Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001931-TA|BGIBMGA001931-PA|undefined
(412 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF038... 45 8e-05
At3g31910.1 68416.m04037 hypothetical protein 35 0.11
At5g04020.1 68418.m00382 calmodulin-binding protein-related (PIC... 33 0.46
At1g69070.1 68414.m07903 expressed protein 32 0.80
At5g60140.1 68418.m07539 transcriptional factor B3 family protei... 31 1.4
At3g02340.1 68416.m00217 zinc finger (C3HC4-type RING finger) fa... 31 1.4
At4g15790.1 68417.m02403 expressed protein 31 1.9
At5g10940.1 68418.m01269 transducin family protein / WD-40 repea... 30 2.5
At1g21760.1 68414.m02724 F-box family protein Contains PF|00646 ... 30 3.2
At3g42723.1 68416.m04459 hypothetical protein 29 4.3
At1g10870.1 68414.m01249 ARF GTPase-activating domain-containing... 29 4.3
At5g42950.1 68418.m05236 GYF domain-containing protein contains ... 29 5.7
At4g08310.1 68417.m01372 expressed protein glutamic acid-rich pr... 29 5.7
At1g66230.1 68414.m07517 myb family transcription factor (MYB20)... 29 5.7
At1g17680.2 68414.m02189 transcription factor-related low simila... 29 5.7
At1g17680.1 68414.m02188 transcription factor-related low simila... 29 5.7
At4g20160.1 68417.m02949 expressed protein ; expression supporte... 29 7.5
At4g18150.1 68417.m02697 hypothetical protein 29 7.5
At4g09420.1 68417.m01551 disease resistance protein (TIR-NBS cla... 29 7.5
At4g03170.1 68417.m00433 hypothetical protein 29 7.5
At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM TIGR01... 29 7.5
At1g29760.1 68414.m03639 expressed protein 28 9.9
>At1g61000.1 68414.m06868 Nuf2 family protein contains Pfam PF03800:
Nuf2 family domain; similar to Myosin-like protein NUF2
(Nuclear filament-containing protein 2) (Nuclear
division protein nuf2) (Swiss-Prot:Q10173)
[Schizosaccharomyces pombe]
Length = 974
Score = 45.2 bits (102), Expect = 8e-05
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 274 YSLEYGFLRLSPSARLRLKIPVKIVTLDPQRDQCFGDSFSRFVLDEFLGYDDLLMASIKT 333
Y++E G+ L A+ R I V++ R CFG+ + + +++ +GYD ++M S++
Sbjct: 568 YTMEKGYFLLPDEAKSRHNIRTANVSISA-RHPCFGNRWQQLLINRVVGYDTIIMNSLQN 626
Query: 334 LAEQEDNKGYLRNVITGEHY 353
A Q GYL N T E Y
Sbjct: 627 SAGQ----GYLYNYQTREFY 642
>At3g31910.1 68416.m04037 hypothetical protein
Length = 399
Score = 34.7 bits (76), Expect = 0.11
Identities = 19/77 (24%), Positives = 38/77 (49%)
Query: 193 DEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLI 252
D T + + D E+ +EE+ ED+E S + + +E+++KD K +
Sbjct: 301 DISTMRNKKKKKVTDFIEEKDEEISKKKKDTLKEDLEKRSVLDVQLSNRIEEVEKDLKEM 360
Query: 253 DESLDESAANESSKDDD 269
ES ++A + + +DD+
Sbjct: 361 KESKPDAATSRNDEDDE 377
>At5g04020.1 68418.m00382 calmodulin-binding protein-related (PICBP)
contains similarity to potato calmodulin-binding protein
PCBP GI:17933110 from [Solanum tuberosum]
Length = 1495
Score = 32.7 bits (71), Expect = 0.46
Identities = 18/77 (23%), Positives = 35/77 (45%)
Query: 191 HEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSK 250
H + + + I+ + ED+ E L+ E+ + SS+W + +ED +K+
Sbjct: 1268 HYENEANAEIIRGKLRNLQEDLKESAKLDGVSKDLEEKQQCSSLWRILCKQMEDNEKNQT 1327
Query: 251 LIDESLDESAANESSKD 267
L +E+ E E +D
Sbjct: 1328 LPEETRKEEEEEELKED 1344
>At1g69070.1 68414.m07903 expressed protein
Length = 901
Score = 31.9 bits (69), Expect = 0.80
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 193 DEDTSQGIVETSYV-DKTEDVN-EELDLNTTIVSGEDVEPSSSIWEG--ILGLVEDIDKD 248
+E+ + + ET + D E++ EE T++SG+D+ S S+ E G ++D+ +
Sbjct: 291 EEERKKRMQETEELSDGDEEIGGEESTKRLTVISGDDLGDSFSVEEDKPKRGWIDDVLER 350
Query: 249 SKLIDES---LDESAANESSKDDD 269
+D S DE + +E +DDD
Sbjct: 351 EDNVDNSESDEDEDSESEEEEDDD 374
>At5g60140.1 68418.m07539 transcriptional factor B3 family protein
contains Pfam profile PF02362: B3 DNA binding domain
Length = 328
Score = 31.1 bits (67), Expect = 1.4
Identities = 21/107 (19%), Positives = 46/107 (42%), Gaps = 3/107 (2%)
Query: 192 EDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKL 251
+D D + + + + + + +E+D+ G D + S + + ED D+K
Sbjct: 151 DDSDNDYSVEDDNVAEDDDGLEDEVDVEAE--DGYDAKDSDGLEDEDDDEAED-GYDAKD 207
Query: 252 IDESLDESAANESSKDDDYILEYSLEYGFLRLSPSARLRLKIPVKIV 298
D DE + + Y+ ++ Y + L+P + +L IP ++
Sbjct: 208 DDGLEDEDDLEDEDDERRYLDDHENPYFTMTLNPKKKSQLHIPAHVI 254
>At3g02340.1 68416.m00217 zinc finger (C3HC4-type RING finger)
family protein contains Pfam profile: PF00097 Zinc
finger, C3HC4 type (RING finger)
Length = 409
Score = 31.1 bits (67), Expect = 1.4
Identities = 29/82 (35%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Query: 192 EDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKL 251
EDED + S D+ ED ELD + V EGI+ +DID D L
Sbjct: 216 EDEDEEDELSSLSRDDEEED--HELDWQVLLTVNNVVNYIEQA-EGIMLNPDDIDPDYYL 272
Query: 252 IDESLDESAANESSK-DDDYIL 272
LDE N S D D IL
Sbjct: 273 YLSGLDEFDENHSGHYDADAIL 294
>At4g15790.1 68417.m02403 expressed protein
Length = 191
Score = 30.7 bits (66), Expect = 1.9
Identities = 20/84 (23%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 188 TRIHEDEDTSQGIVETSYVDKTEDVNEEL-DLNTTIVSGEDVEPSSSIWEGILGLVEDID 246
T++ + G+ +T ++ E + EE DL TT+ +D +S G+ E ID
Sbjct: 109 TQVKVYREELSGLKKTLNLE-VEQLREEFKDLKTTLNQQQDDVSASLKSLGLQDSKEQID 167
Query: 247 KDSKLIDESLDESAANESSKDDDY 270
K S++ +E ++ + ++++K+ ++
Sbjct: 168 KRSEVTEEKVEALSTDDNAKEAEH 191
>At5g10940.1 68418.m01269 transducin family protein / WD-40 repeat
family protein unnamed ORF cDNA FLJ10872, Homo sapiens,
EMBL:AK001734; contains Pfam PF00400: WD domain, G-beta
repeat (6 copies,1 weak)
Length = 757
Score = 30.3 bits (65), Expect = 2.5
Identities = 20/89 (22%), Positives = 38/89 (42%)
Query: 189 RIHEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKD 248
R + D+S + + D D ELD+ T++ E + S+ G L L D
Sbjct: 516 RSEANSDSSHDMSRSEREDSDYDEELELDIQTSLSDDEGRDTDSNSMRGSLNLRIHRVGD 575
Query: 249 SKLIDESLDESAANESSKDDDYILEYSLE 277
K ++ ++D +++ +S + Y E
Sbjct: 576 DKPMENTVDNASSGTASSSQNDRTSYQPE 604
>At1g21760.1 68414.m02724 F-box family protein Contains PF|00646
F-box domain. ESTs gb|Z37267, gb|R90412, gb|Z37268 and
gb|T88189 come from this gene similar to SKP1
interacting partner 2 (SKIP2) TIGR_Ath1:At5g67250
Length = 328
Score = 29.9 bits (64), Expect = 3.2
Identities = 16/36 (44%), Positives = 21/36 (58%)
Query: 213 NEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKD 248
N +DL + + SG + E SS E ILGLVE + D
Sbjct: 248 NNRMDLLSLVTSGVNDEEISSTEEDILGLVEGWEDD 283
>At3g42723.1 68416.m04459 hypothetical protein
Length = 806
Score = 29.5 bits (63), Expect = 4.3
Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 1/77 (1%)
Query: 270 YILEYSLEYGFLRLSPSARLRLKIPVKIVTLDPQRDQCFGDSFSRFVLDEFLGYDDLLMA 329
YIL+ + + + S R +I ++I +D D C D R V+D LGY+ L
Sbjct: 474 YILQQEVSFSYRLASDVKRSCQEISLRINDIDIVEDYCVWD-LKRDVVDVILGYEWLSKL 532
Query: 330 SIKTLAEQEDNKGYLRN 346
+ Q + ++ N
Sbjct: 533 GETEVNWQNQSFSFIHN 549
>At1g10870.1 68414.m01249 ARF GTPase-activating domain-containing
protein
Length = 775
Score = 29.5 bits (63), Expect = 4.3
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 232 SSIWEGILGLVEDIDKDSKLIDESLDESAANES-SKDDDYILEYSLE 277
+S+WEG+L L +D + S L S+ + +S S + YIL LE
Sbjct: 546 NSLWEGLLHLDDDCEDGSALSHASVSKPCPEDSFSVKEKYILGKYLE 592
>At5g42950.1 68418.m05236 GYF domain-containing protein contains Pfam
profile: PF02213 GYF domain
Length = 1714
Score = 29.1 bits (62), Expect = 5.7
Identities = 14/39 (35%), Positives = 20/39 (51%)
Query: 317 LDEFLGYDDLLMASIKTLAEQEDNKGYLRNVITGEHYRF 355
+D+FL Y DLL + + +A Q G TGE Y +
Sbjct: 1626 IDKFLNYKDLLPSEVVEIAFQSKGSGVGTRNNTGEDYYY 1664
>At4g08310.1 68417.m01372 expressed protein glutamic acid-rich
protein precursor - Plasmodium falciparum, PIR2:A54514
Length = 504
Score = 29.1 bits (62), Expect = 5.7
Identities = 29/149 (19%), Positives = 67/149 (44%), Gaps = 11/149 (7%)
Query: 192 EDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKL 251
E+++TS+ +ET D V E +L+ + +D + + G +D L
Sbjct: 95 ENDETSENSLETEKKDDVTPVKEAAELSKEHTTKKDGKEDMT---GDDEKTKDSPVMGLL 151
Query: 252 IDESLDESAANESSKDDDYILEYSLEYGFLRLSP-----SARLRLKIPVKIVTLDPQRDQ 306
+E+ +S A ++ +D +L+ ++ + S S ++ + + +++ D + ++
Sbjct: 152 TEENTSKSVAEQTKDEDKEVLQSDIKKALRKRSSYIKANSEKITMGLLRRLLEQDLKLEK 211
Query: 307 CFGDSFSRFV---LDEFLGYDDLLMASIK 332
D + +F+ LDE L + +S K
Sbjct: 212 YSLDPYKKFINGELDEILQAHEATQSSTK 240
>At1g66230.1 68414.m07517 myb family transcription factor (MYB20)
similar to myb-related transcription factor GI:1430846
from [Lycopersicon esculentum]; contains PFAM profile:
Myb DNA binding domain PF00249
Length = 282
Score = 29.1 bits (62), Expect = 5.7
Identities = 16/59 (27%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Query: 221 TIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDESLDESAANESSKDDDYILEYSLEYG 279
+IV ED EP + + E +++ ++ ++ + E S DD +E +LEYG
Sbjct: 130 SIVEKEDEEPLKKLQNNTVPFQETMERP---LENNIKNISRLEESLGDDQFMEINLEYG 185
>At1g17680.2 68414.m02189 transcription factor-related low
similarity to SP|P33339 Transcription factor tau 131 kDa
subunit (TFIIIC 131 kDa subunit) Saccharomyces
cerevisiae, transcription factor IIIC102 short isoform
[Homo sapiens] GI:18481637
Length = 896
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 194 EDTSQGIVET---SYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSK 250
ED +G+VE + + + E+ ++ + ++ G+ + GLV+D D DS
Sbjct: 2 EDKGKGVVEGDEGNLISELEEGPSNMECDKQVLGGDTNYDDKDLNSDEEGLVDDDDDDSD 61
Query: 251 LIDESLDESAANESSKDDDY 270
D+ +ES ++DD+
Sbjct: 62 ------DDDEGDESEEEDDF 75
>At1g17680.1 68414.m02188 transcription factor-related low
similarity to SP|P33339 Transcription factor tau 131 kDa
subunit (TFIIIC 131 kDa subunit) Saccharomyces
cerevisiae, transcription factor IIIC102 short isoform
[Homo sapiens] GI:18481637
Length = 896
Score = 29.1 bits (62), Expect = 5.7
Identities = 19/80 (23%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 194 EDTSQGIVET---SYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSK 250
ED +G+VE + + + E+ ++ + ++ G+ + GLV+D D DS
Sbjct: 2 EDKGKGVVEGDEGNLISELEEGPSNMECDKQVLGGDTNYDDKDLNSDEEGLVDDDDDDSD 61
Query: 251 LIDESLDESAANESSKDDDY 270
D+ +ES ++DD+
Sbjct: 62 ------DDDEGDESEEEDDF 75
>At4g20160.1 68417.m02949 expressed protein ; expression supported
by MPSS
Length = 1188
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/78 (19%), Positives = 38/78 (48%), Gaps = 2/78 (2%)
Query: 192 EDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGI--LGLVEDIDKDS 249
E+ ++ + + E+ + E+ N E + + +E EG+ + ++ + DS
Sbjct: 170 ENSESLESVKESQMIQPIEECNNEEEEEEIECAPPPLESGEKDREGVRVMDIIRKLSNDS 229
Query: 250 KLIDESLDESAANESSKD 267
+ I + + S+ N++SK+
Sbjct: 230 ETITNNDNGSSGNDNSKE 247
>At4g18150.1 68417.m02697 hypothetical protein
Length = 762
Score = 28.7 bits (61), Expect = 7.5
Identities = 22/95 (23%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 192 EDEDTSQGIVETSYVDKT--EDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDS 249
E + +S E+ ++D+T +D++ E T S DV+ + LV+D +DS
Sbjct: 256 ESKISSDQFSESQHLDETLLDDIHRETKTYPT-GSPPDVDHNPLASVSSRNLVDDESRDS 314
Query: 250 KLIDESLDESAANESSKDDDYILEYSLEYGFLRLS 284
+ D+ +++ + ++ D + S+ GF +L+
Sbjct: 315 LVCDDENNKAERHSYEENQDEDVSTSVATGFQQLT 349
>At4g09420.1 68417.m01551 disease resistance protein (TIR-NBS
class), putative domain signature TIR-NBS exists,
suggestive of a disease resistance protein.
Length = 457
Score = 28.7 bits (61), Expect = 7.5
Identities = 18/76 (23%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 188 TRIHEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDK 247
+RIH+DE T ++ + D +++++L TI + +S+ +GL+ +D+
Sbjct: 151 SRIHDDETTIDMVITSQVKQILLDKDKQINLKATISHTVSNKQINSLTTKNVGLI-GLDR 209
Query: 248 DSKLIDESLDESAANE 263
++E LD + E
Sbjct: 210 HMLALNELLDLKSNEE 225
>At4g03170.1 68417.m00433 hypothetical protein
Length = 250
Score = 28.7 bits (61), Expect = 7.5
Identities = 15/61 (24%), Positives = 33/61 (54%), Gaps = 6/61 (9%)
Query: 206 VDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDESLDESAANESS 265
+D+ ED+++E D++ ++ ED E +S L L+++ + K E +E+ N+
Sbjct: 33 IDREEDIDDEDDIDDEVIDDEDYEVAS------LPLLQESQANQKQSREREEETEKNQPK 86
Query: 266 K 266
+
Sbjct: 87 R 87
>At1g20970.1 68414.m02625 adhesin-related contains TIGRFAM
TIGR01612: reticulocyte binding protein; contains
TIGRFAM TIGR00864: polycystin cation channel protein;
similar to fimbriae-associated protein Fap1
[Streptococcus parasanguinis] (GI:3929312)
Length = 1498
Score = 28.7 bits (61), Expect = 7.5
Identities = 22/71 (30%), Positives = 33/71 (46%), Gaps = 6/71 (8%)
Query: 190 IHEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGED--VEPSSSIWEGILGLVEDIDK 247
I E++ VE+ YV +D N E DL GE+ V+ S + +LG+ +D
Sbjct: 61 ITENDTVGDDFVESDYVKPVDDANVEKDLK----EGENVKVDAPSIADDDVLGVSQDSQT 116
Query: 248 DSKLIDESLDE 258
K ES D+
Sbjct: 117 LEKSELESTDD 127
>At1g29760.1 68414.m03639 expressed protein
Length = 526
Score = 28.3 bits (60), Expect = 9.9
Identities = 21/80 (26%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 202 ETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLID-------- 253
++SYV+K ++ ++D + I S +D SS E L ++ D +ID
Sbjct: 77 KSSYVEKNAELRGDIDTSDVIESTKDSIDLSSEKENDLDVISSSGNDMDVIDSGRNRVDP 136
Query: 254 ---ESLDESAANESSKDDDY 270
ES + +++ DDDY
Sbjct: 137 FQEESTVTTVSSDDQGDDDY 156
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.138 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,087,338
Number of Sequences: 28952
Number of extensions: 360027
Number of successful extensions: 1109
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 1096
Number of HSP's gapped (non-prelim): 28
length of query: 412
length of database: 12,070,560
effective HSP length: 83
effective length of query: 329
effective length of database: 9,667,544
effective search space: 3180621976
effective search space used: 3180621976
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 60 (28.3 bits)
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