Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001938-TA|BGIBMGA001938-PA|undefined
(267 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical... 101 7e-22
AL034364-3|CAA22252.1| 630|Caenorhabditis elegans Hypothetical ... 36 0.040
Z66523-7|CAA91416.2| 409|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z81473-4|CAB03891.1| 463|Caenorhabditis elegans Hypothetical pr... 29 2.6
U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical pr... 28 6.0
Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical pr... 28 8.0
AC006795-4|AAK84612.2| 430|Caenorhabditis elegans Hypothetical ... 28 8.0
>AL110477-12|CAB54335.1| 348|Caenorhabditis elegans Hypothetical
protein Y113G7B.17 protein.
Length = 348
Score = 101 bits (241), Expect = 7e-22
Identities = 73/229 (31%), Positives = 120/229 (52%), Gaps = 24/229 (10%)
Query: 17 LEIIHSKVEDVI-LPNNI-KVDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEMFPET 74
+E+I +KVEDV LP I KVD+I+SEWMG+ L +E ML++VL+ARD++L G +FP+
Sbjct: 113 VEVIQAKVEDVHELPGGIEKVDIIISEWMGYCLFYESMLNTVLVARDRWLAPNGMLFPDK 172
Query: 75 AVIYVAPCSIPSLYNK------WNNVHGVSMSAFAKHLRKNKSTKPEILNI-EQKDLLGD 127
A +YV C+I K W++V+G +MSA KN + K +++I + + +
Sbjct: 173 ARLYV--CAIEDRQYKEDKIHWWDSVYGFNMSAI-----KNVAIKEPLVDIVDNAQVNTN 225
Query: 128 EVALCWINLREDSASDLNEFSIQHVVGAKKSGSYEGLCLWFECNFPSMSETKDENRIILD 187
L ++L DL F + +S + +F F +K +
Sbjct: 226 NCLLKDVDLYTVKIEDLT-FKSDFKLRCTRSDYIQAFVTFFTVEF-----SKCHKKTGFS 279
Query: 188 TSPNSLATHWKQTAIVLPQEVEVEEGEPI--AFQLSMKRDTEHNRRYNL 234
T P+ THWKQT L + V++GE I +F+++ ++ E + N+
Sbjct: 280 TGPDVQYTHWKQTVFYLKDALTVKKGEEITGSFEMAPNKNNERDLDINI 328
>AL034364-3|CAA22252.1| 630|Caenorhabditis elegans Hypothetical
protein W06D4.4 protein.
Length = 630
Score = 35.5 bits (78), Expect = 0.040
Identities = 30/162 (18%), Positives = 69/162 (42%), Gaps = 10/162 (6%)
Query: 15 EDLEIIHSKVEDVILPNNIKVDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEMFPET 74
+ + +I + DV + D+IV+E L+ EG L + A ++ K G + P T
Sbjct: 114 DKITVISERSTDVSQIGGSRADIIVAEVFDTELIGEGALRTFKEALERLAKPGCRVVPST 173
Query: 75 AVIYVAPCSIPSLYNKWNNVHGVSMSAFAKHLRKNKSTKPEILNIEQKDL-------LGD 127
+Y+ P L +N++ ++ + L + T + +++ ++ L +
Sbjct: 174 GNVYIVPVE-SHLLKMFNDIPRLNGEKDEEPLGRCSGT-AAVFDVQLSEMKTHEFRELSE 231
Query: 128 EVALCWINLREDSASDLNEFSIQHVVGAKKSGSYEGLCLWFE 169
+ + + +E ++ V A SG+ + L +W++
Sbjct: 232 PIVAFKFDFEHEEKIIFDESFVREAV-AHSSGTIDALLMWWD 272
>Z66523-7|CAA91416.2| 409|Caenorhabditis elegans Hypothetical
protein M05D6.7 protein.
Length = 409
Score = 29.9 bits (64), Expect = 2.0
Identities = 11/28 (39%), Positives = 18/28 (64%)
Query: 170 CNFPSMSETKDENRIILDTSPNSLATHW 197
C+ S+S+ K N++I+D + NSL W
Sbjct: 71 CDITSLSKIKHSNQVIIDEATNSLQIVW 98
>Z81473-4|CAB03891.1| 463|Caenorhabditis elegans Hypothetical
protein C17D12.3 protein.
Length = 463
Score = 29.5 bits (63), Expect = 2.6
Identities = 13/42 (30%), Positives = 26/42 (61%)
Query: 15 EDLEIIHSKVEDVILPNNIKVDVIVSEWMGFYLLHEGMLDSV 56
ED++I +K++D N+ V+V SE +G+ + G+L ++
Sbjct: 391 EDIQIFKTKLDDESSVENVSVEVYWSECIGYCRVTVGVLSAL 432
>U80445-2|AAB37795.2| 1029|Caenorhabditis elegans Hypothetical
protein C50F2.2 protein.
Length = 1029
Score = 29.1 bits (62), Expect = 3.5
Identities = 17/37 (45%), Positives = 22/37 (59%), Gaps = 5/37 (13%)
Query: 192 SLATHWKQTAIVL----PQEVEVEEGEPIAFQLSMKR 224
SL HW IVL PQE +VEE +P++ S+KR
Sbjct: 621 SLKRHWNDKMIVLNGDVPQE-KVEESKPLSIAESLKR 656
>Z83219-2|CAB05695.1| 377|Caenorhabditis elegans Hypothetical
protein C31C9.3 protein.
Length = 377
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/48 (31%), Positives = 27/48 (56%)
Query: 110 KSTKPEILNIEQKDLLGDEVALCWINLREDSASDLNEFSIQHVVGAKK 157
++++P +LNIE + L E + NL+ L+ +SIQ + G +K
Sbjct: 215 ENSEPHVLNIEFEGLNFHETSSVLKNLKNVEEIQLSMYSIQELSGIEK 262
>Z93390-3|CAB07676.1| 680|Caenorhabditis elegans Hypothetical
protein T23B5.1a protein.
Length = 680
Score = 27.9 bits (59), Expect = 8.0
Identities = 18/78 (23%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Query: 12 NSYEDLEIIHSKVEDVILPNNIKVDVIVSEWMGFYLLHEGMLDSVLIARDKFLKEGGEMF 71
N E +H+K K D++VSE + + E ++++ L A +F +
Sbjct: 211 NGVESRVNVHAK-NSTYFETCEKADIVVSETLDCCVFGEKIVETFLDAHVRFSHDRTIFI 269
Query: 72 PETAVIYVAPCSIPSLYN 89
P A +YV S +++
Sbjct: 270 PHQATVYVRLFSCREIFD 287
>AC006795-4|AAK84612.2| 430|Caenorhabditis elegans Hypothetical
protein Y50D4B.4 protein.
Length = 430
Score = 27.9 bits (59), Expect = 8.0
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 15 EDLEIIHSKVEDVILPNNIKVDVIVSEWMG 44
ED++I +K++D N+ V+V S+W G
Sbjct: 400 EDIQIFKTKLDDEGSLENVSVEVYWSDWRG 429
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.317 0.133 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 6,994,537
Number of Sequences: 27539
Number of extensions: 296773
Number of successful extensions: 740
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 733
Number of HSP's gapped (non-prelim): 9
length of query: 267
length of database: 12,573,161
effective HSP length: 80
effective length of query: 187
effective length of database: 10,370,041
effective search space: 1939197667
effective search space used: 1939197667
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 59 (27.9 bits)
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