Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001935-TA|BGIBMGA001935-PA|IPR006644|Dystroglycan-type
cadherin-like, IPR008465|Dystroglycan
(788 letters)
Database: human
224,733 sequences; 73,234,838 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L19711-1|AAA81779.1| 895|Homo sapiens dystroglycan protein. 188 9e-47
BC014616-1|AAH14616.1| 895|Homo sapiens dystroglycan 1 (dystrop... 188 9e-47
BC012740-1|AAH12740.1| 895|Homo sapiens dystroglycan 1 (dystrop... 188 9e-47
AL109804-4|CAC17543.1| 1709|Homo sapiens sialic acid binding Ig-... 36 0.56
AK024462-1|BAB15752.1| 977|Homo sapiens FLJ00055 protein protein. 36 0.56
AF230073-1|AAK00757.1| 1709|Homo sapiens sialoadhesin protein. 36 0.56
BC130277-1|AAI30278.1| 1444|Homo sapiens phosphoinositide-3-kina... 34 1.7
AJ000008-1|CAA03853.1| 1448|Homo sapiens PI3-kinase protein. 34 1.7
AF293639-1|AAG33381.1| 715|Homo sapiens dioxin receptor repress... 33 3.0
AK124948-1|BAC86004.1| 347|Homo sapiens protein ( Homo sapiens ... 33 3.9
AK124467-1|BAC85857.1| 193|Homo sapiens protein ( Homo sapiens ... 33 3.9
X89013-1|CAA61418.1| 573|Homo sapiens anti-mullerian hormone ty... 33 5.2
U29700-1|AAC50328.1| 573|Homo sapiens anti-mullerian hormone ty... 33 5.2
BC126316-1|AAI26317.1| 573|Homo sapiens anti-Mullerian hormone ... 33 5.2
AF283321-1|AAK52433.1| 1611|Homo sapiens low density lipoprotein... 33 5.2
AF172932-1|AAD48497.1| 573|Homo sapiens MIS type II receptor pr... 33 5.2
AF077820-1|AAC72791.1| 1615|Homo sapiens LDL receptor member LR3... 33 5.2
AF064548-1|AAC36467.1| 1615|Homo sapiens low-density lipoprotein... 33 5.2
AB017498-1|BAA33051.1| 1615|Homo sapiens Lipoprotein Receptor Re... 33 5.2
>L19711-1|AAA81779.1| 895|Homo sapiens dystroglycan protein.
Length = 895
Score = 188 bits (457), Expect = 9e-47
Identities = 117/356 (32%), Positives = 182/356 (51%), Gaps = 17/356 (4%)
Query: 408 PVTRNQVDHITASAGHLLVYKVPEDTFFDPEDGGTRNLILSLRYSDRTEIPAGHWLQFDA 467
P +N +D + A G K+P DTF+D ED T L L+L+ ++ + W+QF++
Sbjct: 497 PELKNHIDRVDAWVGTYFEVKIPSDTFYDHEDTTTDKLKLTLKLREQQLVGEKSWVQFNS 556
Query: 468 NNQEFYGLPTTTDEGSVSYQLIAEDSSKKTAYDSLIVEVVKAPP-IRPTVEFQMTLEYPF 526
N+Q YGLP ++ G Y + A D +A D+ + V + P R F+
Sbjct: 557 NSQLMYGLPDSSHVGKHEYFMHATDKGGLSAVDAFEIHVHRRPQGDRAPARFKAKFVGDP 616
Query: 527 LKLAFNAKNKRKVVEKLANLFGQKETDNIRIQSITNNPTSIIWYNTSLPMDRCPKAEIEQ 586
+ + K +V+KLA FG + I +Q+IT + W N +LP++ CPK +I
Sbjct: 617 ALVLNDIHKKIALVKKLAFAFGDRNCSTITLQNITRGSIVVEWTNNTLPLEPCPKEQIAG 676
Query: 587 LRKMIIVDDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLCAEQNTKVSKVPPALYPG- 645
L + I DD G R + DFK SIT+ G C + VPP P
Sbjct: 677 LSRRIAEDD-----GKPRPAFSNALEPDFKATSITVTGSGSCRHLQF-IPVVPPRRVPSE 730
Query: 646 APNSQ---NSKTGSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLYRRRRTGKMSVGDEE 702
AP ++ S+ + YL T +IPAVV+ ++L+AG+IA + YR++R GK+++ E
Sbjct: 731 APPTEVPDRDPEKSSEDDVYLHT-VIPAVVVAAILLIAGIIAMICYRKKRKGKLTL---E 786
Query: 703 ERQAFRSKGIPVIFQDELEERTDTEPIHKSPVIMREEKPPLLPPA-PDYRSGEDAP 757
++ F KG+P+IF DEL++ + P P+I++EEK PL PP P+ E P
Sbjct: 787 DQATFIKKGVPIIFADELDD-SKPPPSSSMPLILQEEKAPLPPPEYPNQSVPETTP 841
Score = 97.1 bits (231), Expect = 2e-19
Identities = 75/266 (28%), Positives = 115/266 (43%), Gaps = 14/266 (5%)
Query: 152 TEGKSTIIGQTTETVTFAMPVNQPPVLKHHMKKLAITAGKAFRYIIPTDLFMDQEDGSN- 210
T T I TT V NQ P LK+H+ ++ G F IP+D F D ED +
Sbjct: 473 TASPPTRIRTTTSGVPRGGEPNQRPELKNHIDRVDAWVGTYFEVKIPSDTFYDHEDTTTD 532
Query: 211 -LTFTMYEAENVPLSKNSWIQFIPSDLEVYGLPLEAHVSRWNFIVEAQNSAGLKARGPLD 269
L T+ E + + SW+QF + +YGLP +HV + + + A + GL A +
Sbjct: 533 KLKLTLKLREQQLVGEKSWVQFNSNSQLMYGLPDSSHVGKHEYFMHATDKGGLSAVDAFE 592
Query: 270 ITVQQHKSGRTINHRFIMQFT-LLKQYNNAIDWQIRALEGIVNLFRDTDMDHLTVLNATQ 328
I V + G RF +F N I +I ++ + F D + +T+ N T+
Sbjct: 593 IHVHRRPQGDRAPARFKAKFVGDPALVLNDIHKKIALVKKLAFAFGDRNCSTITLQNITR 652
Query: 329 TGDLCEFVWTNDTLPKDAACPMDDINRLMKIMESESEPGRGSRLLSRAMSPELGVRGVRW 388
+ E WTN+TLP + CP + I L + + + G+ S A+ P+ +
Sbjct: 653 GSIVVE--WTNNTLPLE-PCPKEQIAGLSRRIAEDD--GKPRPAFSNALEPDFKATSITV 707
Query: 389 EGAGVC------AAPPATRAPDTYPP 408
G+G C P R P PP
Sbjct: 708 TGSGSCRHLQFIPVVPPRRVPSEAPP 733
>BC014616-1|AAH14616.1| 895|Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) protein.
Length = 895
Score = 188 bits (457), Expect = 9e-47
Identities = 117/356 (32%), Positives = 182/356 (51%), Gaps = 17/356 (4%)
Query: 408 PVTRNQVDHITASAGHLLVYKVPEDTFFDPEDGGTRNLILSLRYSDRTEIPAGHWLQFDA 467
P +N +D + A G K+P DTF+D ED T L L+L+ ++ + W+QF++
Sbjct: 497 PELKNHIDRVDAWVGTYFEVKIPSDTFYDHEDTTTDKLKLTLKLREQQLVGEKSWVQFNS 556
Query: 468 NNQEFYGLPTTTDEGSVSYQLIAEDSSKKTAYDSLIVEVVKAPP-IRPTVEFQMTLEYPF 526
N+Q YGLP ++ G Y + A D +A D+ + V + P R F+
Sbjct: 557 NSQLMYGLPDSSHVGKHEYFMHATDKGGLSAVDAFEIHVHRRPQGDRAPARFKAKFVGDP 616
Query: 527 LKLAFNAKNKRKVVEKLANLFGQKETDNIRIQSITNNPTSIIWYNTSLPMDRCPKAEIEQ 586
+ + K +V+KLA FG + I +Q+IT + W N +LP++ CPK +I
Sbjct: 617 ALVLNDIHKKIALVKKLAFAFGDRNCSTITLQNITRGSIVVEWTNNTLPLEPCPKEQIAG 676
Query: 587 LRKMIIVDDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLCAEQNTKVSKVPPALYPG- 645
L + I DD G R + DFK SIT+ G C + VPP P
Sbjct: 677 LSRRIAEDD-----GKPRPAFSNALEPDFKATSITVTGSGSCRHLQF-IPVVPPRRVPSE 730
Query: 646 APNSQ---NSKTGSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLYRRRRTGKMSVGDEE 702
AP ++ S+ + YL T +IPAVV+ ++L+AG+IA + YR++R GK+++ E
Sbjct: 731 APPTEVPDRDPEKSSEDDVYLHT-VIPAVVVAAILLIAGIIAMICYRKKRKGKLTL---E 786
Query: 703 ERQAFRSKGIPVIFQDELEERTDTEPIHKSPVIMREEKPPLLPPA-PDYRSGEDAP 757
++ F KG+P+IF DEL++ + P P+I++EEK PL PP P+ E P
Sbjct: 787 DQATFIKKGVPIIFADELDD-SKPPPSSSMPLILQEEKAPLPPPEYPNQSVPETTP 841
Score = 97.1 bits (231), Expect = 2e-19
Identities = 75/266 (28%), Positives = 115/266 (43%), Gaps = 14/266 (5%)
Query: 152 TEGKSTIIGQTTETVTFAMPVNQPPVLKHHMKKLAITAGKAFRYIIPTDLFMDQEDGSN- 210
T T I TT V NQ P LK+H+ ++ G F IP+D F D ED +
Sbjct: 473 TASPPTRIRTTTSGVPRGGEPNQRPELKNHIDRVDAWVGTYFEVKIPSDTFYDHEDTTTD 532
Query: 211 -LTFTMYEAENVPLSKNSWIQFIPSDLEVYGLPLEAHVSRWNFIVEAQNSAGLKARGPLD 269
L T+ E + + SW+QF + +YGLP +HV + + + A + GL A +
Sbjct: 533 KLKLTLKLREQQLVGEKSWVQFNSNSQLMYGLPDSSHVGKHEYFMHATDKGGLSAVDAFE 592
Query: 270 ITVQQHKSGRTINHRFIMQFT-LLKQYNNAIDWQIRALEGIVNLFRDTDMDHLTVLNATQ 328
I V + G RF +F N I +I ++ + F D + +T+ N T+
Sbjct: 593 IHVHRRPQGDRAPARFKAKFVGDPALVLNDIHKKIALVKKLAFAFGDRNCSTITLQNITR 652
Query: 329 TGDLCEFVWTNDTLPKDAACPMDDINRLMKIMESESEPGRGSRLLSRAMSPELGVRGVRW 388
+ E WTN+TLP + CP + I L + + + G+ S A+ P+ +
Sbjct: 653 GSIVVE--WTNNTLPLE-PCPKEQIAGLSRRIAEDD--GKPRPAFSNALEPDFKATSITV 707
Query: 389 EGAGVC------AAPPATRAPDTYPP 408
G+G C P R P PP
Sbjct: 708 TGSGSCRHLQFIPVVPPRRVPSEAPP 733
>BC012740-1|AAH12740.1| 895|Homo sapiens dystroglycan 1
(dystrophin-associated glycoprotein 1) protein.
Length = 895
Score = 188 bits (457), Expect = 9e-47
Identities = 117/356 (32%), Positives = 182/356 (51%), Gaps = 17/356 (4%)
Query: 408 PVTRNQVDHITASAGHLLVYKVPEDTFFDPEDGGTRNLILSLRYSDRTEIPAGHWLQFDA 467
P +N +D + A G K+P DTF+D ED T L L+L+ ++ + W+QF++
Sbjct: 497 PELKNHIDRVDAWVGTYFEVKIPSDTFYDHEDTTTDKLKLTLKLREQQLVGEKSWVQFNS 556
Query: 468 NNQEFYGLPTTTDEGSVSYQLIAEDSSKKTAYDSLIVEVVKAPP-IRPTVEFQMTLEYPF 526
N+Q YGLP ++ G Y + A D +A D+ + V + P R F+
Sbjct: 557 NSQLMYGLPDSSHVGKHEYFMHATDKGGLSAVDAFEIHVHRRPQGDRAPARFKAKFVGDP 616
Query: 527 LKLAFNAKNKRKVVEKLANLFGQKETDNIRIQSITNNPTSIIWYNTSLPMDRCPKAEIEQ 586
+ + K +V+KLA FG + I +Q+IT + W N +LP++ CPK +I
Sbjct: 617 ALVLNDIHKKIALVKKLAFAFGDRNCSTITLQNITRGSIVVEWTNNTLPLEPCPKEQIAG 676
Query: 587 LRKMIIVDDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLCAEQNTKVSKVPPALYPG- 645
L + I DD G R + DFK SIT+ G C + VPP P
Sbjct: 677 LSRRIAEDD-----GKPRPAFSNALEPDFKATSITVTGSGSCRHLQF-IPVVPPRRVPSE 730
Query: 646 APNSQ---NSKTGSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLYRRRRTGKMSVGDEE 702
AP ++ S+ + YL T +IPAVV+ ++L+AG+IA + YR++R GK+++ E
Sbjct: 731 APPTEVPDRDPEKSSEDDVYLHT-VIPAVVVAAILLIAGIIAMICYRKKRKGKLTL---E 786
Query: 703 ERQAFRSKGIPVIFQDELEERTDTEPIHKSPVIMREEKPPLLPPA-PDYRSGEDAP 757
++ F KG+P+IF DEL++ + P P+I++EEK PL PP P+ E P
Sbjct: 787 DQATFIKKGVPIIFADELDD-SKPPPSSSMPLILQEEKAPLPPPEYPNQSVPETTP 841
Score = 97.1 bits (231), Expect = 2e-19
Identities = 75/266 (28%), Positives = 115/266 (43%), Gaps = 14/266 (5%)
Query: 152 TEGKSTIIGQTTETVTFAMPVNQPPVLKHHMKKLAITAGKAFRYIIPTDLFMDQEDGSN- 210
T T I TT V NQ P LK+H+ ++ G F IP+D F D ED +
Sbjct: 473 TASPPTRIRTTTSGVPRGGEPNQRPELKNHIDRVDAWVGTYFEVKIPSDTFYDHEDTTTD 532
Query: 211 -LTFTMYEAENVPLSKNSWIQFIPSDLEVYGLPLEAHVSRWNFIVEAQNSAGLKARGPLD 269
L T+ E + + SW+QF + +YGLP +HV + + + A + GL A +
Sbjct: 533 KLKLTLKLREQQLVGEKSWVQFNSNSQLMYGLPDSSHVGKHEYFMHATDKGGLSAVDAFE 592
Query: 270 ITVQQHKSGRTINHRFIMQFT-LLKQYNNAIDWQIRALEGIVNLFRDTDMDHLTVLNATQ 328
I V + G RF +F N I +I ++ + F D + +T+ N T+
Sbjct: 593 IHVHRRPQGDRAPARFKAKFVGDPALVLNDIHKKIALVKKLAFAFGDRNCSTITLQNITR 652
Query: 329 TGDLCEFVWTNDTLPKDAACPMDDINRLMKIMESESEPGRGSRLLSRAMSPELGVRGVRW 388
+ E WTN+TLP + CP + I L + + + G+ S A+ P+ +
Sbjct: 653 GSIVVE--WTNNTLPLE-PCPKEQIAGLSRRIAEDD--GKPRPAFSNALEPDFKATSITV 707
Query: 389 EGAGVC------AAPPATRAPDTYPP 408
G+G C P R P PP
Sbjct: 708 TGSGSCRHLQFIPVVPPRRVPSEAPP 733
>AL109804-4|CAC17543.1| 1709|Homo sapiens sialic acid binding Ig-like
lectin 1, sialoadhesin protein.
Length = 1709
Score = 35.9 bits (79), Expect = 0.56
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 671 VVIVCMILLAGVIACVLYRRRRTGKMSVGDEEERQAFRSKGIPVIFQDELEERTDT 726
+++ ++LL G+ AC +RRRR K S+G+ AF+ + +I D T T
Sbjct: 1648 LLVGLLLLLLGLGACYTWRRRRVCKQSMGENSVEMAFQKETTQLIDPDAATCETST 1703
>AK024462-1|BAB15752.1| 977|Homo sapiens FLJ00055 protein protein.
Length = 977
Score = 35.9 bits (79), Expect = 0.56
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 671 VVIVCMILLAGVIACVLYRRRRTGKMSVGDEEERQAFRSKGIPVIFQDELEERTDT 726
+++ ++LL G+ AC +RRRR K S+G+ AF+ + +I D T T
Sbjct: 916 LLVGLLLLLLGLGACYTWRRRRVCKQSMGENSVEMAFQKETTQLIDPDAATCETST 971
>AF230073-1|AAK00757.1| 1709|Homo sapiens sialoadhesin protein.
Length = 1709
Score = 35.9 bits (79), Expect = 0.56
Identities = 18/56 (32%), Positives = 30/56 (53%)
Query: 671 VVIVCMILLAGVIACVLYRRRRTGKMSVGDEEERQAFRSKGIPVIFQDELEERTDT 726
+++ ++LL G+ AC +RRRR K S+G+ AF+ + +I D T T
Sbjct: 1648 LLVGLLLLLLGLGACYTWRRRRVCKQSMGENSVEMAFQKETTQLIDPDAATCETST 1703
>BC130277-1|AAI30278.1| 1444|Homo sapiens phosphoinositide-3-kinase,
class 2, gamma polypeptide protein.
Length = 1444
Score = 34.3 bits (75), Expect = 1.7
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 209 SNLTFTMYEAENVPLSKNSWIQFIPSDLEVYGLPLEAHVSRWNF-IVEAQNSAGLKA 264
S+L+FT+Y A N+P +W+ I LE+ LP E+ ++ F I A N+A L A
Sbjct: 522 SHLSFTVYAAHNIP---ETWVHRINFPLEIKSLPRESMLTVKLFGIACATNNANLLA 575
>AJ000008-1|CAA03853.1| 1448|Homo sapiens PI3-kinase protein.
Length = 1448
Score = 34.3 bits (75), Expect = 1.7
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 4/57 (7%)
Query: 209 SNLTFTMYEAENVPLSKNSWIQFIPSDLEVYGLPLEAHVSRWNF-IVEAQNSAGLKA 264
S+L+FT+Y A N+P +W+ I LE+ LP E+ ++ F I A N+A L A
Sbjct: 523 SHLSFTVYAAHNIP---ETWVHRINFPLEIKSLPRESMLTVKLFGIACATNNANLLA 576
>AF293639-1|AAG33381.1| 715|Homo sapiens dioxin receptor repressor
protein.
Length = 715
Score = 33.5 bits (73), Expect = 3.0
Identities = 29/117 (24%), Positives = 41/117 (35%), Gaps = 2/117 (1%)
Query: 46 VYDHPSSGHDAGHCSGYDACDYAGDYASRXXXXXXXXXXXXXXXCTDNGTDYNRSTRNHY 105
V + S AG S D+C AG + Y +T Y
Sbjct: 83 VQEQSSRQPAAGAPSPGDSCPLAGSAVLEGRLLLESLNGFALVVSAEGTIFYASATIVDY 142
Query: 106 TGGHQTGILERTDSIVVRVSDWLTAIAYLSW-LGPPPWLFRQPESTVTEGKSTIIGQ 161
G HQT ++ + + V D L W + PP +F QP T G I+G+
Sbjct: 143 LGFHQTDVMHQNIYDYIHVDDRQDFCRQLHWAMDPPQVVFGQPPPLET-GDDAILGR 198
>AK124948-1|BAC86004.1| 347|Homo sapiens protein ( Homo sapiens
cDNA FLJ42958 fis, clone BRSTN2010750. ).
Length = 347
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 729 IHKSPVIMREEKPPLLPPAPDYRSGEDAPY 758
+H R+ KPP LPP P RSGE P+
Sbjct: 42 LHLGSTASRQVKPPRLPPPPWGRSGEKLPF 71
>AK124467-1|BAC85857.1| 193|Homo sapiens protein ( Homo sapiens
cDNA FLJ42476 fis, clone BRACE2031389. ).
Length = 193
Score = 33.1 bits (72), Expect = 3.9
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 729 IHKSPVIMREEKPPLLPPAPDYRSGEDAPY 758
+H R+ KPP LPP P RSGE P+
Sbjct: 42 LHLGSTASRQVKPPRLPPPPWGRSGEKLPF 71
>X89013-1|CAA61418.1| 573|Homo sapiens anti-mullerian hormone type
II receptor protein.
Length = 573
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 632 NTKVSKVPPALYPGAPNSQNSKTGSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLYRR 690
N S +PP PG P SQ + +A +S + ++ + ++ ++LL +I +L R+
Sbjct: 117 NANYSHLPPPGSPGTPGSQGPQ--AAPGESIWMALVLLGLFLLLLLLLGSIILALLQRK 173
>U29700-1|AAC50328.1| 573|Homo sapiens anti-mullerian hormone type
II receptor precursor protein.
Length = 573
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 632 NTKVSKVPPALYPGAPNSQNSKTGSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLYRR 690
N S +PP PG P SQ + +A +S + ++ + ++ ++LL +I +L R+
Sbjct: 117 NANYSHLPPPGSPGTPGSQGPQ--AAPGESIWMALVLLGLFLLLLLLLGSIILALLQRK 173
>BC126316-1|AAI26317.1| 573|Homo sapiens anti-Mullerian hormone
receptor, type II protein.
Length = 573
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 632 NTKVSKVPPALYPGAPNSQNSKTGSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLYRR 690
N S +PP PG P SQ + +A +S + ++ + ++ ++LL +I +L R+
Sbjct: 117 NANYSHLPPPGSPGTPGSQGPQ--AAPGESIWMALVLLGLFLLLLLLLGSIILALLQRK 173
>AF283321-1|AAK52433.1| 1611|Homo sapiens low density lipoprotein
receptor-related protein 5 protein.
Length = 1611
Score = 32.7 bits (71), Expect = 5.2
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 286 IMQFTLLKQYNNAIDWQIRALEGI--VNLFRDTDMDHLTVLNATQTGDLCEFVWTNDTLP 343
I FTLL + DWQ R++E + V RD +D L L + ++ + V TN
Sbjct: 548 IFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNPCAD 607
Query: 344 KDAAC 348
++ C
Sbjct: 608 RNGGC 612
>AF172932-1|AAD48497.1| 573|Homo sapiens MIS type II receptor
protein.
Length = 573
Score = 32.7 bits (71), Expect = 5.2
Identities = 16/59 (27%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Query: 632 NTKVSKVPPALYPGAPNSQNSKTGSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLYRR 690
N S +PP PG P SQ + +A +S + ++ + ++ ++LL +I +L R+
Sbjct: 117 NANYSHLPPPGSPGTPGSQGPQ--AAPGESIWMALVLLGLFLLLLLLLGSIILALLQRK 173
>AF077820-1|AAC72791.1| 1615|Homo sapiens LDL receptor member LR3
protein.
Length = 1615
Score = 32.7 bits (71), Expect = 5.2
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 286 IMQFTLLKQYNNAIDWQIRALEGI--VNLFRDTDMDHLTVLNATQTGDLCEFVWTNDTLP 343
I FTLL + DWQ R++E + V RD +D L L + ++ + V TN
Sbjct: 548 IFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNPCAD 607
Query: 344 KDAAC 348
++ C
Sbjct: 608 RNGGC 612
>AF064548-1|AAC36467.1| 1615|Homo sapiens low-density lipoprotein
receptor-related protein 5 protein.
Length = 1615
Score = 32.7 bits (71), Expect = 5.2
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 286 IMQFTLLKQYNNAIDWQIRALEGI--VNLFRDTDMDHLTVLNATQTGDLCEFVWTNDTLP 343
I FTLL + DWQ R++E + V RD +D L L + ++ + V TN
Sbjct: 548 IFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNPCAD 607
Query: 344 KDAAC 348
++ C
Sbjct: 608 RNGGC 612
>AB017498-1|BAA33051.1| 1615|Homo sapiens Lipoprotein Receptor
Related Protein 5 protein.
Length = 1615
Score = 32.7 bits (71), Expect = 5.2
Identities = 20/65 (30%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 286 IMQFTLLKQYNNAIDWQIRALEGI--VNLFRDTDMDHLTVLNATQTGDLCEFVWTNDTLP 343
I FTLL + DWQ R++E + V RD +D L L + ++ + V TN
Sbjct: 548 IFGFTLLGDFIYWTDWQRRSIERVHKVKASRDVIIDQLPDLMGLKAVNVAKVVGTNPCAD 607
Query: 344 KDAAC 348
++ C
Sbjct: 608 RNGGC 612
Database: human
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 73,234,838
Number of sequences in database: 224,733
Lambda K H
0.318 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,691,230
Number of Sequences: 224733
Number of extensions: 5152420
Number of successful extensions: 15004
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 14967
Number of HSP's gapped (non-prelim): 30
length of query: 788
length of database: 73,234,838
effective HSP length: 96
effective length of query: 692
effective length of database: 51,660,470
effective search space: 35749045240
effective search space used: 35749045240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 69 (31.9 bits)
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