GeneModel BLAST Result against tribolium

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001927-TA|BGIBMGA001927-PA|IPR000092|Polyprenyl
synthetase, IPR008949|Terpenoid synthase
         (592 letters)

Database: tribolium 
           317 sequences; 114,650 total letters

Searching....................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochr...    26   0.64 
EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1 pr...    23   5.9  
AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450 ...    23   5.9  
AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450 ...    23   5.9  
EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2 pr...    23   7.8  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   7.8  

>AF265213-1|AAF75277.1|  143|Tribolium castaneum putative cytochrome
           P450 monooxigenaseCYP4Q3 protein.
          Length = 143

 Score = 26.2 bits (55), Expect = 0.64
 Identities = 27/115 (23%), Positives = 46/115 (40%), Gaps = 10/115 (8%)

Query: 97  LLLAENVDEKIYKSAQDICLEIGTMFQIQ--DDFIDCFGDEIKTGKVGTDIQERKCTWLA 154
           +LLA + + ++    Q I  ++  +FQ Q  D+ +   GD +       ++QE K    A
Sbjct: 10  MLLANHKNVQVGDLVQKIAQKLQVLFQDQIVDEMVTVLGD-LHRKPTYNNLQEMKYLERA 68

Query: 155 VQALQRCTEAQRTV-------FKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEK 202
           ++   R   +   +       F  C G   P        +Y+  H P IY   EK
Sbjct: 69  IKESLRLYPSVHFISRKLGEDFVTCNGLKLPKSTITHLHIYDLHHNPDIYPDPEK 123


>EF125545-1|ABL73929.1|  274|Tribolium castaneum obstractor C1
           protein.
          Length = 274

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 532 KDPDDVASIKRLYEDLQLPKLYKEQ 556
           +DP+DV   +  Y DL L  + K +
Sbjct: 212 EDPEDVPGCEDYYGDLDLKSIRKSE 236


>AY337337-2|AAP94193.1|  491|Tribolium castaneum cytochrome P450
           monooxygenase protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 440 TSYYSIKLPVVLGLILTQNRENAPIEDIEGICFEI 474
           +SY S K   +L L+L    E A I+D EGI  E+
Sbjct: 259 SSYSSRKRLAMLDLLLKYKSEGANIDD-EGIREEV 292


>AF251548-1|AAF70178.1|  491|Tribolium castaneum cytochrome P450
           monooxigenase CYP4Q4 protein.
          Length = 491

 Score = 23.0 bits (47), Expect = 5.9
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 440 TSYYSIKLPVVLGLILTQNRENAPIEDIEGICFEI 474
           +SY S K   +L L+L    E A I+D EGI  E+
Sbjct: 259 SSYSSRKRLAMLDLLLKYKSEGANIDD-EGIREEV 292


>EF125546-1|ABL73930.1|  237|Tribolium castaneum obstractor C2
           protein.
          Length = 237

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 532 KDPDDVASIKRLYEDLQLPKLYK 554
           +DP+DV   +  Y+D+ L  L K
Sbjct: 212 EDPEDVPGCEDYYKDVDLKALKK 234


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 7.8
 Identities = 9/38 (23%), Positives = 20/38 (52%)

Query: 100 AENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIK 137
           A+ V + +YK+ QD   ++   +  +  ++    DE+K
Sbjct: 85  AKTVIQHLYKNKQDWWKQLEAKYDPEHTYVKAHEDELK 122


  Database: tribolium
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 114,650
  Number of sequences in database:  317
  
Lambda     K      H
   0.320    0.136    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,933
Number of Sequences: 317
Number of extensions: 5552
Number of successful extensions: 16
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 13
Number of HSP's gapped (non-prelim): 6
length of query: 592
length of database: 114,650
effective HSP length: 61
effective length of query: 531
effective length of database: 95,313
effective search space: 50611203
effective search space used: 50611203
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 46 (22.6 bits)