GeneModel BLAST Result against arabidopsis

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001937-TA|BGIBMGA001937-PA|IPR011497|Protease inhibitor,
Kazal-type, IPR003645|Follistatin-like, N-terminal,
IPR002350|Proteinase inhibitor I1, Kazal
         (132 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At3g45530.1 68416.m04917 DC1 domain-containing protein contains ...    28   1.8  
At1g75050.1 68414.m08717 thaumatin-like protein, putative / path...    28   1.8  
At1g75030.1 68414.m08715 pathogenesis-related thaumatin family p...    28   1.8  
At5g59920.1 68418.m07514 DC1 domain-containing protein contains ...    26   7.2  
At4g12360.1 68417.m01954 protease inhibitor/seed storage/lipid t...    26   9.6  
At3g61980.1 68416.m06961 serine protease inhibitor, Kazal-type f...    26   9.6  

>At3g45530.1 68416.m04917 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 692

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 12/29 (41%), Positives = 17/29 (58%)

Query: 14  RMTRAECCTGASRSPAAWSPKDYDSGEIF 42
           R TR  C +  SR P ++  K YD GE++
Sbjct: 613 RSTRPLCNSCHSRCPGSFIMKSYDGGEVY 641


>At1g75050.1 68414.m08717 thaumatin-like protein, putative /
           pathogenesis-related protein, putative similar to
           thaumatin-like protein [Arabidopsis thaliana]
           GI:2435406, SP|P28493 Pathogenesis-related protein 5
           precursor (PR-5) {Arabidopsis thaliana}; contains Pfam
           profile: PF00314 Thaumatin family
          Length = 257

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 7   CSSVSALRMTRAECCTGASRSPAAWSPKDYDS 38
           C S  A   +   CCTGA  +P   SP  Y +
Sbjct: 189 CKSACAAFNSEEFCCTGAHATPQTCSPTHYSA 220


>At1g75030.1 68414.m08715 pathogenesis-related thaumatin family
           protein identical to thaumatin-like protein [Arabidopsis
           thaliana] GI:2435406; contains Pfam profile: PF00314
           Thaumatin family
          Length = 246

 Score = 28.3 bits (60), Expect = 1.8
 Identities = 13/32 (40%), Positives = 15/32 (46%)

Query: 7   CSSVSALRMTRAECCTGASRSPAAWSPKDYDS 38
           C S  A   +   CCTGA  +P   SP  Y S
Sbjct: 178 CKSACAAFSSPEFCCTGAHATPQTCSPTYYSS 209


>At5g59920.1 68418.m07514 DC1 domain-containing protein contains
           Pfam profile PF03107: DC1 domain
          Length = 710

 Score = 26.2 bits (55), Expect = 7.2
 Identities = 14/37 (37%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 28  PAAWSPKDYDSGEIFFYKVLSGGVPCNACAESCAGMS 64
           PA   P  +D   +F  K+    VPC  C ES  G S
Sbjct: 114 PAIEHPLCHDHAVVFL-KIREEKVPCELCKESIEGPS 149


>At4g12360.1 68417.m01954 protease inhibitor/seed storage/lipid
           transfer protein (LTP) family protein contains Pfam
           protease inhibitor/seed storage/LTP family domain
           PF00234
          Length = 161

 Score = 25.8 bits (54), Expect = 9.6
 Identities = 14/55 (25%), Positives = 21/55 (38%)

Query: 7   CSSVSALRMTRAECCTGASRSPAAWSPKDYDSGEIFFYKVLSGGVPCNACAESCA 61
           C++V     T+  C  G  +SP    P +       F K        N C+E+ A
Sbjct: 64  CTAVETALTTQLSCLCGFIKSPMLLIPFNVTDFNALFSKTCGLTTDPNLCSETAA 118


>At3g61980.1 68416.m06961 serine protease inhibitor, Kazal-type
           family protein contains Pfam domain PF00050: Kazal-type
           serine protease inhibitor domain
          Length = 117

 Score = 25.8 bits (54), Expect = 9.6
 Identities = 10/20 (50%), Positives = 12/20 (60%)

Query: 85  SCRRVSAVCGSDGQTYRSLC 104
           +C R   VCG+DG TY   C
Sbjct: 47  NCFRADPVCGTDGVTYWCGC 66


  Database: arabidopsis
    Posted date:  Oct 3, 2007  3:31 PM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.322    0.131    0.431 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,825,839
Number of Sequences: 28952
Number of extensions: 83544
Number of successful extensions: 162
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 157
Number of HSP's gapped (non-prelim): 6
length of query: 132
length of database: 12,070,560
effective HSP length: 74
effective length of query: 58
effective length of database: 9,928,112
effective search space: 575830496
effective search space used: 575830496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (22.0 bits)
S2: 54 (25.8 bits)