GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001932-TA|BGIBMGA001932-PA|undefined
         (74 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering In...    23   1.1  
AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant r...    23   1.1  
CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    22   2.5  

>AY578809-1|AAT07314.1|  358|Anopheles gambiae Sloan-Kettering
           Institute proto-oncogeneproduct protein.
          Length = 358

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 29  CHTAIAKRHWLSFARGPISRYILNQKATEYEAIWLVVREGNKE 71
           CH      +W S+     S     + A   + IWL  RE  +E
Sbjct: 282 CHWGFNSSNWRSYIHVAESEKNREEHAQVLDKIWLKEREIEQE 324


>AF364132-2|AAL35509.1|  411|Anopheles gambiae putative odorant
           receptor Or3 protein.
          Length = 411

 Score = 23.0 bits (47), Expect = 1.1
 Identities = 13/47 (27%), Positives = 21/47 (44%), Gaps = 2/47 (4%)

Query: 13  YIILIVWIADQYDAI--CCHTAIAKRHWLSFARGPISRYILNQKATE 57
           Y+I +    D++  I  CCH ++A   W        S Y   + +TE
Sbjct: 133 YLISVNRRVDRFSKIYCCCHFSMATFFWFMPVWTTYSAYFAVRNSTE 179


>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 21.8 bits (44), Expect = 2.5
 Identities = 11/41 (26%), Positives = 18/41 (43%), Gaps = 6/41 (14%)

Query: 8   TTTAFYIILIVWIADQYDAICCHTAIAKRHWLSFARGPISR 48
           +T AF++ L  W A Q       T+     W++    P+ R
Sbjct: 416 STAAFFLFLARWFAQQI------TSSTDARWVAIQGNPVVR 450


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.327    0.137    0.448 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 79,808
Number of Sequences: 2123
Number of extensions: 2192
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of query: 74
length of database: 516,269
effective HSP length: 51
effective length of query: 23
effective length of database: 407,996
effective search space:  9383908
effective search space used:  9383908
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.7 bits)
S2: 40 (20.2 bits)