Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001931-TA|BGIBMGA001931-PA|undefined
(412 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17) 107 1e-23
SB_44597| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.14
SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069) 33 0.42
SB_5412| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.42
SB_16363| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 2.3
SB_3866| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 3.9
SB_49767| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_11327| Best HMM Match : Upf2 (HMM E-Value=5.9) 29 5.2
SB_2546| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 5.2
SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08) 29 6.9
SB_11765| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 6.9
SB_8459| Best HMM Match : DUF408 (HMM E-Value=0.62) 29 6.9
SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13) 29 9.1
SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10) 29 9.1
SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9) 29 9.1
SB_20713| Best HMM Match : Pkinase (HMM E-Value=0) 29 9.1
SB_4762| Best HMM Match : tRNA-synt_1b (HMM E-Value=0.00013) 29 9.1
>SB_32523| Best HMM Match : 7tm_1 (HMM E-Value=1.4e-17)
Length = 1130
Score = 107 bits (258), Expect = 1e-23
Identities = 53/88 (60%), Positives = 63/88 (71%), Gaps = 5/88 (5%)
Query: 259 SAANESSKDDDYILEYSLEYGFLRLSPSARLRLKIPVKIVTL-----DPQRDQCFGDSFS 313
S E K ++Y +EY+LEYGFLRLS R RL I V V L DP+ +QCFGD+ S
Sbjct: 346 SHKEEEEKKEEYCMEYALEYGFLRLSTETRKRLNITVMTVKLNINIIDPEEEQCFGDTLS 405
Query: 314 RFVLDEFLGYDDLLMASIKTLAEQEDNK 341
RF+LDEFLGYDD+LM+SIK LAE EDNK
Sbjct: 406 RFLLDEFLGYDDVLMSSIKRLAEHEDNK 433
>SB_44597| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 184
Score = 34.7 bits (76), Expect = 0.14
Identities = 22/77 (28%), Positives = 41/77 (53%), Gaps = 4/77 (5%)
Query: 193 DEDTSQGIVET-SYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKL 251
D+D G+ + + VD +DV++++D + I EDV S+I + +V+D +
Sbjct: 44 DDDDDDGVDDDGNAVDNNDDVDDDIDDDNNI---EDVYDDSNIEDVYDDIVDDDNNIEDY 100
Query: 252 IDESLDESAANESSKDD 268
D+S+D+ + E DD
Sbjct: 101 YDDSVDDDSNIEDVYDD 117
>SB_53200| Best HMM Match : Apolipoprotein (HMM E-Value=0.0069)
Length = 246
Score = 33.1 bits (72), Expect = 0.42
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 4/78 (5%)
Query: 186 NITRIHEDEDTSQGIVETSYVDKTEDVNEELD--LNTTIVSGEDVEPS--SSIWEGILGL 241
++ + E D S ++ S + E ++E LD L T S E ++ S S+ E + L
Sbjct: 151 SLETLDESLDESLETLDESLDESLETLDESLDESLETLDESLETLDESLDESLDESLETL 210
Query: 242 VEDIDKDSKLIDESLDES 259
E +D+ + +DESLDES
Sbjct: 211 DESLDESLETLDESLDES 228
Score = 31.9 bits (69), Expect = 0.98
Identities = 26/92 (28%), Positives = 47/92 (51%), Gaps = 2/92 (2%)
Query: 186 NITRIHEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDI 245
++ + E +T +ET + E ++E LD + + E ++ E + +E +
Sbjct: 130 SLETLDESLETLDESLET-LDESLETLDESLDESLETLDESLDESLETLDESLDESLETL 188
Query: 246 DKDSKLIDESLDESAANESSKDDDYILEYSLE 277
D+ + +DESLDES +ES + D L+ SLE
Sbjct: 189 DESLETLDESLDES-LDESLETLDESLDESLE 219
Score = 31.5 bits (68), Expect = 1.3
Identities = 43/164 (26%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 186 NITRIHEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDI 245
++ +HE +T Q +E E ++E LD E +E E + +E +
Sbjct: 97 SLETLHESLETLQESLEKLLESLHESLDESLD--------ESLETLDESLETLDESLETL 148
Query: 246 DKDSKLIDESLDES--AANESSKDDDYILEYSLEYGFLRLSPSAR-----LRLKIPVKIV 298
D+ + +DESLDES +ES + L+ SL+ L S L + +
Sbjct: 149 DESLETLDESLDESLETLDESLDESLETLDESLDESLETLDESLETLDESLDESLDESLE 208
Query: 299 TLDPQRDQCFGDSFSRFVLDEFLGYD-DLLMASIKTLAEQEDNK 341
TLD D+ S LDE L ++L S++TL E +++
Sbjct: 209 TLDESLDE------SLETLDESLDESLEILDESLETLDESLESR 246
Score = 28.7 bits (61), Expect = 9.1
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 14/152 (9%)
Query: 190 IHEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDS 249
+ E D S ++ S + E ++E LD + + E ++ E + L E ++K
Sbjct: 61 LDESLDESLETLDESPDESLETLDESLDESLETLD----ESLETLHESLETLQESLEKLL 116
Query: 250 KLIDESLDESAANESSKDDDYILEYSLEYGFLRLSPSAR-LRLKIPVKIVTLDPQRDQCF 308
+ + ESLDES +ES + D LE +L+ L S L + + TLD D+
Sbjct: 117 ESLHESLDES-LDESLETLDESLE-TLDESLETLDESLETLDESLDESLETLDESLDE-- 172
Query: 309 GDSFSRFVLDEFLGYD-DLLMASIKTLAEQED 339
S LDE L + L S++TL E D
Sbjct: 173 ----SLETLDESLDESLETLDESLETLDESLD 200
>SB_5412| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 170
Score = 33.1 bits (72), Expect = 0.42
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 4/77 (5%)
Query: 193 DEDTSQGIVET-SYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKL 251
D+D G+ + + VD +DV++++D + I EDV S+I + V+D +
Sbjct: 44 DDDDDDGVDDDGNAVDNNDDVDDDIDDDNNI---EDVYDDSNIEDVYDDSVDDDNNIEDY 100
Query: 252 IDESLDESAANESSKDD 268
D+S+D+ + E DD
Sbjct: 101 YDDSVDDDSNLEDVYDD 117
>SB_16363| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 30.7 bits (66), Expect = 2.3
Identities = 19/86 (22%), Positives = 39/86 (45%)
Query: 198 QGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDESLD 257
Q E+ YV+ +E ++ + ++ I EDVE + + + + E +D++ + E
Sbjct: 124 QSNTESFYVEPSERYFDKPEFHSVIYRSEDVENKGNYADMSMKMPEILDREKRDSGEDRP 183
Query: 258 ESAANESSKDDDYILEYSLEYGFLRL 283
A + K D L ++ F +L
Sbjct: 184 RRATEQEKKLDSCTLALYADHLFTKL 209
>SB_3866| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1178
Score = 29.9 bits (64), Expect = 3.9
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 3/56 (5%)
Query: 216 LDLNTTIVSG--EDVEPSSSIWEGILGLVEDIDKDS-KLIDESLDESAANESSKDD 268
+D+ T +G ED EP +W +G E + +DS L+ LD A E+ +D
Sbjct: 30 VDIRTVEFAGKDEDGEPKKELWLPPVGTAEPVSEDSDPLVRMLLDVDAKQEAMLED 85
>SB_49767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 196
Score = 29.5 bits (63), Expect = 5.2
Identities = 23/88 (26%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 192 EDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGE----DVEPSSSIWEGILGLVEDIDK 247
EDED ++G + D + ++++D N V G+ + + ++G +D+D
Sbjct: 14 EDEDDNEGDDDDVKDDDDDGYDDDVDNN---VDGDYDLIKIMMMMTTTTMMIGYDDDVDD 70
Query: 248 DSKLIDESLDESAANESSKDDDYILEYS 275
D D+ DE ++ DDD EYS
Sbjct: 71 DDDDGDDDDDEGDDDDDDGDDDVDDEYS 98
>SB_11327| Best HMM Match : Upf2 (HMM E-Value=5.9)
Length = 564
Score = 29.5 bits (63), Expect = 5.2
Identities = 16/81 (19%), Positives = 36/81 (44%)
Query: 193 DEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLI 252
D+D + + VD T+D N +V+ D ++ + ++ +D + +
Sbjct: 205 DDDDEVDAADDNVVDATDDDNVVDAAGDNVVNAADDNVVNAADDNVVDAADDDNVMDADV 264
Query: 253 DESLDESAANESSKDDDYILE 273
D +D+ NE + DD +++
Sbjct: 265 DNEVDDDDDNEVNAADDNVVD 285
>SB_2546| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 312
Score = 29.5 bits (63), Expect = 5.2
Identities = 18/68 (26%), Positives = 33/68 (48%), Gaps = 5/68 (7%)
Query: 207 DKTEDVNEELDLNTTIVSGEDVEPSSSI-WEGILGLVE----DIDKDSKLIDESLDESAA 261
+ +D ++ +D N IV ++V ++ +G G V+ D+DKD D+ D+
Sbjct: 47 NNVDDDDDNVDDNNNIVDDDNVNDDDNVDVDGNDGNVDNDDDDVDKDDVDNDDKFDDYVI 106
Query: 262 NESSKDDD 269
+ DDD
Sbjct: 107 TDDDDDDD 114
>SB_55989| Best HMM Match : zf-C2H2 (HMM E-Value=8e-08)
Length = 1011
Score = 29.1 bits (62), Expect = 6.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 389 PLVDNEWTSYGEDAGEDWVPGWLK 412
PLV + W S+G D+ DW G L+
Sbjct: 182 PLVSSSWQSFGSDSECDWREGSLR 205
>SB_11765| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 130
Score = 29.1 bits (62), Expect = 6.9
Identities = 25/78 (32%), Positives = 42/78 (53%), Gaps = 11/78 (14%)
Query: 192 EDEDTSQGIVETSYVDKTEDVN-EELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSK 250
ED D + I + VD D++ EE+D N I EDV+ ++ I + ED+D ++
Sbjct: 56 EDVDDNTDI-DKEDVDDNNDIDKEEVDDNNDI-DKEDVDDNNDIDK------EDVDDNND 107
Query: 251 LIDESLDESAANESSKDD 268
+ E +D++ N+ KDD
Sbjct: 108 IDKEDVDDN--NDIDKDD 123
>SB_8459| Best HMM Match : DUF408 (HMM E-Value=0.62)
Length = 581
Score = 29.1 bits (62), Expect = 6.9
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 389 PLVDNEWTSYGEDAGEDWVPGWLK 412
PLV + W S+G D+ DW G L+
Sbjct: 251 PLVSSSWQSFGSDSECDWREGSLR 274
>SB_38792| Best HMM Match : 7tm_2 (HMM E-Value=2e-13)
Length = 1287
Score = 28.7 bits (61), Expect = 9.1
Identities = 25/83 (30%), Positives = 33/83 (39%), Gaps = 2/83 (2%)
Query: 210 EDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDESLDESAANESSKDDD 269
E E D N S +D+E I E + EDI KD I+ S E E S+ +
Sbjct: 135 EKDEREADKNCEEGSNDDIENRGDIVERTISCTEDIQKDQ--IEISYQEKYEKELSEKNT 192
Query: 270 YILEYSLEYGFLRLSPSARLRLK 292
I LE L S L ++
Sbjct: 193 AIESSVLEEQGLSEGSSITLEIE 215
>SB_18949| Best HMM Match : GTP_EFTU (HMM E-Value=1.7e-10)
Length = 783
Score = 28.7 bits (61), Expect = 9.1
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 2/77 (2%)
Query: 192 EDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKL 251
E E + ET +TED E D+ + E SS E +D D+D
Sbjct: 551 EKETETDDTKETDDTKETEDTKETEDIKAN--ERKKSESSSVGNEEEESSEDDDDEDDDE 608
Query: 252 IDESLDESAANESSKDD 268
D+ +ES++ ESS D+
Sbjct: 609 EDDDGNESSSEESSDDE 625
>SB_53810| Best HMM Match : DUF1542 (HMM E-Value=3.9)
Length = 560
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/81 (24%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 190 IHEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVS-GEDVEPSSSIWEGILGLVEDIDKD 248
I+ D+D + D +D+N + D + ++ G+D I+ G V+DI+ D
Sbjct: 373 INSDDDAADDADYYVNSDADDDINGDDDADDEDINIGDDDAADDDIYGD--GDVDDINGD 430
Query: 249 SKLIDESLDESAANESSKDDD 269
DE+++ A++ D D
Sbjct: 431 DDADDENINSDDADDDHDDAD 451
>SB_20713| Best HMM Match : Pkinase (HMM E-Value=0)
Length = 492
Score = 28.7 bits (61), Expect = 9.1
Identities = 17/54 (31%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 243 EDIDKDSKLIDESLDESAANESSKDDDYILEYSLEYGFLRLSPSARLRLKIPVK 296
E IDK+S+ +++ + SS+D+ L+ S+ G R P A+ +L VK
Sbjct: 359 ESIDKESESVEKDIMSLKELMSSQDEPLTLDISMS-GIYRDDPIAKYKLHPEVK 411
>SB_4762| Best HMM Match : tRNA-synt_1b (HMM E-Value=0.00013)
Length = 396
Score = 28.7 bits (61), Expect = 9.1
Identities = 20/80 (25%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 191 HEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSK 250
++D+D+S + S + D ++ D + T +D + + G G+ D+D DS
Sbjct: 154 NDDDDSSDD--DRSDDNGDNDEGDDNDDDGTFGDDDDSDADGGVDGGCDGV--DVDDDSG 209
Query: 251 LIDESLDESAANESSKDDDY 270
+ D +D+ N DDD+
Sbjct: 210 IDDCVVDDGGDNGHDDDDDH 229
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.138 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,466,846
Number of Sequences: 59808
Number of extensions: 490031
Number of successful extensions: 1380
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 1345
Number of HSP's gapped (non-prelim): 47
length of query: 412
length of database: 16,821,457
effective HSP length: 84
effective length of query: 328
effective length of database: 11,797,585
effective search space: 3869607880
effective search space used: 3869607880
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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