Silkworm BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001932-TA|BGIBMGA001932-PA|undefined
         (74 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory recept...    19   7.3  
EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive pep...    18   9.7  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    18   9.7  

>AM292375-1|CAL23187.2|  311|Tribolium castaneum gustatory receptor
           candidate 54 protein.
          Length = 311

 Score = 18.6 bits (36), Expect = 7.3
 Identities = 6/10 (60%), Positives = 10/10 (100%)

Query: 8   TTTAFYIILI 17
           TTT+++II+I
Sbjct: 296 TTTSYFIIMI 305


>EF222291-1|ABN79651.1|  374|Tribolium castaneum cardioactive
           peptide receptor 1 protein.
          Length = 374

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 8/19 (42%), Positives = 11/19 (57%)

Query: 9   TTAFYIILIVWIADQYDAI 27
           T A   +L+    D+YDAI
Sbjct: 108 TYASTYVLVALSIDRYDAI 126


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 18.2 bits (35), Expect = 9.7
 Identities = 7/21 (33%), Positives = 11/21 (52%)

Query: 2   SEFFNDTTTAFYIILIVWIAD 22
           S   ND  + +YI+ I  I +
Sbjct: 161 SNIINDMCSLYYILQITLIVN 181


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.327    0.137    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,446
Number of Sequences: 317
Number of extensions: 592
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 74
length of database: 114,650
effective HSP length: 45
effective length of query: 29
effective length of database: 100,385
effective search space:  2911165
effective search space used:  2911165
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 35 (19.4 bits)
S2: 35 (18.2 bits)