Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001935-TA|BGIBMGA001935-PA|IPR006644|Dystroglycan-type
cadherin-like, IPR008465|Dystroglycan
(788 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.) 149 1e-35
SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22) 112 1e-24
SB_10616| Best HMM Match : No HMM Matches (HMM E-Value=.) 82 1e-15
SB_50699| Best HMM Match : No HMM Matches (HMM E-Value=.) 34 0.38
SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.89
SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0) 33 0.89
SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 1.2
SB_58944| Best HMM Match : fn3 (HMM E-Value=0.88) 33 1.2
SB_45246| Best HMM Match : zf-MYND (HMM E-Value=0.19) 32 2.0
SB_13031| Best HMM Match : TLD (HMM E-Value=0.18) 31 2.7
SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 3.6
SB_29518| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.7
SB_948| Best HMM Match : Sec62 (HMM E-Value=9.5) 31 4.7
SB_13816| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.7
SB_4088| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 4.7
SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 6.2
SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 8.3
SB_15085| Best HMM Match : V-set (HMM E-Value=0.0064) 30 8.3
>SB_10615| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1884
Score = 149 bits (360), Expect = 1e-35
Identities = 111/380 (29%), Positives = 171/380 (45%), Gaps = 21/380 (5%)
Query: 173 NQPPVLKHHMKKLAITA--GKAFRYIIPTDLFMDQEDGS--NLTFTMYEAENVPLSKNSW 228
N+ P +K + I A G+ Y +P D F D EDG NLT + A+ L K+ W
Sbjct: 960 NKIPTVKKGVTPTPIQAYGGQVITYPVPVDAFEDVEDGGTRNLTLQLLSADGKELPKSYW 1019
Query: 229 IQFIPSDLEVYGLPLEAHVSRWNFIVEAQNSAGLKARGPLDITVQQHKSGRTINHRFIMQ 288
+ F + GLP V NFI+EA++S G K R P I V + + ++ +
Sbjct: 1020 LIFNSDTQTIRGLPGSRQVGVHNFIMEAKDSKGGKVRNPFKIDVGEDTTPTSLLFTVYLD 1079
Query: 289 FTLLKQYNNAIDWQIRALEGIVNLFRDTDMDHLTVLNATQTGDLCEFVWTNDTLP-KDAA 347
+ K + N + ++ ++ IV+ F+ + + + + G F + T+P KD
Sbjct: 1080 YDDDK-FLNDVKVRLGLVDKIVDYFKINENE----MQVDRYGSGVNFTFHLKTIPEKDCN 1134
Query: 348 CPMDDINRLMKIMESESEPGRGSRLLSRAMSPELGVRGVRWEGAGVCAAPPATRAPDTYP 407
P +R I + G+ S A+ PE VR E G C+A T P
Sbjct: 1135 HP----SRTTAINKF-GRRGKTSSAFKNALLPEYNVRQSFTEAIGECSAKGNT------P 1183
Query: 408 PVTRNQVDHITASAGHLLVYKVPEDTFFDPEDGGTRNLILSLRYSDRTEIPAGHWLQFDA 467
P+ V I A H +Y++P DTFFD E G TRNL L LR DR+ +P G W+ +
Sbjct: 1184 PLLLTPVGTIAVQANHGFIYRIPYDTFFDREYGNTRNLDLRLRAGDRSRLPPGSWVTLEE 1243
Query: 468 NNQEFYGLPTTTDEGSVSYQLIAEDSSKKTAYDSLIVEVVKAPPIRPTVEFQMTLEYPFL 527
QE Y +P GS + L+A D + ++ + + P+ PT F + L+
Sbjct: 1244 AEQEIYIMPDEKLTGSHKFVLVAVDPADNKMKTHDVITIKVSEPVPPTTIFSLLLDTDEK 1303
Query: 528 KLAFNAKNKRKVVEKLANLF 547
N K + ++ KLA F
Sbjct: 1304 AFQGNVKTRMGLLTKLAEYF 1323
Score = 138 bits (335), Expect = 1e-32
Identities = 147/580 (25%), Positives = 244/580 (42%), Gaps = 49/580 (8%)
Query: 173 NQPPVLKHHMKKLAITAGKAFRYIIPTDLFMDQEDGS--NLTFTMYEAENVPLSKNSWIQ 230
N PP+L + +A+ A F Y IP D F D+E G+ NL + + L SW+
Sbjct: 1181 NTPPLLLTPVGTIAVQANHGFIYRIPYDTFFDREYGNTRNLDLRLRAGDRSRLPPGSWVT 1240
Query: 231 FIPSDLEVYGLPLEAHVSRWNFIVEAQNSAGLKARGPLDITVQQHKSGRTINHRFIMQFT 290
++ E+Y +P E F++ A + A K + IT++ + ++ T
Sbjct: 1241 LEEAEQEIYIMPDEKLTGSHKFVLVAVDPADNKMKTHDVITIKVSEPVPPTTIFSLLLDT 1300
Query: 291 LLKQYNNAIDWQIRALEGIVNLFRDTDMD-HLTVLNATQTGDLCEFVWTNDTLPKDAACP 349
K + + ++ L + F+ T D H+ G F ++N +P C
Sbjct: 1301 DEKAFQGNVKTRMGLLTKLAEYFKVTIPDIHIISYKPEDPGIRFTFGFSN--VPTKP-CD 1357
Query: 350 MDDINRLMKIMESESEPGRGSRLLSRAMSPELGVRGVRWEGAGVCAAPPATRAPDTYPPV 409
+ +L+++ +S+ G L A+ V+ R E G C AP AP +
Sbjct: 1358 SPALAKLIELF-GDSKVTDG---LKDALKSGFTVKNGRVEQVGACKAPDINTAPKLF--- 1410
Query: 410 TRNQVDHITASAGHLLVYKVPEDTFFDPEDGGTRNLILSLRYS--DRTEIPAGHWLQFDA 467
N D + L + +P D+FFD ED T+NL L+L+ D + W+ ++
Sbjct: 1411 --NAFDRLNVFGTQGLRFDIPGDSFFDKEDLYTKNLTLTLKLGEGDLGSLLPTSWILLNS 1468
Query: 468 NNQEFYGLPTTTDEGSVSYQLIAEDSSKKTAYDSLIVEVVKAPPIRPTVEFQMTLEYPFL 527
+Q+ Y LP + G + L A DS A+D+ V V+K +F + L +
Sbjct: 1469 TSQQIYALPMSDAIGLHKFVLEAADSGGLKAFDAFEVSVIK-DEAGFNHQFTIFLNFDNA 1527
Query: 528 KLAFNAKNKRKVVEKLANLFGQKETDNIRIQSITNNPTSIIWYNTSLPMDRCPKAEIEQL 587
N + +VEK+A FG T IR+ + P + ++ +P+D C L
Sbjct: 1528 TFMENVHVRLALVEKIAKFFGVNFT-AIRVDNAGLGP-FMTFHVAGIPLDDCNN---PLL 1582
Query: 588 RKMIIVDDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLCAEQNTKVSKVPPALYPGAP 647
KM +EN D + L P + TK GA
Sbjct: 1583 LKM-------------QENFGP--DGVSPALKAALAPYPVAGGDYTKTKPCGATAGIGA- 1626
Query: 648 NSQNSKTGSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLYRRRRTGKMSVGDEEERQAF 707
S G + +IPA+V+ +IL G+ ++ R RR ++S E+R+ F
Sbjct: 1627 ----SGVGDRGPGLWWTYALIPAIVLAVVILTIGLCVLLMMRARRKQRLSA---EDRKTF 1679
Query: 708 RSKGIPVIFQDELEERTDTEPIHKSPVIMREEKPPLLPPA 747
K PV+F++E + + D + K P+++ EKPPL PPA
Sbjct: 1680 IYKRKPVVFKEEYDVKED---LIKQPLVLPNEKPPLPPPA 1716
Score = 136 bits (329), Expect = 6e-32
Identities = 110/387 (28%), Positives = 178/387 (45%), Gaps = 21/387 (5%)
Query: 171 PVNQPPVLKHHMKKLAITAGKAFRYIIPTDLFMDQEDG--SNLTFTMYEAENVPLSKNSW 228
P ++PPV+ + + + +G++ I + F D DG SNL + + LS NSW
Sbjct: 740 PDSRPPVVGAPIPAIDVFSGQSIMRDIAPNTFKDGIDGDASNLKLDLLARGGIRLSPNSW 799
Query: 229 IQFIPSDLEVYGLPLEAHVSRWNFIVEAQNSAGLKARGPLDITVQQHKSGRTINHRFIMQ 288
IQ L+++GL E F +EA NSAGLKA P ++ + + NH F +
Sbjct: 800 IQLNGPALQIFGLATE-DFGLHEFDLEATNSAGLKATAPFEVNIARDPV--IYNHEFTLL 856
Query: 289 FTLLKQ-YNNAIDWQIRALEGIVNLFRDTDMDHLTVLNATQTGDLCEFVWTNDTLPKDAA 347
K + N + ++ L + F + D+ + V + + T D FV+ +P +
Sbjct: 857 LDYEKDTFLNVVSVRLELLRKLGKYF-NVDVSKIRVKSYSATPDGVNFVFRIAGIPYEP- 914
Query: 348 CPMDDINRLMKIMESESEPGRGSRLLSRAMSPELGVRGVRWEGAGVCAAPPATRAPDTYP 407
C D+ + + +S S A+ PE V+ +E G CA A + P
Sbjct: 915 CDSADLQQAITKFGKDSV----STAFINALKPEYPVKKASYETLGKCA---ANKIPTVKK 967
Query: 408 PVTRNQVDHITASAGHLLVYKVPEDTFFDPEDGGTRNLILSLRYSDRTEIPAGHWLQFDA 467
VT I A G ++ Y VP D F D EDGGTRNL L L +D E+P +WL F++
Sbjct: 968 GVTPTP---IQAYGGQVITYPVPVDAFEDVEDGGTRNLTLQLLSADGKELPKSYWLIFNS 1024
Query: 468 NNQEFYGLPTTTDEGSVSYQLIAEDSSKKTAYDSLIVEVVKAPPIRPT-VEFQMTLEYPF 526
+ Q GLP + G ++ + A+DS + ++V PT + F + L+Y
Sbjct: 1025 DTQTIRGLPGSRQVGVHNFIMEAKDSKGGKVRNPFKIDV--GEDTTPTSLLFTVYLDYDD 1082
Query: 527 LKLAFNAKNKRKVVEKLANLFGQKETD 553
K + K + +V+K+ + F E +
Sbjct: 1083 DKFLNDVKVRLGLVDKIVDYFKINENE 1109
Score = 125 bits (301), Expect = 2e-28
Identities = 104/419 (24%), Positives = 186/419 (44%), Gaps = 25/419 (5%)
Query: 172 VNQPPVLKHHMKKLAITAGKAFRYIIPTDLFMDQEDG-SNLTFTMYEAENVPLSKNSWIQ 230
+N PV+ + ++ G+A Y +P++ F D EDG S+LT M + L SW+
Sbjct: 525 INSRPVVDQGVSSISAITGQALSYKVPSNAFRDAEDGPSDLTLNMLTSGLAKLPAMSWVL 584
Query: 231 FIPSDLEVYGLPLEAHVSRWNFIVEAQNSAGLKARGPLDITVQQHKSGRTINHRFIMQFT 290
F ++GLP+E ++++++A + GLKAR I VQ + NH F +
Sbjct: 585 FNQQTNTIFGLPMEGMSGTYDYVLQATDRGGLKARDDFQINVQADNT--LYNHEFTIVMD 642
Query: 291 LLK-QYNNAIDWQIRALEGIVNLFRDTDMDHLTVLNATQTGDLCEFVWTNDTLPKDAACP 349
+ Q+++ + +++ L I F+ T +DH+ V +A G F + N P
Sbjct: 643 VDNVQFSSNVALRLQLLTLIAQYFQ-TTIDHVRV-SAFGAGVTFSFRFDN--------IP 692
Query: 350 MDDINRLMKIMESESEPGRGSRLLSRAMSPELGVRGVRWEGAGVCAAPPATRAPDTYPPV 409
++ N+ ++ M + + +RA+SP VR + G C PD+ PPV
Sbjct: 693 YNECNKRLETMVNLFGKDTLNPSFTRALSPNYPVRSGSHKLLGPC------NKPDSRPPV 746
Query: 410 TRNQVDHITASAGHLLVYKVPEDTFFDPEDGGTRNLILSLRYSDRTEIPAGHWLQFDANN 469
+ I +G ++ + +TF D DG NL L L + W+Q +
Sbjct: 747 VGAPIPAIDVFSGQSIMRDIAPNTFKDGIDGDASNLKLDLLARGGIRLSPNSWIQLNGPA 806
Query: 470 QEFYGLPTTTDEGSVSYQLIAEDSSKKTAYDSLIVEVVKAPPIRPTVEFQMTLEYPFLKL 529
+ +GL T D G + L A +S+ A V + + P I EF + L+Y
Sbjct: 807 LQIFGL-ATEDFGLHEFDLEATNSAGLKATAPFEVNIARDPVIY-NHEFTLLLDYEKDTF 864
Query: 530 AFNAKNKRKVVEKLANLFGQKETDNIRIQSITNNPTSI--IWYNTSLPMDRCPKAEIEQ 586
+ +++ KL F + IR++S + P + ++ +P + C A+++Q
Sbjct: 865 LNVVSVRLELLRKLGKYF-NVDVSKIRVKSYSATPDGVNFVFRIAGIPYEPCDSADLQQ 922
Score = 77.8 bits (183), Expect = 3e-14
Identities = 48/175 (27%), Positives = 84/175 (48%), Gaps = 12/175 (6%)
Query: 139 PPPWLFRQPESTVTEGKSTIIGQTTETVTFAMPVNQPPVLKHHMKKLAITAGKAFRYIIP 198
P P P + + + I TVT +P N PV+ + ++ + +G+ R++IP
Sbjct: 295 PTPTATIAPPPSRVDASTVSIPTVRPTVT--VPSNNAPVVISRLSRVTVYSGQLIRFLIP 352
Query: 199 TDLFMDQEDGSN--LTFTMYEAENVPLSKNSWIQFIPSDLEVYGLPLEAHVSRWNFIVEA 256
+ F D+EDG L + + +SWI P+ E+YGL + + +F+VEA
Sbjct: 353 ENTFSDREDGGTRRLNLKLLTLTGATIIPSSWILLNPASQEIYGLSITDLTTSHDFLVEA 412
Query: 257 QNSAGLKARGPLDITVQQHKSGRTINHRFIMQFTL------LKQYNNAIDWQIRA 305
++S GL R ++ V+Q NH F ++F+L +K Y A+ + + A
Sbjct: 413 KDSGGLFTRQAIEFRVEQDL--HQYNHEFTLEFSLSDNSAFMKNYVRAVSFNLGA 465
Score = 64.1 bits (149), Expect = 4e-10
Identities = 42/134 (31%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 169 AMPVNQPPVLKHHMKKLAITAGKAFRYIIPTDLFMDQED--GSNLTFTMY--EAENVPLS 224
A +N P L + +L + + R+ IP D F D+ED NLT T+ E + L
Sbjct: 1400 APDINTAPKLFNAFDRLNVFGTQGLRFDIPGDSFFDKEDLYTKNLTLTLKLGEGDLGSLL 1459
Query: 225 KNSWIQFIPSDLEVYGLPLEAHVSRWNFIVEAQNSAGLKARGPLDITVQQHKSGRTINHR 284
SWI + ++Y LP+ + F++EA +S GLKA +++V + ++G NH
Sbjct: 1460 PTSWILLNSTSQQIYALPMSDAIGLHKFVLEAADSGGLKAFDAFEVSVIKDEAG--FNH- 1516
Query: 285 FIMQFTLLKQYNNA 298
QFT+ ++NA
Sbjct: 1517 ---QFTIFLNFDNA 1527
Score = 62.5 bits (145), Expect = 1e-09
Identities = 33/96 (34%), Positives = 48/96 (50%)
Query: 398 PATRAPDTYPPVTRNQVDHITASAGHLLVYKVPEDTFFDPEDGGTRNLILSLRYSDRTEI 457
P P PV +++ +T +G L+ + +PE+TF D EDGGTR L L L I
Sbjct: 320 PTVTVPSNNAPVVISRLSRVTVYSGQLIRFLIPENTFSDREDGGTRRLNLKLLTLTGATI 379
Query: 458 PAGHWLQFDANNQEFYGLPTTTDEGSVSYQLIAEDS 493
W+ + +QE YGL T S + + A+DS
Sbjct: 380 IPSSWILLNPASQEIYGLSITDLTTSHDFLVEAKDS 415
>SB_12028| Best HMM Match : DAG1 (HMM E-Value=0.22)
Length = 1249
Score = 112 bits (269), Expect = 1e-24
Identities = 102/370 (27%), Positives = 159/370 (42%), Gaps = 39/370 (10%)
Query: 398 PATRAPDTYPP--VTRNQVDHITASAGHLLVYKVPEDTFFDPEDGGTRNLILSL----RY 451
P + A PP V N + +T ++G + Y+VP DTF D +DG TRNL L L
Sbjct: 820 PTSTATVVIPPDLVVVNDIGRVTVTSGKVFNYQVPADTFHDRKDGNTRNLTLELYLVGPQ 879
Query: 452 SDRTEIPAGHWLQFDANNQEFYGLPTTTDEGSVSYQLI---AEDSSKKTAYDSLIVEVVK 508
S + EIP WLQFD Q GLP E +L A +S AYD+ + V+
Sbjct: 880 STQAEIPG--WLQFDDKTQTISGLPMDPSETLTRGELFILKARNSRGDIAYDAFEILVLD 937
Query: 509 APPIRPTVEFQMTLEYPFLKLAFNAKNKRKVVEKLANLFGQKETDNIRIQSITNNPTSII 568
+ + VE L+ + + N + ++ +A+ +G IR+ I
Sbjct: 938 S-QTQHAVELSTRLDNNYSIFSNNLTQRLLLLSAIASFYGDASPGYIRVLRFQEGSVMFI 996
Query: 569 WYNTSLPMDRCPKAEIEQLRKMIIVDDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLC 628
W N +LP C K V +R G + Q F V+S + +G+C
Sbjct: 997 WTNDTLPTSECDP------EKNARVSNRVEEDGEVTNAFRQALAPKFPVISAYSSLVGVC 1050
Query: 629 AEQNTKVSKVPPALYPGAPNSQNSKTGSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLY 688
N + +P + PGA +S+ S V ++P V+V IL+ I LY
Sbjct: 1051 ---NRTI--IPASAIPGARDSEES-------SDLWVKHVLPG-VLVAFILIIIAILLFLY 1097
Query: 689 RRRRTGKMSVGDEEERQAFRSKGIPVIFQDELEERTDTEPIHKSPVIMREEKPPLLPPAP 748
RR+ K + + ER+ ++ K P+I E+E +P+ P+++ + P P
Sbjct: 1098 LRRKRPKPA---DPERRTYK-KRKPIILDPEME----LKPLPGKPLVLPSDDPSQPPSYI 1149
Query: 749 DYRSGEDAPY 758
S + APY
Sbjct: 1150 SDTSLDKAPY 1159
Score = 78.6 bits (185), Expect = 2e-14
Identities = 64/241 (26%), Positives = 116/241 (48%), Gaps = 20/241 (8%)
Query: 163 TETVTFAMPVNQPPVLKHHMKKLAITAGKAFRYIIPTDLFMDQEDGS--NLTFTMY--EA 218
T T T +P + V+ + + ++ +T+GK F Y +P D F D++DG+ NLT +Y
Sbjct: 821 TSTATVVIPPDL--VVVNDIGRVTVTSGKVFNYQVPADTFHDRKDGNTRNLTLELYLVGP 878
Query: 219 ENVPLSKNSWIQFIPSDLEVYGLPLEAH--VSRWN-FIVEAQNSAGLKARGPLDITV--Q 273
++ W+QF + GLP++ ++R FI++A+NS G A +I V
Sbjct: 879 QSTQAEIPGWLQFDDKTQTISGLPMDPSETLTRGELFILKARNSRGDIAYDAFEILVLDS 938
Query: 274 QHKSGRTINHRFIMQFTLLKQYNNAIDWQIRALEGIVNLFRDTDMDHLTVLNATQTGDLC 333
Q + ++ R +++ ++N + ++ L I + + D ++ VL Q G +
Sbjct: 939 QTQHAVELSTRLDNNYSI---FSNNLTQRLLLLSAIASFYGDASPGYIRVLR-FQEGSVM 994
Query: 334 EFVWTNDTLPKDAACPMDDINRLMKIMESESEPGRGSRLLSRAMSPELGVRGVRWEGAGV 393
F+WTNDTLP + C D + ++ E G + +A++P+ V GV
Sbjct: 995 -FIWTNDTLP-TSEC---DPEKNARVSNRVEEDGEVTNAFRQALAPKFPVISAYSSLVGV 1049
Query: 394 C 394
C
Sbjct: 1050 C 1050
>SB_10616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 856
Score = 82.2 bits (194), Expect = 1e-15
Identities = 61/223 (27%), Positives = 106/223 (47%), Gaps = 11/223 (4%)
Query: 176 PVLKHHMKKLAITAGKAFRYIIPTDLFM---DQEDGSNLTFTMYEAENVPLSKNSWIQFI 232
P+L + +LA G+AF + +P D F + E SNL TMY +SK SWIQF
Sbjct: 4 PLLLKPLDQLAAFIGQAFLFKVPDDTFYPTYNAESSSNLRLTMYTKNGGEISKTSWIQFE 63
Query: 233 PSDLEVYGLPLEAHVSRWNFIVEAQNSAGLKARGPLDITVQQHKSGRTINHRFIMQFTL- 291
PS VYG PL + + F+V A N G A+ +++ ++++ +G+ NH F++
Sbjct: 64 PSSRNVYGFPLPGNKGVFKFLVSATNQRGQSAKDFMEVDIKEN-TGQ-YNHEFVINTDFN 121
Query: 292 LKQYNNAIDWQIRALEGIVNLFRDTDMDHLTVLNATQTGDLCEFVWTNDTLPKDAACPMD 351
L + + + + + + D+ + + + Q D E + +T+P A C
Sbjct: 122 LVSFMADVLVRFEFVSRVGRYIANEDISSVWLKSFNQ--DTREVTISLNTVPY-APCNKP 178
Query: 352 DINRLMKIMESESEPGRGSRLLSRAMSPELGVRGVRWEGAGVC 394
+ RL+ S++ G ++ AMS + V V+ G+C
Sbjct: 179 KLKRLLTRFVSDT--GAVNQNFQTAMSEKFPVSSVKMNYLGIC 219
Score = 79.8 bits (188), Expect = 8e-15
Identities = 47/225 (20%), Positives = 106/225 (47%), Gaps = 7/225 (3%)
Query: 408 PVTRNQVDHITASAGHLLVYKVPEDTFFDPEDG-GTRNLILSLRYSDRTEIPAGHWLQFD 466
P+ +D + A G ++KVP+DTF+ + + NL L++ + EI W+QF+
Sbjct: 4 PLLLKPLDQLAAFIGQAFLFKVPDDTFYPTYNAESSSNLRLTMYTKNGGEISKTSWIQFE 63
Query: 467 ANNQEFYGLPTTTDEGSVSYQLIAEDSSKKTAYDSLIVEVVKAPPIRPTVEFQMTLEYPF 526
+++ YG P ++G + + A + ++A D + V+ +K + EF + ++
Sbjct: 64 PSSRNVYGFPLPGNKGVFKFLVSATNQRGQSAKDFMEVD-IKENTGQYNHEFVINTDFNL 122
Query: 527 LKLAFNAKNKRKVVEKLANLFGQKETDNIRIQSITNNPTSIIWYNTSLPMDRCPKAEIEQ 586
+ + + + V ++ ++ ++ ++S + + ++P C K ++++
Sbjct: 123 VSFMADVLVRFEFVSRVGRYIANEDISSVWLKSFNQDTREVTISLNTVPYAPCNKPKLKR 182
Query: 587 LRKMIIVDDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLCAEQ 631
L + D GA+ +N + F V S+ +N LG+C E+
Sbjct: 183 LLTRFVSDT-----GAVNQNFQTAMSEKFPVSSVKMNYLGICLEE 222
>SB_50699| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 450
Score = 34.3 bits (75), Expect = 0.38
Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 2/71 (2%)
Query: 628 CAEQNTKVSKVPPALYPGAPNSQNSKTGSAAEQSYLVTFII--PAVVIVCMILLAGVIAC 685
C QN V+ PP Y + + G +S TFI P ++ G++AC
Sbjct: 245 CQPQNPPVAVSPPHFYQSNSSLVKAVRGMHPVKSEHATFIDIEPEWLLALFARCLGMVAC 304
Query: 686 VLYRRRRTGKM 696
++ RR+ G M
Sbjct: 305 AVHERRKAGSM 315
>SB_50016| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2065
Score = 33.1 bits (72), Expect = 0.89
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 3/65 (4%)
Query: 640 PALYPGAPNSQNSKTGSAAE--QSYLVTFIIPAVVIVCMILLAGVIACVLYRRRRTGKMS 697
P +P A + N T S E QS + +I V+ C++L+A + LY+RR +
Sbjct: 1989 PDNFPAAKDD-NEMTSSGVEHAQSLVNPLVIGIAVLCCVLLVALAVVWTLYKRRGDSPQT 2047
Query: 698 VGDEE 702
V E+
Sbjct: 2048 VNAEQ 2052
>SB_43870| Best HMM Match : Pkinase_Tyr (HMM E-Value=0)
Length = 869
Score = 33.1 bits (72), Expect = 0.89
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Query: 628 CAEQNTKVSKVPPALYPGAPNSQNSKTG--SAAEQSYLVTFIIPAVVIVCMILLAGVIAC 685
C + N V K P + P + ++ T S+ EQ++ VT + VV+ ++L+ C
Sbjct: 215 CMDGNLAVPKKPSTVTPTSRSTAILATAARSSKEQTFEVTMSVVGVVVFIVLLVFIFCIC 274
Query: 686 VLYRRRRTGKMSVGDE 701
L +R+ GK S E
Sbjct: 275 RLRKRQIKGKNSANIE 290
>SB_20837| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1304
Score = 32.7 bits (71), Expect = 1.2
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 12/75 (16%)
Query: 422 GHLLVYKVPEDTFFDPEDGGTRNLILSLRYSDRTEIPAGHWLQFDANNQEFYGLPTTTDE 481
G +YK+P F D I S RT +P +WL +D + QE YG+P+ D
Sbjct: 527 GMAFIYKIPSKIFNCKLD-----YIEISEGSSRT-LP--NWLAYDEHKQELYGVPSMEDL 578
Query: 482 GSVSYQL---IAEDS 493
G+ SY L IA+DS
Sbjct: 579 GT-SYILIVAIADDS 592
>SB_58944| Best HMM Match : fn3 (HMM E-Value=0.88)
Length = 697
Score = 32.7 bits (71), Expect = 1.2
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
Query: 655 GSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLYRRRRTGKMSVGDEEERQA 706
G A + T+ I +V++ ++LL VI VLYR+R K VG E+ +A
Sbjct: 565 GQRATPLHKSTWFIVLLVLIALLLLFVVIV-VLYRKRGGAKYQVGKREKERA 615
>SB_45246| Best HMM Match : zf-MYND (HMM E-Value=0.19)
Length = 1828
Score = 31.9 bits (69), Expect = 2.0
Identities = 16/37 (43%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Query: 659 EQSYLVT--FIIPAVVIVCMILLAGVIACVLYRRRRT 693
E+S L T I+ VV+VC+I+LA ++A + YR+R++
Sbjct: 1319 EESGLKTTYIIVIVVVVVCLIILA-IVATIFYRKRKS 1354
>SB_13031| Best HMM Match : TLD (HMM E-Value=0.18)
Length = 175
Score = 31.5 bits (68), Expect = 2.7
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 40 HILYDDVYDHPSSGHDAGHCSGYDACDYAGD 70
+I YDDV D +SG D G S D CDYA D
Sbjct: 135 YIGYDDVVDDGNSGKDIG--SDDDDCDYAYD 163
>SB_54662| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 673
Score = 31.1 bits (67), Expect = 3.6
Identities = 17/31 (54%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 40 HILYDDVYDHPSSGHDAGHCSGYDACDYAGD 70
+I YDDV D SG D G S D CDYA D
Sbjct: 528 YIGYDDVVDDGDSGKDIG--SDDDDCDYAYD 556
>SB_29518| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 411
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 659 EQSYLVTFIIPAVVIVCMILLAGVIACVLYRRR 691
E+S ++ AVV+V + +L V C+L+RR+
Sbjct: 339 EESSQTEIVVIAVVVVIVAVLVAVACCILFRRK 371
>SB_948| Best HMM Match : Sec62 (HMM E-Value=9.5)
Length = 306
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 659 EQSYLVTFIIPAVVIVCMILLAGVIACVLYRRR 691
E+S ++ AVV+V + +L V C+L+RR+
Sbjct: 156 EESSQTEIVVIAVVVVIVAVLVAVACCILFRRK 188
>SB_13816| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 659 EQSYLVTFIIPAVVIVCMILLAGVIACVLYRRR 691
E+S ++ AVV+V + +L V C+L+RR+
Sbjct: 106 EESSQTEIVVIAVVVVIVAVLVAVACCILFRRK 138
>SB_4088| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 895
Score = 30.7 bits (66), Expect = 4.7
Identities = 12/33 (36%), Positives = 21/33 (63%)
Query: 659 EQSYLVTFIIPAVVIVCMILLAGVIACVLYRRR 691
E+S ++ AVV+V + +L V C+L+RR+
Sbjct: 746 EESSQTEIVVIAVVVVIVAVLVAVACCILFRRK 778
>SB_43495| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1994
Score = 30.3 bits (65), Expect = 6.2
Identities = 20/84 (23%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 156 STIIGQTTETVTFAMPVNQPPVLKHH-MKKLAITAGKAFRYIIPTDLFMDQEDGSNLTFT 214
+T + T++ + ++ PV + P L + K ++ + + + +NLT T
Sbjct: 729 ATPLSPTSQLIQYSTPVTETPRLTSVVLSKENQSSTTVIQTVSIASQTSSYHEFANLTAT 788
Query: 215 MYEAENVPLSKNSWIQFIPSDLEV 238
+ E LS N IQ +PS + V
Sbjct: 789 QTQGEKQTLSLNETIQILPSPITV 812
>SB_46179| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 4856
Score = 29.9 bits (64), Expect = 8.3
Identities = 25/102 (24%), Positives = 45/102 (44%), Gaps = 8/102 (7%)
Query: 235 DLEVYGLPLEAHVSR-WNFIVEAQNSAGLKARG-PLDITVQQHKSGRTINHRFIMQFTLL 292
DL+ G+ H + W + +++ G G PL I H++G + + Q T
Sbjct: 4290 DLDAIGITRTGHQRKIWMAVNALRDTDGSNNNGTPLSIGKTSHRTGAS---KISPQMTQQ 4346
Query: 293 KQYNNAIDWQIRALEGIVN---LFRDTDMDHLTVLNATQTGD 331
+ + D AL VN ++R+TD+D +T + + D
Sbjct: 4347 VEADEIYDVPPLALRASVNEPTVYRETDLDQITGAKSMTSSD 4388
>SB_15085| Best HMM Match : V-set (HMM E-Value=0.0064)
Length = 224
Score = 29.9 bits (64), Expect = 8.3
Identities = 24/86 (27%), Positives = 37/86 (43%), Gaps = 1/86 (1%)
Query: 569 WYNTSLPMDRCPKAEIEQLRKMIIVDDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLC 628
W + SL D K E + + DD + L E +D+V ++ + + LN L
Sbjct: 116 WVSYSLEFDCQGKTTRETVSVCVPSDDTKNIFSVLCEALDRVKPRNIESVGWRLNGQNLV 175
Query: 629 AEQNTKVSKVPPALYPGAPNSQNSKT 654
+N V + P PG P+ Q KT
Sbjct: 176 VIENGTVKRNPLFKGPGRPH-QGQKT 200
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,668,798
Number of Sequences: 59808
Number of extensions: 1166102
Number of successful extensions: 2762
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 2705
Number of HSP's gapped (non-prelim): 38
length of query: 788
length of database: 16,821,457
effective HSP length: 88
effective length of query: 700
effective length of database: 11,558,353
effective search space: 8090847100
effective search space used: 8090847100
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 64 (29.9 bits)
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