Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001931-TA|BGIBMGA001931-PA|undefined
(412 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_06_0146 - 31976538-31978643,31978653-31978751 35 0.14
02_05_0702 - 31027908-31027958,31028062-31029311,31029665-310298... 33 0.42
09_03_0168 - 12983476-12983780,12984180-12984684 32 0.97
12_01_0618 - 5099021-5099668,5099701-5100221,5100311-5100352,510... 31 1.3
12_01_0220 - 1657554-1657620,1657943-1658109,1658110-1658267,165... 31 1.7
04_04_1250 + 32077590-32078000,32078132-32078308,32078437-320785... 31 2.2
10_06_0101 + 10736987-10737100,10737263-10737301,10737397-107374... 30 3.9
02_05_0947 + 32999767-33000300,33000363-33001519,33001618-33002113 30 3.9
12_01_0179 - 1319291-1319332,1319884-1320579,1322759-1323207,132... 29 5.1
03_02_0693 - 10441253-10441294,10441404-10441511,10441594-104416... 29 5.1
07_03_1027 - 23371826-23372006,23372110-23372171,23372595-233743... 29 6.8
11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,141... 29 9.0
08_02_0036 - 11455762-11455802,11455996-11456104,11456207-114568... 29 9.0
02_05_0960 + 33097510-33097821,33098846-33099043,33099174-330994... 29 9.0
01_06_0493 + 29773536-29773582,29774209-29774260,29774405-29776405 29 9.0
>03_06_0146 - 31976538-31978643,31978653-31978751
Length = 734
Score = 34.7 bits (76), Expect = 0.14
Identities = 22/84 (26%), Positives = 40/84 (47%), Gaps = 4/84 (4%)
Query: 192 EDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKL 251
E++DT +ET + TE +EE D + D+E S E E+ D + ++
Sbjct: 191 EEDDTGSSDLETDSDEYTESTDEESDYEEEDTT--DLESDSD--EDTESTDEESDYEEEI 246
Query: 252 IDESLDESAANESSKDDDYILEYS 275
DE +D+ + E DD ++ ++
Sbjct: 247 DDEEIDDESVEEDINLDDELMGFA 270
>02_05_0702 - 31027908-31027958,31028062-31029311,31029665-31029842,
31029955-31030017,31031597-31031704,31031772-31031836,
31031928-31032015,31032104-31032157,31032234-31032380,
31033358-31033429,31034077-31034226,31034317-31034430,
31034762-31034875,31035925-31036077,31037437-31037529,
31038202-31038318,31038984-31039086,31039192-31039376,
31039448-31039522,31040451-31040534,31041547-31041588,
31041668-31041847,31042109-31042162,31042239-31042280,
31042869-31042967,31043040-31043174,31043325-31043427,
31045061-31045134,31045227-31045270,31045393-31045471,
31045592-31045705,31045842-31045946,31046027-31046161,
31046447-31046546,31046870-31046883,31046936-31047004,
31047079-31047182,31047299-31047347,31047931-31048023,
31048102-31048210,31048619-31048755,31048851-31048928,
31049015-31049104,31049402-31049467,31049546-31049638,
31049711-31049839,31050024-31050122,31051366-31051512,
31051605-31051910
Length = 2050
Score = 33.1 bits (72), Expect = 0.42
Identities = 21/81 (25%), Positives = 41/81 (50%), Gaps = 4/81 (4%)
Query: 192 EDEDTSQGIVETSYVDKT--EDVNEELDLNTTIVSGEDVEPSSSIW--EGILGLVEDIDK 247
E+ DT Q + V++T +D+ ++ D+ T I + D++ + + VED+
Sbjct: 1772 EEMDTDQSSLPVEEVEETREDDLGDKDDMETHIDASMDIQGQDAETGIDNDATTVEDVPV 1831
Query: 248 DSKLIDESLDESAANESSKDD 268
S+ + ESL+E E K++
Sbjct: 1832 KSEAVMESLEEDLKTEDGKEE 1852
>09_03_0168 - 12983476-12983780,12984180-12984684
Length = 269
Score = 31.9 bits (69), Expect = 0.97
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 210 EDVNEELDLNTTIVSGEDV-EPSSSIWEGILGLVED-IDKDSKLIDESL--DESAANESS 265
+D EELD + ED+ E + +G LG V+D ++D++ +E + DE N+
Sbjct: 44 DDEGEELDHASNNSLDEDINEDAEDEEDGKLGEVDDRCEEDNEGSEEDVGTDEVTDNDDQ 103
Query: 266 KDDDYILEYSL 276
++DD + YS+
Sbjct: 104 EEDDTVFFYSI 114
>12_01_0618 -
5099021-5099668,5099701-5100221,5100311-5100352,
5100905-5100962
Length = 422
Score = 31.5 bits (68), Expect = 1.3
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 3/62 (4%)
Query: 334 LAEQEDNKGYLRNVITGEHYRFVSMLTARSSYVAAFFIMLVFRRPLVNHIAATRGPLVDN 393
LAE+ED L+ ++ GE + + T RSS L PL + T GP VD
Sbjct: 218 LAEEEDEDEPLKGMLVGEKDKNECLKTMRSSSGPCPSFTLTDAMPL---LTPTSGPAVDT 274
Query: 394 EW 395
W
Sbjct: 275 PW 276
>12_01_0220 -
1657554-1657620,1657943-1658109,1658110-1658267,
1658362-1658447,1658559-1658808,1659194-1660320,
1662207-1662351,1663555-1663696,1663775-1663828,
1663914-1663985,1664710-1664778,1664885-1664926,
1665024-1665092,1665257-1665394,1665518-1665628,
1665704-1665836,1666834-1666889,1667191-1667901
Length = 1198
Score = 31.1 bits (67), Expect = 1.7
Identities = 22/85 (25%), Positives = 43/85 (50%), Gaps = 3/85 (3%)
Query: 192 EDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVED--IDKDS 249
E+E+ +G+ + + ++ + DL+ +V GE+ E +G + +++DS
Sbjct: 153 EEEEDKEGLEDKAGNQVEDEFFKIKDLDKFMVKGEEAEYGGGAKQGKKKKKTENWMEEDS 212
Query: 250 -KLIDESLDESAANESSKDDDYILE 273
+ +E LDE NE +DDD L+
Sbjct: 213 DEEEEEDLDEDEDNEDEEDDDEHLD 237
>04_04_1250 +
32077590-32078000,32078132-32078308,32078437-32078561,
32078629-32078761,32078866-32079015,32079105-32079158,
32079437-32079532,32080021-32080095,32080723-32080824,
32080903-32081589,32081686-32081817,32081916-32082023,
32082170-32082319
Length = 799
Score = 30.7 bits (66), Expect = 2.2
Identities = 24/75 (32%), Positives = 37/75 (49%), Gaps = 6/75 (8%)
Query: 195 DTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDE 254
DT +G+ E + ED EELD + I S D E + + L L D+D+++ + E
Sbjct: 526 DTDEGMKEEDQLSGDEDDTEELDEDQDI-SDNDSEEN----DDELELDSDMDEEND-VSE 579
Query: 255 SLDESAANESSKDDD 269
S D+ +E D D
Sbjct: 580 SDDDEELSEKLDDSD 594
>10_06_0101 +
10736987-10737100,10737263-10737301,10737397-10737474,
10737539-10737685,10737781-10737888,10738115-10738449,
10738572-10739544,10739702-10739980
Length = 690
Score = 29.9 bits (64), Expect = 3.9
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)
Query: 60 AVAYARTFPRPVRRFFEFLVLLKAILAF--FVLAYIHIAFSRTPTTCLNHVKDSW 112
+VAY R+ P+RR FL LL A+L F F + + +A R+P + SW
Sbjct: 8 SVAYPRSLS-PLRRCPGFLALLVAVLLFLSFQIGSVRMALLRSPDWAQGSRELSW 61
>02_05_0947 + 32999767-33000300,33000363-33001519,33001618-33002113
Length = 728
Score = 29.9 bits (64), Expect = 3.9
Identities = 32/97 (32%), Positives = 43/97 (44%), Gaps = 12/97 (12%)
Query: 266 KDDDYILEYSLEYGFLRLSPSARLRLK--------IPVKIVTLDP--QRDQCFGDSFSRF 315
+D+ Y L +L FLRLSPS+ L+ + I V T+ P Q C F
Sbjct: 116 RDEAYELHTTLSSSFLRLSPSSGLQAESNSATDAVIAVINSTMRPSYQTRLCPQHRLLPF 175
Query: 316 VLDEFLGYDDLLMASIKTLAEQEDNKGYLRNVITGEH 352
V + F Y+ AS K + E ED+K L G H
Sbjct: 176 VANMF--YEGYERASGKPINETEDSKSPLDTTGHGTH 210
>12_01_0179 -
1319291-1319332,1319884-1320579,1322759-1323207,
1323291-1324903,1324991-1325077,1326983-1327251
Length = 1051
Score = 29.5 bits (63), Expect = 5.1
Identities = 22/89 (24%), Positives = 38/89 (42%), Gaps = 2/89 (2%)
Query: 188 TRIHEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDK 247
T ++E+ T G + D + + T V V PSS + G+ ED+ +
Sbjct: 225 TALNEEIHTKDGTSDYDLQDTHREGKGITSVETDTVPC--VAPSSFAYSGVTVETEDVGE 282
Query: 248 DSKLIDESLDESAANESSKDDDYILEYSL 276
+SK DE + + N S ++ +Y L
Sbjct: 283 NSKKNDELQELGSINPESDNNKVQYQYQL 311
>03_02_0693 -
10441253-10441294,10441404-10441511,10441594-10441677,
10441765-10443062,10443111-10444804,10444890-10444957,
10445057-10445186,10445292-10445415,10445551-10445711,
10446714-10446868
Length = 1287
Score = 29.5 bits (63), Expect = 5.1
Identities = 24/83 (28%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Query: 191 HEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSK 250
H E+T I E Y + TED++ E+ GE++E S E + ED+++ ++
Sbjct: 669 HAPENTQDQIGEHFYREVTEDIHTEVVPENGPDIGEELEEGSITEEKV--NEEDVEESNE 726
Query: 251 LIDESLDESA--ANESSKDDDYI 271
+LDE+ E DD I
Sbjct: 727 SDAYTLDENTEYIEEQVVSDDLI 749
>07_03_1027 -
23371826-23372006,23372110-23372171,23372595-23374335,
23374609-23374704,23374967-23375043,23376807-23377307
Length = 885
Score = 29.1 bits (62), Expect = 6.8
Identities = 26/135 (19%), Positives = 62/135 (45%), Gaps = 3/135 (2%)
Query: 215 ELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDESLDESAANESSKDDDYILEY 274
+LD +S ++P+SS+W +L + K++ L +E + E +++
Sbjct: 658 DLDEAYNFISEMKIKPTSSVWSTLLRACR-VHKNTVLAEEVAKKIFELEPKSMGSHVILS 716
Query: 275 SLEYGFLRLSPSARLRLKIPVKIVTLDPQRDQC-FGDSFSRFVL-DEFLGYDDLLMASIK 332
++ R + +A+LR + +K + +P + F+ D+ + D ++ ++
Sbjct: 717 NMYSASGRWNEAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALN 776
Query: 333 TLAEQEDNKGYLRNV 347
+EQ +GY+ N+
Sbjct: 777 VYSEQMIRQGYVPNM 791
>11_01_0179 - 1412391-1412863,1412947-1413412,1413504-1414551,
1414639-1414725,1416244-1416411,1416785-1416958,
1417662-1417720,1418132-1420154,1420549-1420647,
1420998-1421796,1422101-1422120,1422446-1422513
Length = 1827
Score = 28.7 bits (61), Expect = 9.0
Identities = 15/49 (30%), Positives = 25/49 (51%)
Query: 228 VEPSSSIWEGILGLVEDIDKDSKLIDESLDESAANESSKDDDYILEYSL 276
V PSS + G+ ED+ ++SK DE + + N S ++ +Y L
Sbjct: 1310 VAPSSFAYSGVTVETEDVGENSKKNDELQELGSINPESDNNKVQYQYQL 1358
>08_02_0036 -
11455762-11455802,11455996-11456104,11456207-11456854,
11457422-11457491,11458563-11458624,11458729-11458803,
11459423-11459514,11460233-11461466
Length = 776
Score = 28.7 bits (61), Expect = 9.0
Identities = 27/101 (26%), Positives = 41/101 (40%), Gaps = 1/101 (0%)
Query: 193 DEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLI 252
DE+ S E V++E+ + G E SS W + LV+ D D
Sbjct: 246 DEELSGSDSEEDLSIGDSSVDDEVVADYMEGIGGSEELLSSKWVAGMNLVDSDDDDEMDT 305
Query: 253 DESLDESAANESSKDDDY-ILEYSLEYGFLRLSPSARLRLK 292
DE D + + Y ++ S +YG R S + RL+ K
Sbjct: 306 DEDEDGFLKKVKGQLEGYALMNASEQYGMKRPSSADRLKGK 346
>02_05_0960 +
33097510-33097821,33098846-33099043,33099174-33099446,
33099575-33099677,33100297-33100415,33100968-33101759
Length = 598
Score = 28.7 bits (61), Expect = 9.0
Identities = 17/64 (26%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 196 TSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSK-LIDE 254
T+ G TS + +T ++ + + S E+V+ SS + + + + E +D D + +ID
Sbjct: 385 TNDGSESTSLLTETTEIVKTETMQ--FASSEEVQSSSEVSDAVGMMDEKVDSDGEDIIDH 442
Query: 255 SLDE 258
+DE
Sbjct: 443 HVDE 446
>01_06_0493 + 29773536-29773582,29774209-29774260,29774405-29776405
Length = 699
Score = 28.7 bits (61), Expect = 9.0
Identities = 16/57 (28%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 216 LDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDESLDESAANESSKDDDYIL 272
LD ++G +EP +W +L I K+ +L ++D+ A ES D ++L
Sbjct: 480 LDDAVNFINGMPLEPHEGVWGALLN-ASRIHKNVELGKYAMDKLMAIESKNDAAHVL 535
Database: rice
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.320 0.138 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,027,899
Number of Sequences: 37544
Number of extensions: 422113
Number of successful extensions: 983
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 975
Number of HSP's gapped (non-prelim): 22
length of query: 412
length of database: 14,793,348
effective HSP length: 84
effective length of query: 328
effective length of database: 11,639,652
effective search space: 3817805856
effective search space used: 3817805856
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
- SilkBase 1999-2023 -