Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001935-TA|BGIBMGA001935-PA|IPR006644|Dystroglycan-type
cadherin-like, IPR008465|Dystroglycan
(788 letters)
Database: bee
429 sequences; 140,377 total letters
Searching.....................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholi... 27 0.78
DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholi... 25 2.4
DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholi... 25 2.4
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 25 3.2
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 24 5.5
DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein. 23 7.3
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 23 9.6
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 23 9.6
>DQ026032-1|AAY87891.1| 566|Apis mellifera nicotinic acetylcholine
receptor alpha3subunit protein.
Length = 566
Score = 26.6 bits (56), Expect = 0.78
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 499 YDSLIVEVVKAPPIRPTVEFQMTLEYPFLKLAFNAKNKRKVVEKLANL 546
Y S+ ++++ P +R +F + P+L + FN +RK + NL
Sbjct: 201 YTSVEWDILEVPAVR-NEKFYTCCDEPYLDITFNITMRRKTLFYTVNL 247
>DQ026034-1|AAY87893.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.0 bits (52), Expect = 2.4
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 499 YDSLIVEVVKAPPIRPTVEFQMTLEYPFLKLAFNAKNKRKVVEKLANL 546
Y S+ ++++ P +R +F + P+L + FN +RK + N+
Sbjct: 205 YMSVEWDILEVPAVR-NEKFYTCCDEPYLDITFNITMRRKTLFYTVNI 251
>DQ026033-1|AAY87892.1| 569|Apis mellifera nicotinic acetylcholine
receptor alpha4subunit protein.
Length = 569
Score = 25.0 bits (52), Expect = 2.4
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 499 YDSLIVEVVKAPPIRPTVEFQMTLEYPFLKLAFNAKNKRKVVEKLANL 546
Y S+ ++++ P +R +F + P+L + FN +RK + N+
Sbjct: 205 YMSVEWDILEVPAVR-NEKFYTCCDEPYLDITFNITMRRKTLFYTVNI 251
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 24.6 bits (51), Expect = 3.2
Identities = 23/92 (25%), Positives = 38/92 (41%), Gaps = 8/92 (8%)
Query: 181 HMKKLAITAGKAFRYIIPTDLFMDQEDGSNLTFTMYEAENVPLSKNSWIQFIPSDLEVYG 240
HM K AI AG+ R P G + ++E + L N + P+ +
Sbjct: 496 HMDKKAIVAGETLRVTCPV-------AGYPIESIVWERDTRVLPINRKQKVFPNGTLIIE 548
Query: 241 LPLEAHVSRWNFIVEAQNSAGLKARGPLDITV 272
+E + + A+N+ G ARG L++ V
Sbjct: 549 -NVERMSDQATYTCVARNAQGYSARGTLEVQV 579
Score = 24.2 bits (50), Expect = 4.2
Identities = 7/24 (29%), Positives = 16/24 (66%)
Query: 664 VTFIIPAVVIVCMILLAGVIACVL 687
+ ++P V + +I++A ++ CVL
Sbjct: 1585 LNLVVPVVAAILVIIVAVIVICVL 1608
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 23.8 bits (49), Expect = 5.5
Identities = 17/59 (28%), Positives = 25/59 (42%)
Query: 446 ILSLRYSDRTEIPAGHWLQFDANNQEFYGLPTTTDEGSVSYQLIAEDSSKKTAYDSLIV 504
IL Y++ TE H ++ +GL TTD S + L S T Y +L +
Sbjct: 197 ILDDMYNNNTEWEIVHMSHSESTIDSKFGLGFTTDLLSYNILLRRHYSMNSTTYVTLTI 255
>DQ342041-1|ABC69933.1| 828|Apis mellifera STIP protein.
Length = 828
Score = 23.4 bits (48), Expect = 7.3
Identities = 22/127 (17%), Positives = 61/127 (48%), Gaps = 4/127 (3%)
Query: 505 EVVKAPPIRPTVEFQMTLEYPFLKLAFNAKNKRKVVEKLANLFG--QKETDNIRI--QSI 560
+V++ ++P + +++ E +K+ +++++ + G Q+ +N+ +S
Sbjct: 252 QVLEDGKLKPNKKVRISNEMSKVKVIDMTGPEQRILSGYHAIAGGQQRPDENVVTDKKSK 311
Query: 561 TNNPTSIIWYNTSLPMDRCPKAEIEQLRKMIIVDDRGSRGGALRENVDQVFDKDFKVMSI 620
N + +N ++ +D C + I+ R+ + DR A ++N+ +V D+ +++
Sbjct: 312 VNFALPELQHNLNILVDMCEQDIIQNDRRTRHLSDRVVALEAEKKNLSKVIDQHSQLIDT 371
Query: 621 TLNPLGL 627
N L +
Sbjct: 372 LENVLAI 378
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 667 IIPAVVIVCMILLAGVIACVLYRRRRT 693
I PAV+ I+ +AC+L+ R T
Sbjct: 517 IAPAVISCLGIVATMAVACLLFHHRDT 543
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.0 bits (47), Expect = 9.6
Identities = 10/27 (37%), Positives = 15/27 (55%)
Query: 667 IIPAVVIVCMILLAGVIACVLYRRRRT 693
I PAV+ I+ +AC+L+ R T
Sbjct: 607 IAPAVISCLGIVATMAVACLLFHHRDT 633
Database: bee
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 140,377
Number of sequences in database: 429
Lambda K H
0.318 0.134 0.404
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 227,537
Number of Sequences: 429
Number of extensions: 10084
Number of successful extensions: 31
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 22
Number of HSP's gapped (non-prelim): 11
length of query: 788
length of database: 140,377
effective HSP length: 63
effective length of query: 725
effective length of database: 113,350
effective search space: 82178750
effective search space used: 82178750
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
S2: 47 (23.0 bits)
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