Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001934-TA|BGIBMGA001934-PA|IPR008465|Dystroglycan
(318 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_UPI0000DB700C Cluster: PREDICTED: hypothetical protein;... 118 2e-25
UniRef50_UPI0000D56846 Cluster: PREDICTED: similar to CG18250-PA... 114 3e-24
UniRef50_UPI00015B4D65 Cluster: PREDICTED: similar to ENSANGP000... 94 4e-18
UniRef50_UPI00005843F2 Cluster: PREDICTED: similar to Dag1 prote... 83 1e-14
UniRef50_Q14118 Cluster: Dystroglycan precursor (Dystrophin-asso... 65 3e-09
UniRef50_Q8JHU7 Cluster: Dystroglycan; n=9; Euteleostomi|Rep: Dy... 63 8e-09
UniRef50_UPI0000ECD252 Cluster: UPI0000ECD252 related cluster; n... 45 0.002
UniRef50_Q8PKH6 Cluster: Hemolysin-type calcium binding protein;... 44 0.007
UniRef50_Q7PQ19 Cluster: ENSANGP00000015605; n=1; Anopheles gamb... 38 0.26
UniRef50_Q8YL10 Cluster: All7128 protein; n=1; Nostoc sp. PCC 71... 37 0.79
UniRef50_Q2SPA9 Cluster: RTX toxins and related Ca2+-binding pro... 36 1.8
UniRef50_A0L4Q4 Cluster: Cadherin; n=1; Magnetococcus sp. MC-1|R... 35 2.4
UniRef50_A0KRJ3 Cluster: Ig family protein; n=4; Shewanella|Rep:... 35 2.4
UniRef50_A5WE78 Cluster: 2-isopropylmalate synthase; n=10; Gamma... 34 4.2
UniRef50_Q8EKA6 Cluster: Fibronectin type III domain protein; n=... 34 5.6
UniRef50_Q2HDU4 Cluster: Cytochrome P450 52; n=5; Pezizomycotina... 33 7.3
UniRef50_A2QUZ0 Cluster: Catalytic activity: cellobiose + O(2) =... 33 7.3
UniRef50_A1DL39 Cluster: Putative uncharacterized protein; n=1; ... 33 7.3
UniRef50_Q3J8W4 Cluster: Fimbrial assembly protein precursor; n=... 33 9.7
UniRef50_Q2SHR7 Cluster: Putative uncharacterized protein; n=1; ... 33 9.7
UniRef50_A4CFZ7 Cluster: Fibronectin type III domain protein; n=... 33 9.7
UniRef50_A4C3J8 Cluster: Fibronectin type III domain protein; n=... 33 9.7
>UniRef50_UPI0000DB700C Cluster: PREDICTED: hypothetical protein;
n=1; Apis mellifera|Rep: PREDICTED: hypothetical protein
- Apis mellifera
Length = 532
Score = 118 bits (285), Expect = 2e-25
Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 7/237 (2%)
Query: 44 EIAKNGLRRLWGVPDTLAYVGHLFRMEIPKEAFSGKVVAYKVRSDHGRRTPNWLAVDSRH 103
E+ ++ + VP + VGH+ ++ + KEAF+G Y++ G + WL D
Sbjct: 65 EVKRHQFDEVNNVPHVVVPVGHVLKLRVHKEAFTGPEDYYELFDSSGNKLLRWLYWDDAA 124
Query: 104 GLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEV--KKGEDKPHSKYGT-CIGDEN 160
+ G+P +D+ T D F ++V +K E+ H T C E
Sbjct: 125 STLMGVPTKKDVGSRRLSVKVVPKDDVATTKDLFVVQVVPEKHEELKHRDGKTHCNEGEE 184
Query: 161 RLVLLILVDGAFHKIVPRQRIRALMQLANFMALDGDEFWMEPY--KTETHPDT--ILSGI 216
+ +L IL+D F + P R+ + LA F+ L F M P K + D+ ILSG
Sbjct: 185 QTLLTILLDAKFDNLTPVTRVNTIENLAGFLGLHVSAFSMHPQNAKENFNADSTVILSGP 244
Query: 217 GSSLRKRGDATTAIYLNVGCGNKLWDRHKVLVAGLREQSRDGTLEQLLRLPVIGWRL 273
G+ ++ TA+ VGC LW LV LREQ++DGTL ++++LPV+ WR+
Sbjct: 245 GNVKHRKEKHLTAVQWQVGCDGHLWRHQTDLVKHLREQAKDGTLAEVMQLPVLLWRV 301
>UniRef50_UPI0000D56846 Cluster: PREDICTED: similar to CG18250-PA,
isoform A; n=2; Endopterygota|Rep: PREDICTED: similar to
CG18250-PA, isoform A - Tribolium castaneum
Length = 1114
Score = 114 bits (274), Expect = 3e-24
Identities = 77/266 (28%), Positives = 130/266 (48%), Gaps = 31/266 (11%)
Query: 23 DDDFAFDNSEEFQVELTANHSEIAKNGLRRLWGVPDTLAYVGHLFRMEIPKEAFSGKVVA 82
++DFAFD S++F+VE+ A + EI A VG +F +P+ A +G
Sbjct: 20 EEDFAFDVSDDFEVEVNAGNREIE--------------AAVGKVFHYVVPQVAATG---G 62
Query: 83 YKVRSDHGRRTPNWLAVDSRHGLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEVK 142
++ R G P+WL D + G+P D+ + ++ TI V+
Sbjct: 63 FEARRSDGSPLPSWLLFDKIGAVFWGVPLGDDVGSLHLVI------RNRNISEDVTINVR 116
Query: 143 KGEDKPHSKYGTCIGDENRLVLLILVDGAFHKIVPRQRIRALMQLANFMALDGDEFWMEP 202
+ D C E+ VL++L+D I P+QR+ A+ +A F L F ++P
Sbjct: 117 ETSDLKDR----CPSTEDNTVLILLIDKGVRAIKPKQRVIAVNNVAKFFGLPYSAFTLKP 172
Query: 203 YKTE---THPDTILSGIGSSLRKRGDATTAIYLNVGCGNKLWDRHKVLVAGLREQSRDGT 259
+ T +L+G G+ + + +T++ + VGC +LW + LV L++Q+RDGT
Sbjct: 173 QLEKDDITDSSVVLAGPGN-FKPKSAKSTSVKVAVGCDGRLWVQTAPLVHQLKQQARDGT 231
Query: 260 LEQLLRLPVIGWRLLAVKPTFRVKRQ 285
+ ++L LP+IGWR+ + R KRQ
Sbjct: 232 ISEVLGLPLIGWRVKTEPKSSRTKRQ 257
>UniRef50_UPI00015B4D65 Cluster: PREDICTED: similar to
ENSANGP00000015605; n=1; Nasonia vitripennis|Rep:
PREDICTED: similar to ENSANGP00000015605 - Nasonia
vitripennis
Length = 1315
Score = 94.3 bits (224), Expect = 4e-18
Identities = 58/186 (31%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 30 NSEEFQVELTANHSEIAKNGLRRLWGVPDTLAYVGHLFRMEIPKEAFSGKVVAYKVRSDH 89
+ E+ Q AN + +L G+PD +A VGH+F++ +PK+AF+G + Y+ R +
Sbjct: 44 SKEQQQQHTPANAKPKKSQRVEKLLGMPDAIANVGHVFKLHVPKQAFAGNIDYYEARGSN 103
Query: 90 GRRTPNWLAVDSRHGLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEV--KKGEDK 147
G+ P+WL D + G+P +D+ G A D F I V +K E
Sbjct: 104 GKGLPHWLRWDEPASALYGVPARKDV-GRHRVSVKAFGKHGDVAQDWFIIHVVPEKREHY 162
Query: 148 PHSK-YGTCIGDENRLVLLILVDGAFHKIVPRQRIRALMQLANFMAL-----DGDEFWME 201
H C D++R +L IL+D + + P ++RAL LA F L DG FW
Sbjct: 163 SHKDGKKRCTEDQDRTMLTILIDARYENLKPSAKVRALENLAGFFGLHPVGCDG-HFW-- 219
Query: 202 PYKTET 207
P++ +T
Sbjct: 220 PHQIDT 225
Score = 42.7 bits (96), Expect = 0.012
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 234 VGCGNKLWDRHKVLVAGLREQSRDGTLEQLLRLPVIGWRLLAVKPTFRVKRQ 285
VGC W + + EQ+RDGTL +++ LPV WR+ A F R+
Sbjct: 212 VGCDGHFWPHQIDTIKQIPEQARDGTLSEVMELPVYQWRVRADSTDFARNRR 263
Score = 34.7 bits (76), Expect = 3.2
Identities = 28/97 (28%), Positives = 41/97 (42%), Gaps = 9/97 (9%)
Query: 61 AYVGHLFRMEIPKEAF-------SGKVVAYKVRSDHGR-RTPNWLAVDSRHGLISGIPQY 112
A VG LF ++PK+ F +G + A + ++ +WL DS + G+P
Sbjct: 941 ATVGQLFVYKVPKDTFFDEEDGDTGSMKATLLTANRSEIPASDWLQFDSSNQEFYGVPLQ 1000
Query: 113 QDIXXXXXXXXXXXXXKGLTATDSFTIEVKKGEDKPH 149
QDI +GL ATDS EV + H
Sbjct: 1001 QDI-GRKTYQLVVKDREGLEATDSLVAEVHPSPNMRH 1036
>UniRef50_UPI00005843F2 Cluster: PREDICTED: similar to Dag1 protein;
n=1; Strongylocentrotus purpuratus|Rep: PREDICTED:
similar to Dag1 protein - Strongylocentrotus purpuratus
Length = 869
Score = 82.6 bits (195), Expect = 1e-14
Identities = 66/254 (25%), Positives = 113/254 (44%), Gaps = 22/254 (8%)
Query: 54 WGVPDTLAYVGHLFRMEIPKEAFSGKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQ 113
WG+PDT A VG F +IPKEAF G V Y ++ + P+WL ++ + GIP +
Sbjct: 48 WGIPDTTATVGVAFSHKIPKEAFRGDVDKYMLKEVGAQSLPSWLNFSNKTNTLQGIPGKE 107
Query: 114 DIXXXXXXXXXXXXXKGLTATDSFTIEVKK----GEDKPHSK------------YGTCIG 157
D LT S T +V +D PH+K C
Sbjct: 108 DQRQYYISVTALGKVSNLTKDSSNTKDVFSINVLPQDTPHTKSTDESTSKHKDGVVVCPP 167
Query: 158 DENRLVLLILVDGAFHKIVPRQRIRALMQLANFMALDGDEFWMEPYKTETHP-DTILSGI 216
++ + I++D + + P++RI + +L+ + + F + P K + + +G
Sbjct: 168 EKPAVRATIILDADWSLLTPQERINMVSKLSKYSRIPMTAFKLLPEKDDNKGYQALAAGS 227
Query: 217 GSSLRKRGDATTAIYLNVGCGNKLWDRHKVLVAGLREQSRDGTLEQLLRLPVIGWRLLAV 276
G+ + + + ++ VGCG + D+ V V L S+DG++ + L + GW + +
Sbjct: 228 GNIATAKHEGLSLSWV-VGCGRNI-DQLPV-VTILEGASKDGSMAEKLNYDIKGWYVSSN 284
Query: 277 KPTF--RVKRQVTL 288
P RV+RQ L
Sbjct: 285 TPIIKNRVRRQAPL 298
>UniRef50_Q14118 Cluster: Dystroglycan precursor
(Dystrophin-associated glycoprotein 1) [Contains:
Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-
DG)]; n=29; Tetrapoda|Rep: Dystroglycan precursor
(Dystrophin-associated glycoprotein 1) [Contains:
Alpha-dystroglycan (Alpha-DG); Beta-dystroglycan (Beta-
DG)] - Homo sapiens (Human)
Length = 895
Score = 64.9 bits (151), Expect = 3e-09
Identities = 66/262 (25%), Positives = 105/262 (40%), Gaps = 29/262 (11%)
Query: 55 GVPDTLAYVGHLFRMEIPKEAFSGKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQD 114
G+PD A VG FR+ IP + + KV + P+WL DS+ + G+P D
Sbjct: 66 GIPDGTAVVGRSFRVTIPTDLIASSGDIIKVSAAGKEALPSWLHWDSQSHTLEGLPLDTD 125
Query: 115 IXXXXXXXXXXXXXKG---LTATDS-FTIEVKKGEDKPHSKYGT------------CIGD 158
+ T S F+IEV + T C D
Sbjct: 126 KGVHYISVSATRLGANGSHIPQTSSVFSIEVYPEDHSDLQSVRTASPDPGEVVSSACAAD 185
Query: 159 ENRLVLLILVDGAFHKIVPRQRIRALMQLANFMALDGDEFWMEPYKTETHPD--TILSGI 216
E VL +++D K+ P+QRI L ++ +F ++ + P D ++G
Sbjct: 186 EPVTVLTVILDADLTKMTPKQRIDLLHRMRSFSEVELHNMKLVPVVNNRLFDMSAFMAGP 245
Query: 217 GSSLRKRGDATTAIYLNVGCG---NKLWDRHKVLVAGLREQSRDGTLEQLLRLPVIGWRL 273
G+ +K + + +GC N + D H G+ +R+G + L PV+GW +
Sbjct: 246 GNP-KKVVENGALLSWKLGCSLNQNSVPDIH-----GVEAPAREGAMSAQLGYPVVGWHI 299
Query: 274 LAVKPTF--RVKRQVTLTRVKV 293
KP RV+RQ+ T V
Sbjct: 300 ANKKPPLPKRVRRQIHATPTPV 321
>UniRef50_Q8JHU7 Cluster: Dystroglycan; n=9; Euteleostomi|Rep:
Dystroglycan - Danio rerio (Zebrafish) (Brachydanio
rerio)
Length = 866
Score = 63.3 bits (147), Expect = 8e-09
Identities = 62/255 (24%), Positives = 110/255 (43%), Gaps = 26/255 (10%)
Query: 55 GVPDTLAYVGHLFRMEIP-KEAFSGKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQ 113
G PD+ A VG +FR+++P K SG +V K+ P WL D+ G + G+P
Sbjct: 79 GFPDSSAVVGRVFRLQVPIKAKDSGSIV--KITEASKDVLPAWLHWDAESGTLQGLPLET 136
Query: 114 DIXXXXXXXXXXXXXKGLTATDSFTIEV---KKGEDKP-----------HSKYGTCIGDE 159
D K + D F+IEV + E P ++ C +E
Sbjct: 137 DKGVHYISVSVSNESKVSQSPDVFSIEVHPEEHAETDPFQLAIQQSASNDAQPFICGNEE 196
Query: 160 NRLVLLILVDGAFHKIVPRQRIRALMQLANFMALDGDEFWMEPYKTETHPD--TILSGIG 217
VL +++D K+ +QR+ L ++ F + + P D ++G G
Sbjct: 197 PVTVLTVILDADLTKMSSKQRVELLAKMKKFSGMGLQHMKILPVVNNRLFDMSAFMAGPG 256
Query: 218 SSLRKRGDATTAIYLNVGCGNKLWDRHKVL-VAGLREQSRDGTLEQLLRLPVIGWRLLAV 276
++ +K + + +GC D+ + ++ ++ +++GT+ L PV+GW +
Sbjct: 257 NA-KKVVENGALLSWKLGCS---LDQSSIPDISSVQVPAKEGTMSAQLGYPVVGWHIANK 312
Query: 277 KPTF--RVKRQVTLT 289
KP RV+RQ+ T
Sbjct: 313 KPHVPKRVRRQLNNT 327
>UniRef50_UPI0000ECD252 Cluster: UPI0000ECD252 related cluster; n=1;
Gallus gallus|Rep: UPI0000ECD252 UniRef100 entry -
Gallus gallus
Length = 634
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/58 (32%), Positives = 28/58 (48%)
Query: 53 LWGVPDTLAYVGHLFRMEIPKEAFSGKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIP 110
L G+PD VG +F +P F G + YKV G P+WL + ++ G+P
Sbjct: 9 LKGIPDATVLVGKIFCYPVPVFTFQGTITQYKVTLASGANLPSWLDFNPNTNMLQGLP 66
>UniRef50_Q8PKH6 Cluster: Hemolysin-type calcium binding protein; n=1;
Xanthomonas axonopodis pv. citri|Rep: Hemolysin-type
calcium binding protein - Xanthomonas axonopodis pv.
citri
Length = 2183
Score = 43.6 bits (98), Expect = 0.007
Identities = 32/121 (26%), Positives = 46/121 (38%), Gaps = 7/121 (5%)
Query: 58 DTLAYVGHLFRMEIPKEAF----SGKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQ 113
D A G F +P EAF +G + Y+ G P+WL D+ SG P
Sbjct: 1646 DARASTGAAFSFTVPVEAFKDEDAGDTLTYRATRADGSALPSWLGFDAATRTFSGTPAQG 1705
Query: 114 DIXXXXXXXXXXXXXKGLTATDSFTIEVKKGEDKPHSK--YGTCIGDENRLVLLILVDGA 171
D+ G +D+F++ V KG P ++ GT E + DG
Sbjct: 1706 DVGAIDVQVTATDGL-GAAVSDTFSLVVDKGNRAPVAEGWIGTQYFTEQTAFRFTVPDGL 1764
Query: 172 F 172
F
Sbjct: 1765 F 1765
>UniRef50_Q7PQ19 Cluster: ENSANGP00000015605; n=1; Anopheles gambiae
str. PEST|Rep: ENSANGP00000015605 - Anopheles gambiae
str. PEST
Length = 753
Score = 38.3 bits (85), Expect = 0.26
Identities = 28/96 (29%), Positives = 43/96 (44%), Gaps = 7/96 (7%)
Query: 61 AYVGHLFRMEIPKEAF----SGKVVAYKV-RSDHGRRTPN-WLAVDSRHGLISGIPQYQD 114
A VGHL ++P + F G + K+ +D PN WL DS++ G+P+ D
Sbjct: 389 ATVGHLLVFKVPVDTFYDPEDGNELKMKLLTTDRNTLDPNHWLQFDSKNQEFYGVPRTND 448
Query: 115 IXXXXXXXXXXXXXKGLTATDSFTIEVKKGEDKPHS 150
I +GLTATD+ + V + +S
Sbjct: 449 I-GRKEYLLMAEDREGLTATDALVVVVNPHHKRDYS 483
>UniRef50_Q8YL10 Cluster: All7128 protein; n=1; Nostoc sp. PCC
7120|Rep: All7128 protein - Anabaena sp. (strain PCC
7120)
Length = 3083
Score = 36.7 bits (81), Expect = 0.79
Identities = 21/86 (24%), Positives = 36/86 (41%), Gaps = 5/86 (5%)
Query: 67 FRMEIPKEAFS----GKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQDIXXXXXXX 122
F +IP +AF+ G + Y ++G P+WL D+ SG P ++
Sbjct: 2492 FNFQIPADAFNDVDTGDTLTYTATLENGDELPSWLTFDAATRTFSGTPTNSEVDTLSIKV 2551
Query: 123 XXXXXXKGLTATDSFTIEVKKGEDKP 148
+ +A++ FT+ V D P
Sbjct: 2552 IATDKSQA-SASNVFTLTVLNTNDAP 2576
>UniRef50_Q2SPA9 Cluster: RTX toxins and related Ca2+-binding protein;
n=2; Hahella chejuensis KCTC 2396|Rep: RTX toxins and
related Ca2+-binding protein - Hahella chejuensis (strain
KCTC 2396)
Length = 2408
Score = 35.5 bits (78), Expect = 1.8
Identities = 29/110 (26%), Positives = 41/110 (37%), Gaps = 9/110 (8%)
Query: 58 DTLAYVGHLFRMEIPKEAFS----GKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQ 113
+ LA G P E FS G + Y G P+WL+ D+ SGI +
Sbjct: 2048 NVLAKTGETLNFTAPAETFSDPDVGDALTYAATLADGSPLPDWLSFDAETLTFSGIVGNE 2107
Query: 114 DIXXXXXXXXXXXXXKGLTATDSFTIEVKKGE--DKPHSKYGTCIGDENR 161
+ G A++SFT+ V GE S + + D NR
Sbjct: 2108 GVYNVMLTATDRA---GARASESFTLNVSPGEAPSPGSSSHEFSLPDNNR 2154
>UniRef50_A0L4Q4 Cluster: Cadherin; n=1; Magnetococcus sp. MC-1|Rep:
Cadherin - Magnetococcus sp. (strain MC-1)
Length = 1323
Score = 35.1 bits (77), Expect = 2.4
Identities = 27/79 (34%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 38 LTANHSEIAKNGLRRLWGVPDTLA--YVGHLFRMEIPKEAFS----GKVVAYKVRSDHGR 91
+TA+ A GL L P+ LA V + R+ +P +AF+ VV +G+
Sbjct: 1175 VTASQGGPAVEGLIALH--PEILAPDMVDDVVRVSLPADAFAHTRTDAVVVLTAARINGQ 1232
Query: 92 RTPNWLAVDSRHGLISGIP 110
P+WL DSR G +SG P
Sbjct: 1233 PLPSWLNFDSRSGTLSGSP 1251
>UniRef50_A0KRJ3 Cluster: Ig family protein; n=4; Shewanella|Rep: Ig
family protein - Shewanella sp. (strain ANA-3)
Length = 3544
Score = 35.1 bits (77), Expect = 2.4
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Query: 94 PNWLAVDSRHGLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEVKKGEDKPHSKYG 153
P+WL+ + G++SG P ++ GLTA SFTI V D P +
Sbjct: 2409 PSWLSFNVATGVLSGTPSNANVGSHAVLLRATDVD-GLTADQSFTIVVANVNDAPIATNQ 2467
Query: 154 TCIGDENRLVLLIL 167
T +E+ +++ L
Sbjct: 2468 TVTLEEDSSLMITL 2481
Score = 33.9 bits (74), Expect = 5.6
Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 1/55 (1%)
Query: 94 PNWLAVDSRHGLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEVKKGEDKP 148
P+WL+ ++ G++SG P ++ GLTA SFTI V D P
Sbjct: 1765 PSWLSFNAATGVLSGTPTNANV-GSHAVLLRATDVDGLTADQSFTIVVANVNDAP 1818
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 94 PNWLAVDSRHGLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEVKKGEDKP 148
P+WL ++ G++SG P ++ GLTA SFTI V D P
Sbjct: 1213 PSWLNFNAATGVLSGTPSNANVGSHAVLLRATDVD-GLTADQSFTIVVANVNDAP 1266
>UniRef50_A5WE78 Cluster: 2-isopropylmalate synthase; n=10;
Gammaproteobacteria|Rep: 2-isopropylmalate synthase -
Psychrobacter sp. PRwf-1
Length = 586
Score = 34.3 bits (75), Expect = 4.2
Identities = 19/78 (24%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 27 AFDNSEEFQVELTANHSEIAKNGLRRLWGV---PDTLAYVGHLFRMEIPKEAFSGKV-VA 82
AF S + ++ + +++E + + +W V P A++G ++ + + SGK VA
Sbjct: 352 AFSGSHQDAIKKSLDYNEKNSDATQNIWDVAYLPIDPAHIGRSYQDVVRINSQSGKGGVA 411
Query: 83 YKVRSDHGRRTPNWLAVD 100
Y ++ ++G P W+ +D
Sbjct: 412 YILQRNYGFNLPRWMQID 429
>UniRef50_Q8EKA6 Cluster: Fibronectin type III domain protein; n=4;
Shewanella|Rep: Fibronectin type III domain protein -
Shewanella oneidensis
Length = 2522
Score = 33.9 bits (74), Expect = 5.6
Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)
Query: 94 PNWLAVDSRHGLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEVKKGEDKPHSKYG 153
P+WL ++ G++SG P ++ GLTA SFTI V D P +
Sbjct: 1387 PSWLNFNAGTGVLSGTPSNANVGSHAVVLRATDVD-GLTAEQSFTIVVANVNDAPVATNQ 1445
Query: 154 TCIGDENRLVLLILV 168
+E+ ++ LV
Sbjct: 1446 VVTLEEDSSAMITLV 1460
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)
Query: 94 PNWLAVDSRHGLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEVKKGEDKP 148
P+WL+ ++ G++SG P + GLTA SFTI V D P
Sbjct: 1111 PSWLSFNAGTGVLSGTPSNASVGSHAVVLRVTDVD-GLTAEQSFTIVVANVNDAP 1164
>UniRef50_Q2HDU4 Cluster: Cytochrome P450 52; n=5;
Pezizomycotina|Rep: Cytochrome P450 52 - Chaetomium
globosum (Soil fungus)
Length = 541
Score = 33.5 bits (73), Expect = 7.3
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 132 TATDSFTIEVKKGEDKPHSKYGTCIGDENRLVLLILVDGAFHKIVPRQRIRALMQLAN 189
+ATD K PH ++ G+ R+ +I GA +K+VPR M++ N
Sbjct: 217 SATDFLLGHDLKSLSNPHQEFAEAFGEVQRVQGIIARSGALNKLVPRASFNKNMEVIN 274
>UniRef50_A2QUZ0 Cluster: Catalytic activity: cellobiose + O(2) =
cellobiono-1 precursor; n=3; Aspergillus|Rep: Catalytic
activity: cellobiose + O(2) = cellobiono-1 precursor -
Aspergillus niger
Length = 901
Score = 33.5 bits (73), Expect = 7.3
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 4/62 (6%)
Query: 131 LTATDSFTIEVKKGEDKPHSKYGTCIGDENRLVL----LILVDGAFHKIVPRQRIRALMQ 186
LTA D + K G D GT + D N V L +VDG+ H +P +A++Q
Sbjct: 661 LTAGDHYVGTAKMGVDDGRESNGTSVVDLNTKVYGTENLYIVDGSIHPDLPTGNSQAIIQ 720
Query: 187 LA 188
+A
Sbjct: 721 IA 722
>UniRef50_A1DL39 Cluster: Putative uncharacterized protein; n=1;
Neosartorya fischeri NRRL 181|Rep: Putative
uncharacterized protein - Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / NRRL 181)(Aspergillus fischerianus
(strain ATCC 1020 / DSM 3700 / NRRL 181))
Length = 1492
Score = 33.5 bits (73), Expect = 7.3
Identities = 17/79 (21%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 158 DENRLVLLILVDGAFHKIVPRQRIRALMQLANFMALDGDEFWMEPYKTETHPDTILSGIG 217
++ R +LI++DG + +P+ R + ++ N + D D++W + T+ + D ++ +
Sbjct: 1257 NDGRGCVLIIIDGTLNAGIPKGRAES--RIYNTTSFDRDDYWAQEQYTQQNADKQIAHMK 1314
Query: 218 SSLRKRGDATTAIYLNVGC 236
S R G + + C
Sbjct: 1315 SIARDGGTGDSYYIMQWQC 1333
>UniRef50_Q3J8W4 Cluster: Fimbrial assembly protein precursor; n=1;
Nitrosococcus oceani ATCC 19707|Rep: Fimbrial assembly
protein precursor - Nitrosococcus oceani (strain ATCC
19707 / NCIMB 11848)
Length = 1470
Score = 33.1 bits (72), Expect = 9.7
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 6/89 (6%)
Query: 23 DDDFAFDNSEEFQVELTANHSEI----AKNGLRRLWGVPDTLAYVGHLFRMEIPKEAFSG 78
D+ F+ N+ + + +LT EI + N L L +++ HL++ A++G
Sbjct: 759 DNYFSVTNALQLETQLTKAFEEIIEETSSNSLVALNS--GSISTNSHLYQARFSSGAWTG 816
Query: 79 KVVAYKVRSDHGRRTPNWLAVDSRHGLIS 107
+V+ + + SD NW A D G+ S
Sbjct: 817 QVLDFPINSDGSLGAKNWEAADLLDGVSS 845
>UniRef50_Q2SHR7 Cluster: Putative uncharacterized protein; n=1;
Hahella chejuensis KCTC 2396|Rep: Putative
uncharacterized protein - Hahella chejuensis (strain
KCTC 2396)
Length = 1031
Score = 33.1 bits (72), Expect = 9.7
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 6/113 (5%)
Query: 29 DNSEEFQVELTANHSEIAKNGLRRLWGVPDTLAYVGHLFRMEIPKEAFSGKVVAYKVRSD 88
+NS++ + + S+ N + G PD A G F G +++++ +
Sbjct: 47 NNSDDTGTDSGDDSSDTGDNQAPTISGTPDPAAKEGEPFSFTPTVSDAEGDTLSFQLVNG 106
Query: 89 HGRRTPNWLAVDSRHGLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEV 141
P WL++D+ G ISG P D+ K TA F +EV
Sbjct: 107 -----PAWLSIDAATGKISGSPDADDLGMAKGIVIRVSDGK-KTADLQFDLEV 153
>UniRef50_A4CFZ7 Cluster: Fibronectin type III domain protein; n=2;
Alteromonadales|Rep: Fibronectin type III domain protein
- Pseudoalteromonas tunicata D2
Length = 609
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 94 PNWLAVDSRHGLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEVKKGEDKPHSKYG 153
PNW DS+ G + G P +D+ F++ V DKP S+
Sbjct: 433 PNWAQFDSKTGQLFGTPTNEDVATTIDIAISVSDSIETARLPLFSLTVNNVNDKPTSEDL 492
Query: 154 TCIGDENRLV 163
+ DE++ V
Sbjct: 493 SITVDEDQSV 502
>UniRef50_A4C3J8 Cluster: Fibronectin type III domain protein; n=1;
Pseudoalteromonas tunicata D2|Rep: Fibronectin type III
domain protein - Pseudoalteromonas tunicata D2
Length = 1809
Score = 33.1 bits (72), Expect = 9.7
Identities = 18/70 (25%), Positives = 28/70 (40%)
Query: 94 PNWLAVDSRHGLISGIPQYQDIXXXXXXXXXXXXXKGLTATDSFTIEVKKGEDKPHSKYG 153
PNW DS+ G + G P +D+ F++ V DKP S+
Sbjct: 674 PNWAQFDSKTGQLFGTPTNEDVATTIDIAISVSDSIETARLPLFSLTVNNVNDKPTSEDL 733
Query: 154 TCIGDENRLV 163
+ DE++ V
Sbjct: 734 SITVDEDQSV 743
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.321 0.137 0.418
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 330,331,504
Number of Sequences: 1657284
Number of extensions: 12629104
Number of successful extensions: 22669
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 22603
Number of HSP's gapped (non-prelim): 68
length of query: 318
length of database: 575,637,011
effective HSP length: 101
effective length of query: 217
effective length of database: 408,251,327
effective search space: 88590537959
effective search space used: 88590537959
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 72 (33.1 bits)
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