Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001938-TA|BGIBMGA001938-PA|undefined
(267 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.) 111 4e-25
SB_23673| Best HMM Match : DUF855 (HMM E-Value=0.52) 79 4e-15
SB_57677| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37) 30 2.3
SB_26957| Best HMM Match : PDZ (HMM E-Value=0) 29 4.0
SB_47122| Best HMM Match : H2TH (HMM E-Value=0.65) 29 5.2
SB_12996| Best HMM Match : PHZA_PHZB (HMM E-Value=8.6) 29 5.2
SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08) 28 6.9
SB_48295| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.9
SB_48928| Best HMM Match : Glyco_hydro_19 (HMM E-Value=8.5) 28 9.2
>SB_52816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1622
Score = 111 bits (268), Expect = 4e-25
Identities = 68/240 (28%), Positives = 122/240 (50%), Gaps = 12/240 (5%)
Query: 3 TEEVQNNYFNSYED-LEIIHSKVEDVILPNNIKVDVIVSEWMGFYLLHEGMLDSVLIARD 61
TEE+ N+ +D + +I K+E+V LP KVD+IVSEWMG +L+ E ML+SVL ARD
Sbjct: 190 TEEIIKQ--NNLDDKITVIQGKIEEVELPE--KVDIIVSEWMGTFLVFEFMLESVLTARD 245
Query: 62 KFLKEGGEMFPETAVIYVAPCSIPSLYNK----WNNVHGVSMSAFAKHLRKNKSTKPEIL 117
+LK G ++P A +++ PC + Y++ W + +G S ++ ++P
Sbjct: 246 IWLKPNGLVWPSEAKLFLVPCCTKTAYDEVIHIWRDQYGFDYSPAISKAKQEFLSRPIYN 305
Query: 118 NI-EQKDLLGDEVALCWINLREDSASDLNEFSIQHVVGAKKSGSYEGLCLWFECNFPSM- 175
++ +D + + ++ + + DL + ++ G C WF+ F ++
Sbjct: 306 HVFNYEDCISTPQPIIKLDTLKTARHDLEHSAHGFEFVIEQDSMLYGFCSWFDVLFGNIP 365
Query: 176 -SETKDENRIILDTSPNSLATHWKQTAIVLPQEVEVEEGEPIAFQLSMKRDTEHNRRYNL 234
E K + ++L T P THWKQ +L + V+E + I + +KR+ + R ++
Sbjct: 366 HGEDKRNSAVVLSTGPQCDLTHWKQDLFLLDMPLPVQENDLIKGSICLKRNPDFRRHLSV 425
>SB_23673| Best HMM Match : DUF855 (HMM E-Value=0.52)
Length = 380
Score = 79.0 bits (186), Expect = 4e-15
Identities = 42/90 (46%), Positives = 60/90 (66%), Gaps = 5/90 (5%)
Query: 6 VQNNYFNSYEDLEIIHSKVEDVILPNNIKVDVIVSEWMGFYLLHEGMLDSVLIARDKFLK 65
+++N F+S + +I KVEDV LP KVD+I+SEWMG+ L +E MLD+VL ARDK+LK
Sbjct: 294 IKDNNFDSV--ITLIKGKVEDVELPVE-KVDIIISEWMGYCLFYESMLDTVLYARDKWLK 350
Query: 66 EGGEMFPETAVIYVAPCSIPSLYNKWNNVH 95
G +FP+ A +YV C+I K ++
Sbjct: 351 PDGMLFPDKAKLYV--CAIEDRQYKEEKIY 378
>SB_57677| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 359
Score = 30.3 bits (65), Expect = 1.7
Identities = 19/58 (32%), Positives = 30/58 (51%), Gaps = 7/58 (12%)
Query: 182 NRIILDTSPNSLAT----HWKQTAIVLPQEVEV---EEGEPIAFQLSMKRDTEHNRRY 232
NRII D + AT K+ + V+P +E+ E G+ ++ ++EHNRRY
Sbjct: 204 NRIISDVTMRGSATVGKARGKKLSPVIPLTIEIPKAESGDQLSVLSQSDSESEHNRRY 261
>SB_45985| Best HMM Match : IQ (HMM E-Value=1.7e-37)
Length = 942
Score = 29.9 bits (64), Expect = 2.3
Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Query: 106 LRKNKST-KPEILNIEQKDLLGDEVALCWINLREDSASDLNEFSIQHVVGAKKSG 159
L KN+ T P+++++ + + E CW +L E+ Q VVG + SG
Sbjct: 150 LEKNRDTLSPDVVHVLRTSDVSVEQHSCWWHLSEEFMKQAKREQCQVVVGVEHSG 204
>SB_26957| Best HMM Match : PDZ (HMM E-Value=0)
Length = 1685
Score = 29.1 bits (62), Expect = 4.0
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 217 AFQLSMKRDTEHNRRYNLQMTLLDPEAVDHPQPCSCHMT 255
A QLS R ++ ++RY + + + HP SCH T
Sbjct: 514 ATQLSTNRHSKTSKRYVIPLNSQPTDTQRHPSGMSCHST 552
>SB_47122| Best HMM Match : H2TH (HMM E-Value=0.65)
Length = 227
Score = 28.7 bits (61), Expect = 5.2
Identities = 10/32 (31%), Positives = 23/32 (71%)
Query: 2 ETEEVQNNYFNSYEDLEIIHSKVEDVILPNNI 33
ET ++ + F S +DL+ + +K ++V+LP+++
Sbjct: 194 ETLDMDGDAFLSDQDLKAVEAKADEVVLPSSV 225
>SB_12996| Best HMM Match : PHZA_PHZB (HMM E-Value=8.6)
Length = 455
Score = 28.7 bits (61), Expect = 5.2
Identities = 18/63 (28%), Positives = 29/63 (46%), Gaps = 3/63 (4%)
Query: 63 FLKEGGEMFPETAVIYVAPC---SIPSLYNKWNNVHGVSMSAFAKHLRKNKSTKPEILNI 119
F++EGG++F V YVA S + G + F K L + TK ++ +
Sbjct: 179 FVREGGDVFVNCVVSYVADFLRNRGTSRFLGLTKTRGKILERFDKKLARTGCTKEDLFEM 238
Query: 120 EQK 122
E+K
Sbjct: 239 ERK 241
>SB_26383| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1142
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 144 LNEFSIQHVVGAKKSGSYEGLCLWFECNFPSM--SETKDENRIILDTSPNS 192
+N S +++G K SG E +F+ FP M + K+ + II D PNS
Sbjct: 172 INLSSHPNIIGVKDSGGDEIKMSFFKQIFPFMKVKKKKEFSYIIKDVDPNS 222
>SB_57699| Best HMM Match : efhand (HMM E-Value=1e-08)
Length = 676
Score = 28.3 bits (60), Expect = 6.9
Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 71 FPETAVIYVAPC-----SIPSLYNKWNNVHGVSMSAFAKHLRKNKS 111
F E A IY+ P + L WN++ G AFAK LR N S
Sbjct: 399 FEEQAGIYLGPAIDANDGLEYLNLSWNHLRGPGAIAFAKGLRANCS 444
>SB_48295| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1269
Score = 28.3 bits (60), Expect = 6.9
Identities = 19/60 (31%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 63 FLKEGGEMFPETAVIYVAPCSIPSLYNKWNNVHGVSMSAFAKHLRKNKSTKPEILNIEQK 122
F++EGG +F V YVA S K G + F K L TK ++ +E K
Sbjct: 246 FVREGGNVFANCVVSYVADFSRSLGLTK---TRGKILELFDKKLATTGCTKEDLFEMEGK 302
>SB_48928| Best HMM Match : Glyco_hydro_19 (HMM E-Value=8.5)
Length = 423
Score = 27.9 bits (59), Expect = 9.2
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 37 VIVSEWMGFYLLHEGMLDSVLIARDKFLKEGG 68
++ SEW G+ L+ E +LD + D L G
Sbjct: 50 IVGSEWEGYVLVRESILDGTFVILDTKLAGNG 81
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.317 0.133 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,236,157
Number of Sequences: 59808
Number of extensions: 382877
Number of successful extensions: 886
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 876
Number of HSP's gapped (non-prelim): 14
length of query: 267
length of database: 16,821,457
effective HSP length: 81
effective length of query: 186
effective length of database: 11,977,009
effective search space: 2227723674
effective search space used: 2227723674
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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