Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001938-TA|BGIBMGA001938-PA|undefined
(267 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1585 + 34616343-34616531,34616677-34616742,34616842-346169... 128 5e-30
07_03_1445 + 26580293-26580610,26580814-26581314,26581411-265815... 106 2e-23
06_01_0312 + 2246899-2247105,2247182-2247374,2247607-2247712,224... 106 2e-23
10_08_0451 + 18033065-18033253,18033746-18033805,18034256-180343... 100 1e-21
07_03_1645 + 28348897-28349100,28349263-28349334,28350113-283502... 87 1e-17
06_01_0038 + 375893-376093,376758-376883,376978-377177,377411-37... 36 0.045
02_01_0312 - 2082614-2082677,2082815-2082945,2083041-2083129,208... 30 2.2
08_01_0985 - 9960064-9960249,9960327-9960419,9960518-9960578,996... 29 2.9
06_01_0598 + 4324129-4326150 29 2.9
04_04_1080 - 30674122-30674204,30674842-30674913,30675261-306753... 29 3.9
05_06_0191 - 26265460-26267016,26267858-26268356,26268789-262688... 28 9.0
03_05_0829 + 28025760-28025846,28026366-28026473,28026721-280267... 28 9.0
02_05_0046 - 25398412-25398594,25399022-25399060,25399896-254003... 28 9.0
02_01_0224 - 1461924-1462227,1462602-1462798,1463059-1463213,146... 28 9.0
01_07_0246 + 42253379-42253642,42253846-42254084,42254267-422544... 28 9.0
01_01_0018 + 139150-140415 28 9.0
>04_04_1585 +
34616343-34616531,34616677-34616742,34616842-34616910,
34617408-34617443,34617877-34617942,34618216-34618284,
34618394-34618471,34618674-34618752,34618866-34618960,
34619056-34619140,34619390-34619571,34619681-34619799,
34620529-34620550
Length = 384
Score = 128 bits (309), Expect = 5e-30
Identities = 80/250 (32%), Positives = 130/250 (52%), Gaps = 27/250 (10%)
Query: 12 NSYED-LEIIHSKVEDVILPNNIKVDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEM 70
N+ +D + ++H +VEDV + + KVDVI+SEWMG+ LL+E ML SVL ARDK+LK GG +
Sbjct: 128 NNLDDKVVVVHGRVEDVEVED--KVDVIISEWMGYMLLYESMLPSVLFARDKWLKPGGLI 185
Query: 71 FPETAVIYVAPCSIPSLY----NKWNNVHGVSMSAFAKHLRKNKSTKPEILNIEQKDLLG 126
P A +++AP + Y + W++V+G++MSA +K S +P I I +++L
Sbjct: 186 LPSHATLFMAPITNSERYEGSVDFWSDVYGINMSALVPLAKKFTSEEPSIEIIGGENVLS 245
Query: 127 DEVALCWINLREDSASDLNEFSIQHVVGAKKSGSYEGLCLWFECNFPSMSETKD------ 180
+ I+ A +L F+ ++ V + G LWFE F S D
Sbjct: 246 WPFVVKHIDCYTFKAEELKSFTTKYKVSSMMLAPIHGFGLWFEVEFNGPSNPTDKSPSDL 305
Query: 181 --------------ENRIILDTSPNSLATHWKQTAIVLPQEVEVEEGEPIAFQLSMKRDT 226
E+ ++L T+P THW QT + P +EV++ + I + + +
Sbjct: 306 NPLDVIRKKRRRGSEDPVVLSTAPEDEPTHWHQTILYFPDPIEVKQDQIIEGSVKVSQSE 365
Query: 227 EHNRRYNLQM 236
E+ R N+Q+
Sbjct: 366 ENPRFLNIQL 375
>07_03_1445 +
26580293-26580610,26580814-26581314,26581411-26581508,
26581900-26581978,26582065-26582325,26582409-26582576,
26582800-26583237
Length = 620
Score = 106 bits (255), Expect = 2e-23
Identities = 69/209 (33%), Positives = 108/209 (51%), Gaps = 14/209 (6%)
Query: 17 LEIIHSKVED----VILPNNIKVDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEMFP 72
+ ++H+K E+ + +P+N K DV+VSEWMG+ LL+E ML SVL ARD FLK GG + P
Sbjct: 356 ITVVHTKAEELNHKIQVPSN-KFDVLVSEWMGYCLLYESMLSSVLYARDHFLKPGGAILP 414
Query: 73 ETAVIYVAPCSI-PSLYNKWNNVHGVSMSAFAKHLRKNKSTKPEILNIEQKDLLGDEVAL 131
+TA I+ A + W NV+G MS K + N + P + + +D++ + L
Sbjct: 415 DTATIFGAGFGKGGTSLPFWENVYGFDMSCIGKEVTGNSARFPVVDILASEDIVTETAVL 474
Query: 132 CWINL---REDSASDLNEFSIQ-HVVGAKKSGS--YEGLCLWFECNFPSMSETKDENRII 185
+L +E+ + F ++ G +SG G+ LWF+ F + E +
Sbjct: 475 NSFDLATMKENEMDFTSSFELRLSESGVSQSGVTWCYGIILWFDTGF--TNRFCKEKPVN 532
Query: 186 LDTSPNSLATHWKQTAIVLPQEVEVEEGE 214
L TSP S THW QT + + + + E
Sbjct: 533 LSTSPFSTPTHWSQTIFTFEEPIAMAKEE 561
>06_01_0312 +
2246899-2247105,2247182-2247374,2247607-2247712,
2247958-2248147,2248472-2248657,2248739-2248822,
2249207-2249383
Length = 380
Score = 106 bits (254), Expect = 2e-23
Identities = 72/244 (29%), Positives = 118/244 (48%), Gaps = 25/244 (10%)
Query: 17 LEIIHSKVEDVILPNNIKVDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEMFPETAV 76
+E+I +EDV+LP KVDVI+SEWMG++LL E M DSV+ ARD++LK G M+P A
Sbjct: 118 VEVIQGSMEDVVLPE--KVDVIISEWMGYFLLRESMFDSVICARDRWLKPDGVMYPSHAR 175
Query: 77 IYVAPCSIPSLYNK----------WN-------NVHGVSMSAFAKHLRKNKS---TKPEI 116
+++AP NK WN + +GV+M+ K R K I
Sbjct: 176 MWLAPIRSDLAENKMEDLEIAMHDWNLFVEDTESYYGVNMNVLTKAYRAEHEKYYLKSAI 235
Query: 117 L-NIEQKDLLGDEVALCWINLREDSASDLNEFSIQHVVGAKKSGS-YEGLCLWFECNFPS 174
N+ ++G + I+ + ++ E Q + K + L WF+ +F
Sbjct: 236 WNNLHPNQVIGQAAVIKEIDCLTATVDEIREVRAQVTMPIKLDMTRLAALAGWFDVHFRG 295
Query: 175 MSETKDENRIILDTSPN-SLATHWKQTAIVLPQEVEVEEGEPIAFQLSMKRDTEHNRRYN 233
+ + L T+P+ + THW Q +L ++V EG+ + +M R E++R +
Sbjct: 296 SKQNPATQEVELSTAPDVNGGTHWGQQVFLLTPPLKVNEGDNVKVSFTMVRSKENHRLMD 355
Query: 234 LQMT 237
++ T
Sbjct: 356 MEFT 359
>10_08_0451 +
18033065-18033253,18033746-18033805,18034256-18034324,
18034751-18034786,18035081-18035146,18035345-18035443,
18035543-18035620,18035724-18035802,18035999-18036093,
18036251-18036335,18036505-18036698,18036804-18036922,
18037015-18037057
Length = 403
Score = 100 bits (239), Expect = 1e-21
Identities = 63/229 (27%), Positives = 108/229 (47%), Gaps = 28/229 (12%)
Query: 34 KVDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEMFPETAVIYVAPCSIPSLYNK--- 90
KVDVI+SEWMG+ LL+E ML SV+ ARDK+LK GG + P A +Y+AP + Y
Sbjct: 157 KVDVIISEWMGYMLLYESMLGSVIFARDKWLKPGGLILPSHASLYLAPITNSHRYQDSVY 216
Query: 91 -WNNVHGVSMSAFAKHLRKNKSTKPEILNIEQKDLLGDEVALCWINLREDSASDLNEFSI 149
W +V+G+ MS+ ++ +P + I +++L + ++ A +L +
Sbjct: 217 FWQDVYGIKMSSMMPLAKQCAFMEPSVETISGENVLTWPSVVAQVDCYTIQAPELETITA 276
Query: 150 QHVVGAKKSGSYEGLCLWFECNF------------------------PSMSETKDENRII 185
+ G WF+ F PS + K + I+
Sbjct: 277 TFNYTSMLQAPLHGFAFWFDVEFNGPVRQRSKKQANQCLDGNTQDASPSNKKKKADAPIV 336
Query: 186 LDTSPNSLATHWKQTAIVLPQEVEVEEGEPIAFQLSMKRDTEHNRRYNL 234
L T+P THW+QT + L + +E+++ + I +++ + +H R N+
Sbjct: 337 LSTAPEDAPTHWQQTLLYLFEPIELKKDQNIEGSVTISQSQQHARFLNI 385
>07_03_1645 +
28348897-28349100,28349263-28349334,28350113-28350266,
28350973-28351116,28351213-28351316,28351401-28351499,
28351582-28351651,28352127-28352223,28352443-28352497,
28353507-28353590,28353851-28353928,28354027-28354130,
28354212-28354635,28355311-28355346
Length = 574
Score = 87.0 bits (206), Expect = 1e-17
Identities = 70/231 (30%), Positives = 110/231 (47%), Gaps = 19/231 (8%)
Query: 17 LEIIHSKVEDVILPNNIKVDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEMFPETAV 76
+ +I KVE+V LP K D+++SE MG L++E ML+S +IARD+FL GG+MFP T
Sbjct: 258 ITVIKGKVEEVELPE--KADILISEPMGTLLVNERMLESYVIARDRFLVPGGKMFPTTGR 315
Query: 77 IYVAPCSIPSLY----NK---W--NNVHGVSMSAFAKHLRKNKSTKPEILNIEQKDLLGD 127
I++AP S LY NK W +N GV ++ + ++P +++ LL
Sbjct: 316 IHMAPFSDEYLYVEMANKALFWQQHNFFGVDLTPLHGSAFQGYFSQP-VVDAFDPRLLVS 374
Query: 128 EVALCWINLREDSASDLNEFSIQHVVGAKKSGSYEGLCLWFECNFPSMSETKDENRIILD 187
++ +L E I A GL WF+ F + + L
Sbjct: 375 PPTFHTLDFTTMKEEELYEIDIPLNFVASVGTRVHGLACWFDVLFNGSTVQR-----WLT 429
Query: 188 TSPNSLATHWKQTAIVLPQEVEVEEGEPIAFQLSMKRDTEHNRRYNLQMTL 238
T+P S THW Q +L Q + V G+ I +L + + + Y + +T+
Sbjct: 430 TAPGSPTTHWYQLRCILSQPLYVMAGQEITGRLHLVAHSAQS--YTIYLTM 478
>06_01_0038 +
375893-376093,376758-376883,376978-377177,377411-377502,
377966-378222,378610-378846,378986-379063,380422-380571,
380646-380720,381109-381205,381289-381341
Length = 521
Score = 35.5 bits (78), Expect = 0.045
Identities = 29/124 (23%), Positives = 60/124 (48%), Gaps = 8/124 (6%)
Query: 17 LEIIHSKVEDVILPNNIK--VDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEMFPET 74
+++ H + +++ + +++ D++VSE + LL EG++ ++ A D L + ++ P
Sbjct: 44 VKVFHKRSDELKVRDDLDSPADILVSEILDSELLGEGLIPTLQQAYDMLLAKNPKIVPYR 103
Query: 75 AVIY---VAPCSIPSLYNKWNNVHGVSMSAFAK--HLRKNKSTKPEILNIEQKDLLGDEV 129
A Y V + L++ NN + + + + S KP+ + Q D L DE+
Sbjct: 104 ATTYGQLVESTFLWKLHDLHNNEANAADGVWLTPGEMERIVSVKPQ-QHAMQCDALEDEI 162
Query: 130 ALCW 133
L W
Sbjct: 163 RLVW 166
>02_01_0312 -
2082614-2082677,2082815-2082945,2083041-2083129,
2083223-2083292,2083429-2083509,2083768-2083821,
2084864-2085067,2086272-2086366,2086976-2086997,
2087492-2087585,2087677-2087764,2087874-2087979,
2088103-2088189,2088261-2088309,2088418-2088521,
2088605-2088697,2088900-2088974,2089316-2089384,
2090182-2090250,2090339-2090374,2090471-2090565,
2090836-2090911,2091067-2091153,2091287-2091355,
2091654-2091731,2091836-2091925,2092436-2092642,
2092736-2092879
Length = 841
Score = 29.9 bits (64), Expect = 2.2
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 34 KVDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEMFPETAVIYVAPCSIPSLYN 89
K D++VSE +G + +E + L +FLK G P + ++ P + L+N
Sbjct: 392 KADILVSELLGSFGDNE-LSPECLDGAQRFLKPDGISIPSSYTSFIEPITASKLHN 446
>08_01_0985 -
9960064-9960249,9960327-9960419,9960518-9960578,
9960667-9960774,9960921-9961106,9961427-9962421,
9962626-9962988,9963085-9963333,9963419-9963574
Length = 798
Score = 29.5 bits (63), Expect = 2.9
Identities = 18/68 (26%), Positives = 29/68 (42%)
Query: 58 IARDKFLKEGGEMFPETAVIYVAPCSIPSLYNKWNNVHGVSMSAFAKHLRKNKSTKPEIL 117
+AR KF + G +FP+ + V C++ ++ W + F K R ST I
Sbjct: 123 MARAKFSSQCGTIFPDGSEAAVRNCALQTMAKSWRGWKTTLHTKFVKKGRTPFSTYANIT 182
Query: 118 NIEQKDLL 125
+ D L
Sbjct: 183 PNQWDDFL 190
>06_01_0598 + 4324129-4326150
Length = 673
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 32 NIKVDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEMFPETAVIYVAPCSIPSLYNKW 91
N+ + +S W F LH L S L ++ +K+ + PET YV ++ + Y +W
Sbjct: 587 NMPIKAGISVWGSF--LHGCKLHSRLEFGEEAIKKMAALHPETPDFYVLMSNLYTSYGRW 644
Query: 92 N 92
+
Sbjct: 645 D 645
>04_04_1080 -
30674122-30674204,30674842-30674913,30675261-30675324,
30676358-30676394,30676562-30676675,30676791-30677002,
30677180-30677335,30677556-30678443
Length = 541
Score = 29.1 bits (62), Expect = 3.9
Identities = 21/82 (25%), Positives = 37/82 (45%), Gaps = 8/82 (9%)
Query: 54 DSVLIARDKFLKEG------GEMFPETAVIYVAPCSIP-SLYNKWNNVH-GVSMSAFAKH 105
D ++ ++ ++KEG G + V+ + P P S +W + V M K+
Sbjct: 411 DRIMRLKEGYIKEGSTVSVMGVVQKNDNVLMIVPPPEPISTGCQWAKIEKNVQMLGMIKY 470
Query: 106 LRKNKSTKPEILNIEQKDLLGD 127
R+ KS ++ IE+K GD
Sbjct: 471 FRRRKSFNDVVIAIEEKQTYGD 492
>05_06_0191 -
26265460-26267016,26267858-26268356,26268789-26268859,
26269079-26269515,26269626-26269681,26269682-26270479,
26270918-26270973
Length = 1157
Score = 27.9 bits (59), Expect = 9.0
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 33 IKVDVIVSEWMGFYLLHEGMLDSVLIARDKFLK 65
+++ IV E G ++ ++GML + I RD+ LK
Sbjct: 55 MRISTIVEEAEGRHVRNQGMLQQLKILRDEMLK 87
>03_05_0829 +
28025760-28025846,28026366-28026473,28026721-28026752,
28026823-28026873,28027528-28027589,28027663-28027924,
28028634-28028899,28029138-28029232,28029772-28029948
Length = 379
Score = 27.9 bits (59), Expect = 9.0
Identities = 11/27 (40%), Positives = 17/27 (62%)
Query: 65 KEGGEMFPETAVIYVAPCSIPSLYNKW 91
K+G + P T++ Y+APCS L+ W
Sbjct: 183 KKGLTLNPITSLYYIAPCSFIFLFVPW 209
>02_05_0046 -
25398412-25398594,25399022-25399060,25399896-25400360,
25400758-25400816,25400920-25401748,25402554-25402898,
25402973-25403435,25403537-25403640,25403692-25403901,
25404933-25405088,25405774-25406052,25406237-25406986,
25407141-25407232,25407977-25408361,25408672-25408752,
25409196-25409354,25409399-25409506,25409604-25409666,
25409764-25409835,25409932-25410366
Length = 1758
Score = 27.9 bits (59), Expect = 9.0
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 6/69 (8%)
Query: 93 NVHGVSMSAFAKHLRKNKSTKPEILNIEQKDLLGDEVALCWINLREDSA---SDLNEFSI 149
N + + +S +AK+L N + EI+ + +LLG L+ED A +D N+ SI
Sbjct: 69 NTNSLYLSRYAKNLNMNSQQRIEII---KPELLGSNEESNGDVLQEDGAFGVNDKNDISI 125
Query: 150 QHVVGAKKS 158
+ A K+
Sbjct: 126 HDYLPAMKA 134
>02_01_0224 -
1461924-1462227,1462602-1462798,1463059-1463213,
1464101-1464207,1464289-1464375,1465332-1465414,
1465959-1466027,1466332-1466658,1466744-1466957,
1467170-1467267,1467516-1467554,1467672-1468160
Length = 722
Score = 27.9 bits (59), Expect = 9.0
Identities = 19/85 (22%), Positives = 39/85 (45%), Gaps = 2/85 (2%)
Query: 113 KPEILNIEQKDLLGDEVALCWINLREDSASDLNEFSIQHVVGAKKSGSYEGLCLWFECNF 172
+ E LN K+L + LC + AS++ E S++ +K S E + + +
Sbjct: 247 RAETLNGRNKELSSPQDGLCLNQRNQTYASEVLEESVR--FESKGSKHKEIKTVGVQTDL 304
Query: 173 PSMSETKDENRIILDTSPNSLATHW 197
P +E + ++++D ++L W
Sbjct: 305 PGNNEYLEHKKVLVDRISSNLCAVW 329
>01_07_0246 +
42253379-42253642,42253846-42254084,42254267-42254471,
42254719-42254787,42254869-42255055,42255760-42255926,
42256350-42257045
Length = 608
Score = 27.9 bits (59), Expect = 9.0
Identities = 9/19 (47%), Positives = 15/19 (78%)
Query: 17 LEIIHSKVEDVILPNNIKV 35
+E+ H KV+D++LP N+ V
Sbjct: 44 IELDHDKVQDIVLPGNLTV 62
>01_01_0018 + 139150-140415
Length = 421
Score = 27.9 bits (59), Expect = 9.0
Identities = 17/67 (25%), Positives = 35/67 (52%), Gaps = 2/67 (2%)
Query: 171 NFPSMSETKDENRIILDTS--PNSLATHWKQTAIVLPQEVEVEEGEPIAFQLSMKRDTEH 228
N S++ ++ N IL S P+ L + T +V+P+ V++ +A + ++ EH
Sbjct: 291 NQASLAPSEHFNPAILQESSCPSFLYNNNNDTIVVVPEGVDISGTMDVAGLVINGQEEEH 350
Query: 229 NRRYNLQ 235
R+ N++
Sbjct: 351 ERKTNVE 357
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.317 0.133 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,999,295
Number of Sequences: 37544
Number of extensions: 331463
Number of successful extensions: 684
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 665
Number of HSP's gapped (non-prelim): 18
length of query: 267
length of database: 14,793,348
effective HSP length: 81
effective length of query: 186
effective length of database: 11,752,284
effective search space: 2185924824
effective search space used: 2185924824
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
- SilkBase 1999-2023 -