Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001928-TA|BGIBMGA001928-PA|IPR002078|Sigma-54 factor,
interaction region, IPR003577|Ras small GTPase, Ras type,
IPR003579|Ras small GTPase, Rab type, IPR003578|Ras small GTPase, Rho
type, IPR002041|GTP-binding nuclear protein Ran, IPR001806|Ras GTPase,
IPR005225|Small GTP-binding protein domain, IPR013753|Ras
(214 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_10811| Best HMM Match : Ras (HMM E-Value=0) 188 2e-48
SB_27557| Best HMM Match : Ras (HMM E-Value=0) 180 6e-46
SB_4971| Best HMM Match : Ras (HMM E-Value=0) 175 2e-44
SB_13045| Best HMM Match : Ras (HMM E-Value=0) 172 2e-43
SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.) 164 4e-41
SB_50855| Best HMM Match : Ras (HMM E-Value=0) 160 7e-40
SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.) 152 2e-37
SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.) 151 6e-37
SB_36483| Best HMM Match : Ras (HMM E-Value=0) 144 5e-35
SB_28695| Best HMM Match : Ras (HMM E-Value=0) 143 9e-35
SB_7589| Best HMM Match : Ras (HMM E-Value=0) 140 8e-34
SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.) 134 4e-32
SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.) 132 2e-31
SB_50523| Best HMM Match : Ras (HMM E-Value=0) 127 6e-30
SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34) 127 6e-30
SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.) 126 1e-29
SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22) 120 7e-28
SB_44625| Best HMM Match : Ras (HMM E-Value=0) 120 9e-28
SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.) 118 4e-27
SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42) 111 3e-25
SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44) 111 6e-25
SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30) 111 6e-25
SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.) 104 6e-23
SB_53183| Best HMM Match : Ras (HMM E-Value=0) 103 1e-22
SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30) 103 1e-22
SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21) 102 3e-22
SB_8315| Best HMM Match : Ras (HMM E-Value=0) 99 2e-21
SB_54971| Best HMM Match : Ras (HMM E-Value=0) 90 1e-18
SB_6223| Best HMM Match : Ras (HMM E-Value=0) 89 3e-18
SB_47462| Best HMM Match : Ras (HMM E-Value=0) 87 1e-17
SB_1071| Best HMM Match : Ras (HMM E-Value=0) 86 2e-17
SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.) 85 3e-17
SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40) 83 1e-16
SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35) 83 1e-16
SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09) 82 4e-16
SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.) 81 7e-16
SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.) 79 4e-15
SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.) 77 1e-14
SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05) 76 3e-14
SB_11841| Best HMM Match : Ras (HMM E-Value=0) 72 3e-13
SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11) 71 6e-13
SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09) 71 1e-12
SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.) 70 2e-12
SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.) 67 1e-11
SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17) 66 2e-11
SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31) 66 2e-11
SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31) 62 3e-10
SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08) 59 2e-09
SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05) 58 4e-09
SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10) 58 7e-09
SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 1e-08
SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13) 55 5e-08
SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.) 55 5e-08
SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07) 54 7e-08
SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35) 54 1e-07
SB_52990| Best HMM Match : No HMM Matches (HMM E-Value=.) 53 2e-07
SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19) 52 3e-07
SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 4e-07
SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13) 52 5e-07
SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32) 51 6e-07
SB_57342| Best HMM Match : Arf (HMM E-Value=0) 51 6e-07
SB_43575| Best HMM Match : Sina (HMM E-Value=0) 51 6e-07
SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15) 51 8e-07
SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13) 51 8e-07
SB_11757| Best HMM Match : Ras (HMM E-Value=0) 50 1e-06
SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06) 50 2e-06
SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045) 50 2e-06
SB_53421| Best HMM Match : Arf (HMM E-Value=0) 49 3e-06
SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.) 48 6e-06
SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.) 47 1e-05
SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21) 47 1e-05
SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05) 46 2e-05
SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049) 46 2e-05
SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048) 45 5e-05
SB_11310| Best HMM Match : Arf (HMM E-Value=0) 44 7e-05
SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.) 44 1e-04
SB_56255| Best HMM Match : Arf (HMM E-Value=0) 44 1e-04
SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.) 43 2e-04
SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.) 42 3e-04
SB_8139| Best HMM Match : Ras (HMM E-Value=0.02) 42 4e-04
SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12) 42 5e-04
SB_31439| Best HMM Match : Ras (HMM E-Value=4.7) 42 5e-04
SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32) 41 7e-04
SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.) 40 0.001
SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31) 40 0.002
SB_37042| Best HMM Match : Arf (HMM E-Value=0) 39 0.003
SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36) 39 0.004
SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35) 37 0.011
SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07) 37 0.011
SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21) 36 0.025
SB_7588| Best HMM Match : DcpS (HMM E-Value=0) 36 0.025
SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.044
SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10) 35 0.044
SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.) 35 0.059
SB_39298| Best HMM Match : Ras (HMM E-Value=0.11) 33 0.14
SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05) 33 0.14
SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.) 33 0.18
SB_45581| Best HMM Match : Ras (HMM E-Value=0.069) 33 0.18
SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37) 33 0.18
SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7) 32 0.41
SB_35649| Best HMM Match : M (HMM E-Value=6e-09) 31 0.55
SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20) 31 0.72
SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05) 31 0.95
SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06) 31 0.95
SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8) 31 0.95
SB_18358| Best HMM Match : Arf (HMM E-Value=0) 31 0.95
SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 30 1.3
SB_51210| Best HMM Match : rve (HMM E-Value=2.2e-13) 30 1.3
SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45) 30 1.3
SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 1.7
SB_36609| Best HMM Match : Ion_trans_2 (HMM E-Value=1.7e-13) 30 1.7
SB_12307| Best HMM Match : Death (HMM E-Value=0.00097) 30 1.7
SB_37902| Best HMM Match : RPH3A_effector (HMM E-Value=7.6e-10) 29 2.2
SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.9
SB_16463| Best HMM Match : RhoGAP (HMM E-Value=5.7e-25) 29 3.8
SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11) 28 5.1
SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2) 28 5.1
SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23) 28 5.1
SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8) 28 6.7
SB_46290| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33) 28 6.7
SB_20004| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20) 28 6.7
SB_58620| Best HMM Match : XH (HMM E-Value=1.6) 28 6.7
SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_14238| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.9
SB_54640| Best HMM Match : TolA (HMM E-Value=1.7) 27 8.9
>SB_10811| Best HMM Match : Ras (HMM E-Value=0)
Length = 304
Score = 188 bits (459), Expect = 2e-48
Identities = 88/151 (58%), Positives = 114/151 (75%)
Query: 38 TIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHL 97
TIGVEFG++++ + GK +KLQIWDTAGQE FRS+TRSYYRGAAGALLVYDI+ RETFN L
Sbjct: 127 TIGVEFGSKIVNVGGKSVKLQIWDTAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSL 186
Query: 98 TTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVE 157
T WL DAR ++ N+VI+L+GNK DL++ REV E FA+E+ L+F+ETSA T NVE
Sbjct: 187 TNWLTDARTLASPNIVIILVGNKKDLDADREVTFLEASRFAQENELMFLETSALTGENVE 246
Query: 158 EAFINTAKEIYEKIQEGVFDINNEANGIKIG 188
E F+ ++ I KI+ G D + +GI+ G
Sbjct: 247 EGFLKCSRTILNKIESGELDPDRMGSGIQYG 277
>SB_27557| Best HMM Match : Ras (HMM E-Value=0)
Length = 184
Score = 180 bits (439), Expect = 6e-46
Identities = 87/167 (52%), Positives = 119/167 (71%), Gaps = 2/167 (1%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGK-QIKLQIWD 61
Y Y F+ I+IGD+ VGKS LL QFT+ +F D T+GV+F R++ + G +IKLQIWD
Sbjct: 10 YFYQFRIILIGDSTVGKSSLLRQFTEGQFFENSDPTVGVDFHVRVLELKGDVRIKLQIWD 69
Query: 62 TAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ-HSNSNMVIMLIGNK 120
TAGQE FRSIT SYYR G L++YDIT R++F ++ W ++A+Q + +V ML+G+K
Sbjct: 70 TAGQERFRSITYSYYRNTVGCLIIYDITNRDSFVNVMDWYKEAKQCVEEAEVVFMLVGHK 129
Query: 121 SDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 167
D ES+R V EEGE FA H ++F+ETSAK N+EEAFI+ A+E+
Sbjct: 130 IDKESKRVVSTEEGECFAEAHNMMFIETSAKVLCNIEEAFISVAEEV 176
>SB_4971| Best HMM Match : Ras (HMM E-Value=0)
Length = 209
Score = 175 bits (427), Expect = 2e-44
Identities = 83/169 (49%), Positives = 113/169 (66%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y YLFK ++IGD+GVGKS LLL+F D F + TIGV+F R +T+DGK IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSSLLLRFADDTFSNTYISTIGVDFKIRTLTVDGKTIKLQIWDT 64
Query: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FR++T +YYR A G +L+YD+ ETF HL+ WLE+ +++ + +L+GNK D
Sbjct: 65 AGQERFRTLTTAYYRSAHGIVLIYDVNESETFLHLSQWLEEVSEYACEGVNTILVGNKCD 124
Query: 123 LESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKI 171
L R+V + FA + + F+ETSAK + NVE F A E+ K+
Sbjct: 125 LIDCRQVGYNTAKEFAEKLDISFIETSAKDSTNVESVFRTMAAELKAKL 173
>SB_13045| Best HMM Match : Ras (HMM E-Value=0)
Length = 629
Score = 172 bits (418), Expect = 2e-43
Identities = 77/151 (50%), Positives = 107/151 (70%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y YL+K ++IGD+GVGKS LL +FT F TIGVEF R I ++GK IK Q+WDT
Sbjct: 9 YDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDT 68
Query: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE +R+IT +YYRGA GA+LVYD+T+++TF + WL + R+H++ +V+ML+GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCD 128
Query: 123 LESRREVKKEEGEAFAREHGLVFMETSAKTA 153
L+ R V ++ + + EHGL F+E SA A
Sbjct: 129 LKHLRAVASDDAKKYGDEHGLAFIEASALDA 159
>SB_22342| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 778
Score = 164 bits (399), Expect = 4e-41
Identities = 86/190 (45%), Positives = 121/190 (63%), Gaps = 21/190 (11%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFT---------------------DKRFQPVHDLTIGV 41
Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFALSLAQKLLLFRIYSHPTLSQQDDTYTESYISTIGV 64
Query: 42 EFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWL 101
+F R I +DGK IKLQIWDTAGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL
Sbjct: 65 DFKIRTIELDGKTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWL 124
Query: 102 EDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFI 161
++ +++ N+ +L+GNK DL +++ V + +A G+ F+ETSAK A NVE+AF+
Sbjct: 125 QEIDRYACENVNKLLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFM 184
Query: 162 NTAKEIYEKI 171
A EI ++
Sbjct: 185 TMAAEIKNRM 194
>SB_50855| Best HMM Match : Ras (HMM E-Value=0)
Length = 733
Score = 160 bits (389), Expect = 7e-40
Identities = 70/160 (43%), Positives = 111/160 (69%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
FK +++G++ VGKS L+L+F +F + TIG F + + +D +K +IWDTAGQE
Sbjct: 22 FKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQE 81
Query: 67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 126
+ S+ YYRGA A++VYDIT ++TF TW+++ ++ ++ N+VI L GNK+DL S+
Sbjct: 82 RYHSLAPMYYRGAQAAIVVYDITNQDTFARAKTWVKELQRQASPNIVIALSGNKADLASK 141
Query: 127 REVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKE 166
R V+ E+ +++A ++GL+FMETSAKTA NV + F+ K+
Sbjct: 142 RMVEYEDAQSYAEDNGLLFMETSAKTAMNVNDIFLAIGKK 181
>SB_24842| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 156
Score = 152 bits (369), Expect = 2e-37
Identities = 66/149 (44%), Positives = 100/149 (67%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y+YLFK I++GD VGK+CL+ QFT F P TIGV+F + + +DG+++KLQIWDT
Sbjct: 4 YSYLFKIILVGDANVGKTCLVRQFTKGYFPPNQGPTIGVDFTIKTVDVDGEKVKLQIWDT 63
Query: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE FRSIT+SYY A G ++ YDIT +++F L WL+D ++++ +++I ++GNKSD
Sbjct: 64 AGQERFRSITQSYYHNADGVIVTYDITNKKSFESLPQWLDDTNRYTSKDVLIAIVGNKSD 123
Query: 123 LESRREVKKEEGEAFAREHGLVFMETSAK 151
L + R+V + ++ L+ K
Sbjct: 124 LSTNRKVDFHHAKLLLKKKTLLHWRRQLK 152
>SB_17958| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 271
Score = 151 bits (365), Expect = 6e-37
Identities = 73/174 (41%), Positives = 110/174 (63%), Gaps = 1/174 (0%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Y FK +++GD GVGK+ L+ +FT F T+GV+ G R++ I G ++KLQ WDTAG
Sbjct: 10 YSFKVLVVGDPGVGKTSLIRRFTKGYFCDNSSSTVGVDVGTRVLDIHGDRVKLQCWDTAG 69
Query: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
QE FR IT+SYYR A +LV+DIT R TF + WL + ++++N N++ +L+GNK+DL+
Sbjct: 70 QEKFRGITQSYYRNADAVILVFDITNRGTFASIPQWLMNVQKYTNKNILKVLVGNKTDLK 129
Query: 125 -SRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFD 177
+ R+V A L+++ETSAK NVE A+++ E + VF+
Sbjct: 130 GASRKVNTRSAANLAEFEELLYLETSAKWDDNVEVLIAELAEQLRENAKNRVFE 183
>SB_36483| Best HMM Match : Ras (HMM E-Value=0)
Length = 213
Score = 144 bits (349), Expect = 5e-35
Identities = 68/170 (40%), Positives = 115/170 (67%), Gaps = 2/170 (1%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Y+FK +++GD VGKS L+ +F D F TIGV+F +DGK++KLQ+WDTAG
Sbjct: 9 YVFKVLVLGDCNVGKSSLIRRFHDDEFNAQLCTTIGVDFFIHDFDLDGKKVKLQLWDTAG 68
Query: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHSNSNMVIMLIGNKSDL 123
+E +R+++RS++RGA GALLV+D++ +E+F+ + WL + + S S+ + +L+GNK D
Sbjct: 69 EEKYRALSRSFFRGADGALLVFDVSVKESFDSIRDYWLHEFHKVSGSDTITILVGNKCDK 128
Query: 124 ESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQE 173
+ ++ V +E+ + + + L ++ETSAK NV EAF A+++ E +++
Sbjct: 129 KDKK-VSEEDIQNLSSCYNLSWLETSAKDNTNVNEAFEAMARKLVENLEQ 177
>SB_28695| Best HMM Match : Ras (HMM E-Value=0)
Length = 1058
Score = 143 bits (347), Expect = 9e-35
Identities = 67/163 (41%), Positives = 104/163 (63%), Gaps = 3/163 (1%)
Query: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65
+FK + IGD+GVGKS L +F +++P TIGV+F + + ++G+ I +Q+WDTAGQ
Sbjct: 896 VFKVVFIGDSGVGKSSFLHRFCHDQWKPSFTATIGVDFQIKTMNVNGQCIAIQLWDTAGQ 955
Query: 66 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDL-- 123
E FRSIT+ Y+R A G L+ YD+T +F +L W+ + + + M++GNK+DL
Sbjct: 956 ERFRSITKQYFRKADGILIFYDVTAESSFTNLKKWMVSVEEGAEEGVAKMVLGNKTDLAE 1015
Query: 124 -ESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAK 165
E R VK +G+ A ++ ++METSAKT N++EA A+
Sbjct: 1016 DEESRVVKTIDGKNLANQYDALYMETSAKTGNNIQEAMYKLAE 1058
>SB_7589| Best HMM Match : Ras (HMM E-Value=0)
Length = 640
Score = 140 bits (339), Expect = 8e-34
Identities = 74/189 (39%), Positives = 111/189 (58%), Gaps = 12/189 (6%)
Query: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65
+FK ++ GD VGKS +L+ RF + T+GV+F + + +DGK LQ+WDTAGQ
Sbjct: 442 MFKIVLAGDAAVGKSSFILRLCRNRFHSALNSTLGVDFQMKTLVVDGKTYALQLWDTAGQ 501
Query: 66 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDL-- 123
E FRSI +SY+R A G LL+YD+T +F + W+E + + + IML GNK D+
Sbjct: 502 ERFRSIAKSYFRKADGVLLLYDVTCETSFLDVRDWVEAIEESCSKPVPIMLCGNKIDIRQ 561
Query: 124 ----ESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDIN 179
E++ + E G A+EHG +F+ETS+K N+ EA I A+ + + V DI
Sbjct: 562 SAAAENKTVITAESGSRLAKEHGALFIETSSKENKNIAEACIELARMLRD-----VEDIE 616
Query: 180 -NEANGIKI 187
+ NG+K+
Sbjct: 617 VKQNNGMKL 625
>SB_32061| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 919
Score = 134 bits (325), Expect = 4e-32
Identities = 63/119 (52%), Positives = 83/119 (69%), Gaps = 1/119 (0%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
K +I+G++GVGKS LLL+FTD F P TIGV+F + +T++G + KL IWDTAGQE
Sbjct: 10 KILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQER 69
Query: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHS-NSNMVIMLIGNKSDLES 125
FR++T SYYRGA G +LVYD RETF+ L WL + +S ++V ML+GNK D S
Sbjct: 70 FRTLTPSYYRGAQGVILVYDTNSRETFDKLEEWLNEVEMYSTKKDIVKMLVGNKIDKHS 128
>SB_3743| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 365
Score = 132 bits (319), Expect = 2e-31
Identities = 63/161 (39%), Positives = 96/161 (59%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
K + +GD GVGKS L +F F+ + TIG++F + + +D +++LQIWDTAGQE
Sbjct: 165 KIVFLGDQGVGKSSLAGRFIYDIFEEKYQPTIGIDFMTKTVLLDDFEVRLQIWDTAGQER 224
Query: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRR 127
FR + SY R + AL+V+DIT +F + W++ R VI+++GNK D RR
Sbjct: 225 FRCLIHSYIRDSEAALIVFDITNYTSFESVGDWVKMVRDERGEKAVIIIVGNKMDESDRR 284
Query: 128 EVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIY 168
+V + E A GL ++ETSAK+ NV+ F +K++Y
Sbjct: 285 KVSYDVAEKSAERLGLSYVETSAKSGYNVKLLFTKLSKDLY 325
>SB_50523| Best HMM Match : Ras (HMM E-Value=0)
Length = 154
Score = 127 bits (307), Expect = 6e-30
Identities = 56/135 (41%), Positives = 89/135 (65%)
Query: 52 GKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSN 111
GK+IKLQIWDTAGQE F +IT +YYRGA G +LVYD+T ++F++++ WL+ H+N +
Sbjct: 2 GKKIKLQIWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISKWLKKIDDHANED 61
Query: 112 MVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKI 171
+ ML+GNK D+ +R + + +GE A +G+ F+ETSA + NVE++F+ ++I +
Sbjct: 62 VKRMLVGNKCDMYDKRVISQTKGEQLASSYGISFIETSALSNINVEKSFVVLTEDILNAV 121
Query: 172 QEGVFDINNEANGIK 186
+ + G K
Sbjct: 122 CPPTVEETEKGKGKK 136
>SB_33743| Best HMM Match : Ras (HMM E-Value=2e-34)
Length = 241
Score = 127 bits (307), Expect = 6e-30
Identities = 60/136 (44%), Positives = 89/136 (65%), Gaps = 1/136 (0%)
Query: 53 KQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNM 112
+ +KLQIWDTAGQE FR+IT+SYYR G ++ YDIT+ +TF ++ W ED ++++ N
Sbjct: 93 QDVKLQIWDTAGQERFRTITQSYYRSCNGVIIAYDITKCDTFKNVIRWGEDVQKYAPENA 152
Query: 113 VIMLIGNKSDLESRREVKKEEGEAFAREHGLV-FMETSAKTAANVEEAFINTAKEIYEKI 171
+ +L+GNK DLE REV E+ A +G++ +ETSAK A N+E AF A+E+ +
Sbjct: 153 IKLLVGNKKDLEREREVSLEDAVNCASHYGMLDVLETSAKDATNIEAAFYRLARELKNRC 212
Query: 172 QEGVFDINNEANGIKI 187
+EG N + GI +
Sbjct: 213 EEGSGLENIDDGGITL 228
>SB_24843| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 265
Score = 126 bits (305), Expect = 1e-29
Identities = 67/157 (42%), Positives = 92/157 (58%), Gaps = 2/157 (1%)
Query: 4 AYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTA 63
A FK IIIGD+ VGK+CL + +F + TIGV+F + + ++G+ +KLQ+WDTA
Sbjct: 44 AKTFKIIIIGDSNVGKTCLAYRLCTGKFPERTETTIGVDFWEKSLELNGEFVKLQLWDTA 103
Query: 64 GQEAFR-SITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMV-IMLIGNKS 121
GQE FR S+ YYR + +YDITR+ +F LTTW+ + R H+ S V +LIGNK
Sbjct: 104 GQERFRKSMVCHYYRNVNAVVFMYDITRKCSFEALTTWIVEYRHHAYSGDVPKILIGNKC 163
Query: 122 DLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEE 158
DL R V FA H + E S K A +E+
Sbjct: 164 DLGLERTVSSNIARKFADSHNMPLWEISIKNDAELEQ 200
>SB_38511| Best HMM Match : Ras (HMM E-Value=1.2e-22)
Length = 159
Score = 120 bits (290), Expect = 7e-28
Identities = 54/119 (45%), Positives = 84/119 (70%)
Query: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
QE +R+IT +YYRGA GA+LVYDI + +F +L W+E+ RQH++ ++ I+LIGNKSDL+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 125 SRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEAN 183
R ++ G+ FA EHG++FMETSA + NV EAF I++K+++ + + +A+
Sbjct: 62 HLRMIENRRGKQFAAEHGMLFMETSALDSTNVAEAFEFIFAHIFDKVRQNELEKSGQAH 120
>SB_44625| Best HMM Match : Ras (HMM E-Value=0)
Length = 128
Score = 120 bits (289), Expect = 9e-28
Identities = 56/121 (46%), Positives = 83/121 (68%), Gaps = 1/121 (0%)
Query: 38 TIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHL 97
TIGV+F R I IDG+++KLQIWDTAGQE FR+IT +YYRG G ++VYD+T +TF ++
Sbjct: 9 TIGVDFKIRTINIDGEKVKLQIWDTAGQERFRTITSTYYRGTHGVIVVYDVTSADTFVNV 68
Query: 98 TTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVE 157
WL + Q+ + +++ +L+GNK D S++ V+ + + F + + ETSAK NVE
Sbjct: 69 KRWLHEIDQNCD-DVIRILVGNKDDCPSKKVVETADLQKFGEQMNIRVFETSAKENINVE 127
Query: 158 E 158
E
Sbjct: 128 E 128
>SB_48712| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 410
Score = 118 bits (284), Expect = 4e-27
Identities = 65/159 (40%), Positives = 96/159 (60%), Gaps = 6/159 (3%)
Query: 14 DTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITR 73
D GVGKS L+ +F +F TIGVEF + + +DG+ LQIWDTAGQE F+S+
Sbjct: 219 DGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDTAGQERFKSLRT 278
Query: 74 SYYRGAAGALLVYDITRRETFNHLTTWLED----ARQHSNSNMVIMLIGNKSDLESRREV 129
+YRG+ LLVY + ++F +L+ W ++ A N +L+GNK D+E R V
Sbjct: 279 PFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQDNFPFILLGNKVDVEG-RAV 337
Query: 130 KKEEGEAFAREHGLV-FMETSAKTAANVEEAFINTAKEI 167
+EE +++ R++G V + ETSAK + NV +AFI K +
Sbjct: 338 SQEEADSWCRQNGGVPYFETSAKDSTNVNDAFIAAVKRL 376
>SB_41076| Best HMM Match : Ras (HMM E-Value=1.90016e-42)
Length = 704
Score = 111 bits (268), Expect = 3e-25
Identities = 65/161 (40%), Positives = 93/161 (57%), Gaps = 6/161 (3%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGA---RMITIDGKQIKLQIWD 61
Y FK +IIG++GVGKSCL+ + + F + +T V D K+IKL I D
Sbjct: 349 YEFKTLIIGNSGVGKSCLVNKLKNPHFD-LKFVTSTVSMNDIFWEYFLYDNKKIKLTIGD 407
Query: 62 TAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHS--NSNMVIMLIGN 119
TAGQE + SI +Y+RG G LV+DIT TF L W++ AR S +SN+ ++L+GN
Sbjct: 408 TAGQERYFSILPAYFRGVQGVFLVFDITVEITFLQLHRWIDLARTTSGADSNIQLILVGN 467
Query: 120 KSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAF 160
K D+E R V + FA +G ++ETSAK ++ + F
Sbjct: 468 KKDMEDNRAVTYSRAKEFAAMNGFPYIETSAKDVDSLMDMF 508
>SB_58218| Best HMM Match : Ras (HMM E-Value=1.4013e-44)
Length = 212
Score = 111 bits (266), Expect = 6e-25
Identities = 58/179 (32%), Positives = 99/179 (55%), Gaps = 4/179 (2%)
Query: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65
LFK +++G+ GVGK+ L + + F P TIG++ ++ + I KQ+ L +WDTAG
Sbjct: 11 LFKVVLLGEAGVGKTSLFYRLKENHFTPGRRNTIGIDSCSKFVKIGEKQVTLSVWDTAGV 70
Query: 66 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLES 125
E FR++T++YYRGA +L++++ + +L W+ D + + + L+ NK DL+
Sbjct: 71 ERFRTVTKNYYRGAHACILMFNVDDPGSLQYLLHWIHDTDEFCPDALKV-LVANKIDLD- 128
Query: 126 RREVKKEEGEAFAREHGL-VFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEAN 183
+V E E FA H + SAKT + +A AK + + +E D +NE++
Sbjct: 129 -EQVTTESVELFASSHECHLTFRISAKTGEGIGKACTQIAKALLRENKELEDDSHNESS 186
>SB_8803| Best HMM Match : Ras (HMM E-Value=7.9e-30)
Length = 517
Score = 111 bits (266), Expect = 6e-25
Identities = 50/102 (49%), Positives = 76/102 (74%), Gaps = 1/102 (0%)
Query: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGN 119
W+ AGQE FR+IT SYYRGA G ++VYDIT+RE++N+L WL + +++ + ++L+GN
Sbjct: 374 WE-AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVHMILVGN 432
Query: 120 KSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFI 161
K DL++ REV+ + + +A H + F+ETSAK A NV+EAF+
Sbjct: 433 KIDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAFL 474
>SB_34767| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 216
Score = 104 bits (249), Expect = 6e-23
Identities = 61/178 (34%), Positives = 95/178 (53%), Gaps = 7/178 (3%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIT-IDGKQIKLQIWD 61
Y FK +++GD GK + ++ + + P++ TIGV+F + I I+LQIW
Sbjct: 15 YTRNFKVLVVGDILTGKQSFVKRYVNNIWHPLYKPTIGVDFALKTIQWAQNTTIRLQIWL 74
Query: 62 TAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDA----RQHSNSNMVIMLI 117
AGQE F S+TR YY+GA ++++D+ R+ T + W +D + HS + +L+
Sbjct: 75 IAGQERFSSMTRVYYKGADACVVLFDLERQTTLDGAIKWKKDLDSKYKLHSRKPVPCILV 134
Query: 118 GNKSDLESRREVKKEEGEAFAREHG-LVFMETSAKTAANVEEAFINTAKEIYEKIQEG 174
GNKSDL R V KE + +EH L + E S K NV++ K + E +EG
Sbjct: 135 GNKSDLPD-RPVDKEIIDKLCKEHSFLCWTEMSVKEDINVKKPMEYLVKHLMEDGKEG 191
>SB_53183| Best HMM Match : Ras (HMM E-Value=0)
Length = 834
Score = 103 bits (247), Expect = 1e-22
Identities = 47/108 (43%), Positives = 76/108 (70%), Gaps = 1/108 (0%)
Query: 79 AAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFA 138
A G +LVYDIT+ +TF++++ WL + +H+N ++ M++GNK D++ RR V +E GE A
Sbjct: 125 AEGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKCDMDDRRIVSRERGEQIA 184
Query: 139 REHGLVFMETSAKTAANVEEAFINTAKEIYEK-IQEGVFDINNEANGI 185
REHG+ F+ETSAKT N+E+AF A++I +K + + + +N +GI
Sbjct: 185 REHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSEEPSNNIHGI 232
Score = 46.4 bits (105), Expect = 2e-05
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTI 39
+Y YLFK ++IGD+GVGK+C+L +F+D F TI
Sbjct: 5 SYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTI 42
>SB_39864| Best HMM Match : Ras (HMM E-Value=1.6e-30)
Length = 421
Score = 103 bits (246), Expect = 1e-22
Identities = 48/114 (42%), Positives = 71/114 (62%)
Query: 47 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ 106
M+ ++ K K IWDTAGQE F+S+ YYR AA A+LVYDIT TF+ L W+ + ++
Sbjct: 1 MMIVNDKAYKFNIWDTAGQERFKSLAPLYYRDAAAAILVYDITIESTFHSLRPWIRELQR 60
Query: 107 HSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAF 160
+ ++VI + GNK D +R+V+ ++ + FA +F ETSA T+ NV F
Sbjct: 61 YGPQDIVIAVAGNKCDKADQRDVQVQDAQDFAGSVDAIFAETSALTSKNVHWLF 114
>SB_33745| Best HMM Match : Ras (HMM E-Value=2.5e-21)
Length = 115
Score = 102 bits (244), Expect = 3e-22
Identities = 43/92 (46%), Positives = 65/92 (70%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
+ Y+FK +IIG++ VGK+ L ++ D F T+G++F + + + K++KLQIWDT
Sbjct: 18 FDYMFKLLIIGNSAVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRVKLQIWDT 77
Query: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETF 94
AGQE +R+IT +YYRGA G +L+YDIT E+F
Sbjct: 78 AGQERYRTITTAYYRGAMGFILMYDITNEESF 109
>SB_8315| Best HMM Match : Ras (HMM E-Value=0)
Length = 565
Score = 99.1 bits (236), Expect = 2e-21
Identities = 46/115 (40%), Positives = 73/115 (63%), Gaps = 11/115 (9%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI-----------TIDGK 53
+L K++ +GD+GVGK+ LL Q+TD F P TIG++F + + + G+
Sbjct: 105 FLIKFLALGDSGVGKTSLLYQYTDSHFNPRFVPTIGIDFREKRVVHHPLNPDGERSTRGQ 164
Query: 54 QIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHS 108
+I LQ+WDTAGQE FRS+T +++R A G LLV+D+T ++F ++ WL + H+
Sbjct: 165 RIHLQLWDTAGQERFRSLTTAFFRDAMGFLLVFDLTHEQSFVNIRNWLSQLQTHA 219
Score = 42.3 bits (95), Expect = 3e-04
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 115 MLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEA 159
+L+GNK+DLE R V + E A A GL + ETSA T NV ++
Sbjct: 470 VLLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKS 514
>SB_54971| Best HMM Match : Ras (HMM E-Value=0)
Length = 239
Score = 90.2 bits (214), Expect = 1e-18
Identities = 48/165 (29%), Positives = 86/165 (52%), Gaps = 3/165 (1%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
+ + ++ +GD G GK+ + + F+ + T+GVE + IK +WDT
Sbjct: 29 HCIVVSFLQVGDGGTGKTTFVKRHLTGEFEKKYIATLGVEVHPLIFFTSRGPIKFNVWDT 88
Query: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
AGQE F + YY A++++D+T R T+ ++ W D + N+ I+L GNK D
Sbjct: 89 AGQEKFGGLRDGYYIQGQCAIIMFDVTSRVTYKNVPNWHRDL-ERVCENIPIVLCGNKVD 147
Query: 123 LESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 167
++ R+ K + F R+ L + + SAK+ N E+ F+ A+++
Sbjct: 148 IKDRK--VKAKAITFHRKKNLQYYDLSAKSNYNFEKPFLWLARKL 190
>SB_6223| Best HMM Match : Ras (HMM E-Value=0)
Length = 1665
Score = 89.0 bits (211), Expect = 3e-18
Identities = 48/135 (35%), Positives = 71/135 (52%), Gaps = 2/135 (1%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
+K +++G GVGKS L +QF F +D TI + + + ID + L I DTAGQE
Sbjct: 12 YKLVVVGGGGVGKSALTIQFIQSHFVSDYDPTIEDSYRKQCV-IDERVAHLDILDTAGQE 70
Query: 67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSNMVIMLIGNKSDLES 125
F ++ Y R G LLV+ +T R +F + + R + +++ GNKSDLE
Sbjct: 71 EFSAMREQYMRSGEGFLLVFSVTDRSSFEEINKFYNQILRVKDRTEFPMIICGNKSDLEY 130
Query: 126 RREVKKEEGEAFARE 140
R V EG+ AR+
Sbjct: 131 ERTVSTAEGQELARQ 145
>SB_47462| Best HMM Match : Ras (HMM E-Value=0)
Length = 385
Score = 87.0 bits (206), Expect = 1e-17
Identities = 49/132 (37%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
+K +++G GVGKS L +QF +F +D TI +F + I +D L+I DTAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-DFYRKEIEVDNNPSILEILDTAGTE 62
Query: 67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTW-LEDARQHSNSNMVIMLIGNKSDLES 125
F S+ Y + G LLVY + R+TF L + R + N+ I+L+GNKSD+
Sbjct: 63 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYD 122
Query: 126 RREVKKEEGEAF 137
REV + F
Sbjct: 123 EREVSTSNAKTF 134
>SB_1071| Best HMM Match : Ras (HMM E-Value=0)
Length = 228
Score = 85.8 bits (203), Expect = 2e-17
Identities = 55/162 (33%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
+K +++G GVGKS L +QF +F +D TI + TAG E
Sbjct: 4 YKVVVLGSGGVGKSALTVQFVTGQFVEKYDPTIE-----------------DFYHTAGTE 46
Query: 67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTW-LEDARQHSNSNMVIMLIGNKSDLES 125
F S+ Y + G LLVY + R+TF L + R + N+ I+L+GNKSD+
Sbjct: 47 QFASMRDLYIKNGQGFLLVYSLINRQTFADLKPMRAQILRVKGSENVPIVLVGNKSDIYD 106
Query: 126 RREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 167
REV E + A G F ETSAKT +NV++ F + +
Sbjct: 107 EREVSVGEAKDLAEAWGCPFYETSAKTRSNVDKVFAEVVRRM 148
>SB_46477| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 6116
Score = 85.4 bits (202), Expect = 3e-17
Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 16/167 (9%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
K +I+GD GK+CLL+ F+ +F V+ T+ + A I +DGKQ++L +WDTAGQE
Sbjct: 5931 KLVIVGDGACGKTCLLIVFSKDQFPEVYVPTVFENYVAD-IEVDGKQVELALWDTAGQED 5989
Query: 68 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDL--- 123
+ + Y L+ + I ++ ++ W + + H N+ I+L+GNK DL
Sbjct: 5990 YDRLRPLSYPDTDVILMCFSIDSPDSLENIPEKWTPEVK-HFCPNVPIILVGNKKDLRMD 6048
Query: 124 -ESRREVKK--------EEGEAFA-REHGLVFMETSAKTAANVEEAF 160
++RE++K EEG A A + ++E SAKT V E F
Sbjct: 6049 ENTKRELQKMKQEPVKIEEGRAMADKISAYAYLECSAKTKDGVREVF 6095
>SB_25972| Best HMM Match : MIF4G (HMM E-Value=4.9e-40)
Length = 1265
Score = 83.4 bits (197), Expect = 1e-16
Identities = 37/70 (52%), Positives = 51/70 (72%)
Query: 75 YYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEG 134
YYRGA GALLVYDI + T+ ++ WL++ R H++SN+VIML+GNKSDL R V +E
Sbjct: 2 YYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEA 61
Query: 135 EAFAREHGLV 144
+AFA + +V
Sbjct: 62 KAFAEIYHIV 71
>SB_39585| Best HMM Match : Ras (HMM E-Value=6e-35)
Length = 145
Score = 83.4 bits (197), Expect = 1e-16
Identities = 45/112 (40%), Positives = 69/112 (61%), Gaps = 6/112 (5%)
Query: 59 IWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED----ARQHSNSNMVI 114
IWDTAGQE F+S+ ++YRGA +LV+D+T+ +F L +W ++ A N
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPF 60
Query: 115 MLIGNKSDLESRREVKKEEGEAFAR-EHGLVFMETSAKTAANVEEAFINTAK 165
+++GNK DLE+ R V + +A+ ++ + + ETSAK A NVE+AF AK
Sbjct: 61 VVLGNKIDLEN-RAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAK 111
>SB_5222| Best HMM Match : Ras (HMM E-Value=2.9e-09)
Length = 181
Score = 81.8 bits (193), Expect = 4e-16
Identities = 35/70 (50%), Positives = 52/70 (74%)
Query: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
QE +R+IT +YYRGA GA+LVYDI + +F +L W+E+ RQH++ ++ I+LIGNKSDL+
Sbjct: 2 QERYRAITSAYYRGAMGAVLVYDIAKGTSFMNLNKWVEELRQHASDDLSIILIGNKSDLK 61
Query: 125 SRREVKKEEG 134
R ++ G
Sbjct: 62 HLRMIENRRG 71
>SB_53792| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 141
Score = 81.0 bits (191), Expect = 7e-16
Identities = 35/95 (36%), Positives = 60/95 (63%)
Query: 81 GALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFARE 140
G LLVYDIT ++F H++ WL++ +++ N+ +L+GNK D E R + + G + +
Sbjct: 4 GILLVYDITTEDSFKHISQWLQNIEDNASPNVCKVLLGNKLDAEDERVIDAQRGRSVGED 63
Query: 141 HGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGV 175
+ L F E SA+T NV++AF+ A++I E+ + V
Sbjct: 64 NNLEFYEASARTGENVQQAFMAVARKIKEQRERQV 98
>SB_42246| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 310
Score = 78.6 bits (185), Expect = 4e-15
Identities = 49/161 (30%), Positives = 77/161 (47%), Gaps = 3/161 (1%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
+ +++G GVGKS LL++F RF +D T+ + + TID L I DTA
Sbjct: 128 YSLVLLGQAGVGKSALLVRFCTGRFIHEYDPTLEMTYDVSA-TIDEDPATLHITDTAS-- 184
Query: 67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESR 126
+ + S G + ++ ET L + + ++ +I+L GNK DL+
Sbjct: 185 TYEPVYLSQNEGFIVVYSINELRTFETAKQLVKLIREIKKQKALTTLIVLAGNKCDLKHC 244
Query: 127 REVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 167
R V ++E FA EH VF ETSA N + F + ++I
Sbjct: 245 RAVSRQEAREFAAEHECVFHETSAANNINTKVIFHDCVRQI 285
>SB_22528| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 467
Score = 77.0 bits (181), Expect = 1e-14
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
K +++GD GVGKS L+ T F + T+ + + I +DGK + +WDTAGQE
Sbjct: 7 KLVVVGDGGVGKSAFLITATTNAFPGEYIPTVFDNYSSN-IMLDGKAYNVGLWDTAGQED 65
Query: 68 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDL--- 123
+ + Y L+ +DI R +F ++ + WL + H I L+GNK DL
Sbjct: 66 YDRLRPLSYPMTDVFLVCFDIGSRTSFENIESKWLPELNHHMPETPKI-LVGNKRDLRSA 124
Query: 124 ---------ESRREVKKEEGEAFAREHGLVFMETSAKTAANVEE 158
SR + EEG+A A+ G+ ++E S+ T V++
Sbjct: 125 QQNTSLSNHRSRDPITYEEGKALAKRLGMQYLENSSLTQDGVKD 168
>SB_29253| Best HMM Match : Ras (HMM E-Value=2.8e-05)
Length = 68
Score = 75.8 bits (178), Expect = 3e-14
Identities = 36/60 (60%), Positives = 41/60 (68%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +DGK IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
>SB_11841| Best HMM Match : Ras (HMM E-Value=0)
Length = 523
Score = 72.1 bits (169), Expect = 3e-13
Identities = 42/134 (31%), Positives = 71/134 (52%), Gaps = 3/134 (2%)
Query: 40 GVEFGARMITIDGK-QIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT 98
GV A + GK + K I DTAGQE + ++ Y R G L V+ + ++F +
Sbjct: 261 GVGHRAHSYSKGGKNKSKTDILDTAGQEEYSAMRDQYMRTGEGFLCVFAVNNSKSFEDIN 320
Query: 99 TWLEDARQHSNSNMV-IMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVE 157
+ E ++ ++ V ++L+GNK DL +R V + + A+ + + F ETSAKT V+
Sbjct: 321 QYREQIKRVKDAEEVPMVLVGNKCDL-PQRTVSTSDAQELAKSYNIPFQETSAKTRQGVD 379
Query: 158 EAFINTAKEIYEKI 171
+AF +EI + +
Sbjct: 380 DAFYTLVREIRKDV 393
>SB_288| Best HMM Match : Ras (HMM E-Value=1.5e-11)
Length = 220
Score = 71.3 bits (167), Expect = 6e-13
Identities = 35/119 (29%), Positives = 65/119 (54%), Gaps = 6/119 (5%)
Query: 48 ITIDGKQIKLQIWDTAGQEAF-----RSITRSYYRGAAGALLVYDITRRETFNHLTTWLE 102
+ + GK + L I DT G+ S YR +GA++V+D+T R++F + TWL+
Sbjct: 10 LELRGKTVHLHIVDTPGESRSVFHLAESTVPLIYRALSGAVIVFDVTDRKSFERVPTWLD 69
Query: 103 DARQHSNSNMVIMLIGNKSDLE-SRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAF 160
++H + ++L+GNK+D + ++ +A +G +++ETSA N++E F
Sbjct: 70 KVQEHCGHEIPVVLVGNKTDRPLNSWKIPSNVAAKYATNNGFLYIETSALGMCNIDEIF 128
>SB_1286| Best HMM Match : Ras (HMM E-Value=2e-09)
Length = 123
Score = 70.5 bits (165), Expect = 1e-12
Identities = 30/72 (41%), Positives = 48/72 (66%)
Query: 93 TFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKT 152
+F + W++D R ++++IML+GNK+DL +R+V EEGE A+E ++F+ETSAK
Sbjct: 13 SFQQTSKWIDDVRTERGNDVIIMLVGNKTDLSDKRQVTAEEGERKAKELNVMFIETSAKA 72
Query: 153 AANVEEAFINTA 164
NV++ F A
Sbjct: 73 GYNVKQLFRRVA 84
>SB_8853| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 76
Score = 69.7 bits (163), Expect = 2e-12
Identities = 32/61 (52%), Positives = 41/61 (67%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL ++T F TIGVE R + I+GK ++ QIWDT
Sbjct: 15 YDYLFKIVLIGDSGVGKSNLLSRYTKNEFHLGSKATIGVELAHRNVEIEGKTVRAQIWDT 74
Query: 63 A 63
A
Sbjct: 75 A 75
>SB_24444| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 268
Score = 66.9 bits (156), Expect = 1e-11
Identities = 35/109 (32%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQH----SNSNMVIMLI-GNKSDLES 125
+ +Y+ GALLVYD+T RE+F L WL++ ++ S+ N V+ ++ NK D
Sbjct: 6 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGSPSDFNSVVFVVCANKVD-SR 64
Query: 126 RREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEG 174
+R V++ EG +A H + ETSA+T + E F + + ++ G
Sbjct: 65 KRLVEESEGRQWAENHKFCYFETSAQTGDGIPEVFQTLFTGVVKALENG 113
>SB_2880| Best HMM Match : Ras (HMM E-Value=3.2e-17)
Length = 134
Score = 66.1 bits (154), Expect = 2e-11
Identities = 35/97 (36%), Positives = 52/97 (53%), Gaps = 1/97 (1%)
Query: 75 YYRGAAGALLVYDITRRETFNHLTTWLEDA-RQHSNSNMVIMLIGNKSDLESRREVKKEE 133
Y R G +++Y IT R +FN + + R ++ I+L+GNK DLE +REV +E
Sbjct: 5 YMRNGEGFIIIYSITDRSSFNLAAQYKDQIERVRRTDDIPIVLVGNKDDLEGKREVTTQE 64
Query: 134 GEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEK 170
G+ A F ETSA V++AF +EI +K
Sbjct: 65 GQELAHRFDCPFFETSACQRHFVDDAFHGLVREIRKK 101
>SB_32162| Best HMM Match : Ras (HMM E-Value=4.7e-31)
Length = 357
Score = 66.1 bits (154), Expect = 2e-11
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 5/136 (3%)
Query: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
MA K ++ GD VGK+ L+ T + E G + + ++ L +W
Sbjct: 1 MASERKLKVVLTGDNNVGKTSFLINLTQNELEGTPTAFANYELG---LEVGSQKFLLDLW 57
Query: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGN 119
DT G + + Y+G+ LL +DI+ R+TF + + WL + Q + + +LIGN
Sbjct: 58 DTEGTTEYDRLRPLTYQGSDIILLCFDISNRQTFERIESKWLPETTQVLPGS-IRVLIGN 116
Query: 120 KSDLESRREVKKEEGE 135
K+D+ R+ K G+
Sbjct: 117 KNDIRKTRQDKDRRGK 132
>SB_56256| Best HMM Match : Ras (HMM E-Value=8.9e-31)
Length = 506
Score = 62.1 bits (144), Expect = 3e-10
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 8/153 (5%)
Query: 10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFR 69
I++GD+ GK+ LL + +F ++ T+ + +DG++I+L +WDT+G E +
Sbjct: 236 ILVGDSECGKTALLNAYVRNQFNEKYEATVFNSLSTA-VEVDGERIELTLWDTSGHEDYD 294
Query: 70 SITRSYYRGAAGALLVYDITRRETFNH-LTTWLEDARQHSNSNMVIMLIGNKSDLESRRE 128
+ Y L+ +DI+R +T + L W+ + N ++L+G K DL S
Sbjct: 295 HVRPLSYNNVDIVLICFDISRPKTADSILEKWIIEVCDLC-PNKPVLLVGCKQDLRSEVN 353
Query: 129 VKKEEGEAFAREHGLVFMETSAKTAANVEEAFI 161
+ + ++ TS + A ++EAF+
Sbjct: 354 IVSKLASKVCQQ-----PVTSLEVPAELKEAFV 381
>SB_1272| Best HMM Match : Ras (HMM E-Value=8.9e-08)
Length = 492
Score = 59.3 bits (137), Expect = 2e-09
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 76 YRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 135
Y G +LVYDIT ++F W+ + +H++ ++ M++GNK D+E RR+V KE GE
Sbjct: 82 YEDDKGIMLVYDITNDKSFEKHQNWIRNIEEHASQDVEKMVLGNKCDMEDRRQVSKERGE 141
>SB_29274| Best HMM Match : Ras (HMM E-Value=2.5e-05)
Length = 152
Score = 58.4 bits (135), Expect = 4e-09
Identities = 29/70 (41%), Positives = 43/70 (61%)
Query: 70 SITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREV 129
+++ + R G LLVYDIT R++F++L WLE R++ I+L+GNK D+ REV
Sbjct: 47 NVSTAQGRKGWGILLVYDITCRKSFDNLQFWLESIRKNKLQYEEILLVGNKCDVGDDREV 106
Query: 130 KKEEGEAFAR 139
K +GE R
Sbjct: 107 PKRKGEEHVR 116
>SB_17524| Best HMM Match : Ras (HMM E-Value=2.1e-10)
Length = 159
Score = 57.6 bits (133), Expect = 7e-09
Identities = 31/131 (23%), Positives = 69/131 (52%), Gaps = 8/131 (6%)
Query: 6 LFKYIIIGDTGVGKSCLLLQFTDKRF----QPVHDLTIGVEFGARMITIDGKQIKLQIWD 61
++K + G GVGK+ + + + F Q +H + + ++ I K++K+ +WD
Sbjct: 8 VYKIALCGKMGVGKTSIYTRLSTDEFPEEEQSLHHID---QCFIPLVCICNKKLKIHLWD 64
Query: 62 TAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKS 121
T G E + S+TR++Y + L+VY + ++ + + A+ ++ + ++ L+ NK
Sbjct: 65 TLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAAKIV-LVANKM 123
Query: 122 DLESRREVKKE 132
DL + R ++ +
Sbjct: 124 DLPNYRRLETD 134
>SB_22530| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 57.2 bits (132), Expect = 1e-08
Identities = 43/168 (25%), Positives = 75/168 (44%), Gaps = 11/168 (6%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
K I+GD VGK+ L + F + T +DG + + ++D+AG E
Sbjct: 8 KLYIVGDGAVGKTALFITAATNTFPTEYIPTAYDASEQDFFNVDGIKYQAVLFDSAGGED 67
Query: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHSNSNMVIMLIGNKSDLESR 126
F + Y L+ +DI R +F ++ WL + H + + +L+GNK DL +
Sbjct: 68 FDRLRPLGYPNTDIFLVCFDIAHRASFENVALRWLPEL-DHFSPGVPRVLVGNKKDLRPK 126
Query: 127 RE---------VKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAK 165
++ V EEG+ A+ + ++E SA NV+E + +
Sbjct: 127 QDQEDSHSIDFVSYEEGKEAAQNFKMQYIENSALLNENVKEVITTSIR 174
>SB_22529| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 206
Score = 56.8 bits (131), Expect = 1e-08
Identities = 46/166 (27%), Positives = 83/166 (50%), Gaps = 14/166 (8%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
K + +GD VGK+ L T F P + + ++ + IDGK+ + + DT G
Sbjct: 11 KVVFVGDKNVGKTSFLYAATTHNF-PTGFIASIFDGYSKTMEIDGKRYTVLLCDTPGTMH 69
Query: 68 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDLE-S 125
R + +++ A+ LL +DI RE+F ++ +TWL + S++ +L+GNK +L S
Sbjct: 70 PRIPPQHWFQYASVFLLCFDIANRESFANIESTWLPHVNLET-SDVPKVLVGNKMELRCS 128
Query: 126 RRE----------VKKEEGEAFAREHGLVFMETSAKTAANVEEAFI 161
++E V E +A A + + ++E SAK +E+ +
Sbjct: 129 QQESTDLGQTHDCVPFTEAKALACKSNIPYVENSAKELKGLEDVLM 174
>SB_12958| Best HMM Match : Ras (HMM E-Value=6e-13)
Length = 168
Score = 54.8 bits (126), Expect = 5e-08
Identities = 42/121 (34%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 48 ITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDIT---RRETFNHLTTWLEDA 104
+ I ++L I DTAG SY G ++VY IT E L +
Sbjct: 8 LRIGDSSMELDILDTAGNGE-----ASYIHNGDGFVVVYSITDYYSYEMARQLVKLVTQV 62
Query: 105 RQHSNSNMV-IMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINT 163
R+ + + I+L+GNK DL R V K+E FA E+G ETSA T NV F N
Sbjct: 63 RKTDDICQIPIVLVGNKRDLRRGRCVAKDEAREFASEYGCSHYETSALTNRNVHVIFYNM 122
Query: 164 A 164
A
Sbjct: 123 A 123
>SB_6284| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 191
Score = 54.8 bits (126), Expect = 5e-08
Identities = 41/167 (24%), Positives = 76/167 (45%), Gaps = 16/167 (9%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
K +++GD VGK+CLL+ +T +F + T+ + A + I G+ L ++DTAGQE
Sbjct: 5 KCVVVGDGAVGKTCLLISYTTNKFPSEYVPTVFDNY-AVTVMIGGEPYTLGLFDTAGQED 63
Query: 68 FRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDL--- 123
+ + Y L+ + + +F ++ W+ + H +L+G + DL
Sbjct: 64 YDRLRPLSYPQTDVFLVCFSVVSPSSFENVKEKWVPEITHHC-PKTPFLLVGTQVDLRDD 122
Query: 124 ---------ESRREVKKEEGEAFARE-HGLVFMETSAKTAANVEEAF 160
++ + E E ARE + ++E SA T ++ F
Sbjct: 123 QGTIEKLSKNKQKPIAVEAAEKLARELRAVKYVECSALTQKGLKNVF 169
>SB_45967| Best HMM Match : Ras (HMM E-Value=2.1e-07)
Length = 92
Score = 54.4 bits (125), Expect = 7e-08
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 1/82 (1%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
K ++G VGKS L +QF + +F +D TI F + I G++ L++ DTAGQ+
Sbjct: 8 KIAVMGFRSVGKSSLTIQFVEGQFVDSYDPTIENTF-TKNIKYKGQEFFLELVDTAGQDE 66
Query: 68 FRSITRSYYRGAAGALLVYDIT 89
+ +SY G G +LVY +T
Sbjct: 67 YSIFPQSYSMGIHGYILVYAVT 88
>SB_24106| Best HMM Match : Ras (HMM E-Value=1e-35)
Length = 263
Score = 53.6 bits (123), Expect = 1e-07
Identities = 33/110 (30%), Positives = 61/110 (55%), Gaps = 4/110 (3%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTA- 63
++++ ++GD GVGK+ LL++F RF +D TI ++ + I ID + L+I DTA
Sbjct: 4 HVYRIALLGDEGVGKTALLVRFLCHRFLGEYDPTIEDKY-RKSINIDDVTVTLEILDTAS 62
Query: 64 -GQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNM 112
GQ + + + + R G ++VY R TF +L + + + ++N+
Sbjct: 63 RGQNSCK-LRDQFVREGDGFIVVYSTADRSTFANLHRYRDMMKLSRDTNL 111
Score = 41.5 bits (93), Expect = 5e-04
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 108 SNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSA 150
S + +++IGNKSDL R+V ++EG+ A +G +F E SA
Sbjct: 136 SKDAISVLVIGNKSDLIGERDVTRDEGQRLAETYGWLFAEASA 178
>SB_52990| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 782
Score = 52.8 bits (121), Expect = 2e-07
Identities = 26/39 (66%), Positives = 29/39 (74%)
Query: 143 LVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNE 181
L + T T V +AFINTAKEIY+KIQEGVFDINNE
Sbjct: 235 LAIVYTCCWTPFLVVQAFINTAKEIYQKIQEGVFDINNE 273
>SB_52002| Best HMM Match : Ras (HMM E-Value=2.3e-19)
Length = 351
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/122 (24%), Positives = 57/122 (46%)
Query: 4 AYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTA 63
A +F+ +++G GVGK+ L+ +F F + T+G + + L+I DTA
Sbjct: 105 AAVFRVVVLGSGGVGKTSLVKRFISGTFSEQYTPTVGDLYEKSVTLSKDFNAFLEIMDTA 164
Query: 64 GQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDL 123
G F ++ + + A +LVY + + + + + ++L+GNK+DL
Sbjct: 165 GSYPFPAMKKLTIQNADAFVLVYSVDEKASLQEALELQREIVYIKGKTVPMVLVGNKTDL 224
Query: 124 ES 125
S
Sbjct: 225 VS 226
>SB_49252| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 384
Score = 52.0 bits (119), Expect = 4e-07
Identities = 41/172 (23%), Positives = 77/172 (44%), Gaps = 11/172 (6%)
Query: 7 FKYIIIGDTGVGKSCLL--LQFTDKRFQ--PVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
+K +++GD GVGKS ++ L T + +Q ++ T G G L + DT
Sbjct: 14 YKVVLVGDAGVGKSFVIDRLNSTSEHWQGSRLYKPTTG---GHASYFTASNSCHLYLLDT 70
Query: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ---HSNSNMVIMLIGN 119
+G E +R +T+ Y + + + + + + L W D +S ++ ++G
Sbjct: 71 SGLEEYRELTKIYLKNLDCVVFTFALNDPHSLSSLEKWNNDFLDVFLGDSSRVLKFVLGC 130
Query: 120 KSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKI 171
K D + ++ + + E FA G TSA T NV + F A ++ + +
Sbjct: 131 KIDTQHEADI-QPKAEDFASRIGAELSITSAITGTNVNDFFERIADKLKQHV 181
>SB_1645| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 244
Score = 52.0 bits (119), Expect = 4e-07
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID-----GKQI 55
MA + ++GD+GVGK+ L+ + TIG ++ GK
Sbjct: 1 MAAVEKVRIAVVGDSGVGKTSLVHLICHEESISSAAWTIGCTVEVKLYDYKEGMPGGKTF 60
Query: 56 KLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 103
L+ WD G + +Y G G +LV+D+T R++F +L WL +
Sbjct: 61 FLEFWDIGGSANHENSRSIFYNGINGLILVHDLTNRKSFTNLRKWLAE 108
>SB_35038| Best HMM Match : Ras (HMM E-Value=6.8e-13)
Length = 322
Score = 51.6 bits (118), Expect = 5e-07
Identities = 40/147 (27%), Positives = 68/147 (46%), Gaps = 22/147 (14%)
Query: 8 KYIIIGDTGVGKSCLLLQF-TDKRFQPV-HDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65
K ++ GD+ VGKS L+ F +D P + T+G E +++ I
Sbjct: 7 KVLVTGDSCVGKSALVQVFQSDGTHYPKNYTQTVGAEVLVKLVNIP-------------- 52
Query: 66 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ--HSNSNMVIMLIGNKSDL 123
T S + ++ YD++ ++FN WLE R S++N+ LI K+DL
Sbjct: 53 ----ETTDSVWEHPNLVIVAYDVSNEQSFNACNKWLERCRSLAKSDNNLPGALIATKTDL 108
Query: 124 ESRREVKKEEGEAFAREHGLVFMETSA 150
+ RR + ++G+ +A L + E SA
Sbjct: 109 KQRRVISTKQGKDYANSKNLEYFECSA 135
>SB_1277| Best HMM Match : DAO (HMM E-Value=6e-32)
Length = 523
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/71 (35%), Positives = 41/71 (57%)
Query: 105 RQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTA 164
+ +S +N ++L+GNK D+E R V + G+ A + GL F ETSAK NV++ F
Sbjct: 6 KTYSWANAQVILVGNKCDMEEERVVSYDRGKQLADQLGLEFYETSAKDNTNVKKVFERLV 65
Query: 165 KEIYEKIQEGV 175
I +K+ + +
Sbjct: 66 DIICDKMSQSL 76
>SB_57342| Best HMM Match : Arf (HMM E-Value=0)
Length = 457
Score = 51.2 bits (117), Expect = 6e-07
Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)
Query: 53 KQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNM 112
K I +WD GQ+ R + R Y++GA G + V D +E + L QHS N
Sbjct: 152 KNITFSVWDIGGQDKIRRLWRHYFQGAEGIIFVVDSADKERIFEVREELTRVLQHSELNG 211
Query: 113 V-IMLIGNKSDL 123
V ++++ NK DL
Sbjct: 212 VPVVVVANKQDL 223
>SB_43575| Best HMM Match : Sina (HMM E-Value=0)
Length = 432
Score = 51.2 bits (117), Expect = 6e-07
Identities = 33/114 (28%), Positives = 55/114 (48%), Gaps = 14/114 (12%)
Query: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
DTAG+E + ++ Y RGA+ A++ YDIT+ + L Q + N +++++G K
Sbjct: 278 DTAGEEKYAGLSSFYCRGASAAIVAYDITKESSLKVLNDRHLHLLQAAEPNCLVVIVGCK 337
Query: 121 SDL--ESRREVKKEEGEAFAREHGLV------------FMETSAKTAANVEEAF 160
DL + RE+ + G A+ + F ETS+KT V+ F
Sbjct: 338 KDLVTDDTREITEAAGMELAKVQNELKSRSLLSLKRTPFFETSSKTGDGVDNVF 391
>SB_58700| Best HMM Match : Ras (HMM E-Value=2.7e-15)
Length = 857
Score = 50.8 bits (116), Expect = 8e-07
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 6/109 (5%)
Query: 75 YYRGAAGALLVYDITRRETFNHLTTWLED----ARQHSNSNMVIMLIGNKSDLESRREVK 130
YY+ A GA +V+D+TR TF+ + W D + S + +L+ NK D V
Sbjct: 710 YYKEAVGAFIVFDVTRASTFSAVQKWKNDLDNKLQLPSGEPIPAVLLANKCDQAKEGLVN 769
Query: 131 KE-EGEAFAREHGLV-FMETSAKTAANVEEAFINTAKEIYEKIQEGVFD 177
+ + + + G + + ETSAK NV EA +I + +E FD
Sbjct: 770 NSAQMDEYCADKGFIGWFETSAKEDVNVNEAAKFLVSKILQNEKENNFD 818
Score = 34.3 bits (75), Expect = 0.077
Identities = 14/35 (40%), Positives = 23/35 (65%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTI 39
YLFK ++IGD GVGK+ L+ ++ + F + T+
Sbjct: 670 YLFKVLVIGDLGVGKTSLIKRYVHQFFSVHYRATV 704
>SB_33691| Best HMM Match : Ras (HMM E-Value=2.8e-13)
Length = 270
Score = 50.8 bits (116), Expect = 8e-07
Identities = 45/177 (25%), Positives = 76/177 (42%), Gaps = 11/177 (6%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
+K I+G GVGK+ LL F +F H T+ ++ + +DG I DTAG
Sbjct: 13 YKISILGAGGVGKTSLLKTFFGHKFSEKHVPTVD-DYFIHSVNMDGVYYSTCIVDTAGTY 71
Query: 67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-----ARQHSNSNMVIM-LIGNK 120
AF + R ++V+ I +F +++ + S + +I+ L+ NK
Sbjct: 72 AFPVMRRLAIHTCQAFIVVFAINSESSFREAFEIIDEIYSIKVKAGSEAKKIILNLVANK 131
Query: 121 SDLESR-REVKKEEGEAFAREHGLV---FMETSAKTAANVEEAFINTAKEIYEKIQE 173
D++ R R + A + + +ME S+ VE F + K I E +E
Sbjct: 132 LDIDCRERVITAARAHAELSKRSWLTGEYMEISSMLNFRVERTFHSIVKLIVEDFEE 188
>SB_11757| Best HMM Match : Ras (HMM E-Value=0)
Length = 211
Score = 50.4 bits (115), Expect = 1e-06
Identities = 42/167 (25%), Positives = 80/167 (47%), Gaps = 16/167 (9%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
K +I+GD GVGK+ LL+ + F P + + + ++ K ++ DTAGQE
Sbjct: 20 KCVIVGDGGVGKTSLLVSYMMDGF-PNSYVPTAFDTYHVTVEVNKKLCMIEFCDTAGQED 78
Query: 68 FRSITRSYYRGAAGALLVYDITRRETF-NHLTTWLEDARQHSNSNMVIMLIGNKSDLES- 125
F ++ Y A ++ + + +F N + W+ + R+ I+L+G SDL+
Sbjct: 79 FDALRPLCYSSADVFIVCFSVVSPTSFANVASKWIPEIREF-QPKAPIILVGTHSDLKDC 137
Query: 126 ---RREVKKEEGEAFA--REHGLV-------FMETSAKTAANVEEAF 160
E+ +++ + + + GLV ++ETS+ T N++ F
Sbjct: 138 YKILTELSQQDSQPISVKKAEGLVKKTRCVCYVETSSVTQKNLKTVF 184
>SB_38760| Best HMM Match : Ras (HMM E-Value=4.6e-06)
Length = 965
Score = 49.6 bits (113), Expect = 2e-06
Identities = 29/90 (32%), Positives = 50/90 (55%), Gaps = 2/90 (2%)
Query: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65
+ K +IIG+ GVGKS L ++F KRF +D T+ + + + G+ + +++ DTAG+
Sbjct: 861 IVKVVIIGEDGVGKSALTVRFLTKRFIGEYDDTLESTY-RQDAEVAGEVVAIELTDTAGE 919
Query: 66 EAFRSITRSYYRGAAGALLVYDITRRETFN 95
+ + R G +L Y IT R +F+
Sbjct: 920 NSPAKLERCLEIGEVFVVL-YSITSRHSFD 948
>SB_37276| Best HMM Match : Ras (HMM E-Value=0.00045)
Length = 100
Score = 49.6 bits (113), Expect = 2e-06
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 115 MLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQE 173
+L+GNK L+ REV EG A+E GL F ETSA+ NV + F I E+I++
Sbjct: 12 VLVGNKCHLDCEREVSVAEGRGLAKELGLPFFETSAEKNINVTDCFEALVDSILEEIKQ 70
>SB_53421| Best HMM Match : Arf (HMM E-Value=0)
Length = 625
Score = 48.8 bits (111), Expect = 3e-06
Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 44 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 103
G + T+ K I +WD GQ+ R++ R YY+G G + V D RE L
Sbjct: 29 GFNVETVTYKNISFTVWDIGGQDKIRALWRVYYQGCQGIIFVVDSADRERAEEARNELHK 88
Query: 104 ARQHSNSNMVIML-IGNKSDL 123
VI+L I NK D+
Sbjct: 89 LLAEEELQQVILLVIANKQDM 109
>SB_42281| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 179
Score = 48.0 bits (109), Expect = 6e-06
Identities = 24/89 (26%), Positives = 41/89 (46%), Gaps = 1/89 (1%)
Query: 44 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 103
G + +++ K I +WD GQ+ R + R Y++ G + V D RE N L
Sbjct: 50 GFNVESVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIYVVDSNDRERVNESKEELNK 109
Query: 104 ARQHSN-SNMVIMLIGNKSDLESRREVKK 131
Q + V++++ NK DL + V +
Sbjct: 110 MLQEDELKDAVVLVMANKQDLPNALSVSE 138
>SB_1750| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 225
Score = 48.0 bits (109), Expect = 6e-06
Identities = 28/87 (32%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 83 LLVYDITRRETFNHLTTWLED--ARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFARE 140
LLVY IT ++F ++ ++ A + S+ ++ ++ NK+D ES+REV +G A A+
Sbjct: 92 LLVYSITSLQSFTDISCIIQQLTAMRTQGSHALLAIVANKTDAESQREVSTSDGVALAQS 151
Query: 141 HGLVFMETSAKTA-ANVEEAFINTAKE 166
F E S T+ +VE F +E
Sbjct: 152 LPCSFSEISTSTSYEDVERVFTEIIQE 178
>SB_35222| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 267
Score = 47.2 bits (107), Expect = 1e-05
Identities = 35/132 (26%), Positives = 69/132 (52%), Gaps = 11/132 (8%)
Query: 8 KYIIIGDTGVGKSCLLLQ--FTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65
+ +I+GD+ VGK+CLLLQ + H +I + A +I +DGK KL++ D
Sbjct: 20 RIVILGDSTVGKTCLLLQLCYKSNTMSRKHLESISNNYVANII-VDGKVYKLELCDVDNL 78
Query: 66 EAFRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQHSNSNMVIMLIGNKSDL- 123
+ I++ + L + + ++F H+ W + + + + N I+++G K+DL
Sbjct: 79 DT--KISKP-FSDTDVFCLCFSVGDMDSFRHVENKWYAEVK-NCSPNSPIIVVGTKTDLR 134
Query: 124 --ESRREVKKEE 133
E+++ KK++
Sbjct: 135 ENENKKRGKKDD 146
>SB_12762| Best HMM Match : Ras (HMM E-Value=2.2e-21)
Length = 242
Score = 46.8 bits (106), Expect = 1e-05
Identities = 38/170 (22%), Positives = 74/170 (43%), Gaps = 10/170 (5%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQE 66
F + G + VGK+ L+L+F F + TI +F + + + + +LQI DT+G
Sbjct: 29 FTIVFFGASSVGKTSLILRFLGYAFNDDYSPTIE-DFFIKHVFFNNETYELQIIDTSGTY 87
Query: 67 AFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSD---- 122
F ++ + +LVY E+F L + + + + +++ NK+D
Sbjct: 88 EFPAMRKVDIAKGDAFVLVYSQDHPESFTKLNRYRSEILEGGKNRHPCIVVCNKNDLPLA 147
Query: 123 -----LESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEI 167
L R ++ E ++++ SAK + VE+ F+ E+
Sbjct: 148 THLGVLTDHRGLRISAQHLVQTEWQSLWIDCSAKENSQVEDIFLRLMDEM 197
>SB_12680| Best HMM Match : Ras (HMM E-Value=3.4e-05)
Length = 243
Score = 46.4 bits (105), Expect = 2e-05
Identities = 35/122 (28%), Positives = 57/122 (46%), Gaps = 9/122 (7%)
Query: 5 YLFKYIIIGD-TGVGKSC-LLLQFTDKRFQPVHDL-TIGVEFGARMIT---IDGKQ---I 55
+ FK + +GD TG GK L + R + TIGV+F I D K+ +
Sbjct: 49 HTFKIMCVGDYTGFGKKGGFLSDYIHNRPLSFYQKPTIGVDFYVHFIEWRETDKKKDSTV 108
Query: 56 KLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIM 115
KLQ WD A E F +T Y R +GAL+ + + W E ++ ++ ++ ++
Sbjct: 109 KLQFWDVAEHERFLKMTAVYCRNCSGALVFWGPKSPSRLSSALKWSEKVKEANSGSVPMV 168
Query: 116 LI 117
L+
Sbjct: 169 LV 170
>SB_22751| Best HMM Match : Ras (HMM E-Value=0.0049)
Length = 51
Score = 46.0 bits (104), Expect = 2e-05
Identities = 22/48 (45%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 114 IMLIGNKSDLESRREVKKEEGEAFAREH-GLVFMETSAKTAANVEEAF 160
++L+GNK DLE R V K++G+ A++ F+ETSAK NV E F
Sbjct: 1 MVLVGNKCDLEDERVVGKDQGQNLAKQFANCTFLETSAKAKINVNEIF 48
>SB_58217| Best HMM Match : Ras (HMM E-Value=0.00048)
Length = 472
Score = 44.8 bits (101), Expect = 5e-05
Identities = 19/76 (25%), Positives = 43/76 (56%), Gaps = 1/76 (1%)
Query: 57 LQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIML 116
+ +WDT G E + S+TR++Y + L+VY + ++ + + A+ ++ + ++ L
Sbjct: 1 IHLWDTLGMEEYESLTRNHYSNSKVVLVVYSLDLPDSLAQVKECTQSAQVNAPAAKIV-L 59
Query: 117 IGNKSDLESRREVKKE 132
+ NK DL + R ++ +
Sbjct: 60 VANKMDLPNYRRLETD 75
>SB_11310| Best HMM Match : Arf (HMM E-Value=0)
Length = 255
Score = 44.4 bits (100), Expect = 7e-05
Identities = 27/117 (23%), Positives = 53/117 (45%), Gaps = 6/117 (5%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
+ +++G GK+ +L K +PV+ + G + ++ K IK +WD GQ+
Sbjct: 92 RLLMVGLDAAGKTTILYHL--KLDEPVNTIPT---IGFNVEVVEYKNIKFTVWDIGGQDK 146
Query: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLTTWL-EDARQHSNSNMVIMLIGNKSDL 123
R + R Y++ G + V D R+ L + ++ ++++ NK DL
Sbjct: 147 IRLLWRLYFQETQGLIFVVDSNDRDRIQEAKEELFKLLKEEELKRAALLVLANKQDL 203
>SB_51370| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 389
Score = 44.0 bits (99), Expect = 1e-04
Identities = 46/198 (23%), Positives = 81/198 (40%), Gaps = 31/198 (15%)
Query: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRS 70
++G GVGKS ++ +RF +D + + + M IDG+ + L + DTAG+ + +
Sbjct: 186 VLGKDGVGKSAFTVRALTRRFIGEYDPFLELNYKHSM-EIDGQYLALDVLDTAGKVSREA 244
Query: 71 ITRSYYRGAAGAL---------------------LVYDITRRETFNHLTTWLEDARQHSN 109
+ G L L+Y T + +F E + N
Sbjct: 245 RMSPRQKTKTGQLAPTGNSEEKLERASENTEIYFLLYSTTDKRSFTEAEEIAEYLFETKN 304
Query: 110 SN-MVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIY 168
+ + ++ K DL REV + EG A+ +G F + S + E + T +
Sbjct: 305 IDPSTLTIVATKKDLVHMREVDEYEGRFLAQNYGCAFAQIS------ISEHYTETVSTVQ 358
Query: 169 EKIQEGV--FDINNEANG 184
I+E + +I +ANG
Sbjct: 359 NAIKECINRLNIRKKANG 376
>SB_56255| Best HMM Match : Arf (HMM E-Value=0)
Length = 181
Score = 43.6 bits (98), Expect = 1e-04
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 1/81 (1%)
Query: 44 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 103
G + T++ K I +WD GQ+ R + R Y++ G + V D RE L
Sbjct: 50 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVGEAREELNR 109
Query: 104 -ARQHSNSNMVIMLIGNKSDL 123
+ + V+++ NK DL
Sbjct: 110 MLNEDELRDAVLLVFANKQDL 130
>SB_22243| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 57
Score = 43.2 bits (97), Expect = 2e-04
Identities = 16/27 (59%), Positives = 23/27 (85%)
Query: 51 DGKQIKLQIWDTAGQEAFRSITRSYYR 77
+G+ I+L +WDTAGQE F +IT++YYR
Sbjct: 30 NGEDIRLMLWDTAGQEEFDAITKAYYR 56
>SB_55155| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 487
Score = 42.3 bits (95), Expect = 3e-04
Identities = 34/127 (26%), Positives = 58/127 (45%), Gaps = 7/127 (5%)
Query: 8 KYIIIGDTGVGKSCLL--LQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65
+ +++G G GKS L L D +P T G F +T DG + L IW+ G
Sbjct: 168 RILVLGLDGSGKSVFLSALSQGDSSKRPSTTKTEG--FNVVCLTTDG--LNLNIWEIGGD 223
Query: 66 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMV-IMLIGNKSDLE 124
E +R+ ++ + V D + + FN L+ +S N V ++L+ +K DL
Sbjct: 224 EKYRAYWPNFIADTQLLVYVVDSSDPDRFNESRDNLKSLLSNSLLNGVPVLLVASKQDLP 283
Query: 125 SRREVKK 131
R++ +
Sbjct: 284 GARQLSE 290
>SB_8139| Best HMM Match : Ras (HMM E-Value=0.02)
Length = 96
Score = 41.9 bits (94), Expect = 4e-04
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 116 LIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEA 159
L+GNK+DLE R V + E A A GL + ETSA T NV ++
Sbjct: 2 LLGNKADLEDDRVVDEAEARALADNLGLKYFETSAATGQNVTKS 45
>SB_49432| Best HMM Match : Ras (HMM E-Value=1.4e-12)
Length = 460
Score = 41.5 bits (93), Expect = 5e-04
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEA 67
+ +++G GVGKS L ++F +RF +D T+ ++ ID + + L I DTAG+
Sbjct: 18 RVVVLGKDGVGKSALTVRFLTRRFIGEYDQTL-ESTHRHILQIDNEDVSLDISDTAGEVR 76
Query: 68 FR 69
R
Sbjct: 77 VR 78
Score = 40.7 bits (91), Expect = 9e-04
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Query: 83 LLVYDITRRETFNHLTTWLEDARQHSNSN-MVIMLIGNKSDLESRREVKKEEGEAFAREH 141
L++Y I R +F+ + H N++ M ++++ K DL+ R V EEG F+ E
Sbjct: 131 LVLYSIVDRSSFDEARWIARYVKDHRNTDSMSMVIVATKKDLDHLRRVDIEEGLGFSNEL 190
Query: 142 GLVFMETSAKTAAN-VEEAFINTAKEI 167
F E S N V+E K I
Sbjct: 191 DCTFYEVSISEGYNEVQELLHELLKRI 217
>SB_31439| Best HMM Match : Ras (HMM E-Value=4.7)
Length = 55
Score = 41.5 bits (93), Expect = 5e-04
Identities = 16/40 (40%), Positives = 25/40 (62%)
Query: 71 ITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNS 110
+ +Y+ GALLVYD+T RE+F L WL++ ++ S
Sbjct: 1 VRNEFYKDTQGALLVYDVTSRESFEALDIWLDEIKKDIGS 40
>SB_26245| Best HMM Match : Homeobox (HMM E-Value=1.7e-32)
Length = 1168
Score = 41.1 bits (92), Expect = 7e-04
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 83 LLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHG 142
+L+Y IT RE+F+ + + + VI+L+ NK DL +R+V EG A+
Sbjct: 1063 VLIYSITSRESFHAVWNYYYHVVTSIEAKPVIVLLANKHDLGHKRKVLTTEGRQMAQAIK 1122
Query: 143 LVFMETSA 150
F E SA
Sbjct: 1123 CPFYEVSA 1130
>SB_51669| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 646
Score = 40.3 bits (90), Expect = 0.001
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 4/82 (4%)
Query: 49 TIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHL-TTWLEDARQH 107
TIDG + L++WDT G + R Y+ A +L + I +F + W + +++
Sbjct: 77 TIDGVSVSLRLWDTFGDHSMN--RRFAYQNAHVIVLCFAINTPSSFKDVNAVWYPEIKKY 134
Query: 108 SNSNMVIMLIGNKSDLESRREV 129
+ I+L+G KSD S+ V
Sbjct: 135 C-PRVPIILVGTKSDWRSQLNV 155
>SB_56254| Best HMM Match : Arf (HMM E-Value=5.3e-31)
Length = 650
Score = 39.9 bits (89), Expect = 0.002
Identities = 16/49 (32%), Positives = 25/49 (51%)
Query: 44 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRE 92
G + T++ K I +WD GQ+ R + R Y++ G + V D RE
Sbjct: 499 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRE 547
>SB_37042| Best HMM Match : Arf (HMM E-Value=0)
Length = 188
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/81 (30%), Positives = 39/81 (48%), Gaps = 6/81 (7%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDL-TIGVEFGARMITIDGKQIKLQIWDTAGQE 66
+ +++G GK+ +L + K + V + TIG T K + L IWD GQ+
Sbjct: 21 RIVMLGLDAAGKTTILYKLKLK--ETVSTIPTIGFNVETLQPT---KNVTLTIWDVGGQD 75
Query: 67 AFRSITRSYYRGAAGALLVYD 87
R + R Y++G G L V D
Sbjct: 76 KIRPLWRHYFQGTEGLLFVVD 96
>SB_39092| Best HMM Match : Arf (HMM E-Value=8e-36)
Length = 260
Score = 38.7 bits (86), Expect = 0.004
Identities = 21/89 (23%), Positives = 40/89 (44%), Gaps = 1/89 (1%)
Query: 44 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED 103
G M + + +++WD GQ FRS+ Y RG + + D + L +
Sbjct: 54 GFNMRKVSKGNVTIKVWDIGGQPRFRSMWERYCRGVNCIVYMVDAADHDKLEASKNELHN 113
Query: 104 ARQHSN-SNMVIMLIGNKSDLESRREVKK 131
+ + + I+++GNK DL + + K+
Sbjct: 114 LLEKPQLAGIPILVLGNKKDLPNSLDEKE 142
>SB_45519| Best HMM Match : RNB (HMM E-Value=1.6e-35)
Length = 2748
Score = 37.1 bits (82), Expect = 0.011
Identities = 30/120 (25%), Positives = 54/120 (45%), Gaps = 19/120 (15%)
Query: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65
+F+ ++G GVGKS + +++ F I GK +++ DTAGQ
Sbjct: 2598 MFRLCVVGSGGVGKSSVTIRYLKNEFTE--------------IDYCGKLYDIEVVDTAGQ 2643
Query: 66 EAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWL-EDARQHSNSN----MVIMLIGNK 120
E + S S L+++ I ++N L + R+H SN + ++++GNK
Sbjct: 2644 EEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHEESNTTCTIPMVIVGNK 2703
>SB_22497| Best HMM Match : Ras (HMM E-Value=7.7e-07)
Length = 769
Score = 37.1 bits (82), Expect = 0.011
Identities = 35/133 (26%), Positives = 56/133 (42%), Gaps = 21/133 (15%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Y K +I GD GK+C+ F +H G F + I + Q D G
Sbjct: 224 YNMKIVIKGDRNTGKTCM--------FHRLH----GKPFNEQYIPTNEIQE-----DDDG 266
Query: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 124
+ Y+G G L++ DIT+ TF ++ L H + ++++ N+ D+E
Sbjct: 267 NAVLDAGFVDVYKGTHGVLMLLDITKPWTFTYVRRELPKVPPH----IPVLVLANRRDME 322
Query: 125 SRREVKKEEGEAF 137
R V EE +F
Sbjct: 323 EHRLVDAEEITSF 335
>SB_53179| Best HMM Match : BTB (HMM E-Value=3.3e-21)
Length = 604
Score = 35.9 bits (79), Expect = 0.025
Identities = 30/131 (22%), Positives = 57/131 (43%), Gaps = 14/131 (10%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGV-------EFGARMITIDGKQIKLQIW 60
K ++GDT VGK+C+L ++ + P T+ E + D + W
Sbjct: 10 KLKVVGDTNVGKTCILYRWFLESQSPQDVYTVMPKSIPPVQESFYTNFSYDRVNYIVTYW 69
Query: 61 DTAGQEAFRSITRSY-----YRGAAGALLVYDITRRETFNHLTT-WLEDARQHSNSNMVI 114
DT + S YR ++ +DIT +F +++T W+ + + H +
Sbjct: 70 DTCTLARTEELDLSKLRPLEYRDTDVFIICFDITNPTSFQNVSTVWVPELK-HYMPETPV 128
Query: 115 MLIGNKSDLES 125
+++GNK D+ +
Sbjct: 129 LVVGNKKDMRT 139
>SB_7588| Best HMM Match : DcpS (HMM E-Value=0)
Length = 446
Score = 35.9 bits (79), Expect = 0.025
Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
Query: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLED-ARQHSNSNMVIMLIGN 119
D GQ+ R + R Y+ G+ G + V D R+ + L+ +++I++ N
Sbjct: 143 DVGGQDKIRPLWRHYFAGSQGLIFVVDCADRDRIDEARKELQRIINDREMKDVIILIFAN 202
Query: 120 KSDL 123
K DL
Sbjct: 203 KQDL 206
>SB_51788| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 414
Score = 35.1 bits (77), Expect = 0.044
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 5/91 (5%)
Query: 59 IWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTT-WLEDARQHSNSNMVIMLI 117
I DT G + Y A +L +D+T R +F ++ + W + R + + +ML+
Sbjct: 77 IVDTGGSTVLDYVRPLAYIHADLFILCFDVTNRASFENVASKWFPEIRLY-EKKVPLMLV 135
Query: 118 GNKSDLESRREVKKEEGEAF---AREHGLVF 145
G K + +R+V K + E +E+G F
Sbjct: 136 GLKPNPVEKRKVSKADAERMLTRVKENGSYF 166
>SB_5178| Best HMM Match : Ras (HMM E-Value=9e-10)
Length = 166
Score = 35.1 bits (77), Expect = 0.044
Identities = 24/53 (45%), Positives = 29/53 (54%), Gaps = 10/53 (18%)
Query: 118 GNKSDLESRREVKKE----EGEAFAREHG------LVFMETSAKTAANVEEAF 160
GNK DLE +REV E E AFARE G + +ETSAK N+ + F
Sbjct: 82 GNKKDLEEQREVSSEQVVKEVMAFAREKGCEGKLNMRQVETSAKDDCNISDVF 134
>SB_6793| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 255
Score = 34.7 bits (76), Expect = 0.059
Identities = 14/32 (43%), Positives = 18/32 (56%)
Query: 56 KLQIWDTAGQEAFRSITRSYYRGAAGALLVYD 87
KL IWD GQ + RS R+Y+ G + V D
Sbjct: 3 KLNIWDVGGQRSLRSYWRNYFESTDGLIWVVD 34
>SB_39298| Best HMM Match : Ras (HMM E-Value=0.11)
Length = 64
Score = 33.5 bits (73), Expect = 0.14
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 70 SITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMV-IMLIGNKSDLESRR 127
S+ S R A ++VY IT + +FN +E ++ V + L+GNK+DLE R
Sbjct: 4 SLYESSIRWADAFIVVYSITDKNSFNTAVQLVEAVYYGKGTDEVHVALVGNKTDLEHFR 62
>SB_16780| Best HMM Match : Ras (HMM E-Value=6.7e-05)
Length = 138
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/69 (31%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 83 LLVYDITRRETFNHLTTWLEDARQHSNSNM-VIMLIGNKSDLESRREVKKEEGEAFAREH 141
L++Y I R +F+ + + V++LIG K DL RE+ + EG A E
Sbjct: 3 LILYSIVDRTSFDEASRIARYLKWRKFPETGVLILIGTKRDLGHLREIDETEGSELAEEL 62
Query: 142 GLVFMETSA 150
F E SA
Sbjct: 63 ECPFYELSA 71
>SB_35075| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1184
Score = 33.1 bits (72), Expect = 0.18
Identities = 14/26 (53%), Positives = 19/26 (73%)
Query: 140 EHGLVFMETSAKTAANVEEAFINTAK 165
+H + FMETSAKT NV+ AF+ A+
Sbjct: 149 DHNVAFMETSAKTGLNVDLAFMAIAR 174
>SB_45581| Best HMM Match : Ras (HMM E-Value=0.069)
Length = 284
Score = 33.1 bits (72), Expect = 0.18
Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 6/96 (6%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFG---ARMITIDGKQIKLQIWDTAG 64
+ +++G GVGKS L ++ KRF +D T+G E G M+ I Q+ Q T G
Sbjct: 18 RVVVLGQDGVGKSALTVRLLTKRFIGEYDSTLG-EMGFYINTMLKIREPQLISQSC-TDG 75
Query: 65 QEAFRSITRSYYR-GAAGALLVYDITRRETFNHLTT 99
R+ +Y R G V+ T ++T L T
Sbjct: 76 YVYLRTAKDTYGRPGTPKDCKVHLRTAKDTIGRLDT 111
>SB_40082| Best HMM Match : tRNA-synt_2 (HMM E-Value=8.1e-37)
Length = 479
Score = 33.1 bits (72), Expect = 0.18
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 122 DLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAF 160
DL SRR + +EG+ +AR L + ETS+ V E F
Sbjct: 39 DLISRRVISSKEGQKWARAQDLKYYETSSANGQGVYEMF 77
>SB_34024| Best HMM Match : VLPT (HMM E-Value=3.7)
Length = 368
Score = 31.9 bits (69), Expect = 0.41
Identities = 12/34 (35%), Positives = 22/34 (64%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIG 40
+ +++G GVGK+ L+++F RF +D T+G
Sbjct: 325 YSMVVLGAAGVGKTALVVRFVTGRFLNEYDPTLG 358
>SB_35649| Best HMM Match : M (HMM E-Value=6e-09)
Length = 1279
Score = 31.5 bits (68), Expect = 0.55
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 121 SDLESRREVKKEEGEAFAREHGLVFMETS--AKTAANVEEAFINTAKEIYEKIQEGVFDI 178
S+LE ++V +E E ++H V E T ++E F NT + YEK++ + ++
Sbjct: 40 SELEEHQKVIEETNETLKKQHETVLFEKDELTLTIKTLQEEF-NTMLQEYEKLKAKMENL 98
Query: 179 NNEANG 184
E +G
Sbjct: 99 PTEMDG 104
>SB_9680| Best HMM Match : Ank (HMM E-Value=4e-20)
Length = 1243
Score = 31.1 bits (67), Expect = 0.72
Identities = 32/132 (24%), Positives = 55/132 (41%), Gaps = 16/132 (12%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID------------- 51
Y K +++G G GK+ LL + P + T+G+ + I
Sbjct: 665 YRMKLMVVGIQGYGKTTLLAALKGQPL-PSNLSTVGIVVDEWSVQISTSLLSRIGITSGI 723
Query: 52 GKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDIT-RRETFNHLTTWLEDARQHSNS 110
G I L WD AGQ + + + + + L V++ T E +L +WL + + +
Sbjct: 724 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKARAPY 783
Query: 111 NMVIMLIGNKSD 122
+ VI +IG D
Sbjct: 784 SDVI-IIGTHLD 794
>SB_15207| Best HMM Match : Arf (HMM E-Value=1.9e-05)
Length = 259
Score = 30.7 bits (66), Expect = 0.95
Identities = 11/33 (33%), Positives = 18/33 (54%)
Query: 44 GARMITIDGKQIKLQIWDTAGQEAFRSITRSYY 76
G + T++ + +K IWD G + R + R YY
Sbjct: 222 GFNVETVEHRSLKFTIWDVGGLQKLRPLWRHYY 254
>SB_2281| Best HMM Match : Ras (HMM E-Value=3.4e-06)
Length = 138
Score = 30.7 bits (66), Expect = 0.95
Identities = 20/74 (27%), Positives = 37/74 (50%), Gaps = 5/74 (6%)
Query: 52 GKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWL-EDARQHSNS 110
GK +++ D+AGQE + S S L+++ I ++N L + R+H S
Sbjct: 20 GKLYDIEVVDSAGQEEYTSFRDSSLATGDAFLVLFAINSASSWNELKDLRGKIIREHKES 79
Query: 111 N----MVIMLIGNK 120
N + ++++GNK
Sbjct: 80 NTTCTIPMVIVGNK 93
>SB_54000| Best HMM Match : MMR_HSR1 (HMM E-Value=1.8)
Length = 65
Score = 30.7 bits (66), Expect = 0.95
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQF 26
YL K ++IGD+ VGK+ LLL F
Sbjct: 11 YLLKVLLIGDSNVGKTKLLLTF 32
>SB_18358| Best HMM Match : Arf (HMM E-Value=0)
Length = 214
Score = 30.7 bits (66), Expect = 0.95
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 1/71 (1%)
Query: 53 KQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSN- 111
K I+ ++WD G+E R + ++Y R + V D T L + + N
Sbjct: 64 KGIRFKVWDIGGREQNRPLWKAYARQTDAVIYVVDSTSAGKLEEARDELFNLLNSAQLNG 123
Query: 112 MVIMLIGNKSD 122
I++ NK D
Sbjct: 124 APILIFANKQD 134
>SB_51460| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1584
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 117 IGNKSDLESR-REVKKEEGEAFAREHGL--VFMETSAKTAANVEEAFINTAKEIYE 169
+G K++L+S +E+ KE+ E F RE G +F A V E I T + + +
Sbjct: 1347 VGAKTELDSAMKELNKEDAERFVREQGCEWIFNPPHASHFGGVWERQIRTIRRVLD 1402
>SB_51210| Best HMM Match : rve (HMM E-Value=2.2e-13)
Length = 331
Score = 30.3 bits (65), Expect = 1.3
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 117 IGNKSDLESR-REVKKEEGEAFAREHGL--VFMETSAKTAANVEEAFINTAKEIYE 169
+G K++L+S +E+ KE+ E F RE G +F A V E I T + + +
Sbjct: 94 VGAKTELDSAMKELNKEDAERFVREQGCEWIFNPPHASHFGGVWERQIRTIRRVLD 149
>SB_20481| Best HMM Match : Pox_A_type_inc (HMM E-Value=5.60519e-45)
Length = 4160
Score = 30.3 bits (65), Expect = 1.3
Identities = 23/60 (38%), Positives = 30/60 (50%), Gaps = 5/60 (8%)
Query: 116 LIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKE--IYEKIQE 173
L G DLES E K E E RE+ +ETS K + + E F + KE I E +Q+
Sbjct: 2880 LRGRVEDLESAEEFFKRENERLVREN--TQLETSYKESTYILETF-KSEKETVILESVQD 2936
>SB_31701| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 132
Score = 29.9 bits (64), Expect = 1.7
Identities = 21/67 (31%), Positives = 30/67 (44%), Gaps = 7/67 (10%)
Query: 10 IIIGDTGVGKSCLLLQFTDKRFQ-----PVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
+I+G GK+ LL Q K + P +T V ITI +KL WD G
Sbjct: 25 LILGLDNAGKTTLLEQIKRKFCKTYNGIPFEKITTTVGLNIGKITIS--HVKLMFWDLGG 82
Query: 65 QEAFRSI 71
Q+ R++
Sbjct: 83 QQELRTL 89
>SB_36609| Best HMM Match : Ion_trans_2 (HMM E-Value=1.7e-13)
Length = 661
Score = 29.9 bits (64), Expect = 1.7
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
Query: 132 EEGEAFAREHGLVFMETSAKTAANVEEAFI-NTAKEIYEKIQEGVFDIN 179
E GE H F+ + N+ E + N KEI + I EG FD+N
Sbjct: 173 ESGEERRERHHFEFVRQNLIEKYNISEKDMRNLFKEISKAIDEGYFDVN 221
>SB_12307| Best HMM Match : Death (HMM E-Value=0.00097)
Length = 1366
Score = 29.9 bits (64), Expect = 1.7
Identities = 23/86 (26%), Positives = 40/86 (46%), Gaps = 7/86 (8%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Y + ++IG GK+ L RF P + T G+E +D +Q++ W +
Sbjct: 360 YRGRIMLIGQDRAGKTSLKKSLLGLRFDPQEESTEGIEVDPSRFEVDVEQVR--PWQKSD 417
Query: 65 QEAFRSITRSYYRGAAGALLVYDITR 90
+ S+++S A AL+VY+ R
Sbjct: 418 ET--ESVSQS---DDAIALMVYENLR 438
>SB_37902| Best HMM Match : RPH3A_effector (HMM E-Value=7.6e-10)
Length = 314
Score = 29.5 bits (63), Expect = 2.2
Identities = 15/50 (30%), Positives = 24/50 (48%), Gaps = 1/50 (2%)
Query: 47 MITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNH 96
++ D + I LQ+W G F+SI + Y G G L V ++ + H
Sbjct: 247 LVQCDKRDITLQLWKKTGAWFFKSIPK-YTGGPLGGLSVDGLSNTRSVGH 295
>SB_22944| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2468
Score = 29.5 bits (63), Expect = 2.2
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 117 IGNKSDLESR-REVKKEEGEAFAREHGL--VFMETSAKTAANVEEAFINTAKEIYE 169
+G K++L+S +E+ KE E F RE G +F A V E I T +++ +
Sbjct: 1717 VGAKTELDSAMKELNKEGAERFVREQGCEWIFNPPHASHFGGVWERQIRTIRQVLD 1772
>SB_642| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 2229
Score = 29.5 bits (63), Expect = 2.2
Identities = 24/115 (20%), Positives = 51/115 (44%), Gaps = 5/115 (4%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID--GKQIKLQIWDT 62
Y K +++G GK+ L+ + ++ T G+ + D ++ +IWD
Sbjct: 550 YSMKLMLVGREAQGKTTLMHRLMLDNTYFINSATNGISMEEFRLKKDFLHREFIFKIWDF 609
Query: 63 AGQEAFRSITRSYYRGAAGALLVYDITR-RETFNHLTTWLE--DARQHSNSNMVI 114
GQE + + + + + +LV+++ E L WL+ AR +S +++
Sbjct: 610 GGQEDYYATHQCFISTLSLYILVWNLEEGEEGAARLEGWLDTISARAPGSSLVIV 664
>SB_29025| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 431
Score = 29.1 bits (62), Expect = 2.9
Identities = 22/85 (25%), Positives = 38/85 (44%), Gaps = 4/85 (4%)
Query: 91 RETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLV--FMET 148
R N + + + S + ++ N D+ + E+++ +AF ++HGL FM
Sbjct: 206 RVKMNRMRLRIASRLKDSQNTYAMLTTFNDIDMSNIMEMRQTYKDAFFKKHGLKLGFMSA 265
Query: 149 SAKTAANVEEAF--INTAKEIYEKI 171
K AA E+ +N A E KI
Sbjct: 266 FVKAAAYALESLPVVNAACETQIKI 290
>SB_16463| Best HMM Match : RhoGAP (HMM E-Value=5.7e-25)
Length = 252
Score = 28.7 bits (61), Expect = 3.8
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 3/91 (3%)
Query: 92 ETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAK 151
ET HL T L+ +H+++N + N D+ R + R+ + ME++AK
Sbjct: 95 ETLRHLLTHLKHVAEHADTNKMKKETLNTRDILPSRSTYGGSYKEPVRQKHVHKMESNAK 154
Query: 152 TAANVEEAFINTAKEIYEKIQEGVFDINNEA 182
++ E E Y K+ DI+ +A
Sbjct: 155 ---HIAELLEEMHSERYLKMSRQRSDISGQA 182
>SB_22177| Best HMM Match : 2OG-FeII_Oxy (HMM E-Value=4.5e-11)
Length = 1170
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 3/50 (6%)
Query: 117 IGNKSDLESR-REVKKEEGEAFAREHGL--VFMETSAKTAANVEEAFINT 163
+G K++L+S +E+ KE+ E F RE G +F A V E I T
Sbjct: 1109 VGAKTELDSAMKELNKEDAERFVREQGCEWIFNPPHASHFGGVWERQIRT 1158
>SB_17523| Best HMM Match : MMR_HSR1 (HMM E-Value=4.2)
Length = 87
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 6 LFKYIIIGDTGVGKSCLLLQFTDKRF--QPVHDLTIGVEFGARMITIDGKQIK 56
L+K + G GVGK+ L L+ D++F + D+T + ++ G+ +K
Sbjct: 27 LYKVVFAGFRGVGKTSLFLRIRDEKFYGKESRDMTPDICVKEVVVAETGEMVK 79
>SB_58962| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 59
Score = 28.3 bits (60), Expect = 5.1
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 48 ITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFN 95
+ +DG+ I L I DTAG+ + ++ + A +VY +T R +F+
Sbjct: 8 LIVDGQFISLDIMDTAGKNSVEKMS-TCLTFAELFFIVYSVTDRTSFD 54
>SB_42891| Best HMM Match : DUF537 (HMM E-Value=1.2e-23)
Length = 2386
Score = 28.3 bits (60), Expect = 5.1
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 6/56 (10%)
Query: 95 NHLTT-WLEDARQHSNSNM----VIMLIGNKSDLESRREVKKEEGEAFAREHGLVF 145
+HLTT WL + + + +L+GN + S++E+KK+ F REH V+
Sbjct: 1190 HHLTTPWLASLHNFTMLDQQRGGIDLLVGNLDETVSKKELKKKLASVF-REHCKVY 1244
>SB_55159| Best HMM Match : Ribosomal_S17e (HMM E-Value=2.8)
Length = 250
Score = 27.9 bits (59), Expect = 6.7
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 52 GKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDIT-RRETFNHLTTWLED-ARQHSN 109
G I L WD AGQ + + + + + L V++ T E +L +WL + R+ N
Sbjct: 3 GPTITLSTWDLAGQSVYYAAHQMFLTPSTLYLAVWNATLGEEGVENLRSWLLNIKRRELN 62
Query: 110 SNM 112
S +
Sbjct: 63 SKL 65
>SB_46290| Best HMM Match : Peptidase_A17 (HMM E-Value=1.3e-33)
Length = 1019
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 117 IGNKSDLESR-REVKKEEGEAFAREHG 142
+G K++L+S +E+ KE+ E F RE G
Sbjct: 978 VGAKTELDSAMKELNKEDAERFVREQG 1004
>SB_20004| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/27 (44%), Positives = 19/27 (70%), Gaps = 1/27 (3%)
Query: 117 IGNKSDLESR-REVKKEEGEAFAREHG 142
+G K++L+S +E+ KE+ E F RE G
Sbjct: 256 VGAKTELDSAMKELNKEDAERFVREQG 282
>SB_15122| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 709
Score = 27.9 bits (59), Expect = 6.7
Identities = 16/66 (24%), Positives = 28/66 (42%), Gaps = 3/66 (4%)
Query: 38 TIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRE---TF 94
TIG +G + +T+ ++ L IW R++ + + + V IT R
Sbjct: 618 TIGAAYGTKTVTVRNTRVTLGIWVCRDVGHHRNMVKYFVTRVTMEIWVLLITDRHGNMVM 677
Query: 95 NHLTTW 100
HL+ W
Sbjct: 678 PHLSVW 683
>SB_149| Best HMM Match : rve (HMM E-Value=6.3e-20)
Length = 2232
Score = 27.9 bits (59), Expect = 6.7
Identities = 12/46 (26%), Positives = 21/46 (45%)
Query: 120 KSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAK 165
K + + K + F HG++F T ++ A++ E F T K
Sbjct: 1473 KLQTDDGTDFKNRTFQTFLSSHGIIFFTTRSEMKASIVERFNRTLK 1518
>SB_58620| Best HMM Match : XH (HMM E-Value=1.6)
Length = 376
Score = 27.9 bits (59), Expect = 6.7
Identities = 15/58 (25%), Positives = 27/58 (46%)
Query: 92 ETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETS 149
+ FNHL++ + H N ML+ K DL+ + ++++G F+ TS
Sbjct: 83 QNFNHLSSIRYEVLDHRFKNHTRMLLDMKKDLDIVFRRIRTLKSKLSKQYGEAFLSTS 140
>SB_15869| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1420
Score = 27.5 bits (58), Expect = 8.9
Identities = 40/185 (21%), Positives = 71/185 (38%), Gaps = 18/185 (9%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 64
Y + ++IG GK+ L F P T G+E +D Q+K W
Sbjct: 358 YRGRIMLIGQDRAGKTSLKKSLLGLPFDPREVSTEGIEVDPSTFEVDIDQVK--NWRPTS 415
Query: 65 QEAFRSITRSYYRGAAGALLVYDITRRETFN-------HLTTWLEDARQHSNSNMVIMLI 117
++A S + ++V ++TR+E H + +HS+ + L
Sbjct: 416 RKAL----ASEFADDIARIMVDELTRKEPEEKQQHDDLHQSQQSLPGHEHSSHDEQTKL- 470
Query: 118 GNKSDLESRREVKKEEGEAFAREHGLVF-METSAKTAANVEEAFINTAKEIYEKIQEGV- 175
N+ D SR + + ++ F E SA + EE + + + KIQ+ +
Sbjct: 471 -NQDDSGSRSDTPPLPNDVAEEQNETTFSCEASASKELSAEEPEV-SLDNLQIKIQDAIP 528
Query: 176 FDINN 180
D+ N
Sbjct: 529 EDVTN 533
>SB_14238| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 799
Score = 27.5 bits (58), Expect = 8.9
Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)
Query: 4 AYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGV--EFG 44
AY +I + VGK+ L + RF+ + DL+ GV +FG
Sbjct: 16 AYYSSFISVNTLPVGKNITLTKLYSVRFEDIADLSEGVTGDFG 58
>SB_54640| Best HMM Match : TolA (HMM E-Value=1.7)
Length = 589
Score = 27.5 bits (58), Expect = 8.9
Identities = 14/37 (37%), Positives = 23/37 (62%), Gaps = 2/37 (5%)
Query: 139 REHGLVFMETSAKTAANVEEAF--INTAKEIYEKIQE 173
R++ +T+AK AN++EA I T+KEI ++E
Sbjct: 299 RDNAKEARDTTAKALANIDEAIKNITTSKEIMYSVKE 335
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.320 0.135 0.392
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,783,781
Number of Sequences: 59808
Number of extensions: 211548
Number of successful extensions: 769
Number of sequences better than 10.0: 133
Number of HSP's better than 10.0 without gapping: 99
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 603
Number of HSP's gapped (non-prelim): 153
length of query: 214
length of database: 16,821,457
effective HSP length: 79
effective length of query: 135
effective length of database: 12,096,625
effective search space: 1633044375
effective search space used: 1633044375
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 58 (27.5 bits)
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