GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001933-TA|BGIBMGA001933-PA|undefined
         (256 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    22   5.3  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    22   5.3  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    22   5.3  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    21   7.0  
AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax pr...    21   7.0  
AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax pr...    21   7.0  
AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax pr...    21   7.0  
AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax pr...    21   7.0  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           21   7.0  
AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax pr...    21   7.0  
AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduce...    21   7.0  

>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/41 (21%), Positives = 21/41 (51%)

Query: 1   FFYLYHFSFYAYHYRFNGQYSSLALVTSWLFIQHSMLYFFH 41
           F Y +    Y++ +        +ALV  ++ +QH+ ++ F+
Sbjct: 190 FDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFN 230


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/41 (21%), Positives = 21/41 (51%)

Query: 1   FFYLYHFSFYAYHYRFNGQYSSLALVTSWLFIQHSMLYFFH 41
           F Y +    Y++ +        +ALV  ++ +QH+ ++ F+
Sbjct: 190 FDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFN 230


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 21.8 bits (44), Expect = 5.3
 Identities = 9/41 (21%), Positives = 21/41 (51%)

Query: 1   FFYLYHFSFYAYHYRFNGQYSSLALVTSWLFIQHSMLYFFH 41
           F Y +    Y++ +        +ALV  ++ +QH+ ++ F+
Sbjct: 190 FDYFFGKMSYSHIFSLMDYNIVMALVLQFITLQHTFIWVFN 230


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 226 NTNNTEPPPLMTDPQV 241
           N N+T PP   + PQV
Sbjct: 33  NANSTYPPACYSPPQV 48


>AY055846-1|AAL26542.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 226 NTNNTEPPPLMTDPQV 241
           N N+T PP   + PQV
Sbjct: 33  NANSTYPPACYSPPQV 48


>AY055845-1|AAL23670.2|  230|Tribolium castaneum cephalothorax
           protein.
          Length = 230

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 226 NTNNTEPPPLMTDPQV 241
           N N+T PP   + PQV
Sbjct: 33  NANSTYPPACYSPPQV 48


>AF426396-1|AAL27023.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 226 NTNNTEPPPLMTDPQV 241
           N N+T PP   + PQV
Sbjct: 33  NANSTYPPACYSPPQV 48


>AF426395-1|AAL27022.2|  297|Tribolium castaneum cephalothorax
           protein.
          Length = 297

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 226 NTNNTEPPPLMTDPQV 241
           N N+T PP   + PQV
Sbjct: 33  NANSTYPPACYSPPQV 48


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 226 NTNNTEPPPLMTDPQV 241
           N N+T PP   + PQV
Sbjct: 33  NANSTYPPACYSPPQV 48


>AF261823-1|AAG13010.1|  157|Tribolium castaneum cephalothorax
           protein.
          Length = 157

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 226 NTNNTEPPPLMTDPQV 241
           N N+T PP   + PQV
Sbjct: 33  NANSTYPPACYSPPQV 48


>AF227628-1|AAF42868.1|  312|Tribolium castaneum sex combs reduced
           Scr protein.
          Length = 312

 Score = 21.4 bits (43), Expect = 7.0
 Identities = 8/16 (50%), Positives = 10/16 (62%)

Query: 226 NTNNTEPPPLMTDPQV 241
           N N+T PP   + PQV
Sbjct: 33  NANSTYPPACYSPPQV 48


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.316    0.132    0.400 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,418
Number of Sequences: 317
Number of extensions: 2103
Number of successful extensions: 13
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2
Number of HSP's gapped (non-prelim): 11
length of query: 256
length of database: 114,650
effective HSP length: 55
effective length of query: 201
effective length of database: 97,215
effective search space: 19540215
effective search space used: 19540215
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 42 (21.0 bits)