GeneModel BLAST Result against mosquito

BLASTP 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= BGIBMGA001927-TA|BGIBMGA001927-PA|IPR000092|Polyprenyl
synthetase, IPR008949|Terpenoid synthase
         (592 letters)

Database: mosquito 
           2123 sequences; 516,269 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9...    28   0.61 
DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1 pro...    26   2.4  

>AJ459962-1|CAD31061.1|  685|Anopheles gambiae prophenoloxidase 9
           protein.
          Length = 685

 Score = 28.3 bits (60), Expect = 0.61
 Identities = 18/73 (24%), Positives = 34/73 (46%), Gaps = 5/73 (6%)

Query: 398 IFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQ 457
           + N AL  T  G+H +  ++H N+ D     T     I++ ++S   IK  +  G  +  
Sbjct: 275 LLNSALNRTYPGRHANMVLSHVNRPDDDAVAT-----ILELESSLGRIKEAIQSGFAMAA 329

Query: 458 NRENAPIEDIEGI 470
           +    P++  +GI
Sbjct: 330 DGTRVPLDPKKGI 342


>DQ219482-1|ABB29886.1|  545|Anopheles gambiae cryptochrome 1
           protein.
          Length = 545

 Score = 26.2 bits (55), Expect = 2.4
 Identities = 11/25 (44%), Positives = 17/25 (68%)

Query: 535 DDVASIKRLYEDLQLPKLYKEQEDE 559
           D V  ++RL+E+L + KL  EQ+ E
Sbjct: 87  DSVTVLRRLFEELNIKKLCYEQDCE 111


  Database: mosquito
    Posted date:  Oct 5, 2007 11:13 AM
  Number of letters in database: 516,269
  Number of sequences in database:  2123
  
Lambda     K      H
   0.320    0.136    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 565,642
Number of Sequences: 2123
Number of extensions: 22766
Number of successful extensions: 44
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 43
Number of HSP's gapped (non-prelim): 2
length of query: 592
length of database: 516,269
effective HSP length: 68
effective length of query: 524
effective length of database: 371,905
effective search space: 194878220
effective search space used: 194878220
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 50 (24.2 bits)