Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001931-TA|BGIBMGA001931-PA|undefined
(412 letters)
Database: celegans
27,539 sequences; 12,573,161 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF099003-1|AAC68742.1| 440|Caenorhabditis elegans Hypothetical ... 77 2e-14
U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical pr... 35 0.092
Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical pr... 32 0.65
Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical pr... 32 0.65
U49830-13|AAK31474.1| 826|Caenorhabditis elegans Hypothetical p... 32 0.65
AC006720-7|AAF60444.1| 511|Caenorhabditis elegans Cytochrome p4... 32 0.65
AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein. 30 2.6
AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp ge... 30 2.6
Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 6.0
Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical pr... 29 6.0
U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate rece... 29 6.0
AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic gl... 29 6.0
U58752-1|AAB00664.1| 377|Caenorhabditis elegans P38 map kinase ... 29 8.0
>AF099003-1|AAC68742.1| 440|Caenorhabditis elegans Hypothetical
protein Y59C2A.2 protein.
Length = 440
Score = 77.4 bits (182), Expect = 2e-14
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 8/113 (7%)
Query: 270 YILEYSLEYGFLRLSPSARLRLKIPVKIVTLDPQRDQCFGDSFSRFVLDEFLGYDDLLMA 329
Y +EY++ YG LRL P R IP + +D + QCFGD +R ++ F+GY+D ++A
Sbjct: 277 YRVEYAMLYGVLRLPPDFREEHGIPTTWIRID-SKSQCFGDQLARLMMRLFVGYEDTVIA 335
Query: 330 SIKTLA-------EQEDNKGYLRNVITGEHYRFVSMLTARSSYVAAFFIMLVF 375
+++ A + + GYL N+ T +HY FV+ ++SY+ A +M++F
Sbjct: 336 ALRAQAINLSLVHPETHSMGYLHNLQTHDHYHFVANSLGKASYLTAGALMIIF 388
Score = 69.7 bits (163), Expect = 3e-12
Identities = 32/77 (41%), Positives = 48/77 (62%)
Query: 49 ERLFHALFFKFAVAYARTFPRPVRRFFEFLVLLKAILAFFVLAYIHIAFSRTPTTCLNHV 108
+RLFHA+ + A+ Y+ RRF E +L A L L +IHI F+R+P TCL+ +
Sbjct: 72 DRLFHAMLVRVALKYSGRVSLKWRRFIEGSLLFVAFLLLASLLFIHINFTRSPATCLDSM 131
Query: 109 KDSWPRDGILRVEILRN 125
+ W R GI+R+E++RN
Sbjct: 132 QADWIRKGIVRIEVVRN 148
>U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical
protein C02F12.8 protein.
Length = 687
Score = 35.1 bits (77), Expect = 0.092
Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 191 HEDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSS--SIWEGILGLVEDIDKD 248
+E E S + E +D +D+ E LDL+ T++ E +E S S+ E V ++ D
Sbjct: 348 NEPEPYSSTMSEMPPLDDVDDIMENLDLSKTLIEPETLEHSDNMSVVEIKSEPVSEMTTD 407
Query: 249 SKLIDESLDES 259
S ++D+ D S
Sbjct: 408 SLIVDDDRDTS 418
>Z92789-8|CAB07222.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 32.3 bits (70), Expect = 0.65
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 200 IVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDESLDES 259
+V++ +D+T DV E+D T + G D + +W + L+ + + + + LDE
Sbjct: 278 MVKSGQMDET-DVQAEVD--TFMFEGHDTTSTGLMWA--IHLLGNHPEVQRKVQAELDEV 332
Query: 260 AANESSKDDDYILEYSLEYGFLRLSPSARLRLKIPVKIVTLDPQRDQCFG 309
+ D+D +E+ +L + LRL V I+T + DQ G
Sbjct: 333 MGD----DEDVTIEHLSRMKYLECALKEALRLFPSVPIITRELSDDQVIG 378
>Z68336-9|CAA92741.3| 495|Caenorhabditis elegans Hypothetical
protein H02I12.8 protein.
Length = 495
Score = 32.3 bits (70), Expect = 0.65
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 200 IVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDESLDES 259
+V++ +D+T DV E+D T + G D + +W + L+ + + + + LDE
Sbjct: 278 MVKSGQMDET-DVQAEVD--TFMFEGHDTTSTGLMWA--IHLLGNHPEVQRKVQAELDEV 332
Query: 260 AANESSKDDDYILEYSLEYGFLRLSPSARLRLKIPVKIVTLDPQRDQCFG 309
+ D+D +E+ +L + LRL V I+T + DQ G
Sbjct: 333 MGD----DEDVTIEHLSRMKYLECALKEALRLFPSVPIITRELSDDQVIG 378
>U49830-13|AAK31474.1| 826|Caenorhabditis elegans Hypothetical
protein C33F10.2 protein.
Length = 826
Score = 32.3 bits (70), Expect = 0.65
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 3/59 (5%)
Query: 242 VEDIDKDSKLIDESLDESAANESSKDDDYILEYSLEYGFLRLSP---SARLRLKIPVKI 297
+EDI K L DESL+ + +E S DY+ ++ +GFL L+ + R K+ VK+
Sbjct: 77 LEDILKTGNLKDESLNNNFYSEISSALDYLHTRNIVHGFLHLNSIYITDRKNQKLSVKL 135
>AC006720-7|AAF60444.1| 511|Caenorhabditis elegans Cytochrome p450
family protein 31A3 protein.
Length = 511
Score = 32.3 bits (70), Expect = 0.65
Identities = 28/110 (25%), Positives = 51/110 (46%), Gaps = 9/110 (8%)
Query: 200 IVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDESLDES 259
+V++ +D+T DV E+D T + G D + +W + L+ + + + + LDE
Sbjct: 294 MVKSGQMDET-DVQAEVD--TFMFEGHDTTSTGLMWA--IHLLGNHPEVQRKVQAELDEV 348
Query: 260 AANESSKDDDYILEYSLEYGFLRLSPSARLRLKIPVKIVTLDPQRDQCFG 309
+ D+D +E+ +L + LRL V I+T + DQ G
Sbjct: 349 MGD----DEDVTIEHLSRMKYLECALKEALRLFPSVPIITRELSDDQVIG 394
>AF134186-1|AAD55361.1| 1359|Caenorhabditis elegans XNP-1 protein.
Length = 1359
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 192 EDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKL 251
+ EDT+ I++ EE DL T D P + W LGLV++ D+D
Sbjct: 890 DGEDTAMAILQDGIRQSKRLAGEEADLRDT-----DTPPEYTGWFARLGLVKEEDRDDFA 944
Query: 252 IDESL 256
+ L
Sbjct: 945 LSNKL 949
>AF000196-11|AAC24256.1| 1359|Caenorhabditis elegans Human xnp gene
related protein 1 protein.
Length = 1359
Score = 30.3 bits (65), Expect = 2.6
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 5/65 (7%)
Query: 192 EDEDTSQGIVETSYVDKTEDVNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKL 251
+ EDT+ I++ EE DL T D P + W LGLV++ D+D
Sbjct: 890 DGEDTAMAILQDGIRQSKRLAGEEADLRDT-----DTPPEYTGWFARLGLVKEEDRDDFA 944
Query: 252 IDESL 256
+ L
Sbjct: 945 LSNKL 949
>Z66514-5|CAA91344.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 6.0
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 187 ITRIHEDEDTSQGIVETSYVDKTEDVNEELD-LNTTIVSG-EDVEPSSSIWEGILGLVED 244
I+ I + + ++ +E S +K+E + E++D L +G ED++ WE + +
Sbjct: 291 ISEITKQMEAAKKELEASEKEKSE-LREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAK 349
Query: 245 IDKDSKLIDESLDESAANESSKDDDYILEYSLEYGFLR 282
+D KL E L + E++K+D ++E G R
Sbjct: 350 STEDEKLAREQL--AGELENAKEDLKVVEEEKHTGIQR 385
>Z34801-9|CAA84332.1| 1133|Caenorhabditis elegans Hypothetical
protein F59A2.6 protein.
Length = 1133
Score = 29.1 bits (62), Expect = 6.0
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 5/98 (5%)
Query: 187 ITRIHEDEDTSQGIVETSYVDKTEDVNEELD-LNTTIVSG-EDVEPSSSIWEGILGLVED 244
I+ I + + ++ +E S +K+E + E++D L +G ED++ WE + +
Sbjct: 291 ISEITKQMEAAKKELEASEKEKSE-LREQMDRLQKVHNAGQEDIQKLQKTWELEMAKIAK 349
Query: 245 IDKDSKLIDESLDESAANESSKDDDYILEYSLEYGFLR 282
+D KL E L + E++K+D ++E G R
Sbjct: 350 STEDEKLAREQL--AGELENAKEDLKVVEEEKHTGIQR 385
>U39849-10|AAA81054.3| 951|Caenorhabditis elegans Glutamate
receptor family (ampa)protein 4 protein.
Length = 951
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 196 TSQGIVETSYVDKTEDVNEELDLNTTIVSGED----VEPSSSIWEGILGLVEDIDKDSKL 251
T + E +D ++ + L N TI+ +D +E S W GI+G ++ + D L
Sbjct: 424 TGENQYEGFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDESGRWNGIIGALQRHEADLSL 483
Query: 252 IDESLDESAA 261
++ S A
Sbjct: 484 SAVTITYSRA 493
>AF318608-1|AAK01096.1| 409|Caenorhabditis elegans ionotropic
glutamate receptor GLR-4 protein.
Length = 409
Score = 29.1 bits (62), Expect = 6.0
Identities = 18/70 (25%), Positives = 32/70 (45%), Gaps = 4/70 (5%)
Query: 196 TSQGIVETSYVDKTEDVNEELDLNTTIVSGED----VEPSSSIWEGILGLVEDIDKDSKL 251
T + E +D ++ + L N TI+ +D +E S W GI+G ++ + D L
Sbjct: 13 TGENQYEGFCIDLLNEMTQVLKFNYTIIEVQDGTYGIEDESGRWNGIIGALQRHEADLSL 72
Query: 252 IDESLDESAA 261
++ S A
Sbjct: 73 SAVTITYSRA 82
>U58752-1|AAB00664.1| 377|Caenorhabditis elegans P38 map kinase
family protein 1 protein.
Length = 377
Score = 28.7 bits (61), Expect = 8.0
Identities = 19/56 (33%), Positives = 28/56 (50%), Gaps = 5/56 (8%)
Query: 204 SYVDKTED-VNEELDLNTTIVSGEDVEPSSSIWEGILGLVEDIDKDSKLIDESLDE 258
+Y D+T++ + EE+DLN + + E IWE I D K+ DE DE
Sbjct: 321 AYHDETDEPIAEEMDLNDDVRADTIDEWKKIIWEEI----SDFQKNVAFADEEEDE 372
Database: celegans
Posted date: Oct 5, 2007 11:13 AM
Number of letters in database: 12,573,161
Number of sequences in database: 27,539
Lambda K H
0.320 0.138 0.409
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,358,989
Number of Sequences: 27539
Number of extensions: 372849
Number of successful extensions: 1178
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 1171
Number of HSP's gapped (non-prelim): 15
length of query: 412
length of database: 12,573,161
effective HSP length: 83
effective length of query: 329
effective length of database: 10,287,424
effective search space: 3384562496
effective search space used: 3384562496
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 61 (28.7 bits)
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