Last updated: 2022/11/18
BLASTP 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BGIBMGA001926-TA|BGIBMGA001926-PA|IPR000092|Polyprenyl
synthetase, IPR008949|Terpenoid synthase
(427 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC6F12.13c |fps1||geranyltranstransferase Fps1|Schizosaccharom... 260 4e-70
SPBC36.06c |spo9||farnesyl pyrophosphate synthetase|Schizosaccha... 205 8e-54
SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomy... 33 0.10
SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1 |Sc... 30 0.71
SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner me... 29 1.6
SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase s... 29 1.6
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 28 2.9
SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation... 27 5.0
SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces pomb... 27 6.6
SPCC1322.14c |vtc4||vacuolar transporter chaperone |Schizosaccha... 26 8.8
SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces pombe... 26 8.8
>SPAC6F12.13c |fps1||geranyltranstransferase
Fps1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 347
Score = 260 bits (636), Expect = 4e-70
Identities = 128/343 (37%), Positives = 208/343 (60%), Gaps = 4/343 (1%)
Query: 87 DQSREFMAVFPDIVRDLTETGKHIDVPE-ASKWLAKLLQYNVPNGKKNRGLATILAYKML 145
D+ +F + P V ++ K I++P+ ++W L +N GK NRGL+ I +Y++L
Sbjct: 5 DKRAKFESALPVFVDEIVNYLKTINIPDDVTEWYKNSLFHNTLGGKYNRGLSVIDSYEIL 64
Query: 146 EKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGIND 205
L + A V+GW VE+ + L+ +DIM+ + RRG PCW+ P VG IND
Sbjct: 65 -LGHPLDEAAYMKAAVLGWMVELLQSFFLIADDIMDASKTRRGQPCWYLMPGVGNIAIND 123
Query: 206 AALIQSAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLFTME 265
A +++SA+Y LK+HF + Y ++E F+++ + +G + L D DLS F+++
Sbjct: 124 AFMVESAIYFLLKKHFRQESCYVDLIELFHDVTFQTELGQQLDLLTAPEDSVDLSKFSLQ 183
Query: 266 KYEAITKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGD 325
K+ I YKT++Y+F +PV+LA+ + GV PE + A+ IL+ +G++FQ+QDD+LDC+GD
Sbjct: 184 KHSFIVIYKTAFYSFYLPVALAMHLAGVATPENLKCAQDILIILGKYFQVQDDYLDCYGD 243
Query: 326 PTVTEKYGTDIQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLP 385
PTVT K GTDI D KC+W+ +AL + TP Q+ I++DNYG E+ R+K ++EEL +
Sbjct: 244 PTVTGKIGTDILDNKCSWIINLALAKCTPEQRVILDDNYGRKDSESEKRVKAVFEELNIR 303
Query: 386 HTYSVFEETTYDLLRTQIQQV--TRGLPHELFFKILDNIFRRS 426
+ +EE+ ++ I V + GL +F L I++R+
Sbjct: 304 GEFENYEESEVSEIKKLIDGVDESTGLKKSIFTTFLGKIYKRN 346
>SPBC36.06c |spo9||farnesyl pyrophosphate
synthetase|Schizosaccharomyces pombe|chr 2|||Manual
Length = 351
Score = 205 bits (501), Expect = 8e-54
Identities = 114/343 (33%), Positives = 187/343 (54%), Gaps = 6/343 (1%)
Query: 86 KDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATILAYKML 145
K + +F V + +R++ E+ ++ PE ++ L ++ N GK NRGLA + + L
Sbjct: 12 KKRLLDFFPVVLEGIREILESMQYF--PEETEKLLYSIKRNTLGGKNNRGLAVLQSLTSL 69
Query: 146 EKKENLTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGIND 205
+E L A ++GW +E+ L+ +DIM+ + RRG+ CW+ V IN+
Sbjct: 70 INRE-LEEAEFRDAALLGWLIEILQGCFLMADDIMDQSIKRRGLDCWYLVVGVR-RAINE 127
Query: 206 AALIQSAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDKPDLSLFTME 265
+ L+++ + ++++F + PYY +L+TF E+ +G L + + L F +
Sbjct: 128 SQLLEACIPLLIRKYFRNMPYYVDLLDTFREVTFLTELGQQEDLLSSRDGEASLRSFDLM 187
Query: 266 KYEAITKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFGD 325
KY+ I YKTS+Y+F +P+ ALL++ + + + + +G +FQ+QDD+LDCFGD
Sbjct: 188 KYDFIITYKTSFYSFYLPIKCALLLSRNSNQKAYDTTIKLSKLLGYYFQVQDDYLDCFGD 247
Query: 326 PTVTEKYGTDIQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYEELQLP 385
TV K G DIQD KCTWL A + A+ Q ++ +YG E IA IK LY ELQ+P
Sbjct: 248 YTVLGKVGMDIQDNKCTWLVCYAEKFASADQLNLLRAHYGKAGSENIAVIKQLYHELQIP 307
Query: 386 HTYSVFEETTYDLLRTQIQQV--TRGLPHELFFKILDNIFRRS 426
Y FE+ D + +I + + GL +F K I++RS
Sbjct: 308 ELYHKFEDDMVDSISKEIDLIDESTGLKKCIFTKFFQLIYKRS 350
>SPCC417.07c |mto1|mbo1, mod20|MT organizer Mto1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1115
Score = 32.7 bits (71), Expect = 0.10
Identities = 14/43 (32%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 214 YTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTDK 256
Y +L+ +F+S N ++ETF++ + CS+ H VQ++ D+
Sbjct: 766 YVTLRENFDS--LQNAIMETFDKQVTHCSVNHLVQQIRKLKDE 806
>SPAC1834.02 |aro1||pentafunctional aromatic polypeptide Aro1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1573
Score = 29.9 bits (64), Expect = 0.71
Identities = 31/98 (31%), Positives = 41/98 (41%), Gaps = 9/98 (9%)
Query: 305 ILLKMGEFFQIQDDFLDCFGDPTVTEKYGTDIQDGKCTWLAVVALQRATPAQKQIMEDNY 364
IL MG F Q+ L+ F P + G+ T V L A +I+ + +
Sbjct: 1241 ILFNMGRFGQLSR-ILNKFMTPVTHPLLPSKAAPGQLT---VKQLNEARVLIGEILPEKF 1296
Query: 365 GV-NKPEAIARIKDL----YEELQLPHTYSVFEETTYD 397
+ KP +R L YE L LPHTY FE T D
Sbjct: 1297 FLFGKPIKHSRSPILHSTAYELLGLPHTYEAFETDTVD 1334
>SPBP4H10.03 |oxa102|oxa1, oxa1-2, oxa1sp2|mitochondrial inner
membrane translocase Oxa102|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 409
Score = 28.7 bits (61), Expect = 1.6
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 75 MPMATRGLAVSKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWL--AKLLQYNVPNGKK 132
+P + V Q+ F+ F DIV + E GK+ P+AS+ L + L+ + N +K
Sbjct: 320 LPEVPSAMPVPNAQNESFVKSFTDIVHGVQEKGKY---PQASEILDATRFLKTDTNNEQK 376
Query: 133 NRGLATI 139
+TI
Sbjct: 377 PTNNSTI 383
>SPBPJ4664.01 |dps1|SPBPJ694.01|decaprenyl diphosphate synthase
subunit Dps1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 378
Score = 28.7 bits (61), Expect = 1.6
Identities = 53/232 (22%), Positives = 89/232 (38%), Gaps = 17/232 (7%)
Query: 151 LTPENILLANVMGWCVEMFHTHQLLLNDIMEGTTMRRGVPCWHRRPDVGLNGINDAALIQ 210
+ P + LA + EM H LL +D+++ +RRG P I I
Sbjct: 115 ILPSQLRLAQI----TEMIHIASLLHDDVIDHANVRRGSPS-SNVAFGNRRSILAGNFIL 169
Query: 211 SAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQ-KLMLKTDKPDLSLFTMEKYEA 269
+ T++ R N P +L T L++ G ++Q K + ++ + Y
Sbjct: 170 ARASTAMARLRN--PQVTELLATVIADLVR---GEFLQLKNTMDPSSLEIKQSNFDYYIE 224
Query: 270 ITKYKTSYYTFQMPVSLALLMTGVDDPETHRQAKTILLKMGEFFQIQDDFLDCFG-DPTV 328
+ KT+ + + +L G P A +G FQ+ DD LD D T+
Sbjct: 225 KSFLKTASLISKSCKASTIL--GQCSPTVATAAGEYGRCIGTAFQLMDDVLDYTSKDDTL 282
Query: 329 TEKYGTDIQDGKCTWLAVVALQRATPAQKQIMEDNYGVNKPEAIARIKDLYE 380
+ G D++ G T + A ++ I+ N P I R + L E
Sbjct: 283 GKAAGADLKLGLATAPVLFAWKKYPELGAMIVN---RFNHPSDIQRARSLVE 331
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 27.9 bits (59), Expect = 2.9
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 2/67 (2%)
Query: 328 VTEKYGTDIQDGKCTWLAVVALQRATPAQK--QIMEDNYGVNKPEAIARIKDLYEELQLP 385
+ + +GT + G + L R AQ Q++E YG NK + DL + P
Sbjct: 412 ILQYFGTLLDKGPLNEHETIELARPVLAQNRIQLLEKWYGENKLACTEALGDLVKPYNTP 471
Query: 386 HTYSVFE 392
++E
Sbjct: 472 FALKIYE 478
>SPAC1071.01c |pta1|SPAC4H3.15c|mRNA cleavage and polyadenylation
specificity factor complex subunit
Pta1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 670
Score = 27.1 bits (57), Expect = 5.0
Identities = 11/41 (26%), Positives = 23/41 (56%), Gaps = 1/41 (2%)
Query: 85 SKDQSREFMAVFPDIVRDLTETGKHIDVPEASKWLAKLLQY 125
++D + ++FP+IVR++ + D+ KW+A L +
Sbjct: 16 ARDIVKTDQSLFPEIVRNILSVANYSDI-RYKKWMANFLWF 55
>SPAC144.17c |||6-phosphofructo-2-kinase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 432
Score = 26.6 bits (56), Expect = 6.6
Identities = 22/97 (22%), Positives = 41/97 (42%), Gaps = 5/97 (5%)
Query: 196 PDVGLNGINDAALIQSAMYTSLKRHFNSKPYYNYVLETFNEMLMKCSMGHYVQKLMLKTD 255
PDV ++ + S M S+ F + + + +LM S G +QKL
Sbjct: 301 PDVSFKNLH----VLSCMEDSVMSPFRELGSVTSSMSSLSPILMD-SFGDDLQKLKETYG 355
Query: 256 KPDLSLFTMEKYEAITKYKTSYYTFQMPVSLALLMTG 292
+ + +L+ ++ Y K K S+Y + + +L G
Sbjct: 356 EEEYNLYLVDPYRYRVKRKESFYDLAVRLEPLILELG 392
>SPCC1322.14c |vtc4||vacuolar transporter chaperone
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 721
Score = 26.2 bits (55), Expect = 8.8
Identities = 16/57 (28%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 297 ETHRQAKTILLKMGEFFQIQDDFLDCF--GDPTVTEKYGTDIQDGKCTWLAVVALQR 351
+THR+ T + F +++ +++ F GD TV E + +DGK + + +L+R
Sbjct: 279 KTHREDWTGEKSVKARFPLKEKYVNAFLRGDYTVEEAFAKMRKDGKKSLKEIESLER 335
>SPBC106.14c |sda1||SDA1 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 719
Score = 26.2 bits (55), Expect = 8.8
Identities = 18/67 (26%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 83 AVSKDQSREFMAVFPDIVRDLTE--TGKHIDVPEASKWLAKLLQYNVPNGKKNRGLATIL 140
A+ + +R +A+ PD+++DLTE + K V AS+ L L + P+ K + +
Sbjct: 421 AIREVCARAPLAMTPDLLQDLTEYKSSKDKGVMMASRSLITLYREVAPDMLKRKDRGKLA 480
Query: 141 AYKMLEK 147
+ +M ++
Sbjct: 481 SIEMKDR 487
Database: spombe
Posted date: Oct 3, 2007 3:31 PM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.320 0.133 0.391
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,946,945
Number of Sequences: 5004
Number of extensions: 81094
Number of successful extensions: 265
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 258
Number of HSP's gapped (non-prelim): 11
length of query: 427
length of database: 2,362,478
effective HSP length: 75
effective length of query: 352
effective length of database: 1,987,178
effective search space: 699486656
effective search space used: 699486656
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.8 bits)
S2: 55 (26.2 bits)
- SilkBase 1999-2023 -