Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001933-TA|BGIBMGA001933-PA|undefined
(256 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF038... 47 1e-05
At3g18810.1 68416.m02389 protein kinase family protein contains ... 31 0.57
At2g15820.1 68415.m01814 pentatricopeptide (PPR) repeat-containi... 29 3.1
At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated... 29 4.0
At2g33350.1 68415.m04088 hypothetical protein 29 4.0
At5g40740.1 68418.m04944 expressed protein 28 5.3
At5g16680.1 68418.m01951 PHD finger family protein contains Pfam... 28 5.3
At5g12440.1 68418.m01462 zinc finger (CCCH-type) family protein ... 28 5.3
At5g04460.1 68418.m00443 expressed protein 28 5.3
At1g56460.1 68414.m06493 PAPA-1-like family protein / zinc finge... 28 5.3
At5g07920.1 68418.m00916 diacylglycerol kinase 1 (DGK1) identica... 28 7.1
At3g14020.1 68416.m01770 CCAAT-binding transcription factor (CBF... 28 7.1
At5g52230.1 68418.m06483 expressed protein 27 9.3
At5g22760.1 68418.m02658 PHD finger family protein contains Pfam... 27 9.3
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 27 9.3
At1g49190.1 68414.m05515 two-component responsive regulator fami... 27 9.3
At1g23170.1 68414.m02895 expressed protein Location of ESTs gb|A... 27 9.3
>At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF03800:
Nuf2 family domain; similar to Myosin-like protein NUF2
(Nuclear filament-containing protein 2) (Nuclear
division protein nuf2) (Swiss-Prot:Q10173)
[Schizosaccharomyces pombe]
Length = 974
Score = 46.8 bits (106), Expect = 1e-05
Identities = 19/48 (39%), Positives = 32/48 (66%)
Query: 1 FFYLYHFSFYAYHYRFNGQYSSLALVTSWLFIQHSMLYFFHHYELPVI 48
FF LY F+ Y + + +S LAL+T+ F+QH +LYF++ +E+P +
Sbjct: 775 FFLLYFLVFHIYFFSYAYGFSYLALMTTAAFMQHLILYFWNRFEVPAL 822
>At3g18810.1 68416.m02389 protein kinase family protein contains
Pfam PF00069: Protein kinase domain
Length = 700
Score = 31.5 bits (68), Expect = 0.57
Identities = 26/107 (24%), Positives = 41/107 (38%), Gaps = 8/107 (7%)
Query: 134 SNNSTENGASEIGNTNRALDNSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISN 193
+NN NG + N N N+N D + N NG+ NG+ + N
Sbjct: 71 NNNDGNNGNNNNDNNNNNNGNNNNDNNNGNNKDNNNNGNN----NNGNNNNGNDNN--GN 124
Query: 194 SNPGNAIPSGTTNRGNVTSNVETTILDLRRKDNTNNTEPPPLMTDPQ 240
+N GN + N G ++N R + N+ PP + P+
Sbjct: 125 NNNGNNNDNNNQNNGGGSNNRSPP--PPSRNSDRNSPSPPRALAPPR 169
>At2g15820.1 68415.m01814 pentatricopeptide (PPR) repeat-containing
protein contains Pfam profiles PF01535: PPR repeat,
PF03161 LAGLIDADG DNA endonuclease family
Length = 547
Score = 29.1 bits (62), Expect = 3.1
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 1/35 (2%)
Query: 6 HFSFYAYHYRFNGQYSSLALVTSWLFIQHSMLYFF 40
+F FYA HY GQ L+ WL HS+ Y++
Sbjct: 402 YFGFYAEHYWPKGQPEIPKLIHRWL-SPHSLAYWY 435
>At4g33930.1 68417.m04815 glycine-rich protein hyphally regulated
protein, Candida albicans, PIR2:S58135
Length = 343
Score = 28.7 bits (61), Expect = 4.0
Identities = 21/94 (22%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 137 STENGASEIGNTNRALDNSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISNSNP 196
ST NG S N + A +++ TS G +++ NG R +G + + SN
Sbjct: 99 STHNGHSSGSNHSSATGSTHNGHTSTGSNHSSGNGSR-----HNGYSSGSNHSSSTGSNH 153
Query: 197 GNAIPSGTTNRGNVTSNVETTILDLRRKDNTNNT 230
++ +G+T+ + + + ++IL K++++ +
Sbjct: 154 SSS--TGSTHNNHSSGSNHSSILGSTHKNHSSGS 185
>At2g33350.1 68415.m04088 hypothetical protein
Length = 440
Score = 28.7 bits (61), Expect = 4.0
Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 138 TENGASEIGNTNRALD-----NSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAI 191
T N +SE+ +T+ L+ +SNT+TT+ N N ++ +++ N +TD +I
Sbjct: 69 TFNQSSEVTSTSNILEKSGSFHSNTNTTTTTENSNNNNNNKNTNLQDDEDDNNNTDLSI 127
>At5g40740.1 68418.m04944 expressed protein
Length = 741
Score = 28.3 bits (60), Expect = 5.3
Identities = 13/31 (41%), Positives = 23/31 (74%), Gaps = 2/31 (6%)
Query: 176 KIEEIARKNGDTDKAISNSNPGNAIPSGTTN 206
K+E ++ KN TD+A+SN+ P N +P+ T++
Sbjct: 549 KMESLSEKNS-TDQALSNARPDN-LPTDTSS 577
>At5g16680.1 68418.m01951 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1290
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/64 (23%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 169 PNGDRTLKIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTSNVET-TILDLRRKDNT 227
P + +L + ++ D + S+P + G++ R + ++ +ET D R +N
Sbjct: 956 PQKNTSLPTSNVLPRDRDPKELCQTSSPSKHLEKGSSLRESSSNGIETRNGTDARSHENP 1015
Query: 228 NNTE 231
NN E
Sbjct: 1016 NNRE 1019
>At5g12440.1 68418.m01462 zinc finger (CCCH-type) family protein
contains Pfam domain, PF00642: Zinc finger
C-x8-C-x5-C-x3-H type (and similar)
Length = 552
Score = 28.3 bits (60), Expect = 5.3
Identities = 23/75 (30%), Positives = 34/75 (45%), Gaps = 5/75 (6%)
Query: 135 NNSTENGASEIGNTNRALDNSNTDTTSVGVIYNT-PNGDRT--LKIEEIARKNGDTDKAI 191
NNS NGA E N + LD + T + + N P+ T K ++ A N +
Sbjct: 476 NNSYSNGAKEETNKSELLDPDSGSTIELVLPSNLFPSASSTDDHKTDDSAETNAKV--GV 533
Query: 192 SNSNPGNAIPSGTTN 206
S++N + P TTN
Sbjct: 534 SSTNENDHEPPVTTN 548
>At5g04460.1 68418.m00443 expressed protein
Length = 863
Score = 28.3 bits (60), Expect = 5.3
Identities = 15/64 (23%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 135 NNSTENGASEIGNTNRALDNSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISNS 194
+N EN E +N DNSNT T ++ + N R + + G+ + ++
Sbjct: 440 HNGRENIVHE-NTSNTDNDNSNTSTNALAIAITAGNSQRVTDESSTSSRQGNDSPILPDN 498
Query: 195 NPGN 198
+ N
Sbjct: 499 SESN 502
>At1g56460.1 68414.m06493 PAPA-1-like family protein / zinc finger
(HIT type) family protein contains Pfam profile PF04795:
PAPA-1-like conserved region
Length = 502
Score = 28.3 bits (60), Expect = 5.3
Identities = 18/67 (26%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Query: 137 STENGASEIGNTNRALDNSNTDTTSVGVIYNTPNGDRTLKIE----EIARKN---GDTDK 189
S +GAS+IG + +++ D +G Y + +R+ K+ + A K+ DT
Sbjct: 131 SASDGASDIGLCSTKSSHASDDALGIGQTYQEISNERSTKLRGTPLDTASKSDSCNDTRD 190
Query: 190 AISNSNP 196
+ +N+NP
Sbjct: 191 SKANTNP 197
>At5g07920.1 68418.m00916 diacylglycerol kinase 1 (DGK1) identical
to diacylglycerol kinase 1 (Diglyceride kinase 1, DGK 1,
DAG kinase 1) [Arabidopsis thaliana] SWISS-PROT:Q39017
Length = 728
Score = 27.9 bits (59), Expect = 7.1
Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 3/58 (5%)
Query: 138 TENGASEIGNTNRALDNSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISNSN 195
T +++ GN+ D S T G T NG + I+ NGD+ S+SN
Sbjct: 267 TNETSADTGNSGSNCDESTESTADTGP---TVNGAHAVLENSISVMNGDSSNGDSDSN 321
>At3g14020.1 68416.m01770 CCAAT-binding transcription factor
(CBF-B/NF-YA) family protein contains Pfam profile:
PF02045 CCAAT-binding transcription factor (CBF-B/NF-YA)
subunit B
Length = 308
Score = 27.9 bits (59), Expect = 7.1
Identities = 10/35 (28%), Positives = 19/35 (54%)
Query: 219 LDLRRKDNTNNTEPPPLMTDPQVFRERVAPFREAD 253
L+ ++ +N++ PP + P VF+ FR+ D
Sbjct: 227 LNTKKHQESNSSLSPPFLIPPHVFKNSPGKFRQMD 261
>At5g52230.1 68418.m06483 expressed protein
Length = 746
Score = 27.5 bits (58), Expect = 9.3
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 176 KIEEIARKNGDTDKAISNSNPGNAIPSGTTNRGNVTS 212
K+E RKNG DK I + +P G + +T+
Sbjct: 15 KVEIRVRKNGRKDKVIVEKSAAQGLPEGWIKKLEITN 51
>At5g22760.1 68418.m02658 PHD finger family protein contains Pfam
domain, PF00628: PHD-finger
Length = 1566
Score = 27.5 bits (58), Expect = 9.3
Identities = 23/87 (26%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 131 GDMSNNSTENGASEIGNTNRALDNSNTDTTSVGVIYNTPNGD-------RTLKIEEIARK 183
G + N +T N ++I N+ L +S T + GV TP+ + +TL I RK
Sbjct: 1156 GQLQNAATSNTKTQIKRLNQQLPSSKTGDNASGVKQITPDFNLAPKSKHKTLSWGVIWRK 1215
Query: 184 NGDTDKAISNSNPGNAIPSGTTNRGNV 210
D +S + N + +G +++ N+
Sbjct: 1216 KNLADTGVSFRHE-NVMLAGRSDQPNL 1241
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 27.5 bits (58), Expect = 9.3
Identities = 18/66 (27%), Positives = 35/66 (53%), Gaps = 5/66 (7%)
Query: 133 MSNNSTENGASEIGNTNRALDNSNTDTTSVGVIYNTPNGDRTLKIEEIARKNGDTDKAI- 191
+S +S +G+ N+N ++ N+N D +++N + + I ++ + D K+I
Sbjct: 118 VSTSSRISGSFAASNSNTSMTNTNFDGKGTYLVFNVSD---AIFICDLNSQEKDPVKSIH 174
Query: 192 -SNSNP 196
SNSNP
Sbjct: 175 FSNSNP 180
>At1g49190.1 68414.m05515 two-component responsive regulator family
protein / response regulator family protein contains
Pfam profile: PF00072 response regulator receiver domain
;contains similarity to two-component response regulator
protein (ARR2) GI:4210451 from [Arabidopsis thaliana]
Length = 608
Score = 27.5 bits (58), Expect = 9.3
Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 2/71 (2%)
Query: 175 LKIEEIARKNGDTDKAISNSN-PGNAIPSGTTNRGNVTSNVETTILDLRRKDNTNNTEPP 233
++IE I R N + N N IP T G T+ T L+ DN N T P
Sbjct: 454 MRIEGITRSNVASHLQKHRINLEENQIPQQTQGNGWATA-YGTLAPSLQGSDNVNTTIPS 512
Query: 234 PLMTDPQVFRE 244
LM P +
Sbjct: 513 YLMNGPATLNQ 523
>At1g23170.1 68414.m02895 expressed protein Location of ESTs
gb|AA395014, gb|T23026, gb|N65311 and gb|N37226;
expression supported by MPSS
Length = 569
Score = 27.5 bits (58), Expect = 9.3
Identities = 19/60 (31%), Positives = 31/60 (51%), Gaps = 4/60 (6%)
Query: 160 TSVGVIYNTPNGDRTLKIEEIARKNGDTDKAISNSN--PGNAIPSGTTNR--GNVTSNVE 215
T+ G +N +G + + + RK D+A + N GN IP+GT + GNV ++E
Sbjct: 14 TTNGNSHNDDHGWKKVVYPKRNRKQKPADQAAATKNGVTGNLIPNGTLSNGGGNVFRSLE 73
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.316 0.132 0.400
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,978,704
Number of Sequences: 28952
Number of extensions: 193728
Number of successful extensions: 656
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 643
Number of HSP's gapped (non-prelim): 22
length of query: 256
length of database: 12,070,560
effective HSP length: 80
effective length of query: 176
effective length of database: 9,754,400
effective search space: 1716774400
effective search space used: 1716774400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
S2: 58 (27.5 bits)
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