Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001936-TA|BGIBMGA001936-PA|IPR000253|Forkhead-
associated, IPR000467|D111/G-patch, IPR008984|SMAD/FHA
(556 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 31 0.025
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 29 0.13
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat... 27 0.54
Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein RJP... 23 5.0
AY739658-1|AAU85297.1| 664|Apis mellifera hyperpolarization-act... 23 6.6
AY280848-1|AAQ16312.1| 632|Apis mellifera hyperpolarization-act... 23 6.6
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 6.6
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 8.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 8.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 8.7
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 31.1 bits (67), Expect = 0.025
Identities = 23/87 (26%), Positives = 44/87 (50%), Gaps = 4/87 (4%)
Query: 258 ENNGEKCDVMELEDKEQNSEDTQDTSKKDNKASRDLE-DGECSD-SADEDSGSDNECSSN 315
+N+GE D + +++ + ED + S+ + + D + DG S ++D GS +SN
Sbjct: 271 QNDGEGADDRDDDEENEEEEDGRGQSEAEKRLKLDEDADGAVSPLRREKDRGSREYPTSN 330
Query: 316 ASTSTLTDD--ENVAKHHPPCMRVIVR 340
A+ + T + E VA P + ++R
Sbjct: 331 ATDTDGTKERTEEVALDRTPVTQGLLR 357
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 28.7 bits (61), Expect = 0.13
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 528 GFRLLEKMGWSKGEGLGKDSQGEIEP 553
G +LL +MG+ G+GLGK QG P
Sbjct: 162 GAKLLLQMGFEPGKGLGKQLQGISTP 187
>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
receptor protein.
Length = 1040
Score = 26.6 bits (56), Expect = 0.54
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 33 TTSINASSQNNVFELNIPHSSENETPT--SDNDNQSLKNTKS-----TQTPKVKTSDTAT 85
TT+I+ S+Q+ +EL + + P+ S + S N K TQ+ + + + TAT
Sbjct: 960 TTTIDCSTQSEYYELEVKDQKNGKPPSVVSRSTQTSANNDKDTNAVVTQSKEARDNITAT 1019
Query: 86 QMETMKTK 93
+ K +
Sbjct: 1020 KQLNNKAR 1027
>Z26318-1|CAA81227.1| 544|Apis mellifera royal jelly protein
RJP57-1 protein.
Length = 544
Score = 23.4 bits (48), Expect = 5.0
Identities = 12/63 (19%), Positives = 26/63 (41%), Gaps = 2/63 (3%)
Query: 250 DENGDQSIEN--NGEKCDVMELEDKEQNSEDTQDTSKKDNKASRDLEDGECSDSADEDSG 307
++N D N NG + + D +QN D + N+ + + ++G + ++
Sbjct: 444 NQNADNQNANKQNGNRQNDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNGNKQNDN 503
Query: 308 SDN 310
N
Sbjct: 504 KQN 506
Score = 23.4 bits (48), Expect = 5.0
Identities = 11/76 (14%), Positives = 30/76 (39%)
Query: 250 DENGDQSIENNGEKCDVMELEDKEQNSEDTQDTSKKDNKASRDLEDGECSDSADEDSGSD 309
++N + NG + + + QN + NK + + ++G + +
Sbjct: 461 NDNRQNDNKQNGNRQNDNKQNGNRQNDNKQNGNRQNGNKQNDNKQNGNRQNDNKRNGNRQ 520
Query: 310 NECSSNASTSTLTDDE 325
N+ +N + + D++
Sbjct: 521 NDNQNNQNDNNRNDNQ 536
>AY739658-1|AAU85297.1| 664|Apis mellifera
hyperpolarization-activated ion channelvariant L
protein.
Length = 664
Score = 23.0 bits (47), Expect = 6.6
Identities = 10/51 (19%), Positives = 21/51 (41%)
Query: 1 MIELIMSMRXXXXXXXXXXXXXXQCLKEKNVRTTSINASSQNNVFELNIPH 51
+++++M+ CL R S+ A + N+F L++ H
Sbjct: 500 IVDIVMANGEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDH 550
>AY280848-1|AAQ16312.1| 632|Apis mellifera
hyperpolarization-activated ion channel protein.
Length = 632
Score = 23.0 bits (47), Expect = 6.6
Identities = 10/51 (19%), Positives = 21/51 (41%)
Query: 1 MIELIMSMRXXXXXXXXXXXXXXQCLKEKNVRTTSINASSQNNVFELNIPH 51
+++++M+ CL R S+ A + N+F L++ H
Sbjct: 468 IVDIVMANGEVATSLSDGSYFGEICLLTNARRVASVRAETYCNLFSLSVDH 518
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 6.6
Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
Query: 26 LKEKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTS 81
LK+ ++TT ++ N F++N H + + + + S K +K + + T+
Sbjct: 672 LKDSRIKTTEKLSTDPNTHFQVNQSHGIK-RSGSHSWEGDSFKVSKHEEVSRTSTA 726
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 8.7
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 284 KKDNKASRDLEDGECSDSADEDSGSDNECSSNASTS 319
K +N+A+ D G C+ A DS +C N +++
Sbjct: 521 KSENEAA-DFFSGSCAPGAPLDSKLCQQCVGNLASN 555
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 8.7
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 284 KKDNKASRDLEDGECSDSADEDSGSDNECSSNASTS 319
K +N+A+ D G C+ A DS +C N +++
Sbjct: 521 KSENEAA-DFFSGSCAPGAPLDSKLCQQCVGNLASN 555
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 22.6 bits (46), Expect = 8.7
Identities = 11/36 (30%), Positives = 19/36 (52%), Gaps = 1/36 (2%)
Query: 284 KKDNKASRDLEDGECSDSADEDSGSDNECSSNASTS 319
K +N+A+ D G C+ A DS +C N +++
Sbjct: 521 KSENEAA-DFFSGSCAPGAPLDSKLCQQCVGNLASN 555
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.307 0.125 0.344
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 135,508
Number of Sequences: 429
Number of extensions: 5624
Number of successful extensions: 26
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 16
Number of HSP's gapped (non-prelim): 14
length of query: 556
length of database: 140,377
effective HSP length: 61
effective length of query: 495
effective length of database: 114,208
effective search space: 56532960
effective search space used: 56532960
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
S2: 46 (22.6 bits)
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