
Sbjct: 178 D 178
>U70852-13|AAM98015.1| 788|Caenorhabditis elegans Gei-4(four)
interacting proteinprotein 4, isoform b protein.
Length = 788
Score = 30.3 bits (65), Expect = 5.5
Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 1/61 (1%)
Query: 49 ELNNKAVIQNPGTEENKTVVNLNPIRSFKHSLHRNQNGASYSIESTLEQHPKKDIENANK 108
E N+ P + N+ + LN I++FKH LH++ ++ + L+ +++N N
Sbjct: 124 EARNEQKHNEPLIDSNRKPIKLN-IQAFKHGLHKSARQSNADEKLLLDNEHWMNLDNINS 182
Query: 109 N 109
+
Sbjct: 183 D 183
>AF036692-6|AAB88328.1| 397|Caenorhabditis elegans Hypothetical
protein C44B12.5 protein.
Length = 397
Score = 30.3 bits (65), Expect = 5.5
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 3/51 (5%)
Query: 533 LSEALWKEPSKFHPSNIMESLAEKENDKNISQNPSYDTNRKTLNVTDTNNS 583
LSEA W EP K+H + A + + +QNPSY+ N T NN+
Sbjct: 260 LSEANW-EPKKYHKNVKCVCCAPRSSPA--AQNPSYNNNAAQSPPTGYNNN 307
>Z72504-1|CAA96603.2| 1193|Caenorhabditis elegans Hypothetical
protein C29E6.2 protein.
Length = 1193
Score = 29.9 bits (64), Expect = 7.3
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 282 NENIVQKLCLSALKNIKVGNQDADIENIQRIALDILKEMYAKKGKKSNANPDFFTKSREL 341
N N +Q+ L A + V QD D A K NA P+ TK+RE
Sbjct: 44 NVNALQEALLKA--PLAVNAQDGDFMTPLHYAARYGNYDAVKLLLSKNALPN--TKNREG 99
Query: 342 DTPTEILS--VHDYENICAV 359
DTP I S ++ Y +IC++
Sbjct: 100 DTPLHIASKYIYGYSDICSI 119
>EF535106-1|ABQ15208.1| 1206|Caenorhabditis elegans transient
receptor potential subfamilyA-1 protein.
Length = 1206
Score = 29.9 bits (64), Expect = 7.3
Identities = 26/80 (32%), Positives = 36/80 (45%), Gaps = 6/80 (7%)
Query: 282 NENIVQKLCLSALKNIKVGNQDADIENIQRIALDILKEMYAKKGKKSNANPDFFTKSREL 341
N N +Q+ L A + V QD D A K NA P+ TK+RE
Sbjct: 62 NVNALQEALLKA--PLAVNAQDGDFMTPLHYAARYGNYDAVKLLLSKNALPN--TKNREG 117
Query: 342 DTPTEILS--VHDYENICAV 359
DTP I S ++ Y +IC++
Sbjct: 118 DTPLHIASKYIYGYSDICSI 137
>AL032630-13|CAA21568.1| 348|Caenorhabditis elegans Hypothetical
protein Y62H9A.13 protein.
Length = 348
Score = 29.9 bits (64), Expect = 7.3
Identities = 29/122 (23%), Positives = 49/122 (40%), Gaps = 11/122 (9%)
Query: 81 HRNQNGASYSIESTLEQHPKKDIENANKNFLLDQWIAKIGVPTLSSGS------FGNNGC 134
+++QN S S E ++ D+ N N + + P ++ S N
Sbjct: 84 YKHQNNESPSDEDDVDVELSNDVSNENPIVYYQKVASSTTNPVYNNSSEEKTHSAENQDN 143
Query: 135 DASGIEIYSVENTPQTLKQDNQGQNISNKINCKHKKILICSPTELTLKLSAGENIESNID 194
G++ EN P + +NQ Q+ + + K + I S +E S G + SN D
Sbjct: 144 IEYGVKTEPPENQPMPTESNNQTQSDDGETTGEQKDVKIESLSE-----SCGNVLSSNYD 198
Query: 195 EI 196
EI
Sbjct: 199 EI 200
>AC024761-9|AAP13757.1| 279|Caenorhabditis elegans Hypothetical
protein Y38C1AA.12 protein.
Length = 279
Score = 29.9 bits (64), Expect = 7.3
Identities = 20/49 (40%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 466 EPIMEELDDLTDMDITNKKRLNSESSLVATIDEIRKSTVTNSPRNLYHR 514
E + E +DDLT + +KK+L S + I RK T TNS N +HR
Sbjct: 53 EDLSESIDDLT-VTSKDKKKLRP-SKVAEDIGRKRKDT-TNSITNFFHR 98
>Z46812-2|CAA86844.1| 1027|Caenorhabditis elegans Hypothetical
protein ZK675.2 protein.
Length = 1027
Score = 29.5 bits (63), Expect = 9.6
Identities = 32/141 (22%), Positives = 66/141 (46%), Gaps = 9/141 (6%)
Query: 449 TDDSFSVVDANKDAIHLEPIMEELDDLT-DMDITN-KKRLNSESSLVATIDEIRKSTVTN 506
TD+ +++ N+D + EP++ + +T D+++ + +++N + I EI KST+ N
Sbjct: 830 TDEQLNIIPRNEDELDKEPVI--IPAVTEDLEVQSIPRQINFRVANDIDIPEIVKSTLLN 887
Query: 507 SPRNLYHRGDHLWDSPQPTASNLDPILSEALWKEPSKFHPSNIMESLAEKENDKNISQNP 566
+ + L D N L + EP+K +N+ E L+ N +S
Sbjct: 888 GRSDNNLELEDLED--DGLVENRLAELECIIQNEPTKESVTNLQEMLSTLLNYGKLS--- 942
Query: 567 SYDTNRKTLNVTDTNNSKHDT 587
+++T + ++S+ DT
Sbjct: 943 AFETVFRKFEEISMDSSRCDT 963
>AL132859-4|CAB60492.1| 365|Caenorhabditis elegans Hypothetical
protein Y39C12A.8 protein.
Length = 365
Score = 29.5 bits (63), Expect = 9.6
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 13/111 (11%)
Query: 524 PTASNLDPILSEA--LWKEPSKFHPSNIMESLAEKEN-------DKNISQNPSYDTNRKT 574
P+A+ +++ A L +P+K ++ + EN +KN + +T R+
Sbjct: 62 PSATEASKVVNNAFSLLMDPAKRRQYDLQNAETSNENLYKRCNRNKNQRKQEYSNTQRQN 121
Query: 575 LNVTDTNNSKHDTLR--MKIENNFNNHSTNYTRSKMKNLKTLPDPDVSNKN 623
++ +N K + K ++N NH +N+ K KN K+ P + +N N
Sbjct: 122 HKKSEPSNGKRNEQNSSFKQDHNSKNHQSNH--QKTKNKKSNPYSNQNNFN 170
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.311 0.127 0.365
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,151,273
Number of Sequences: 27539
Number of extensions: 825297
Number of successful extensions: 2137
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 2119
Number of HSP's gapped (non-prelim): 32
length of query: 789
length of database: 12,573,161
effective HSP length: 87
effective length of query: 702
effective length of database: 10,177,268
effective search space: 7144442136
effective search space used: 7144442136
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.8 bits)
S2: 63 (29.5 bits)
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