Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001927-TA|BGIBMGA001927-PA|IPR000092|Polyprenyl
synthetase, IPR008949|Terpenoid synthase
(592 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At4g17190.1 68417.m02586 farnesyl pyrophosphate synthetase 2 (FP... 279 4e-75
At5g47770.1 68418.m05901 farnesyl pyrophosphate synthetase 1, mi... 273 2e-73
At4g17190.2 68417.m02585 farnesyl pyrophosphate synthetase 2 (FP... 208 6e-54
At3g14550.1 68416.m01843 geranylgeranyl pyrophosphate synthase, ... 48 2e-05
At3g14510.1 68416.m01837 geranylgeranyl pyrophosphate synthase, ... 48 2e-05
At3g14530.1 68416.m01841 geranylgeranyl pyrophosphate synthase, ... 47 3e-05
At2g18640.1 68415.m02171 geranylgeranyl pyrophosphate synthase, ... 46 5e-05
At3g29430.1 68416.m03697 geranylgeranyl pyrophosphate synthase, ... 46 9e-05
At2g18620.1 68415.m02168 geranylgeranyl pyrophosphate synthase, ... 44 2e-04
At2g23800.1 68415.m02842 geranylgeranyl pyrophosphate synthase (... 42 0.002
At3g32040.1 68416.m04072 geranylgeranyl pyrophosphate synthase, ... 40 0.004
At1g49530.1 68414.m05551 geranylgeranyl pyrophosphate synthase (... 40 0.005
At2g34630.1 68415.m04254 geranyl diphosphate synthase, putative ... 38 0.014
At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS) id... 35 0.13
At4g36810.1 68417.m05221 geranylgeranyl pyrophosphate synthase (... 31 2.8
At4g22660.1 68417.m03270 F-box family protein contains Pfam PF00... 31 2.8
At4g02570.1 68417.m00351 cullin family protein similar to cullin... 31 2.8
At3g20160.1 68416.m02556 geranylgeranyl pyrophosphate synthase, ... 31 2.8
At5g60740.1 68418.m07621 ABC transporter family protein similar ... 30 3.8
At2g29440.1 68415.m03577 glutathione S-transferase, putative 30 3.8
At5g51030.1 68418.m06326 short-chain dehydrogenase/reductase (SD... 30 5.0
At4g22165.1 68417.m03204 F-box family protein contains F-box dom... 29 6.6
At1g27340.1 68414.m03330 F-box family protein contains Pfam PF00... 29 6.6
At5g56360.1 68418.m07034 calmodulin-binding protein similar to a... 29 8.7
At4g20320.1 68417.m02967 CTP synthase, putative / UTP--ammonia l... 29 8.7
>At4g17190.1 68417.m02586 farnesyl pyrophosphate synthetase 2 (FPS2)
/ FPP synthetase 2 / farnesyl diphosphate synthase 2
identical to SP|Q43315 Farnesyl pyrophosphate synthetase
2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate
synthetase 2) [Includes: Dimethylallyltransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)]
{Arabidopsis thaliana}
Length = 342
Score = 279 bits (684), Expect = 4e-75
Identities = 135/342 (39%), Positives = 208/342 (60%), Gaps = 3/342 (0%)
Query: 250 IAKERETFQDAWKGIIDNLTTNKKFTQLPELGSWVKKVLEYNVKGGKKIRGITTVLAYEL 309
+A + TF D + + +L + F E W++++L+YNV+GGK RG++ V +Y+L
Sbjct: 1 MADLKSTFLDVYSVLKSDLLQDPSFEFTHESRQWLERMLDYNVRGGKLNRGLSVVDSYKL 60
Query: 310 FEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAIN 369
++ +++TE+ L+ GWC E LQAY ++ DDIMD S TRRG PCW+R P VG+ AIN
Sbjct: 61 LKQGQDLTEKETFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRKPKVGMIAIN 120
Query: 370 DAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTT 429
D IL+ I+ ILK +F + Y D++D+FNE T+ GQ +D ++D S ++
Sbjct: 121 DGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEFQTACGQMIDLITTFDGEKDLSKYSL 180
Query: 430 ERYYSIVKYKTSYYSIKLPVVLGLILT-QNRENAPIEDIEGICFEIGKLFQIQDDFMDCF 488
+ + IV+YKT+YYS LPV L++ +N EN D++ + ++G FQ+QDD++DCF
Sbjct: 181 QIHRRIVEYKTAYYSFYLPVACALLMAGENLENH--TDVKTVLVDMGIYFQVQDDYLDCF 238
Query: 489 GNETVTGKKGTDIQEGKCSWLAVNALQRCNDAQRTLFAQNYASKDPDDVASIKRLYEDLQ 548
+ GK GTDI++ KCSWL V AL+RC++ Q + +NY +P +VA +K LY++L
Sbjct: 239 ADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKAEPSNVAKVKALYKELD 298
Query: 549 LPKLYKEQEDEIHSGILKKINALPSSTSPAIFFKLLDMIFKR 590
L + E E E + + K I A S A+ L I+KR
Sbjct: 299 LEGAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSFLAKIYKR 340
Score = 123 bits (297), Expect = 3e-28
Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 4/189 (2%)
Query: 42 DWLKKTLWRTSMGQHLDHVTG-NRKTDYSSFTLDRXXXXXXXXXXXXXXNLPVSLGLLLA 100
D + ++T+ GQ +D +T + + D S ++L LPV+ LL+A
Sbjct: 148 DLFNEVEFQTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMA 207
Query: 101 -ENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQ 159
EN++ + + + +++G FQ+QDD++DCF D GK+GTDI++ KC+WL V+AL+
Sbjct: 208 GENLEN--HTDVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALE 265
Query: 160 RCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEA 219
RC+E Q + YG +EP++V ++K LY++L L + EK Y+ + + IE +A
Sbjct: 266 RCSEEQTKILYENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESYEKLTKLIEAHQSKA 325
Query: 220 ARVLFKKLL 228
+ + K L
Sbjct: 326 IQAVLKSFL 334
>At5g47770.1 68418.m05901 farnesyl pyrophosphate synthetase 1,
mitochondrial (FPS1) / FPP synthetase 1 / farnesyl
diphosphate synthase 1 identical to SP|Q09152 Farnesyl
pyrophosphate synthetase 1, mitochondrial precursor (FPP
synthetase 1) (FPS 1) (Farnesyl diphosphate synthetase
1) [Includes: Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10)] {Arabidopsis
thaliana}
Length = 384
Score = 273 bits (670), Expect = 2e-73
Identities = 132/338 (39%), Positives = 204/338 (60%), Gaps = 3/338 (0%)
Query: 254 RETFQDAWKGIIDNLTTNKKFTQLPELGSWVKKVLEYNVKGGKKIRGITTVLAYELFEKP 313
+ TF + + + +L + F E WV ++L+YNV+GGK RG++ V +++L ++
Sbjct: 47 KSTFLNVYSVLKSDLLHDPSFEFTNESRLWVDRMLDYNVRGGKLNRGLSVVDSFKLLKQG 106
Query: 314 ENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAINDAIL 373
++TE+ V L+ GWC E LQAY ++ DDIMD S TRRG PCW+R+P VG+ AIND IL
Sbjct: 107 NDLTEQEVFLSCALGWCIEWLQAYFLVLDDIMDNSVTRRGQPCWFRVPQVGMVAINDGIL 166
Query: 374 VYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTERYY 433
+ I+ ILK +F Y D++D+FNE L T+ GQ +D ++D + ++ +
Sbjct: 167 LRNHIHRILKKHFRDKPYYVDLVDLFNEVELQTACGQMIDLITTFEGEKDLAKYSLSIHR 226
Query: 434 SIVKYKTSYYSIKLPVVLGLILT-QNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNET 492
IV+YKT+YYS LPV L++ +N EN D++ + ++G FQ+QDD++DCF +
Sbjct: 227 RIVQYKTAYYSFYLPVACALLMAGENLENH--IDVKNVLVDMGIYFQVQDDYLDCFADPE 284
Query: 493 VTGKKGTDIQEGKCSWLAVNALQRCNDAQRTLFAQNYASKDPDDVASIKRLYEDLQLPKL 552
GK GTDI++ KCSWL V AL+RC++ Q + +NY DP +VA +K LY++L L +
Sbjct: 285 TLGKIGTDIEDFKCSWLVVKALERCSEEQTKILYENYGKPDPSNVAKVKDLYKELDLEGV 344
Query: 553 YKEQEDEIHSGILKKINALPSSTSPAIFFKLLDMIFKR 590
+ E E + + + I S A+ L I+KR
Sbjct: 345 FMEYESKSYEKLTGAIEGHQSKAIQAVLKSFLAKIYKR 382
Score = 119 bits (286), Expect = 6e-27
Identities = 59/181 (32%), Positives = 102/181 (56%), Gaps = 4/181 (2%)
Query: 50 RTSMGQHLDHVTG-NRKTDYSSFTLDRXXXXXXXXXXXXXXNLPVSLGLLLA-ENVDEKI 107
+T+ GQ +D +T + D + ++L LPV+ LL+A EN++ I
Sbjct: 198 QTACGQMIDLITTFEGEKDLAKYSLSIHRRIVQYKTAYYSFYLPVACALLMAGENLENHI 257
Query: 108 YKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQRCTEAQRT 167
+++ +++G FQ+QDD++DCF D GK+GTDI++ KC+WL V+AL+RC+E Q
Sbjct: 258 --DVKNVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTK 315
Query: 168 VFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEAARVLFKKL 227
+ YG +P++V ++K LY++L L ++ E Y+ + IE +A + + K
Sbjct: 316 ILYENYGKPDPSNVAKVKDLYKELDLEGVFMEYESKSYEKLTGAIEGHQSKAIQAVLKSF 375
Query: 228 L 228
L
Sbjct: 376 L 376
>At4g17190.2 68417.m02585 farnesyl pyrophosphate synthetase 2 (FPS2)
/ FPP synthetase 2 / farnesyl diphosphate synthase 2
identical to SP|Q43315 Farnesyl pyrophosphate synthetase
2 (FPP synthetase 2) (FPS 2) (Farnesyl diphosphate
synthetase 2) [Includes: Dimethylallyltransferase (EC
2.5.1.1); Geranyltranstransferase (EC 2.5.1.10)]
{Arabidopsis thaliana}
Length = 247
Score = 208 bits (509), Expect = 6e-54
Identities = 101/247 (40%), Positives = 149/247 (60%), Gaps = 3/247 (1%)
Query: 345 MDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALL 404
MD S TRRG PCW+R P VG+ AIND IL+ I+ ILK +F + Y D++D+FNE
Sbjct: 1 MDNSVTRRGQPCWFRKPKVGMIAINDGILLRNHIHRILKKHFREMPYYVDLVDLFNEVEF 60
Query: 405 YTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILT-QNRENAP 463
T+ GQ +D ++D S ++ + + IV+YKT+YYS LPV L++ +N EN
Sbjct: 61 QTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMAGENLENHT 120
Query: 464 IEDIEGICFEIGKLFQIQDDFMDCFGNETVTGKKGTDIQEGKCSWLAVNALQRCNDAQRT 523
D++ + ++G FQ+QDD++DCF + GK GTDI++ KCSWL V AL+RC++ Q
Sbjct: 121 --DVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALERCSEEQTK 178
Query: 524 LFAQNYASKDPDDVASIKRLYEDLQLPKLYKEQEDEIHSGILKKINALPSSTSPAIFFKL 583
+ +NY +P +VA +K LY++L L + E E E + + K I A S A+
Sbjct: 179 ILYENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESYEKLTKLIEAHQSKAIQAVLKSF 238
Query: 584 LDMIFKR 590
L I+KR
Sbjct: 239 LAKIYKR 245
Score = 123 bits (297), Expect = 3e-28
Identities = 62/189 (32%), Positives = 107/189 (56%), Gaps = 4/189 (2%)
Query: 42 DWLKKTLWRTSMGQHLDHVTG-NRKTDYSSFTLDRXXXXXXXXXXXXXXNLPVSLGLLLA 100
D + ++T+ GQ +D +T + + D S ++L LPV+ LL+A
Sbjct: 53 DLFNEVEFQTACGQMIDLITTFDGEKDLSKYSLQIHRRIVEYKTAYYSFYLPVACALLMA 112
Query: 101 -ENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGKVGTDIQERKCTWLAVQALQ 159
EN++ + + + +++G FQ+QDD++DCF D GK+GTDI++ KC+WL V+AL+
Sbjct: 113 GENLEN--HTDVKTVLVDMGIYFQVQDDYLDCFADPETLGKIGTDIEDFKCSWLVVKALE 170
Query: 160 RCTEAQRTVFKACYGSSEPAHVERIKRLYEDLHLPQIYKHQEKAMYDNIIRQIENIPIEA 219
RC+E Q + YG +EP++V ++K LY++L L + EK Y+ + + IE +A
Sbjct: 171 RCSEEQTKILYENYGKAEPSNVAKVKALYKELDLEGAFMEYEKESYEKLTKLIEAHQSKA 230
Query: 220 ARVLFKKLL 228
+ + K L
Sbjct: 231 IQAVLKSFL 239
>At3g14550.1 68416.m01843 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to SP|Q43133
Geranylgeranyl pyrophosphate synthetase, chloroplast
precursor (GGPP synthetase) (GGPS) [Includes:
Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)] {Sinapis alba};
contains Pfam profile PF00348: Polyprenyl synthetase
Length = 360
Score = 48.0 bits (109), Expect = 2e-05
Identities = 60/249 (24%), Positives = 104/249 (41%), Gaps = 20/249 (8%)
Query: 284 VKKVLEYNV-KGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMND 342
V++ + Y++ GGK++R + + EL E A A EM+ +++D
Sbjct: 93 VQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEAT-------AMSAACAVEMIHTSSLIHD 145
Query: 343 DI--MDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFN 400
D+ MD + RRG P +++ + + L+ + + + G I +
Sbjct: 146 DLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPERMIRAVVE 205
Query: 401 --EALLYTSM--GQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILT 456
A+ T + GQ +D A N L E I +KT+ ++ VLG+I+
Sbjct: 206 LARAIGTTGLVAGQMIDLASERLNPDKVGL---EHLEFIHLHKTAAL-LEAAAVLGVIMG 261
Query: 457 QNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGK-KGTDIQEGKCSWLAVNALQ 515
E IE + IG LFQ+ DD +D + GK G D+ GK ++ + L+
Sbjct: 262 GGTEEE-IEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLE 320
Query: 516 RCNDAQRTL 524
R + L
Sbjct: 321 RSKEVAEKL 329
Score = 33.5 bits (73), Expect = 0.40
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 2/70 (2%)
Query: 95 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 153
LG+++ +E+I K + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 256 LGVIMGGGTEEEIEK-LRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 314
Query: 154 AVQALQRCTE 163
+ L+R E
Sbjct: 315 RLIGLERSKE 324
>At3g14510.1 68416.m01837 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to
gi:9294375; similar to geranylgeranyl pyrophosphate
synthetase GB:P34802 [Arabidopsis thaliana]
Length = 284
Score = 48.0 bits (109), Expect = 2e-05
Identities = 59/249 (23%), Positives = 103/249 (41%), Gaps = 20/249 (8%)
Query: 284 VKKVLEYNV-KGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMND 342
V++ + Y++ GGK++R + + EL E A A EM+ +++D
Sbjct: 17 VQEAVRYSLLAGGKRVRPLLCIAVCELVGGDEAT-------AMSAACAVEMIHTSSLIHD 69
Query: 343 DI--MDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFN 400
D+ MD + RRG P +++ + + L+ + + + G I +
Sbjct: 70 DLPCMDNADLRRGKPTNHKVFGEDMAVLAGDALLALAFEHMTVVSSGLVASERMIRAVVE 129
Query: 401 EALLYTSMG----QHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILT 456
A + G Q +D + N D L ER I +KT+ ++ V+G I+
Sbjct: 130 LARAIGTKGLVAGQVVDLSSERLNPHDVGL---ERLEFIHLHKTAAL-LEAAAVIGAIMG 185
Query: 457 QNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGK-KGTDIQEGKCSWLAVNALQ 515
E IE + IG LFQ+ DD +D + GK G D+ GK ++ + L+
Sbjct: 186 GGTEEE-IEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGLE 244
Query: 516 RCNDAQRTL 524
R + L
Sbjct: 245 RSREVAEKL 253
Score = 31.9 bits (69), Expect = 1.2
Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 95 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 153
+G ++ +E+I K + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 180 IGAIMGGGTEEEIEK-LRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 238
Query: 154 AVQALQRCTE 163
+ L+R E
Sbjct: 239 RLIGLERSRE 248
>At3g14530.1 68416.m01841 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to SP|P34802
Geranylgeranyl pyrophosphate synthetase, chloroplast
precursor (GGPP synthetase) (GGPS) [Includes:
Dimethylallyltransferase (EC 2.5.1.1);
Geranyltranstransferase (EC 2.5.1.10);
Farnesyltranstransferase (EC 2.5.1.29)] {Arabidopsis
thaliana}; contains Pfam profile PF00348: Polyprenyl
synthetase
Length = 360
Score = 47.2 bits (107), Expect = 3e-05
Identities = 60/250 (24%), Positives = 108/250 (43%), Gaps = 22/250 (8%)
Query: 284 VKKVLEYNV-KGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMND 342
+++ + Y++ GGK++R + + A EL E A A EM+ +++D
Sbjct: 93 IQEAVRYSLLAGGKRVRPLLCIAACELVGGDEAT-------AMSAACAVEMIHTSSLIHD 145
Query: 343 DI--MDGSSTRRGVPCWYRMPDVGLGAI-NDAILV--YGSIYEILKIYFGKAKEYADILD 397
D+ MD + RRG P +++ + + DA+L + + + K +++
Sbjct: 146 DLPCMDNADLRRGKPTNHKVYGEDMAVLAGDALLALAFEHMTVVSSGLVAPEKMIRAVVE 205
Query: 398 IFNEALLYTSM--GQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLIL 455
+ A+ T + GQ +D A N L E I +KT+ ++ VLG+I+
Sbjct: 206 LAR-AIGTTGLVAGQMIDLASERLNPDKVGL---EHLEFIHLHKTAAL-LEAAAVLGVIM 260
Query: 456 TQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGK-KGTDIQEGKCSWLAVNAL 514
E IE + IG LFQ+ DD +D + GK G D+ GK ++ + L
Sbjct: 261 GGGTEQE-IEKLRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYPRLIGL 319
Query: 515 QRCNDAQRTL 524
+ + L
Sbjct: 320 EGSREVAEKL 329
Score = 29.5 bits (63), Expect = 6.6
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 95 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 153
LG+++ +++I K + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 256 LGVIMGGGTEQEIEK-LRKYARCIGLLFQVVDDILDVTKSTEELGKTAGKDVMAGKLTYP 314
Query: 154 AVQALQRCTE 163
+ L+ E
Sbjct: 315 RLIGLEGSRE 324
>At2g18640.1 68415.m02171 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to
gi:1944371; contains GB:L22347
Length = 372
Score = 46.4 bits (105), Expect = 5e-05
Identities = 56/241 (23%), Positives = 98/241 (40%), Gaps = 17/241 (7%)
Query: 284 VKKVLEYNV-KGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMND 342
+ K + Y + GGK++R I + A EL E RLA A EM+ ++ D
Sbjct: 108 IHKAMRYAILAGGKRVRPILCLAACELVGGEE-------RLAIQAACAVEMIHTMSLIKD 160
Query: 343 DI--MDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFN 400
D+ MD RRG P +++ + ++ L+ + + + K + ++
Sbjct: 161 DLPCMDNDDLRRGKPTTHKVFGESVAILSGGALLALAFEHLTEADVSSKKMVRAVKELAK 220
Query: 401 E-ALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNR 459
GQ D + + D L E Y + +KT ++ V+G ++
Sbjct: 221 SIGTKGLVAGQAKDLSSEGLEQNDVGLEDLE-YIHV--HKTGSL-LEASAVIGAVIGGGT 276
Query: 460 ENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGK-KGTDIQEGKCSWLAVNALQRCN 518
E IE + IG LFQ+ DD +D + GK G D GK ++ V +++
Sbjct: 277 EKE-IEKVRNFARCIGLLFQVVDDILDETKSSEELGKTAGKDKVAGKLTYPKVIGVEKSK 335
Query: 519 D 519
+
Sbjct: 336 E 336
>At3g29430.1 68416.m03697 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to gi:413730;
similar to geranylgeranyl pyrophosphate synthase,
chloroplast precursor GB:P34802 from [Arabidopsis
thaliana]
Length = 357
Score = 45.6 bits (103), Expect = 9e-05
Identities = 60/249 (24%), Positives = 101/249 (40%), Gaps = 20/249 (8%)
Query: 284 VKKVLEYNV-KGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMND 342
+++ + Y++ GGK++R + + A EL E A A EM+ +++D
Sbjct: 90 IQEAVRYSLLAGGKRVRPLLCIAACELVGGDEAT-------AMSAACAVEMIHTSSLIHD 142
Query: 343 DI--MDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFN 400
D+ MD + RRG P ++ + + L+ + + + G I +
Sbjct: 143 DLPCMDDADLRRGKPTNHKEFGEDMAVLAGDALLALAFEHMTFVSNGLVAPERMIRAVME 202
Query: 401 EALLYTSMG----QHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILT 456
A + G Q D N D L ER I +KT+ ++ VLG I+
Sbjct: 203 LAKAIGTKGLVAGQVTDLCSQGLNPDDVGL---ERLEFIHLHKTAAL-LEAAAVLGAIMG 258
Query: 457 QNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGK-KGTDIQEGKCSWLAVNALQ 515
E IE + IG LFQ+ DD +D + GK G D+ GK ++ + L+
Sbjct: 259 GGTEEE-IEKLRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYPRLIGLE 317
Query: 516 RCNDAQRTL 524
R + L
Sbjct: 318 RSREVAEKL 326
Score = 32.7 bits (71), Expect = 0.71
Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 95 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 153
LG ++ +E+I K + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 253 LGAIMGGGTEEEIEK-LRKYARCIGLLFQVVDDILDVTESTKELGKTAGKDVMAGKLTYP 311
Query: 154 AVQALQRCTE 163
+ L+R E
Sbjct: 312 RLIGLERSRE 321
>At2g18620.1 68415.m02168 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to gi:413730
to geranylgeranyl pyrophosphate synthase, chloroplast
precursor GB:P34802 from [Arabidopsis thaliana]
synonymous with farnesyltranstransferase
Length = 347
Score = 44.4 bits (100), Expect = 2e-04
Identities = 62/268 (23%), Positives = 115/268 (42%), Gaps = 22/268 (8%)
Query: 284 VKKVLEYNVKG-GKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMND 342
+ + + Y++ GK++R + + A EL E+V A A EM+ +++D
Sbjct: 82 IHEAIRYSLLARGKRVRPVLCIAACELVGGEESV-------ALPAACAVEMIHTMSLIHD 134
Query: 343 DI--MDGSSTRRGVPCWYRM--PDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDI 398
D+ MD RRG P +++ DV + A DA++ + + A+ I ++
Sbjct: 135 DLPCMDNDDLRRGKPTNHKVFGEDVAVLA-GDALISFAFEHLATSTAVSPARVVRAIGEL 193
Query: 399 FNEALLYTSM--GQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILT 456
+A+ + GQ +D ++ D L E I +KT+ ++ VLG I+
Sbjct: 194 A-KAIGSKGLVAGQVVDLTSGGMDQNDVGLEVLE---FIHVHKTAVL-LEAATVLGAIVG 248
Query: 457 QNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGK-KGTDIQEGKCSWLAVNALQ 515
+ +E + IG LFQ+ DD +D + GK G D+ K ++ + L+
Sbjct: 249 GGSDEE-VEKLRRFARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYPKLMGLE 307
Query: 516 RCNDAQRTLFAQNYASKDPDDVASIKRL 543
+ D L + + D + +K L
Sbjct: 308 KSKDFADKLLSDAHEQLHGFDSSRVKPL 335
Score = 30.3 bits (65), Expect = 3.8
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
Query: 95 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 153
LG ++ DE++ K + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 243 LGAIVGGGSDEEVEKLRR-FARCIGLLFQVVDDILDVTKSSEELGKTAGKDLIADKLTYP 301
Query: 154 AVQALQR 160
+ L++
Sbjct: 302 KLMGLEK 308
>At2g23800.1 68415.m02842 geranylgeranyl pyrophosphate synthase
(GGPS2) (GGPS5) / GGPP synthetase /
farnesyltranstransferase identical to GB:U44876;
sequence disagrees at N-Terminus, sequence submitted has
been confirmed from three electropherograms.
Length = 376
Score = 41.5 bits (93), Expect = 0.002
Identities = 57/263 (21%), Positives = 106/263 (40%), Gaps = 19/263 (7%)
Query: 269 TTNKKFTQLPELGSWVK--KVLEYNV-KGGKKIRGITTVLAYELFEKPENVTEEMVRLAR 325
+ NK + +G +K + + Y + GK++R I + + EL EN A
Sbjct: 95 SVNKALEEAIPVGEPLKIHEAMRYAILAAGKRVRPILCLASCELVGGQENA-------AM 147
Query: 326 VAGWCTEMLQAYLIMNDDI--MDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILK 383
A EM+ ++ DD+ MD RRG P +++ G+ ++ L+ + +
Sbjct: 148 PAACAVEMIHTMSLIKDDLPCMDNDDLRRGKPTTHKVYGEGVAILSGGALLSLAFEHMTT 207
Query: 384 IYFGKAKEYADILDIFNE-ALLYTSMGQHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSY 442
+ + ++ GQ +D + + + L E I +KT+
Sbjct: 208 AEISSERMVWAVRELARSIGTRGLVAGQAMDISSEGLDLNEVGL---EHLEFIHVHKTAV 264
Query: 443 YSIKLPVVLGLILTQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGK-KGTDI 501
++ VLG I+ + IE + IG LFQ+ DD +D + GK G D
Sbjct: 265 L-LETAAVLGAIIGGGSDEE-IESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQ 322
Query: 502 QEGKCSWLAVNALQRCNDAQRTL 524
GK ++ + L++ + + L
Sbjct: 323 LAGKLTYPKLIGLEKSKEFVKRL 345
Score = 30.3 bits (65), Expect = 3.8
Identities = 22/77 (28%), Positives = 37/77 (48%), Gaps = 2/77 (2%)
Query: 95 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 153
LG ++ DE+I +S + IG +FQ+ DD +D + GK G D K T+
Sbjct: 272 LGAIIGGGSDEEI-ESVRKFARCIGLLFQVVDDILDETKSSEELGKTAGKDQLAGKLTYP 330
Query: 154 AVQALQRCTEAQRTVFK 170
+ L++ E + + K
Sbjct: 331 KLIGLEKSKEFVKRLTK 347
>At3g32040.1 68416.m04072 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative identical to
gi:413730; similar to GB:P34802 from [Arabidopsis
thaliana] (Plant Physiol. 104 (4), 1469-1470 (1994))
Length = 360
Score = 40.3 bits (90), Expect = 0.004
Identities = 58/249 (23%), Positives = 101/249 (40%), Gaps = 20/249 (8%)
Query: 284 VKKVLEYNV-KGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMND 342
+++ + Y++ GGK++R + + A EL E A A EM+ +++D
Sbjct: 93 IQEAVRYSLLAGGKRVRPLLCIAACELVGGDEAT-------AMSAACAVEMIHTSSLIHD 145
Query: 343 DI--MDGSSTRRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFN 400
D+ MD + RRG P +++ + + L+ + + + G I +
Sbjct: 146 DLPCMDDADLRRGKPTNHKVFGEHMAVLAGDALLALAFEHMTVVSSGLVAPERMIRSVTE 205
Query: 401 EALLYTSMG----QHLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILT 456
A + G Q D N D L ER I +KT+ ++ VLG I+
Sbjct: 206 LAKAIGTKGLVAGQVSDLCSQGLNPYDVGL---ERLEFIHLHKTAAL-LEAAAVLGAIIG 261
Query: 457 QNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGNETVTGK-KGTDIQEGKCSWLAVNALQ 515
E I+ + IG LFQ+ DD +D + GK G D+ K ++ + L+
Sbjct: 262 GGTEEE-IQKLRKYGRCIGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTYPRLIGLE 320
Query: 516 RCNDAQRTL 524
R + L
Sbjct: 321 RSREVAEKL 329
Score = 35.9 bits (79), Expect = 0.076
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 95 LGLLLAENVDEKIYKSAQ-DICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTW 152
LG ++ +E+I K + C IG +FQ+ DD ID + GK G D+ RK T+
Sbjct: 256 LGAIIGGGTEEEIQKLRKYGRC--IGLLFQVVDDIIDVTESTEELGKTAGKDVMARKLTY 313
Query: 153 LAVQALQRCTE 163
+ L+R E
Sbjct: 314 PRLIGLERSRE 324
>At1g49530.1 68414.m05551 geranylgeranyl pyrophosphate synthase
(GGPS6) / GGPP synthetase / farnesyltranstransferase
identical to gi:2578821; similar to geranyl geranyl
pyrophosphate synthase GI:2578822 from [Arabidopsis
thaliana]
Length = 336
Score = 39.9 bits (89), Expect = 0.005
Identities = 66/298 (22%), Positives = 121/298 (40%), Gaps = 24/298 (8%)
Query: 238 RCSSAYAASVSQIAKERETFQDAWKGIIDNLTTNKKFTQLPELGSWVKKVLEYNV-KGGK 296
R SS ++ I+ + + K + +++ F L E V K + Y + GGK
Sbjct: 21 RLSSIASSDSEFISYMKNKAKSINKALDNSIPLCNNFVPLWEPVLEVHKAMRYTLLPGGK 80
Query: 297 KIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDI--MDGSSTRRGV 354
++R + ++A EL E+ A A EM+ A ++ DD+ MD S RRG
Sbjct: 81 RVRPMLCLVACELVGGQEST-------AMPAACAVEMIHAASLILDDLPCMDDDSLRRGK 133
Query: 355 PCWYRMPDVGLGAINDAILVYGSIYEIL-KIYFGKAKEYA-DILDIFNEALLYTSM--GQ 410
P +++ + L ++ + L G E + A+ + GQ
Sbjct: 134 PTNHKVFGEKTSILASNALRSLAVKQTLASTSLGVTSERVLRAVQEMARAVGTEGLVAGQ 193
Query: 411 HLDYA---MAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIEDI 467
D A M+ +N+ D RY ++ + ++ V+G I+ + IE +
Sbjct: 194 AADLAGERMSFKNEDDEL-----RYLELMHVHKTAVLVEAAAVVGAIMGGGSDEE-IERL 247
Query: 468 EGICFEIGKLFQIQDDFMDCFGNETVTGK-KGTDIQEGKCSWLAVNALQRCNDAQRTL 524
+ +G +FQ+ DD +D + GK G D+ GK ++ V + + + L
Sbjct: 248 KSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYPKVMGVDNAREYAKRL 305
Score = 29.1 bits (62), Expect = 8.7
Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)
Query: 95 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 153
+G ++ DE+I + + +G MFQ+ DD +D + GK G D+ K T+
Sbjct: 232 VGAIMGGGSDEEIER-LKSYARCVGLMFQVMDDVLDETKSSEELGKTAGKDLITGKLTYP 290
Query: 154 AVQALQRCTE 163
V + E
Sbjct: 291 KVMGVDNARE 300
>At2g34630.1 68415.m04254 geranyl diphosphate synthase, putative /
GPPS, putative / dimethylallyltransferase, putative /
prenyl transferase, putative identical to GI:11322965 A.
thaliana geranyl diphosphate synthase
Length = 321
Score = 38.3 bits (85), Expect = 0.014
Identities = 46/195 (23%), Positives = 83/195 (42%), Gaps = 14/195 (7%)
Query: 311 EKPENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRGVPCWYRMPDVGLGAIND 370
E + VT E+ R TEM+ +++DD++D + TRRGV +V +G N
Sbjct: 49 ESTDIVTSELRVRQRGIAEITEMIHVASLLHDDVLDDADTRRGVGSL----NVVMG--NK 102
Query: 371 AILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQHLDYAMAHRNKQDYSLFTTE 430
++ G A + +++ + A+ + G+ ++ + +Q YS+ +
Sbjct: 103 MSVLAGDFLLSRACGALAALKNTEVVALLATAVEHLVTGETMEITSS--TEQRYSM---D 157
Query: 431 RYYSIVKYKTSYYSIKLPVVLGLILTQNRENAPIEDIEGICFEIGKLFQIQDDFMDCFGN 490
Y YKT+ + ++ Q E A + G +G FQ+ DD +D G
Sbjct: 158 YYMQKTYYKTASLISNSCKAVAVLTGQTAEVAVLAFEYGR--NLGLAFQLIDDILDFTGT 215
Query: 491 ETVTGKKG-TDIQEG 504
GK +DI+ G
Sbjct: 216 SASLGKGSLSDIRHG 230
>At1g78510.1 68414.m09151 solanesyl diphosphate synthase (SPS)
identical to solanesyl diphosphate synthase [Arabidopsis
thaliana] GI:19911233; contains Pfam profile PF00348:
Polyprenyl synthetase
Length = 406
Score = 35.1 bits (77), Expect = 0.13
Identities = 53/229 (23%), Positives = 96/229 (41%), Gaps = 25/229 (10%)
Query: 294 GGKKIR-GITTVLAYELFEKP--ENVTEEMVRLARVAGWCTEMLQAYLIMNDDIMDGSST 350
GGK++R G+ ++++ E + +T E RLA + EM+ +++DD++D S
Sbjct: 124 GGKRMRPGLVFLVSHATAELAGLKELTTEHRRLAEII----EMIHTASLIHDDVLDESDM 179
Query: 351 RRGVPCWYRMPDVGLGAINDAILVYGSIYEILKIYFGKAKEYADILDIFNEALLYTSMGQ 410
RRG + L A+L ++ Y E +++ + ++ +
Sbjct: 180 RRGKETVHE-----LFGTRVAVLAGDFMFAQASWYLANL-ENLEVIKLISQVI------- 226
Query: 411 HLDYAMAHRNKQDYSLFTTERYYSIVKYKTSYYSIKLPV--VLGLILTQNRENAPIEDIE 468
D+A + KQ SLF + K+ Y + L G + E E +
Sbjct: 227 -KDFA-SGEIKQASSLFDCDTKLDEYLLKSFYKTASLVAASTKGAAIFSRVEPDVTEQMY 284
Query: 469 GICFEIGKLFQIQDDFMDCFGNETVTGK-KGTDIQEGKCSWLAVNALQR 516
+G FQI DD +D + GK G+D+ +G + + AL+R
Sbjct: 285 EFGKNLGLSFQIVDDILDFTQSTEQLGKPAGSDLAKGNLTAPVIFALER 333
>At4g36810.1 68417.m05221 geranylgeranyl pyrophosphate synthase
(GGPS1) / GGPP synthetase / farnesyltranstransferase
identical to GI:413730 to geranylgeranyl pyrophosphate
synthase, chloroplast precursor GB:P34802 from
[Arabidopsis thaliana] synonymous with
farnesyltranstransferase
Length = 371
Score = 30.7 bits (66), Expect = 2.8
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
Query: 95 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 153
LG ++ D++I + + IG +FQ+ DD +D + GK G D+ K T+
Sbjct: 267 LGAIVGGGSDDEIER-LRKFARCIGLLFQVVDDILDVTKSSKELGKTAGKDLIADKLTYP 325
Query: 154 AVQALQRCTE 163
+ L++ E
Sbjct: 326 KIMGLEKSRE 335
>At4g22660.1 68417.m03270 F-box family protein contains Pfam
PF00646: F-box domain; similar to F-box protein family,
AtFBX7 (GI:20197899) [Arabidopsis thaliana]
Length = 396
Score = 30.7 bits (66), Expect = 2.8
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 214 NIPIEAARVLFKKLLDITFQSAGCRCSSAYAASVSQIAKER 254
++P++ ++FK+L F+ A CSS Y+AS + K +
Sbjct: 12 DLPLDLLNLVFKRLSFANFRQAKSVCSSWYSASKQSVPKNQ 52
>At4g02570.1 68417.m00351 cullin family protein similar to cullin 3
[Homo sapiens] GI:3639052; contains Pfam profile
PF00888: Cullin family
Length = 738
Score = 30.7 bits (66), Expect = 2.8
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 101 ENVDEKIYKSAQDICLEIGT--MFQIQDDFIDCFGDEIKT---GKVGTDIQERKCTWLAV 155
E +D + K+ DI +EIG M + ++DF + + K + IQE C +
Sbjct: 163 EQIDRALLKNVLDIYVEIGMGQMERYEEDFESFMLQDTSSYYSRKASSWIQEDSCPDYML 222
Query: 156 QALQRCTEAQRTVFKACYGSSEPAHVERIK 185
++ + + + V + SSEP VE+++
Sbjct: 223 KSEECLKKERERVAHYLHSSSEPKLVEKVQ 252
>At3g20160.1 68416.m02556 geranylgeranyl pyrophosphate synthase,
putative / GGPP synthetase, putative /
farnesyltranstransferase, putative similar to
gi:2578821; similar to geranyl geranyl pyrophosphate
synthase GB:BAA23157 [Arabidopsis thaliana]
Length = 344
Score = 30.7 bits (66), Expect = 2.8
Identities = 22/79 (27%), Positives = 39/79 (49%), Gaps = 3/79 (3%)
Query: 95 LGLLLAENVDEKIYKSAQDICLEIGTMFQIQDDFIDCFGDEIKTGK-VGTDIQERKCTWL 153
+G ++ DE+I + + IG MFQ+ DD +D + GK G D+ K T+
Sbjct: 240 MGAIMGGGSDEEIER-LRSYARCIGLMFQVVDDVLDVTKSSEELGKTAGKDLIAGKLTYP 298
Query: 154 AVQALQRCTE-AQRTVFKA 171
+ +++ E A+R +A
Sbjct: 299 RLMGVEKSKEYAERLNIEA 317
>At5g60740.1 68418.m07621 ABC transporter family protein similar to
ATP-binding cassette, sub-family G, member 2
(Placenta-specific ATP- binding cassette transporter)
(Breast cancer resistance protein) SP:Q9UNQ0 from [Homo
sapiens]
Length = 1061
Score = 30.3 bits (65), Expect = 3.8
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 443 YSIKLPVVLGLILTQNRENAPIEDIEGICF 472
+S+ LPVVL LI T +N ++ I +C+
Sbjct: 1014 WSVLLPVVLTLIATSTNDNKIVDSISELCY 1043
>At2g29440.1 68415.m03577 glutathione S-transferase, putative
Length = 223
Score = 30.3 bits (65), Expect = 3.8
Identities = 14/33 (42%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 260 AWKGIIDNLTTNKKFTQLPELGSWVKKVLEYNV 292
AW+G+ + T KKF PE WVKK+ E +
Sbjct: 169 AWEGMGVEMITEKKF---PEYNKWVKKLKEVEI 198
>At5g51030.1 68418.m06326 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 314
Score = 29.9 bits (64), Expect = 5.0
Identities = 22/72 (30%), Positives = 30/72 (41%), Gaps = 4/72 (5%)
Query: 279 ELGSWVKKVLEYNVKGGKKIRGITTVLAYELFEKPENVTEEMVRLARVAGWCTEMLQAYL 338
E G W +Y+V + T VLA EL E+PE E++ GW + Y
Sbjct: 222 ESGGWPHSFTDYSVSK-MAVNAYTRVLAKELSERPEG--EKIYANCFCPGWVKTAMTGY- 277
Query: 339 IMNDDIMDGSST 350
N DG+ T
Sbjct: 278 AGNVSAEDGADT 289
>At4g22165.1 68417.m03204 F-box family protein contains F-box domain
Pfam:PF00646
Length = 363
Score = 29.5 bits (63), Expect = 6.6
Identities = 14/41 (34%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 215 IPIEAARVLFKKLLDITFQSAGCRCSSAYAASVSQIAKERE 255
+P++ ++FK+L + FQ A CS+ Y+ S Q ER+
Sbjct: 13 LPLDLLNLVFKRLSLVNFQRAKSVCSTRYSVS-RQCVPERQ 52
>At1g27340.1 68414.m03330 F-box family protein contains Pfam
PF00646: F-box domain; similar to fim protein; similar
to ESTs gb|T42445, gb|T76780, gb|AA650733, and
emb|Z17748
Length = 467
Score = 29.5 bits (63), Expect = 6.6
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 261 WKGIIDNLTTNKKFTQLPELGSWVKKVLEYNVKGGK 296
W +ID+ + ++ FT+LP+ W + NV G+
Sbjct: 147 WNALIDSDSFSRCFTELPQTIPWFYTITHENVNSGQ 182
>At5g56360.1 68418.m07034 calmodulin-binding protein similar to
alpha glucosidase II beta subunit from GI:2104691 [Mus
musculus]
Length = 647
Score = 29.1 bits (62), Expect = 8.7
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 4/32 (12%)
Query: 104 DEKIYKSAQDICLEIG----TMFQIQDDFIDC 131
DEK YKS+ +I + G T Q+ DDF DC
Sbjct: 44 DEKYYKSSSEIKCKDGSKKFTKAQLNDDFCDC 75
>At4g20320.1 68417.m02967 CTP synthase, putative / UTP--ammonia
ligase, putative similar to SP|P17812 CTP synthase (EC
6.3.4.2) (UTP--ammonia ligase) {Homo sapiens}; contains
Pfam profile PF00117: glutamine amidotransferase class-I
Length = 563
Score = 29.1 bits (62), Expect = 8.7
Identities = 24/91 (26%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 298 IRGITTVLAYELFEKPENVTEEM---VRLARVAGWCTEMLQAYLIMNDDIMDGSSTRRG- 353
+ G+ A E + +T+++ VR+A V G TE+L +YL ++ ++ S RR
Sbjct: 272 LEGVAKEPALEEWSLMAKMTDKLHVPVRIA-VVGKYTELLDSYLSIHKALLHASVARRKK 330
Query: 354 -VPCWYRMPDVGLGAINDAILVYGSIYEILK 383
+ W D+ GA + Y + +++LK
Sbjct: 331 LIIDWISASDLEQGAKKENPDAYKAAWKLLK 361
Database: arabidopsis
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.320 0.136 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,390,748
Number of Sequences: 28952
Number of extensions: 556123
Number of successful extensions: 1465
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 1437
Number of HSP's gapped (non-prelim): 45
length of query: 592
length of database: 12,070,560
effective HSP length: 85
effective length of query: 507
effective length of database: 9,609,640
effective search space: 4872087480
effective search space used: 4872087480
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 62 (29.1 bits)
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